Clone Name	bah62k10
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	353	1e-97
2	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	352	4e-97
3	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	351	9e-97
4	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	347	1e-95
5	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	347	2e-95
6	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	302	4e-82
7	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	226	3e-59
8	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	219	3e-57
9	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	219	4e-57
10	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	215	6e-56
11	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	213	2e-55
12	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	209	6e-54
13	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	208	1e-53
14	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	208	1e-53
15	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	208	1e-53
16	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	208	1e-53
17	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	208	1e-53
18	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	207	1e-53
19	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	207	2e-53
20	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	207	2e-53
21	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	206	3e-53
22	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	206	3e-53
23	FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2...	205	6e-53
24	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	204	2e-52
25	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	204	2e-52
26	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	201	2e-51
27	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	199	4e-51
28	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	197	2e-50
29	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	197	2e-50
30	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	196	3e-50
31	FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2...	195	8e-50
32	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	194	1e-49
33	FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2...	194	1e-49
34	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	194	1e-49
35	FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2...	193	2e-49
36	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	191	1e-48
37	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	184	1e-46
38	FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.2...	182	6e-46
39	FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2...	181	1e-45
40	FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.2...	181	1e-45
41	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	176	3e-44
42	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	176	4e-44
43	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	175	9e-44
44	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	174	2e-43
45	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	171	1e-42
46	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	168	8e-42
47	AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as...	166	4e-41
48	YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)	160	2e-39
49	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	155	1e-37
50	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	149	4e-36
51	YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3....	149	4e-36
52	YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3....	148	1e-35
53	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	147	3e-35
54	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	144	2e-34
55	PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso...	114	1e-25
56	PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso...	111	1e-24
57	PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso...	111	1e-24
58	SAV_SULAC (Q07590) SAV protein	111	2e-24
59	CDCH_HALSA (Q9HPF0) Protein cdcH	110	4e-24
60	PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso...	109	5e-24
61	PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso...	108	8e-24
62	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	108	8e-24
63	VAT_THEAC (O05209) VCP-like ATPase	107	3e-23
64	Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156	106	5e-23
65	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	106	5e-23
66	PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteaso...	105	1e-22
67	PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Prote...	105	1e-22
68	PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S prote...	105	1e-22
69	PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S prote...	105	1e-22
70	PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso...	103	3e-22
71	PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso...	103	3e-22
72	PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteaso...	103	3e-22
73	PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso...	103	3e-22
74	PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog	103	3e-22
75	PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S prote...	102	6e-22
76	PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S prote...	102	6e-22
77	PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7	102	1e-21
78	CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48	101	1e-21
79	TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER...	101	2e-21
80	TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER...	101	2e-21
81	TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T...	101	2e-21
82	TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T...	101	2e-21
83	CDC48_YEAST (P25694) Cell division control protein 48	101	2e-21
84	PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteaso...	101	2e-21
85	TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h...	100	2e-21
86	PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog ...	100	3e-21
87	PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog ...	100	5e-21
88	PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog ...	100	5e-21
89	TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T...	99	6e-21
90	PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Prote...	99	8e-21
91	PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog ...	99	1e-20
92	TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h...	99	1e-20
93	PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease sub...	99	1e-20
94	PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 prot...	98	1e-20
95	CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B ...	98	1e-20
96	PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)	98	2e-20
97	PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 prot...	98	2e-20
98	PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 prot...	98	2e-20
99	FTSH_CHLVU (P56369) Cell division protein ftsH homolog	97	3e-20
100	CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h...	97	4e-20
101	CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val...	96	5e-20
102	PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (C...	96	5e-20
103	PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso...	96	9e-20
104	CD48A_ARATH (P54609) Cell division control protein 48 homolog A ...	95	1e-19
105	CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ...	95	1e-19
106	PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-bindi...	94	3e-19
107	PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-bin...	94	3e-19
108	PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxi...	93	5e-19
109	PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-bin...	93	5e-19
110	CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog	93	6e-19
111	YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)	92	8e-19
112	PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-b...	92	8e-19
113	PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4	92	1e-18
114	PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome ...	92	1e-18
115	PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome ...	92	1e-18
116	PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasom...	92	1e-18
117	PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasom...	92	1e-18
118	PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasom...	92	1e-18
119	PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homo...	92	1e-18
120	PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S1...	91	2e-18
121	PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote...	91	2e-18
122	PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote...	91	2e-18
123	PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote...	91	2e-18
124	PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso...	91	2e-18
125	PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-bindi...	91	3e-18
126	PRS8_DROME (O18413) 26S protease regulatory subunit 8	90	4e-18
127	PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 pro...	90	4e-18
128	TBP7_YEAST (P40340) TAT-binding homolog 7	89	7e-18
129	CDAT_PLAF7 (P46468) Putative cell division cycle ATPase	89	9e-18
130	PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (S...	89	1e-17
131	PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-bin...	89	1e-17
132	PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxi...	88	1e-17
133	PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (...	88	1e-17
134	PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (P...	88	2e-17
135	RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7	87	2e-17
136	PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A	87	2e-17
137	PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (T...	87	3e-17
138	NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nucl...	86	9e-17
139	PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (T...	85	1e-16
140	PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (T...	85	1e-16
141	NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	83	5e-16
142	AFG2_YEAST (P32794) Protein AFG2	82	8e-16
143	NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	82	8e-16
144	NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	82	8e-16
145	NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	82	8e-16
146	NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nucl...	82	8e-16
147	NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleim...	82	1e-15
148	SEC18_CANAL (P34732) Vesicular-fusion protein SEC18	81	2e-15
149	TBP7_CAEEL (P54816) TAT-binding homolog 7	80	3e-15
150	PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Pro...	80	3e-15
151	PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (P...	80	3e-15
152	PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (P...	80	3e-15
153	PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (P...	80	4e-15
154	NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	80	4e-15
155	SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog	80	5e-15
156	PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)	79	1e-14
157	PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)	79	1e-14
158	PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4	78	2e-14
159	PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	77	3e-14
160	NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleim...	77	4e-14
161	PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-b...	76	6e-14
162	ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2	76	7e-14
163	SEC18_YEAST (P18759) Vesicular-fusion protein SEC18	76	7e-14
164	CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ...	75	1e-13
165	PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	75	1e-13
166	PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-bindi...	75	1e-13
167	PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)...	75	1e-13
168	ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2	75	1e-13
169	PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (P...	75	1e-13
170	ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2	75	1e-13
171	KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3...	74	3e-13
172	PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)	74	4e-13
173	PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	74	4e-13
174	PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)	73	5e-13
175	PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	73	5e-13
176	PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog	72	8e-13
177	MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC ...	72	8e-13
178	PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	72	1e-12
179	PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)	72	1e-12
180	PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxiso...	72	1e-12
181	KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E...	72	1e-12
182	PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B	72	1e-12
183	PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)...	72	1e-12
184	PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog ...	71	2e-12
185	PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)	71	2e-12
186	KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like ...	70	3e-12
187	PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)	70	4e-12
188	PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	70	4e-12
189	KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-lik...	70	4e-12
190	PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog	70	5e-12
191	KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-lik...	69	9e-12
192	KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ...	69	9e-12
193	KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E...	69	9e-12
194	KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3...	69	9e-12
195	PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase ...	69	9e-12
196	KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3...	69	1e-11
197	PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog ...	69	1e-11
198	PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)	68	2e-11
199	PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)	67	3e-11
200	ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein...	67	3e-11
201	PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog	67	3e-11
202	PRS2_METJA (Q58889) Putative 26S protease regulatory subunit hom...	67	3e-11
203	AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)	67	3e-11
204	PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog ...	65	1e-10
205	PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog	65	2e-10
206	ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1	64	4e-10
207	ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1	64	4e-10
208	ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1	64	4e-10
209	PRS2_METTH (O27092) Putative 26S protease regulatory subunit hom...	62	1e-09
210	PRS2_METTM (P42811) Putative 26S protease regulatory subunit hom...	59	9e-09
211	VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)	59	9e-09
212	MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)	58	2e-08
213	VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)	57	3e-08
214	ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein...	57	5e-08
215	VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a	57	5e-08
216	VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) ...	57	5e-08
217	VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants	55	1e-07
218	Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c	55	2e-07
219	Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175	55	2e-07
220	Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316	55	2e-07
221	SPAST_HUMAN (Q9UBP0) Spastin	54	4e-07
222	SPAST_MOUSE (Q9QYY8) Spastin	54	4e-07
223	VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein ...	53	5e-07
224	TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-bind...	53	7e-07
225	YCF2_ANTFO (Q859W7) Protein ycf2	50	3e-06
226	YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)	50	3e-06
227	SAP1_YEAST (P39955) Protein SAP1	48	2e-05
228	YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46	47	5e-05
229	FTSH_POPEU (P84578) Cell division protein ftsH homolog, chloropl...	44	4e-04
230	YCX9_CHLRE (Q32065) Hypothetical 341.7 kDa protein in psbD-psbC ...	40	0.003
231	BCS1_YEAST (P32839) Mitochondrial chaperone BCS1	39	0.008
232	YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)	39	0.010
233	BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-...	37	0.050
234	BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like prot...	35	0.11
235	Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL	35	0.11
236	BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like prot...	35	0.15
237	BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like prot...	34	0.25
238	RECA_MYCTU (P0A5U4) Protein recA (Recombinase A) [Contains: Endo...	33	0.56
239	RECA_MYCBO (P0A5U5) Protein recA (Recombinase A) [Contains: Endo...	33	0.56
240	C1TM_YEAST (P09440) C-1-tetrahydrofolate synthase, mitochondrial...	33	0.73
241	BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like prot...	32	0.95
242	ISPG_SYNP6 (Q5N3W3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ...	32	1.2
243	RL14_LUMRU (O46160) 60S ribosomal protein L14	32	1.6
244	PCDG8_PANTR (Q5DRB2) Protocadherin gamma A8 precursor (PCDH-gamm...	32	1.6
245	STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Pro...	31	2.1
246	QUEA_THIDA (Q3SH62) S-adenosylmethionine:tRNA ribosyltransferase...	31	2.1
247	SYI_GLOVI (Q7NF75) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole...	30	3.6
248	PCDG8_HUMAN (Q9Y5G5) Protocadherin gamma A8 precursor (PCDH-gamm...	30	3.6
249	PRP5_YEAST (P21372) Pre-mRNA-processing ATP-dependent RNA helica...	30	4.7
250	ISPG_SYNPX (Q7U712) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ...	30	4.7
251	STRN_SORMA (Q70M86) Striatin Pro11	30	6.1
252	ISPG_SYNY3 (P73672) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ...	30	6.1
253	Y1225_ARCFU (O29043) Hypothetical protein AF1225 precursor	30	6.1
254	EAE_CITFR (Q07591) Intimin (Attaching and effacing protein) (Eae...	29	8.0
255	NMNA2_MOUSE (Q8BNJ3) Nicotinamide mononucleotide adenylyltransfe...	29	8.0
256	NMNA2_HUMAN (Q9BZQ4) Nicotinamide mononucleotide adenylyltransfe...	29	8.0
257	ISPG_SYNEL (Q8DK70) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ...	29	8.0
258	RPOC_GLUOX (Q5FTX8) DNA-directed RNA polymerase beta' chain (EC ...	29	8.0
259	VE2_HPV05 (P06921) Regulatory protein E2	29	8.0
260	SYA_PROAC (Q6A8I8) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	29	8.0
261	CIZ1_HUMAN (Q9ULV3) Cip1-interacting zinc finger protein (Nuclea...	29	8.0
262	RPOB_PARUW (Q6MDM1) DNA-directed RNA polymerase beta chain (EC 2...	29	8.0

---

>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score =  353 bits (907), Expect = 1e-97
 Identities = 180/187 (96%), Positives = 186/187 (99%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG+FDRQVTVDRPDVAGRVRIL+VHSRGK
Sbjct: 357 LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGK 416

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           ALAKDVDFDK+ARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK
Sbjct: 417 ALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 476

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
           KNAVVS++K+KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFA SEERLESG
Sbjct: 477 KNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 536

Query: 543 LYSRSYL 563
           LYSRSYL
Sbjct: 537 LYSRSYL 543

---

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score =  352 bits (903), Expect = 4e-97
 Identities = 179/187 (95%), Positives = 185/187 (98%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV+IL+VHSRGK
Sbjct: 380 LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGK 439

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           ALAKDVDFDK+ARRTPGFTG DLQNLMNEAAILAARRDLKEISKDEI+DALERIIAGPEK
Sbjct: 440 ALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALERIIAGPEK 499

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
           KNAVVSE+K+KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFA SEERLESG
Sbjct: 500 KNAVVSEEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 559

Query: 543 LYSRSYL 563
           LYSRSYL
Sbjct: 560 LYSRSYL 566

---

>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score =  351 bits (900), Expect = 9e-97
 Identities = 179/187 (95%), Positives = 185/187 (98%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV+IL+VHSRGK
Sbjct: 389 LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGK 448

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           AL KDVDFDKVARRTPGFTGADLQNLMNEAAILAARR+LKEISKDEISDALERIIAGPEK
Sbjct: 449 ALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEK 508

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
           KNAVVSE+K++LVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFA SEERLESG
Sbjct: 509 KNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 568

Query: 543 LYSRSYL 563
           LYSRSYL
Sbjct: 569 LYSRSYL 575

---

>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score =  347 bits (891), Expect = 1e-95
 Identities = 175/187 (93%), Positives = 185/187 (98%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR++IL+VHSRGK
Sbjct: 380 LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGK 439

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           AL KDVDF+K+ARRTPG+TGADLQNLMNEAAILAARR+LKEISKDEISDALERIIAGPEK
Sbjct: 440 ALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEK 499

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
           KNAVVS++K+KLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFA SEERLESG
Sbjct: 500 KNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 559

Query: 543 LYSRSYL 563
           LYSRSYL
Sbjct: 560 LYSRSYL 566

---

>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score =  347 bits (889), Expect = 2e-95
 Identities = 176/187 (94%), Positives = 185/187 (98%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV+IL+VHSRGK
Sbjct: 377 LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGK 436

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           A+ KDVD++KVARRTPGFTGADLQNLMNEAAILAARR+LKEISKDEISDALERIIAGPEK
Sbjct: 437 AIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEK 496

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
           KNAVVSE+K++LVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFA SEERLESG
Sbjct: 497 KNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 556

Query: 543 LYSRSYL 563
           LYSRSYL
Sbjct: 557 LYSRSYL 563

---

>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score =  302 bits (774), Expect = 4e-82
 Identities = 145/187 (77%), Positives = 171/187 (91%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDGF GN+G+I++AATNRPDVLDSAL+RPGRFDRQV VDRPD AGR  IL VH+RGK
Sbjct: 288 LTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGK 347

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L++DVD DK+ARRTPGFTGADL NL+NEAAILAARR+L EIS DE++DA++R++AGPEK
Sbjct: 348 TLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDRVLAGPEK 407

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
           KN V+SE+++ LVAYHEAGHALVGALMP+YDPV KISIIPRG+AGGLT+F  SE+R+ESG
Sbjct: 408 KNRVMSEKRKTLVAYHEAGHALVGALMPDYDPVQKISIIPRGRAGGLTWFTPSEDRMESG 467

Query: 543 LYSRSYL 563
           LYSRSYL
Sbjct: 468 LYSRSYL 474

---

>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score =  226 bits (577), Expect = 3e-59
 Identities = 115/187 (61%), Positives = 146/187 (78%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDGF GN+G+I++AATNRPDVLDSAL+RPGRFDRQV VD PD +GR  ILEVH+R K
Sbjct: 299 LTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNK 358

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            LA +V  D +ARRTPGF+GADL NL+NEAAIL ARR    I+  EI DA++R++AG E 
Sbjct: 359 KLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGMEG 418

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
              V S+ KR L+AYHE GHA+VG L+ ++DPV K+++IPRGQA GLT+F  +EE+   G
Sbjct: 419 TPLVDSKSKR-LIAYHEVGHAIVGTLLKDHDPVQKVTLIPRGQAQGLTWFTPNEEQ---G 474

Query: 543 LYSRSYL 563
           L +++ L
Sbjct: 475 LTTKAQL 481

---

>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score =  219 bits (559), Expect = 3e-57
 Identities = 109/187 (58%), Positives = 145/187 (77%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDGF GN+G+I++AATNR DVLD+ALLRPGRFDRQVTVD PDV GR+ IL VH+R K
Sbjct: 300 LTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNK 359

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L   +  + +A+RTPGF+GADL NL+NEAAIL ARR  K+I+  EI  +++R+IAG E 
Sbjct: 360 KLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRKKQITISEIDASIDRVIAGMEG 419

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
           K A+V  + ++L+AYHE GHA++G L+  +DPV K++++PRGQA GLT+F  SE++    
Sbjct: 420 K-ALVDSKTKRLIAYHEVGHAIIGTLLKHHDPVQKVTLVPRGQAKGLTWFTPSEDQ---S 475

Query: 543 LYSRSYL 563
           L SRS +
Sbjct: 476 LISRSQI 482

---

>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score =  219 bits (558), Expect = 4e-57
 Identities = 109/176 (61%), Positives = 137/176 (77%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDGF GNSG+IV+AATNRPDVLD ALLRPGRFDRQVTVD PDV GR  IL +H++ K
Sbjct: 338 LTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNK 397

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L ++V    +ARRTPGFTGADL N++NEAAI  ARR  + I+  E++DA++R++AG E 
Sbjct: 398 KLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEAITMAEVNDAIDRVVAGMEG 457

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEER 530
              V S+ KR L+AYHE GHAL+G L P +DPV K+++IPRGQA GLT+F   E++
Sbjct: 458 TPLVDSKSKR-LIAYHEVGHALIGTLCPGHDPVEKVTLIPRGQAQGLTWFTPDEDQ 512

---

>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  215 bits (548), Expect = 6e-56
 Identities = 100/176 (56%), Positives = 137/176 (77%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGFS N G+I++AATNR D+LD ALLRPGRFDRQ+TVDRPDV GR  +L+VH+R K
Sbjct: 288 LVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNK 347

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L + V+   +A RTPGF+GADL+NL+NEAA++AAR++ K+I   +I +A +R+IAGP K
Sbjct: 348 PLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPAK 407

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEER 530
           K+ V+S+++R +VAYHE GH ++G ++ E D V K++I+PRGQAGG       E+R
Sbjct: 408 KSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVTIVPRGQAGGYAVMLPREDR 463

---

>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score =  213 bits (543), Expect = 2e-55
 Identities = 107/187 (57%), Positives = 142/187 (75%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDGF GN+GVIV+AATNR D+LDSALLRPGRFDRQV+VD PD  GR+ ILEVH++ K
Sbjct: 300 LTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNK 359

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            +   V  + +ARRTPGF+GADL NL+NEAAIL ARR    ++  EI  +++R++AG E 
Sbjct: 360 KMESKVSLETIARRTPGFSGADLANLLNEAAILTARRRKSAMTMSEIDTSIDRVVAGLEG 419

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
              + S+ KR L+AYHE GHA++G+L+  +DPV K+++IPRGQA GLT+F  S+++    
Sbjct: 420 TPLIDSKSKR-LIAYHEVGHAIIGSLLEHHDPVQKVTLIPRGQARGLTWFTPSDDQ---S 475

Query: 543 LYSRSYL 563
           L SRS +
Sbjct: 476 LISRSQI 482

---

>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score =  209 bits (531), Expect = 6e-54
 Identities = 99/176 (56%), Positives = 133/176 (75%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGFS N G+I++AATNR D+LD ALLRPGRFDRQ+ V+RPDV GR  +L+VH+R K
Sbjct: 293 LVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNK 352

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L  DV+   +A RTPGF+GADL+NL+NEAA++AAR D  +IS   I +A++R+IAGP K
Sbjct: 353 PLNDDVNLKTIATRTPGFSGADLENLLNEAALVAARHDHTKISMIHIEEAIDRVIAGPAK 412

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEER 530
           K+ V+S +++K+VA+HEAGH +VG  +   D V K++I+PRG AGG       E+R
Sbjct: 413 KSRVISPKEKKIVAWHEAGHTVVGVKLENADMVHKVTIVPRGMAGGYAVMLPKEDR 468

---

>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  208 bits (529), Expect = 1e-53
 Identities = 105/186 (56%), Positives = 139/186 (74%), Gaps = 7/186 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V  PDV GR +IL+VH R  
Sbjct: 279 LVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRV 338

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            LA D+D   +AR TPGF+GADL NL+NEAA+ AAR + + +S  E   A ++I+ G E+
Sbjct: 339 PLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF-------AXS 521
           ++ V++E +++  AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF       + S
Sbjct: 399 RSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISAS 458

Query: 522 EERLES 539
            ++LES
Sbjct: 459 RQKLES 464

---

>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  208 bits (529), Expect = 1e-53
 Identities = 105/186 (56%), Positives = 139/186 (74%), Gaps = 7/186 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V  PDV GR +IL+VH R  
Sbjct: 279 LVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRV 338

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            LA D+D   +AR TPGF+GADL NL+NEAA+ AAR + + +S  E   A ++I+ G E+
Sbjct: 339 PLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF-------AXS 521
           ++ V++E +++  AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF       + S
Sbjct: 399 RSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISAS 458

Query: 522 EERLES 539
            ++LES
Sbjct: 459 RQKLES 464

---

>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  208 bits (529), Expect = 1e-53
 Identities = 105/186 (56%), Positives = 139/186 (74%), Gaps = 7/186 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V  PDV GR +IL+VH R  
Sbjct: 279 LVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRV 338

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            LA D+D   +AR TPGF+GADL NL+NEAA+ AAR + + +S  E   A ++I+ G E+
Sbjct: 339 PLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF-------AXS 521
           ++ V++E +++  AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF       + S
Sbjct: 399 RSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISAS 458

Query: 522 EERLES 539
            ++LES
Sbjct: 459 RQKLES 464

---

>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  208 bits (529), Expect = 1e-53
 Identities = 105/186 (56%), Positives = 139/186 (74%), Gaps = 7/186 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V  PDV GR +IL+VH R  
Sbjct: 279 LVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRV 338

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            LA D+D   +AR TPGF+GADL NL+NEAA+ AAR + + +S  E   A ++I+ G E+
Sbjct: 339 PLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF-------AXS 521
           ++ V++E +++  AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF       + S
Sbjct: 399 RSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISAS 458

Query: 522 EERLES 539
            ++LES
Sbjct: 459 RQKLES 464

---

>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  208 bits (529), Expect = 1e-53
 Identities = 105/186 (56%), Positives = 139/186 (74%), Gaps = 7/186 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V  PDV GR +IL+VH R  
Sbjct: 279 LVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRV 338

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            LA D+D   +AR TPGF+GADL NL+NEAA+ AAR + + +S  E   A ++I+ G E+
Sbjct: 339 PLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF-------AXS 521
           ++ V++E +++  AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF       + S
Sbjct: 399 RSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISAS 458

Query: 522 EERLES 539
            ++LES
Sbjct: 459 RQKLES 464

---

>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score =  207 bits (528), Expect = 1e-53
 Identities = 102/168 (60%), Positives = 132/168 (78%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF  + G+IV+AATNRPD+LD ALLRPGRFDRQ+ + +PDV GR  IL+VH+R K
Sbjct: 283 LVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNK 342

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            LAKDVD + VAR TPGFTGADL+NL+NEAA+LAAR+  +EI+ +EI +AL+RI  G E+
Sbjct: 343 KLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEEALDRITMGLER 402

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT 506
           K   +S ++++ +A HEAGHAL+G +  + D V KISIIPRG A G+T
Sbjct: 403 KGMTISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIPRGMALGVT 450

---

>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score =  207 bits (527), Expect = 2e-53
 Identities = 101/177 (57%), Positives = 135/177 (76%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF GN G+IV+AATNR DVLD ALLRPGRFDR+V V RPDV GR  IL+VH++ K
Sbjct: 314 LIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNK 373

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            LA+DVD   VA++TPGF GADL+N++NEAA++AARR+   I   +I +A +R+IAGP K
Sbjct: 374 PLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSK 433

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERL 533
           K+  VS+++R+LVAYHEAGH +VG ++     V K++I+PRG+AGG       E+++
Sbjct: 434 KDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQM 490

---

>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score =  207 bits (527), Expect = 2e-53
 Identities = 101/177 (57%), Positives = 135/177 (76%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF GN G+IV+AATNR DVLD ALLRPGRFDR+V V RPDV GR  IL+VH++ K
Sbjct: 314 LIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNK 373

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            LA+DVD   VA++TPGF GADL+N++NEAA++AARR+   I   +I +A +R+IAGP K
Sbjct: 374 PLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSK 433

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERL 533
           K+  VS+++R+LVAYHEAGH +VG ++     V K++I+PRG+AGG       E+++
Sbjct: 434 KDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQM 490

---

>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score =  206 bits (525), Expect = 3e-53
 Identities = 105/188 (55%), Positives = 143/188 (76%), Gaps = 7/188 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGFSGN GVIV+AATNRPDVLD AL RPGRFDRQV V  PDV GR +IL+VH R  
Sbjct: 24  LVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKV 83

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           ++A+DVD   +AR TPG++GADL NL+NEAA+ AAR + + ++  E   A ++I  GPE+
Sbjct: 84  SVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPER 143

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF-------AXS 521
           +  ++++++++  AYHEAGHA+VG L+PE+DPV K++IIPRG+A G+TFF       + S
Sbjct: 144 RTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRGRALGVTFFLPEGDQISIS 203

Query: 522 EERLESGL 545
           +++LES L
Sbjct: 204 QKQLESKL 211

---

>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score =  206 bits (525), Expect = 3e-53
 Identities = 105/188 (55%), Positives = 143/188 (76%), Gaps = 7/188 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGFSGN GVIV+AATNRPDVLD AL RPGRFDRQV V  PDV GR +IL+VH R  
Sbjct: 278 LVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKV 337

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           ++A+DVD   +AR TPG++GADL NL+NEAA+ AAR + + ++  E   A ++I  GPE+
Sbjct: 338 SVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPER 397

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF-------AXS 521
           +  ++++++++  AYHEAGHA+VG L+PE+DPV K++IIPRG+A G+TFF       + S
Sbjct: 398 RTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRGRALGVTFFLPEGDQISIS 457

Query: 522 EERLESGL 545
           +++LES L
Sbjct: 458 QKQLESKL 465

---

>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score =  205 bits (522), Expect = 6e-53
 Identities = 108/187 (57%), Positives = 135/187 (72%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDGF GN+GVIV+AATNR DVLD+ALLRPGRFDRQ+ V  PDV  R+ IL+VH+  K
Sbjct: 281 LTEMDGFEGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQK 340

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L   V  + VARRT GF GADL NL+NEAAILA RR LK+I+  EI DA++R+IAG E 
Sbjct: 341 KLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVRRGLKQITWKEIDDAIDRVIAGME- 399

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
              ++  + ++L+AYHE GHAL   L+P + PV K+++IPR QA GLT+F    ER    
Sbjct: 400 GTPIMDGKIKRLIAYHETGHALTATLLPNHPPVQKVTLIPRRQAKGLTWFMQDNER---D 456

Query: 543 LYSRSYL 563
           L S+S L
Sbjct: 457 LLSKSQL 463

---

>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score =  204 bits (518), Expect = 2e-52
 Identities = 104/176 (59%), Positives = 135/176 (76%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDGFSG++GVIV+AATNR DVLDSALLRPGRFDRQ+ V  P++ GR+ IL+VHS+ K
Sbjct: 298 LTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKK 357

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            + KDV  + +ARRTPGF+GADL NL+NEAAIL  RR   EI+  EI D++++IIAG E 
Sbjct: 358 KIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEIEDSIDKIIAGLEG 417

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEER 530
                S  KR L+AYHEAGHA+    +P +DPV K+++IPR QA GLT+F  ++++
Sbjct: 418 SPLADSRIKR-LIAYHEAGHAVAATFLPHHDPVQKVTLIPRRQAKGLTWFLPNDDQ 472

---

>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score =  204 bits (518), Expect = 2e-52
 Identities = 105/178 (58%), Positives = 138/178 (77%), Gaps = 2/178 (1%)
 Frame = +3

Query: 3   LTEMDGFSG-NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 179
           LTEMDGFS   + VIVLAATNRP+ LD ALLRPGRFDRQV VDRPD+AGR++ILE++++ 
Sbjct: 302 LTEMDGFSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAGRLKILEIYAKK 361

Query: 180 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 359
             L K+V+   +A RTPGF GADL NL+NEAA+LAAR     +++ +  +A+ER++AG E
Sbjct: 362 IKLDKEVELKNIATRTPGFAGADLANLVNEAALLAARNKQDSVTEADFREAIERVVAGLE 421

Query: 360 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAXSEER 530
           KK+ V+S++++K+VAYHE GHALVGA+MP    VAKISI+PRG A  G T    +E+R
Sbjct: 422 KKSRVLSDKEKKIVAYHEVGHALVGAVMPGGGQVAKISIVPRGMAALGYTLQMPTEDR 479

---

>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score =  201 bits (510), Expect = 2e-51
 Identities = 101/186 (54%), Positives = 138/186 (74%), Gaps = 7/186 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF GN G+I++AATNRPDVLD ALLRPGRFDRQV V  PD+ GR +IL+VH R  
Sbjct: 279 LVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRKV 338

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L+KDVD   +AR TPGF+GADL NL+NEAA+ AAR D + +S  E   A ++++ G E+
Sbjct: 339 PLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEFERAKDKMMMGSER 398

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF-------AXS 521
           ++ V+S+ +++  AYHEAGH ++G L+P++DP  K++IIPRG+A G+TFF       + S
Sbjct: 399 RSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGRALGVTFFLPESDTLSIS 458

Query: 522 EERLES 539
            ++LES
Sbjct: 459 RQKLES 464

---

>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score =  199 bits (506), Expect = 4e-51
 Identities = 102/186 (54%), Positives = 137/186 (73%), Gaps = 7/186 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF GN GVI++AATNRPDVLD ALLRPGRFDRQV V  PDV GR +IL+VH R  
Sbjct: 279 LVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKV 338

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L++DVD   +AR TPGF+GADL NL+NEAA+ AAR + + +S      A ++I+ G E+
Sbjct: 339 PLSEDVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSER 398

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF-------AXS 521
           ++ V+S+ +++  AYHEAGH ++G L+P++DP  K++IIPRGQA G+TFF       + S
Sbjct: 399 RSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGQALGITFFLPESDILSIS 458

Query: 522 EERLES 539
            ++LES
Sbjct: 459 RQKLES 464

---

>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  197 bits (500), Expect = 2e-50
 Identities = 94/185 (50%), Positives = 131/185 (70%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF   +GVI++AATNRPD+LD ALLRPGRFDRQ+ V  PD+AGR  +L VHS+GK
Sbjct: 290 LVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGK 349

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            +A D D D +A+RT G TGADL N++NEAA+L AR +   I+   + +A++R+I GP +
Sbjct: 350 PMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRR 409

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
           K  ++SEQ++K+ AYHE GH L    MP+ +P+ K++I+ RG+ GG       E++   G
Sbjct: 410 KGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK---G 466

Query: 543 LYSRS 557
           L +RS
Sbjct: 467 LRTRS 471

---

>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  197 bits (500), Expect = 2e-50
 Identities = 94/185 (50%), Positives = 131/185 (70%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF   +GVI++AATNRPD+LD ALLRPGRFDRQ+ V  PD+AGR  +L VHS+GK
Sbjct: 290 LVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGK 349

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            +A D D D +A+RT G TGADL N++NEAA+L AR +   I+   + +A++R+I GP +
Sbjct: 350 PMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRR 409

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
           K  ++SEQ++K+ AYHE GH L    MP+ +P+ K++I+ RG+ GG       E++   G
Sbjct: 410 KGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK---G 466

Query: 543 LYSRS 557
           L +RS
Sbjct: 467 LRTRS 471

---

>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score =  196 bits (499), Expect = 3e-50
 Identities = 94/185 (50%), Positives = 131/185 (70%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF   +GVI++AATNRPD+LD ALLRPGRFDRQ+ V  PD+AGR  +L VHS+GK
Sbjct: 290 LVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGK 349

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            +A D D D +A+RT G TGADL N++NEAA+L AR +   I+   + +A++R+I GP +
Sbjct: 350 PIADDADLDGLAKRTVGMTGADLANVVNEAALLTARENGLVITGPALEEAVDRVIGGPRR 409

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
           K  ++SEQ++K+ AYHE GH L    MP+ +P+ K++I+ RG+ GG       E++   G
Sbjct: 410 KGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK---G 466

Query: 543 LYSRS 557
           L +RS
Sbjct: 467 LRTRS 471

---

>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score =  195 bits (495), Expect = 8e-50
 Identities = 91/176 (51%), Positives = 131/176 (74%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDG + N+G++++ ATNR DVLD ALLRPGRFDR +TV  PD+  R  IL++HS+GK
Sbjct: 339 LVEMDGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIKEREEILKLHSKGK 398

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L+K++ FDK+A+RTPG++GA L+N++NEA++L+ R     I   +I +A++R++AGP K
Sbjct: 399 RLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTDVIISTQIDEAIDRVMAGPAK 458

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEER 530
           K+ V+S+++ K VAYHEAGHA+VG  +   + V KI+IIPRG AGG       EE+
Sbjct: 459 KSRVISQEELKAVAYHEAGHAVVGLKVKGGNKVQKITIIPRGNAGGYNLMTPEEEK 514

---

>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score =  194 bits (494), Expect = 1e-49
 Identities = 93/177 (52%), Positives = 130/177 (73%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF GN G+I++AATNRPDVLD ALLRPGRFDRQ+ V  PD+ GR +I++VH +  
Sbjct: 279 LVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALPDIRGREKIIQVHMKKV 338

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L  +VD   +AR TPGF+GADL NL+NEAA+ AAR +   +   +   A ++I  G E+
Sbjct: 339 PLGNNVDPMIIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSDFESAKDKITMGSER 398

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERL 533
           ++ V++E++++  AYHEAGH +VG L+PE+DP  K++IIPRG+A G+TFF   ++ L
Sbjct: 399 RSMVMTEKQKESTAYHEAGHVIVGRLVPEHDPAHKVTIIPRGRALGVTFFLPKDDVL 455

---

>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score =  194 bits (494), Expect = 1e-49
 Identities = 96/168 (57%), Positives = 127/168 (75%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF+  +GV+V+AATNR DVLD ALLRPGRFDR + ++ PD+  R  IL+VH++ K
Sbjct: 355 LAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQVHAKNK 414

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L+  +    VA+RTPGF+GA L+N++NEA +LA R +   I+ ++I +A++R+IAGP K
Sbjct: 415 NLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDEAIDRVIAGPAK 474

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT 506
           K+ VVS+  RKLVAYHEAGHALVG  +   D V KI+IIPRGQAGG T
Sbjct: 475 KSRVVSDADRKLVAYHEAGHALVGLHVHSNDEVQKITIIPRGQAGGYT 522

---

>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score =  194 bits (493), Expect = 1e-49
 Identities = 104/187 (55%), Positives = 134/187 (71%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDGF  N GVIV+ ATNR D+LD+ALLRPGRFDRQVTV+ PD  GRV IL+VH+R K
Sbjct: 313 LTEMDGFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARNK 372

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L +DV   ++A RTPGF+GADL NL+NEAAILA R     I+K+E+++A +RII G   
Sbjct: 373 PLGEDVSLVQLANRTPGFSGADLANLLNEAAILATRYKKSSITKNEVNEAADRIIGGIAG 432

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLESG 542
                ++ KR L+AYHE GHA+ G+++  +D V KI++ PRG A GLT+F   E++    
Sbjct: 433 APMEDTKNKR-LIAYHEVGHAITGSVLKSHDEVEKITLTPRGGAKGLTWFTPEEDQ---S 488

Query: 543 LYSRSYL 563
           L SRS L
Sbjct: 489 LLSRSAL 495

---

>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score =  193 bits (491), Expect = 2e-49
 Identities = 95/168 (56%), Positives = 127/168 (75%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF+  +GV+V+AATNR DVLD ALLRPGRFDR + ++ PD+  R  IL+VH+  K
Sbjct: 358 LAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILKVHAENK 417

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L+  +    VA+RTPGF+GA L+N++NEA +LA R +   I+ ++I +A++R+IAGP K
Sbjct: 418 NLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTININDIDEAIDRVIAGPAK 477

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT 506
           K+ V+S++ RKLVAYHEAGHALVG  +   D V KI+IIPRGQAGG T
Sbjct: 478 KSRVISDEDRKLVAYHEAGHALVGLHVHSNDEVQKITIIPRGQAGGYT 525

---

>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score =  191 bits (485), Expect = 1e-48
 Identities = 96/180 (53%), Positives = 133/180 (73%), Gaps = 2/180 (1%)
 Frame = +3

Query: 3   LTEMDGFS--GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR 176
           L EMDGF   GNS VIV+AATNR DVLD ALLRPGRFDR+V V  PDV GR  +L+VH++
Sbjct: 320 LVEMDGFQDDGNS-VIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAK 378

Query: 177 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGP 356
            K LA DVD   VA +TPG+ GADL+N++NEAA++AAR++ KEI+  +I + ++R +AGP
Sbjct: 379 NKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKKEINAADIDEGMDRAMAGP 438

Query: 357 EKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEERLE 536
            KK+ + S ++R++VAYHEAGHA+VG ++     V K++++PRG+ GG       EE ++
Sbjct: 439 AKKDRIQSMREREIVAYHEAGHAIVGLVLENGSTVRKVTVVPRGRIGGYMLALPDEEIMQ 498

---

>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score =  184 bits (468), Expect = 1e-46
 Identities = 93/177 (52%), Positives = 126/177 (71%), Gaps = 1/177 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF   +G+I+LAATNRPDVLD ALLRPGRFDRQV VDRPD+ GR  IL +H++  
Sbjct: 267 LVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAILRIHAQNV 326

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            LA +VD   VAR T G++GADL N++NEAA+LA R    ++ + ++ +A+E+ + G +K
Sbjct: 327 KLAPEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETDLDEAVEKTMIGLQK 386

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRG-QAGGLTFFAXSEER 530
           K+ V+ E++R+++AYHE GHAL G      D V KI+IIPRG  A G TF    ++R
Sbjct: 387 KSRVIREEERRIIAYHETGHALAGTFTKGADKVHKITIIPRGTSALGYTFHIPEDDR 443

---

>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score =  182 bits (462), Expect = 6e-46
 Identities = 93/165 (56%), Positives = 123/165 (74%), Gaps = 1/165 (0%)
 Frame = +3

Query: 3   LTEMDGF-SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 179
           L EMDGF S N+ VIVLAATNRP++LD AL+RPGRFDRQV VD+PD  GRV IL+VH +G
Sbjct: 298 LAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKG 357

Query: 180 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 359
             LA DV+  +VA+ T G  GADL N++NEAA+LA R + KE+ +  + +A+ER IAG E
Sbjct: 358 VKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLE 417

Query: 360 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQA 494
           KK+  +S +++K+VAYHE+GHA++  +      V K+SIIPRG A
Sbjct: 418 KKSRRISPKEKKIVAYHESGHAVISEMTKGSTRVNKVSIIPRGMA 462

---

>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score =  181 bits (460), Expect = 1e-45
 Identities = 93/165 (56%), Positives = 122/165 (73%), Gaps = 1/165 (0%)
 Frame = +3

Query: 3   LTEMDGF-SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 179
           L EMDGF S N+ VIVLAATNRP++LD ALLRPGRFDRQV VD+PD  GRV IL+VH + 
Sbjct: 304 LAEMDGFGSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKPDFKGRVEILKVHIKP 363

Query: 180 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 359
             LA DVD  ++A+ T G  GADL N++NEAA+LA R + KE+ +  + +A+ER IAG E
Sbjct: 364 VKLANDVDLQEIAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLE 423

Query: 360 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQA 494
           KK+  +S +++K+VAYHE+GHA++  +      V K+SIIPRG A
Sbjct: 424 KKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMA 468

---

>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score =  181 bits (460), Expect = 1e-45
 Identities = 93/165 (56%), Positives = 123/165 (74%), Gaps = 1/165 (0%)
 Frame = +3

Query: 3   LTEMDGF-SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 179
           L EMDGF S N+ VIVLAATNRP++LD AL+RPGRFDRQV VD+PD  GRV IL+VH +G
Sbjct: 298 LAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKG 357

Query: 180 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 359
             LA DV+  +VA+ T G  GADL N++NEAA+LA R + KE+ +  + +A+ER IAG E
Sbjct: 358 VKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLE 417

Query: 360 KKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQA 494
           KK+  +S +++K+VAYHE+GHA++  +      V K+SIIPRG A
Sbjct: 418 KKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMA 462

---

>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  176 bits (447), Expect = 3e-44
 Identities = 88/188 (46%), Positives = 127/188 (67%), Gaps = 7/188 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF  N GV+++AATNRPDVLD ALLRPGRFDRQ+ V  PD+ GR +IL+VH +  
Sbjct: 282 LVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKI 341

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
                V    +AR TPGF+GA+L NL+NEAA++AAR   KE+   ++ +A ++++ G  +
Sbjct: 342 KYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVAR 401

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT-------FFAXS 521
           ++  +SE++++L AYHE GHALVG   P   P+ K +IIPRG A G+         ++ +
Sbjct: 402 RSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQN 461

Query: 522 EERLESGL 545
            E++ES +
Sbjct: 462 REQMESSI 469

---

>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  176 bits (446), Expect = 4e-44
 Identities = 88/188 (46%), Positives = 127/188 (67%), Gaps = 7/188 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF  N GV+++AATNRPDVLD ALLRPGRFDRQ+ V  PD+ GR +IL+VH +  
Sbjct: 282 LVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKI 341

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
                V    +AR TPGF+GA+L NL+NEAA++AAR   KE+   ++ +A ++++ G  +
Sbjct: 342 KYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVVR 401

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT-------FFAXS 521
           ++  +SE++++L AYHE GHALVG   P   P+ K +IIPRG A G+         ++ +
Sbjct: 402 RSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQN 461

Query: 522 EERLESGL 545
            E++ES +
Sbjct: 462 REQMESSI 469

---

>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score =  175 bits (443), Expect = 9e-44
 Identities = 88/181 (48%), Positives = 121/181 (66%), Gaps = 4/181 (2%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF+  + V++LA TNRPD+LD ALLRPGRFDRQ+ +  PD+ GR  I +VH R  
Sbjct: 435 LVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPL 494

Query: 183 ALAKDVDFDKVARR----TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 350
            L   ++ DK+AR+    TPGF+GAD+ N+ NEAA++AAR     I++     A+ER+I 
Sbjct: 495 KLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIG 554

Query: 351 GPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEER 530
           G EKK  V+  +++K VAYHEAGHA+ G  +   DP+ K+SIIPRG+  G   +   E+ 
Sbjct: 555 GLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQY 614

Query: 531 L 533
           L
Sbjct: 615 L 615

---

>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score =  174 bits (441), Expect = 2e-43
 Identities = 88/181 (48%), Positives = 121/181 (66%), Gaps = 4/181 (2%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF+  + V++LA TNRPD+LD ALLRPGRFDRQ+ +  PD+ GR  I +VH R  
Sbjct: 434 LVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPL 493

Query: 183 ALAKDVDFDKVARR----TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 350
            L   ++ DK+AR+    TPGF+GAD+ N+ NEAA++AAR     I++     A+ER+I 
Sbjct: 494 KLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVIG 553

Query: 351 GPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEER 530
           G EKK  V+  +++K VAYHEAGHA+ G  +   DP+ K+SIIPRG+  G   +   E+ 
Sbjct: 554 GLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQY 613

Query: 531 L 533
           L
Sbjct: 614 L 614

---

>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score =  171 bits (433), Expect = 1e-42
 Identities = 91/191 (47%), Positives = 122/191 (63%), Gaps = 4/191 (2%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR-- 176
           L EMDGF+ ++ V+VLA TNRPD+LD AL RPGRFDRQ+ +  PD+ GR  I +VH R  
Sbjct: 301 LVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPL 360

Query: 177 --GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 350
               +L+KD    K+A  TPGFTGAD+ N+ NEAA++AAR     + +     A+ER+I 
Sbjct: 361 KLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVIG 420

Query: 351 GPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEER 530
           G EKK  V+   ++  VAYHEAGHA+VG  +   DP+ K+SIIPRG+  G   +   E+ 
Sbjct: 421 GLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYAQYLPREQ- 479

Query: 531 LESGLYSRSYL 563
               LY+R  L
Sbjct: 480 ---FLYTREQL 487

---

>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score =  168 bits (426), Expect = 8e-42
 Identities = 84/166 (50%), Positives = 117/166 (70%), Gaps = 3/166 (1%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF+    V+VLA TNRPD+LD ALLRPGRFDR + +D+P++ GR  I  VH    
Sbjct: 476 LVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHL 535

Query: 183 ALAKDVDFD---KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAG 353
            LA ++ FD   ++A  TPGF+GAD+ N+ NEAA++AAR D   +  +    A+ER+I G
Sbjct: 536 KLAGEI-FDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIGG 594

Query: 354 PEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ 491
            E+K+ ++S +++K+VAYHEAGHA+ G  +   DP+ K+SIIPRGQ
Sbjct: 595 VERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQ 640

---

>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score =  166 bits (420), Expect = 4e-41
 Identities = 88/169 (52%), Positives = 116/169 (68%), Gaps = 6/169 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF+ +  V+VLA TNRPDVLD+AL+RPGRFDR + +D PDV GR +I  VH +  
Sbjct: 417 LVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRL 476

Query: 183 ALAKDVDFD------KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 344
            L   +  D      K+A  TPGFTGAD+ N  NEAA++AAR +   I+      A+ER+
Sbjct: 477 NLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERV 536

Query: 345 IAGPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ 491
           IAG EKK  V+S+++++ VAYHEAGHA+ G  +   DP+ K+SIIPRGQ
Sbjct: 537 IAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQ 585

---

>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score =  160 bits (405), Expect = 2e-39
 Identities = 81/175 (46%), Positives = 116/175 (66%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF    G+IVL ATN+ +VLD ALLRPGRFD Q+ V  P   GR+ +L ++ +  
Sbjct: 291 LAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKV 350

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
               ++D +K+A  T G+TGAD+QNL+N+AAI AA R+   +    + DA +R+I GP K
Sbjct: 351 KTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAAALRNDPFVEMHHLWDARDRLIMGPAK 410

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAXSEE 527
           +   + +Q  ++ A+HEAGHALV  L  +  P+ K++IIPRG+AGGLT F   ++
Sbjct: 411 RRP-LDDQTNRVSAFHEAGHALVALLTADSIPLHKVTIIPRGEAGGLTSFLQEKD 464

---

>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score =  155 bits (391), Expect = 1e-37
 Identities = 77/169 (45%), Positives = 111/169 (65%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L E+DGFS  SG+I++ ATN P+ LD AL RPGRFD+ V VD PDV GR  IL+ H +  
Sbjct: 405 LVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKI 464

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            LA +VD   +AR TPG +GA+L NL+N+AA+ A +++   +       A ++I+ G E+
Sbjct: 465 TLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAER 524

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTF 509
           K  V+++  RK  A+HEAGHA++        P+ K +I+PRG+A G+TF
Sbjct: 525 KTMVLTDAARKATAFHEAGHAIMAKYTNGATPLYKATILPRGRALGITF 573

---

>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score =  149 bits (377), Expect = 4e-36
 Identities = 73/166 (43%), Positives = 110/166 (66%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF  N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR  IL+ +    
Sbjct: 406 LAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKI 465

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
              K VD + +AR T GF+GA+L+NL+N+AA+ AA    + ++  E+  + ++I+ GPE+
Sbjct: 466 KFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPER 525

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGG 500
           ++  +  + + + AYHE+GHA++     +  P+ K +I+PRG   G
Sbjct: 526 RSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLG 571

---

>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score =  149 bits (377), Expect = 4e-36
 Identities = 73/166 (43%), Positives = 110/166 (66%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF  N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR  IL+ +    
Sbjct: 406 LAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKI 465

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
              K VD + +AR T GF+GA+L+NL+N+AA+ AA    + ++  E+  + ++I+ GPE+
Sbjct: 466 KFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPER 525

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGG 500
           ++  +  + + + AYHE+GHA++     +  P+ K +I+PRG   G
Sbjct: 526 RSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLG 571

---

>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score =  148 bits (373), Expect = 1e-35
 Identities = 72/166 (43%), Positives = 110/166 (66%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF  N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR  IL+ +    
Sbjct: 464 LAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKI 523

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
              + VD + +AR T GF+GA+L+NL+N+AA+ AA    + ++  E+  + ++I+ GPE+
Sbjct: 524 KFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPER 583

Query: 363 KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGG 500
           ++  +  + + + AYHE+GHA++     +  P+ K +I+PRG   G
Sbjct: 584 RSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLG 629

---

>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score =  147 bits (370), Expect = 3e-35
 Identities = 76/169 (44%), Positives = 112/169 (66%), Gaps = 1/169 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L+EMDGF+ N G+IV+AATNR D LD ALLRPGRFD +VTV +PD+AGRV I   +    
Sbjct: 326 LSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKI 385

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
             +  +D   +A+ + GFTGAD++N++N+AA+ AA  +  E++   + +A +R++ GP +
Sbjct: 386 VHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARDRVLMGPAR 445

Query: 363 KNA-VVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT 506
               +  E+  +  AYHEAGH LV     +  P+ K++IIPRGQ+ G T
Sbjct: 446 TGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTIIPRGQSLGHT 494

---

>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score =  144 bits (362), Expect = 2e-34
 Identities = 75/166 (45%), Positives = 106/166 (63%), Gaps = 2/166 (1%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDG      VIVLA+TNR D+LD AL+RPGR DR V +D P +  R  I E H +  
Sbjct: 437 LVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSL 496

Query: 183 ALAKDVDF--DKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGP 356
            L +   F   ++A  TPGF+GAD+ N+ NEAA+ AAR     +       A+ER++AG 
Sbjct: 497 KLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAGT 556

Query: 357 EKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQA 494
            KK+ ++S++++K+VA+HE+GHALVG ++   + V K+SI PR  A
Sbjct: 557 AKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNA 602

---

>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score =  114 bits (286), Expect = 1e-25
 Identities = 54/114 (47%), Positives = 77/114 (67%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF     + ++AATNRPDVLD A+LRPGRFDR V V  P +  R +IL++H    
Sbjct: 287 LAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKM 346

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 344
            LA+D+DF K+A+ T G +GADL+ +  EA + A RRD + +  +E  +A+E++
Sbjct: 347 TLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKV 400

---

>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score =  111 bits (278), Expect = 1e-24
 Identities = 60/136 (44%), Positives = 84/136 (61%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF     + V+AATNR D+LD ALLRPGRFDR + +  PD  GR  I ++H+R  
Sbjct: 307 LAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDM 366

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            LA+DVD  K+A+ T G +GAD++ +  EA ++A R D   ++ D+   A++R++    K
Sbjct: 367 NLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMG---K 423

Query: 363 KNAVVSEQKRKLVAYH 410
           K     E KR   AYH
Sbjct: 424 KEEESGEFKR---AYH 436

---

>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score =  111 bits (278), Expect = 1e-24
 Identities = 58/127 (45%), Positives = 84/127 (66%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L E+DGF     V ++AATNRPD+LD ALLRPGRFDR + V  P+  GR  IL++H+ G 
Sbjct: 279 LAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGM 338

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           ALA++VD + +AR T G +GADL+ +  EA + A R +  E++  +  DA+++I+ G EK
Sbjct: 339 ALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKIM-GVEK 397

Query: 363 KNAVVSE 383
           +     E
Sbjct: 398 EEEYKQE 404

---

>SAV_SULAC (Q07590) SAV protein|
          Length = 780

 Score =  111 bits (277), Expect = 2e-24
 Identities = 58/108 (53%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG  G   VIV+ ATNRPD +D AL RPGRFDR++ +  PD  GR  IL+VH+R  
Sbjct: 337 LTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNM 396

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR--DLKEISKDE 320
            +  DVD DK+A  T G+TGADL  L  EAAI A RR  D K+++ D+
Sbjct: 397 PITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDEKKLNLDQ 444



 Score =  101 bits (252), Expect = 1e-21
 Identities = 50/96 (52%), Positives = 66/96 (68%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDG    + V+++AATNRPD+LD ALLRPGRFDR + V  PD   R  IL+VH++  
Sbjct: 613 LAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNV 672

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAAR 290
            LA+DV  + +A +  G+TGADL+ L+ EA I A R
Sbjct: 673 PLAEDVSLEDIAEKAEGYTGADLEALVREATINAMR 708

---

>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score =  110 bits (274), Expect = 4e-24
 Identities = 61/130 (46%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG  G   VIV+AATNR D +D AL RPGRFDR++ +  PD  GR  IL++H+RG 
Sbjct: 314 LTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGM 373

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS---DALERIIAG 353
            L+ DV+   +A  T GF GAD+++L  EAA+ A RR L EI  DE       ++R+I  
Sbjct: 374 PLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLIDRMIVK 433

Query: 354 PEKKNAVVSE 383
            E     +SE
Sbjct: 434 REDFKGALSE 443



 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 49/98 (50%), Positives = 67/98 (68%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTE+DG      V+V+AATNRPD++D AL+R GRFDR V V +P + GR +IL++H++  
Sbjct: 588 LTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDT 647

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD 296
            LA DV   ++A R  G+ G+DL N+  EAAI A R D
Sbjct: 648 PLAADVSLRELAERADGYVGSDLANIAREAAIEALRDD 685

---

>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 430

 Score =  109 bits (273), Expect = 5e-24
 Identities = 58/135 (42%), Positives = 83/135 (61%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF     V ++ ATNRPD+LD A+LRPGRFDR + V  PD  GR+ IL++H+R  
Sbjct: 298 LAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKM 357

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            LA+DV+ +++A+ T G  GA+L+ +  EA + A R     ++ D+   A+E+I+   EK
Sbjct: 358 NLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIM---EK 414

Query: 363 KNAVVSEQKRKLVAY 407
           K   V E     V Y
Sbjct: 415 KKVKVKEPAHLDVLY 429

---

>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score =  108 bits (271), Expect = 8e-24
 Identities = 52/114 (45%), Positives = 75/114 (65%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF     + ++AATNRPDVLD A+LRPGRFDR V V  P +  R +IL++H    
Sbjct: 287 LAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKM 346

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 344
            LA D+DF K+A+ T G +GADL+ +  EA + A R+D   +  ++  +A+E++
Sbjct: 347 TLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKV 400

---

>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score =  108 bits (271), Expect = 8e-24
 Identities = 56/102 (54%), Positives = 69/102 (67%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L  MDG      VIV+AATNRPD +D AL RPGRFDR++ +  PD  GR  ILE+H+R  
Sbjct: 307 LALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKM 366

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 308
            LA+DVD +++A  T GF GADL+ L  EAA+ A RR L EI
Sbjct: 367 PLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEI 408



 Score =  105 bits (263), Expect = 7e-23
 Identities = 50/115 (43%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTE+DG      V+V+AATNRPD++D ALLRPGR +R + +  PD   RV I ++H RGK
Sbjct: 581 LTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGK 640

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE-ISKDEISDALERI 344
            LA DV+ +++A +T G++GAD++ +  EA +LA R  +K  ++++E  +A +++
Sbjct: 641 PLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKL 695

---

>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score =  107 bits (266), Expect = 3e-23
 Identities = 54/116 (46%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT +DG    +GV+V+ ATNRPD++D ALLR GRFD+ + +  PD   R+ IL+VH++  
Sbjct: 593 LTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNM 652

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR--DLKEISKDEISDALERI 344
            LA DVD + +A+RT G+ GADL+NL  EA + A R   D   +S+    DAL+ I
Sbjct: 653 PLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDALKTI 708



 Score = 89.4 bits (220), Expect = 7e-18
 Identities = 58/140 (41%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG      VIV+ ATNR D +D AL RPGRFDR++ +  PD  GR  IL +H+R  
Sbjct: 315 LTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNM 374

Query: 183 ALA-----KDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE--ISDALER 341
            L      K+   +++A  T GF GADL  L+ E+A+ A RR L EI  D+   ++ LE+
Sbjct: 375 PLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTEILEK 434

Query: 342 -IIAGPEKKNAVVSEQKRKL 398
            ++   + KNA+ S +   L
Sbjct: 435 MVVTEDDFKNALKSIEPSSL 454

---

>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score =  106 bits (264), Expect = 5e-23
 Identities = 61/148 (41%), Positives = 91/148 (61%), Gaps = 9/148 (6%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
            LTE+DG      V+V+AATNRPD++D ALLRPGR DR + V  PD   R+ I ++H+R  
Sbjct: 578  LTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSM 637

Query: 183  ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK-----EISKDEISDALERII 347
             LA+DV+ +++A++T G+TGAD++ L  EAA+LA R  +      E+   E+ + L+ I 
Sbjct: 638  NLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRESIGKPWDIEVKLRELINYLQSIS 697

Query: 348  ----AGPEKKNAVVSEQKRKLVAYHEAG 419
                A   + N+V+   K +  A  EAG
Sbjct: 698  GTFRAAAVELNSVIKATKERESA--EAG 723



 Score =  105 bits (263), Expect = 7e-23
 Identities = 55/102 (53%), Positives = 67/102 (65%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG  G   V+V+ ATNRP+ LD AL RPGRFDR++ +  PD  GR  IL++H+R  
Sbjct: 304 LTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNM 363

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 308
            LA+DVD D +A  T GF GADL  L  EAA+ A RR L  I
Sbjct: 364 PLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSI 405

---

>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score =  106 bits (264), Expect = 5e-23
 Identities = 54/121 (44%), Positives = 81/121 (66%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L E+DGF     V V+AATNR D++D A+LRPGRFDR + V  P + GR+ IL +H+R  
Sbjct: 267 LAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKA 326

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            +A DVD + +A+ T GF+GADL+ ++ EA   A RR  + I+ D++  A+E++ A  +K
Sbjct: 327 KMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEKVKAALDK 386

Query: 363 K 365
           +
Sbjct: 387 R 387

---

>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 397

 Score =  105 bits (261), Expect = 1e-22
 Identities = 59/123 (47%), Positives = 79/123 (64%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF     V V+AATNRPD+LD ALLRPGRFDR + V  PD  GR+ IL+VH+R K
Sbjct: 266 LAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTR-K 324

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
              K VD   +A  T G +GADL+ +  EA + A R     +++D+   A++++I G EK
Sbjct: 325 MNLKGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVI-GSEK 383

Query: 363 KNA 371
           + A
Sbjct: 384 RLA 386

---

>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome|
           regulatory subunit 1)
          Length = 411

 Score =  105 bits (261), Expect = 1e-22
 Identities = 53/116 (45%), Positives = 74/116 (63%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L+EMDGF     + ++AATNR D+LDSA+LRPGRFDR + V  P+   R RILE+H+   
Sbjct: 280 LSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPDARERILEIHAGEM 339

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 350
            +A  VDF  +A  T  F+GA L +L  EA + A R D  E+ + +  DA E+++A
Sbjct: 340 NVADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDRDEVHRQDFDDAYEKLVA 395

---

>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score =  105 bits (261), Expect = 1e-22
 Identities = 50/123 (40%), Positives = 78/123 (63%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           + ++DGF     + VL ATNRPD LD ALLRPGR DR+V    PD+ GR +I ++H+R  
Sbjct: 296 VNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTM 355

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
              +D+ F+ +AR  P  TGAD++++  EA + A R   K +++ +  DA+ ++I G +K
Sbjct: 356 NCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQK 415

Query: 363 KNA 371
            +A
Sbjct: 416 FSA 418

---

>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score =  105 bits (261), Expect = 1e-22
 Identities = 50/123 (40%), Positives = 78/123 (63%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           + ++DGF     + VL ATNRPD LD ALLRPGR DR+V    PD+ GR +I ++H+R  
Sbjct: 296 VNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTM 355

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
              +D+ F+ +AR  P  TGAD++++  EA + A R   K +++ +  DA+ ++I G +K
Sbjct: 356 NCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQK 415

Query: 363 KNA 371
            +A
Sbjct: 416 FSA 418

---

>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score =  103 bits (258), Expect = 3e-22
 Identities = 54/120 (45%), Positives = 75/120 (62%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF     V V+AATNRPD+LD ALLRPGRFDR + V  PD  GR+ IL+VH+R  
Sbjct: 268 LAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRM 327

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L K VD   +A  T G +GADL+ +  EA + A R     +++++   A+++++    K
Sbjct: 328 KL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386

---

>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score =  103 bits (257), Expect = 3e-22
 Identities = 54/120 (45%), Positives = 76/120 (63%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF     V V+AATNRPD+LD ALLRPGRFDR + V  PD  GR+ IL+VH+R  
Sbjct: 268 LAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRM 327

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L K+VD   +A  T G +GADL+ +  EA + A R     +++++   A+++++    K
Sbjct: 328 KL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386

---

>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 396

 Score =  103 bits (257), Expect = 3e-22
 Identities = 56/121 (46%), Positives = 78/121 (64%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF     V V+AATNRPD+LD ALLRPGRFDR + V  PD  GR+ IL+VH+R  
Sbjct: 265 LAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRM 324

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L + VD   +A  T G +GADL+ +  EA + A R     +++++   A+++++ G EK
Sbjct: 325 KL-RGVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVL-GNEK 382

Query: 363 K 365
           K
Sbjct: 383 K 383

---

>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score =  103 bits (257), Expect = 3e-22
 Identities = 49/115 (42%), Positives = 77/115 (66%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L E+DGF     V V+ ATNR D+LD A+LRPGRFDR + V  P   GR++I ++H+R  
Sbjct: 269 LAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKM 328

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
            LA+DVDF ++AR T G +GAD++ +  EA + A R +  +++  + + A+E+++
Sbjct: 329 KLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVL 383

---

>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog|
          Length = 438

 Score =  103 bits (257), Expect = 3e-22
 Identities = 47/120 (39%), Positives = 78/120 (65%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           +T++DGF     + VL ATNRP+ LD AL+RPGR DR+V    PD+ GR  IL +H++  
Sbjct: 307 ITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSM 366

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           A+ KD+ ++ +AR  P  TGA+L+++  EA + A R   +  ++ +  DA+++++ G +K
Sbjct: 367 AIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQK 426

---

>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 425

 Score =  102 bits (255), Expect = 6e-22
 Identities = 49/123 (39%), Positives = 77/123 (62%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           + ++DGF     + VL ATNRPD LD ALLRPGR DR+V    PD+  R +I ++H+R  
Sbjct: 295 VNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTM 354

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
              +D+ F+ +AR  P  TGAD++++  EA + A R   K +++ +  DA+ ++I G +K
Sbjct: 355 NCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQK 414

Query: 363 KNA 371
            +A
Sbjct: 415 FSA 417

---

>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory
           particle triple-A ATPase subunit 1a)
          Length = 426

 Score =  102 bits (255), Expect = 6e-22
 Identities = 49/123 (39%), Positives = 77/123 (62%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           + ++DGF     + VL ATNRPD LD ALLRPGR DR+V    PD+  R +I ++H+R  
Sbjct: 296 VNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTM 355

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
              +D+ F+ +AR  P  TGAD++++  EA + A R   K +++ +  DA+ ++I G +K
Sbjct: 356 NCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQK 415

Query: 363 KNA 371
            +A
Sbjct: 416 FSA 418

---

>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7|
          Length = 435

 Score =  102 bits (253), Expect = 1e-21
 Identities = 47/123 (38%), Positives = 79/123 (64%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           + ++DGF     + VL ATNRPD LD AL+RPGR DR+V    PD+AGR  IL++H++  
Sbjct: 305 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQM 364

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           ++ +D+ +D +AR  P  TGA+++++  EA + A R   K  ++ +  +A+ +++ G  K
Sbjct: 365 SVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKGYAK 424

Query: 363 KNA 371
            +A
Sbjct: 425 FSA 427

---

>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score =  101 bits (252), Expect = 1e-21
 Identities = 51/109 (46%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG    S V+V+AATNRP+ +D AL R GRFDR+V V  PD  GR+ IL +H++  
Sbjct: 349 LTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNM 408

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAI--LAARRDLKEISKDEI 323
            LA DVD +++A  T G+ G+DL +L +EAA+  +  + D+ ++ +DEI
Sbjct: 409 KLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEI 457



 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 61/167 (36%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
            LTEMDG +    V V+ ATNRPD +D AL+RPGR D+ + V  PD   R  IL+   R  
Sbjct: 624  LTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHT 683

Query: 183  ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
             +A+DVD   VA+ T GF+GADL+ ++  A  LA +  ++E  K E              
Sbjct: 684  PVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDVVMD 743

Query: 363  KNAVVSEQKRKLV--AYHEAGHALVGALMPEYDPVAKISIIPRGQAG 497
            ++A VS+ +R  V  A   A  ++  A +  Y+  A   +  RG  G
Sbjct: 744  EDASVSQVQRHHVEEAMKMARRSVSDAEVRRYEAYAHQLLTSRGLTG 790

---

>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  101 bits (251), Expect = 2e-21
 Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG    + VIV+AATNRP+ +D AL R GRFDR+V +  PD  GR+ IL++H++  
Sbjct: 328 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 387

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 332
            LA DVD ++VA  T G  GADL  L +EAA+ A R+ +  I  +DE  DA
Sbjct: 388 KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438



 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 46/100 (46%), Positives = 64/100 (64%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG S    V ++ ATNRPD++D A+LRPGR D+ + +  PD   RV IL+ + R  
Sbjct: 604 LTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKS 663

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 302
            +AKDVD + +A+ T GF+GADL  +   A  LA R  ++
Sbjct: 664 PVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703

---

>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  101 bits (251), Expect = 2e-21
 Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG    + VIV+AATNRP+ +D AL R GRFDR+V +  PD  GR+ IL++H++  
Sbjct: 328 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 387

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 332
            LA DVD ++VA  T G  GADL  L +EAA+ A R+ +  I  +DE  DA
Sbjct: 388 KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438



 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 46/100 (46%), Positives = 64/100 (64%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG S    V ++ ATNRPD++D A+LRPGR D+ + +  PD   RV IL+ + R  
Sbjct: 604 LTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKS 663

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 302
            +AKDVD + +A+ T GF+GADL  +   A  LA R  ++
Sbjct: 664 PVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703

---

>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  101 bits (251), Expect = 2e-21
 Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG    + VIV+AATNRP+ +D AL R GRFDR+V +  PD  GR+ IL++H++  
Sbjct: 328 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 387

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 332
            LA DVD ++VA  T G  GADL  L +EAA+ A R+ +  I  +DE  DA
Sbjct: 388 KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438



 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 46/100 (46%), Positives = 64/100 (64%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG S    V ++ ATNRPD++D A+LRPGR D+ + +  PD   RV IL+ + R  
Sbjct: 604 LTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKS 663

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 302
            +AKDVD + +A+ T GF+GADL  +   A  LA R  ++
Sbjct: 664 PVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703

---

>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  101 bits (251), Expect = 2e-21
 Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG    + VIV+AATNRP+ +D AL R GRFDR+V +  PD  GR+ IL++H++  
Sbjct: 328 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM 387

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 332
            LA DVD ++VA  T G  GADL  L +EAA+ A R+ +  I  +DE  DA
Sbjct: 388 KLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 438



 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 46/100 (46%), Positives = 64/100 (64%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG S    V ++ ATNRPD++D A+LRPGR D+ + +  PD   RV IL+ + R  
Sbjct: 604 LTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKS 663

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 302
            +AKDVD + +A+ T GF+GADL  +   A  LA R  ++
Sbjct: 664 PVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703

---

>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score =  101 bits (251), Expect = 2e-21
 Identities = 50/109 (45%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG    S V+V+AATNRP+ +D AL R GRFDR+V +  PD  GR+ +L +H++  
Sbjct: 339 LTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNM 398

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAI--LAARRDLKEISKDEI 323
            LA DVD + +A  T G+ GAD+ +L +EAA+  +  + DL ++ +DEI
Sbjct: 399 KLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEI 447



 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
            LTEMDG +    V V+ ATNRPD +D A+LRPGR D+ + V  PD   R+ IL    R  
Sbjct: 615  LTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKT 674

Query: 183  ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILA------------ARRDLKEISKD-EI 323
             L   ++   +A+ T GF+GADL  ++  AA  A            A +++K   +D E+
Sbjct: 675  PLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEM 734

Query: 324  SDALERIIAGPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL 503
            +D   +    PE        ++    A   A  ++  A +  Y+  ++     RGQ    
Sbjct: 735  TDEGAKAEQEPEVDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKASRGQFSNF 794

Query: 504  TF 509
             F
Sbjct: 795  NF 796

---

>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 407

 Score =  101 bits (251), Expect = 2e-21
 Identities = 52/120 (43%), Positives = 73/120 (60%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L EMDGF     V ++AATNRPD+LD A+LRPGRFDR + +  PD  GR+ IL++H+  K
Sbjct: 276 LAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTE-K 334

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
              K VD  +VA+      GADL+ +  EA + A R + + I  D+  +A+ +I    EK
Sbjct: 335 MNLKGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKEK 394

---

>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
           (p97/CDC48 homolog 1)
          Length = 809

 Score =  100 bits (250), Expect = 2e-21
 Identities = 48/106 (45%), Positives = 70/106 (66%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG  G S ++V+AATNRP+ +D AL R GRFDR++ +  PD  GR+ IL +H++  
Sbjct: 335 LTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNM 394

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 320
            LA DVD +++A    GF GADL +L +EAA+   R  ++ I  ++
Sbjct: 395 KLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLED 440



 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 44/101 (43%), Positives = 64/101 (63%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG +    V ++ ATNRPD++D A+LRPGR D+ + +  PD A R +IL+   R  
Sbjct: 612 LTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKT 671

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 305
            L+KD+D   +A+ T GF+GADL  +   A  LA R  +++
Sbjct: 672 PLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEK 712

---

>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 429

 Score =  100 bits (249), Expect = 3e-21
 Identities = 50/124 (40%), Positives = 82/124 (66%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGFS +  + V+AATNR D+LD AL+R GR DR++    P    R RIL++HSR  
Sbjct: 304 LNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKM 363

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            +  DV+F+++AR T  F GA L+ +  EA +LA RRD  E++ ++ ++ + ++ A  +K
Sbjct: 364 NVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQA--KK 421

Query: 363 KNAV 374
           K+++
Sbjct: 422 KSSL 425

---

>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 424

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 48/116 (41%), Positives = 76/116 (65%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGFS +  + V+AATNR D+LD AL+R GR DR++    P    R RIL++HSR  
Sbjct: 299 LNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKM 358

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 350
            +  DV+F+++AR T  F GA L+ +  EA +LA RRD  E++ ++ ++ + ++ A
Sbjct: 359 NVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 414

---

>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
           (LEMA-1)
          Length = 423

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 48/116 (41%), Positives = 76/116 (65%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGFS +  + V+AATNR D+LD AL+R GR DR++    P    R RIL++HSR  
Sbjct: 298 LNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKM 357

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 350
            +  DV+F+++AR T  F GA L+ +  EA +LA RRD  E++ ++ ++ + ++ A
Sbjct: 358 NVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQA 413

---

>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score = 99.4 bits (246), Expect = 6e-21
 Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG    + VIV+AATNRP+ +D AL R GRFDR+V +  PD  GR+ IL++H++  
Sbjct: 329 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNM 388

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 332
            L+ DVD ++VA  T G  GADL  L +EAA+ A R+ +  I  +DE  DA
Sbjct: 389 KLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 439



 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 46/100 (46%), Positives = 64/100 (64%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG S    V ++ ATNRPD++D A+LRPGR D+ + +  PD   R+ IL+ + R  
Sbjct: 605 LTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKS 664

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 302
            +AKDVD D +A+ T GF+GADL  +   A  LA R  ++
Sbjct: 665 PVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIE 704

---

>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome|
           regulatory subunit 2)
          Length = 407

 Score = 99.0 bits (245), Expect = 8e-21
 Identities = 48/114 (42%), Positives = 71/114 (62%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L+EMDGF     + ++AATNR D+LD A+LRPGRFDR + V  P+V GR +I  +H+R  
Sbjct: 277 LSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRAM 336

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 344
            +A  VDF ++A  T   +GAD++ +  EA + A R D  E+   +   A E++
Sbjct: 337 NVADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDRTEVRMQDFQSAREKL 390

---

>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 419

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 48/116 (41%), Positives = 76/116 (65%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGFS +  + V+AATNR D+LD AL+R GR DR++    P    R RIL++HSR  
Sbjct: 294 LNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKM 353

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 350
            +  DV+F+++AR T  F GA L+ +  EA +LA RRD  E++ ++ ++ + ++ A
Sbjct: 354 NVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 409

---

>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
           (p97/CDC48 homolog 2)
          Length = 810

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG    + V+V+AATNRP+ +D AL R GRFDR++ +  PD  GR+ IL +H++  
Sbjct: 334 LTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNM 393

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 332
            L +DVD ++VA    GF GADL +L +EAAI   R  ++ I  +D+  DA
Sbjct: 394 KLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDA 444



 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 43/106 (40%), Positives = 65/106 (61%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG +    V ++ ATNRPD++D A+LRPGR D+ + +  PD A R++I +   R  
Sbjct: 610 LTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKT 669

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 320
            L+ D+D + +A+ T GF+GADL  +   A  LA R  ++   + E
Sbjct: 670 PLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQE 715

---

>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)|
           (Proteasomal cap subunit)
          Length = 437

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 51/129 (39%), Positives = 74/129 (57%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT+MDGF       ++ ATNRPD LD ALLRPGR DR+V +  P+ AGR+ I ++H+   
Sbjct: 309 LTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKV 368

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
               + DF+   + + GF GAD++N   EA   A R D   I+ D++  A+ R +A  +K
Sbjct: 369 KKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAV-RKVAEVKK 427

Query: 363 KNAVVSEQK 389
               +  QK
Sbjct: 428 LEGTIEYQK 436

---

>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 433

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 45/123 (36%), Positives = 76/123 (61%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           + ++DGF     + VL ATNRPD LD AL+RPGR DR++    PD+ GR  I ++H+R  
Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSM 362

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           ++ +D+ F+ +AR  P  TGA+++++  EA + A R   K  ++ +  +A+ ++I    K
Sbjct: 363 SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYAK 422

Query: 363 KNA 371
            +A
Sbjct: 423 FSA 425

---

>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)|
          Length = 603

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 48/99 (48%), Positives = 65/99 (65%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG     G++VLAATNRP  +D+AL+RPGRFD  + V  PD+  R  IL+VH+R  
Sbjct: 415 LTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNM 474

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 299
            L  DVD  K+A  T  FTGA+L+ L  E+  ++ R ++
Sbjct: 475 TLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENI 513



 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 39/115 (33%), Positives = 61/115 (53%)
 Frame = +3

Query: 39  VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 218
           V+V+A+TNR D +D AL R GRFD  V V  P+   R++IL+++++   L   VD   +A
Sbjct: 165 VVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIA 224

Query: 219 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 383
               G+ GADL+ L  EA I A++R    +        + + + GP     +  E
Sbjct: 225 ISCNGYVGADLEALCREATISASKRSSDSLILTSQDFKIAKSVVGPSINRGITVE 279

---

>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 45/123 (36%), Positives = 76/123 (61%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           + ++DGF     + VL ATNRPD LD AL+RPGR DR++    PD+ GR  I ++H+R  
Sbjct: 302 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSM 361

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           ++ +D+ F+ +AR  P  TGA+++++  EA + A R   K  ++ +  +A+ ++I    K
Sbjct: 362 SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAK 421

Query: 363 KNA 371
            +A
Sbjct: 422 FSA 424

---

>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 45/123 (36%), Positives = 76/123 (61%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           + ++DGF     + VL ATNRPD LD AL+RPGR DR++    PD+ GR  I ++H+R  
Sbjct: 302 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSM 361

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           ++ +D+ F+ +AR  P  TGA+++++  EA + A R   K  ++ +  +A+ ++I    K
Sbjct: 362 SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAK 421

Query: 363 KNA 371
            +A
Sbjct: 422 FSA 424

---

>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 45/123 (36%), Positives = 76/123 (61%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           + ++DGF     + VL ATNRPD LD AL+RPGR DR++    PD+ GR  I ++H+R  
Sbjct: 302 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSM 361

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           ++ +D+ F+ +AR  P  TGA+++++  EA + A R   K  ++ +  +A+ ++I    K
Sbjct: 362 SVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAK 421

Query: 363 KNA 371
            +A
Sbjct: 422 FSA 424

---

>FTSH_CHLVU (P56369) Cell division protein ftsH homolog|
          Length = 1720

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 17/178 (9%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
            L E+DG  G +GV++  ATNRP+VLD ALLRPGRFD+ V V  P    RV IL+ + +  
Sbjct: 1159 LIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKRVEILQFYGQTL 1218

Query: 183  ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
               K + +     RT GFT ADL  LMNE+A+ A        + + +   +ER+     +
Sbjct: 1219 GYQKTMPWAYFGERTVGFTAADLATLMNESALKAILNQSNH-TIETLEHGIERLTTSESE 1277

Query: 363  KNAVVSEQKR-----------------KLVAYHEAGHALVGALMPEYDPVAKISIIPR 485
            K  V+ ++K                    +AY++AG  L+   +  +    + S+ PR
Sbjct: 1278 KYTVLKKEKEFKNKTTTPLLNSSRIYSLRLAYYQAGKLLLSYALETHPKTMRASLWPR 1335

---

>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
           (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 47/106 (44%), Positives = 68/106 (64%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG    + VIV+ ATNRP+ +D AL R GRFDR++ +  PD  GR+ +L +H++  
Sbjct: 333 LTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNM 392

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 320
            LA+DVD ++V++ T G+ GADL  L  EAA+   R  +  I  D+
Sbjct: 393 KLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDD 438



 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 44/106 (41%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG +    V ++ ATNRPD++D ALLRPGR D+ + +  PD   R +I +   R  
Sbjct: 609 LTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKS 668

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL-KEISKD 317
            +AKDVD   +A+ T GF+GAD+  +   +   A R ++ K+I K+
Sbjct: 669 PVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKE 714

---

>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
           protein homolog) (VCP)
          Length = 807

 Score = 96.3 bits (238), Expect = 5e-20
 Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG    + VIV+ ATNRP+ +D AL R GRFDR++ +  PD  GR+ +L +H++  
Sbjct: 333 LTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNM 392

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 332
            L+ DVD +++A+ T G+ GADL  L  EAA+   R  +  I  +DE  DA
Sbjct: 393 KLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDA 443



 Score = 89.0 bits (219), Expect = 9e-18
 Identities = 46/109 (42%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG S    V ++ ATNRPD++D ALLRPGR D+ + +  PD   R +I +   R  
Sbjct: 609 LTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKS 668

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL-KEISKDEIS 326
            +AK+VD   +AR T GF+GAD+  +   A   A R ++ K+I ++  S
Sbjct: 669 PIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKDIERERKS 717

---

>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)|
           (TAT-binding homolog 3)
          Length = 467

 Score = 96.3 bits (238), Expect = 5e-20
 Identities = 44/120 (36%), Positives = 76/120 (63%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           +T++DGF     + V+ ATNRP+ LD ALLRPGR DR+V    PD+ GR  I  +HS+  
Sbjct: 337 ITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSM 396

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           ++ + + ++ ++R  P  TGA+L+++  EA + A R   K  ++ +   A++++I+G +K
Sbjct: 397 SVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISGYKK 456

---

>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score = 95.5 bits (236), Expect = 9e-20
 Identities = 48/131 (36%), Positives = 83/131 (63%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L E+DGF     V ++AATNR D+LD ALLRPGRFDR + V  PD  GR  I  ++ +  
Sbjct: 262 LAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKM 321

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            +  +++ + +++ T GF+GAD++N+  EAA +A R    +++ +++ +A+ +I     K
Sbjct: 322 KIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKINV---K 378

Query: 363 KNAVVSEQKRK 395
           +N + S ++R+
Sbjct: 379 RNKMESMKERR 389

---

>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 46/108 (42%), Positives = 69/108 (63%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG    + VIV+ ATNRP+ +D AL R GRFDR++ +  PD  GR+ +L +H++  
Sbjct: 332 LTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNM 391

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 326
            LA+DVD +++++ T G+ GADL  L  EAA+   R  +  I  ++ S
Sbjct: 392 KLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDS 439



 Score = 92.8 bits (229), Expect = 6e-19
 Identities = 46/107 (42%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG +    V ++ ATNRPD++DSALLRPGR D+ + +  PD   R+ I +   R  
Sbjct: 609 LTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKS 668

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL-KEISKDE 320
            +AKDVD   +A+ T GF+GAD+  +   A   A R ++ K+I K++
Sbjct: 669 PIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEK 715

---

>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
           (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 46/108 (42%), Positives = 69/108 (63%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG    + VIV+ ATNRP+ +D AL R GRFDR++ +  PD  GR+ +L +H++  
Sbjct: 332 LTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNM 391

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 326
            LA+DVD +++++ T G+ GADL  L  EAA+   R  +  I  ++ S
Sbjct: 392 KLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDS 439



 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 44/106 (41%), Positives = 66/106 (62%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG +    V ++ ATNRPD++DSALLRPGR D+ + +  PD   R+ I +   R  
Sbjct: 608 LTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKS 667

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 320
            +AKDVD   +A+ T GF+GAD+  +   A   A R ++++  ++E
Sbjct: 668 PVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIENE 713

---

>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding
           protein homolog SATA)
          Length = 439

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 50/123 (40%), Positives = 77/123 (62%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF  N+ V V+AATNR D+LD ALLR GR DR++    P+   R RI+++HSR  
Sbjct: 314 LNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKM 373

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            ++ DV+++++AR T  F GA  + +  EA ++A RR   E++ +   D +E I+    K
Sbjct: 374 NVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHE---DYMEGILEVQAK 430

Query: 363 KNA 371
           K A
Sbjct: 431 KKA 433

---

>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Proteasome subunit P50)
          Length = 439

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 50/123 (40%), Positives = 77/123 (62%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF  N+ V V+AATNR D+LD ALLR GR DR++    P+   R RI+++HSR  
Sbjct: 314 LNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKM 373

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            ++ DV+++++AR T  F GA  + +  EA ++A RR   E++ +   D +E I+    K
Sbjct: 374 NVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHE---DYMEGILEVQAK 430

Query: 363 KNA 371
           K A
Sbjct: 431 KKA 433

---

>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1157

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 61/161 (37%), Positives = 91/161 (56%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
            LT+MDG  G  GV VLAAT+RPD++DSALLRPGR D+ V  D PD   R+ IL+  +R  
Sbjct: 924  LTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNM 983

Query: 183  ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
             ++K V+   VA    GF+GADLQ L   A + A     ++++KDE        +AG   
Sbjct: 984  NVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVH---EKLTKDE-----SMAMAGEMD 1035

Query: 363  KNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISIIPR 485
             N    ++KR +  +  +G+    +L+ E  P  + ++I +
Sbjct: 1036 DN---DDKKRMVECFQFSGNTEKKSLI-ELKPSDRATVIKK 1072

---

>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1)
          Length = 442

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 50/123 (40%), Positives = 77/123 (62%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF  N+ V V+AATNR D+LD ALLR GR DR++    P+   R RI+++HSR  
Sbjct: 317 LNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKM 376

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            ++ DV+++++AR T  F GA  + +  EA ++A RR   E++ +   D +E I+    K
Sbjct: 377 NVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHE---DHMEGILEVQAK 433

Query: 363 KNA 371
           K A
Sbjct: 434 KKA 436

---

>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score = 92.8 bits (229), Expect = 6e-19
 Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LT MDG    + VIV+ ATNRP+ +D AL R GRFDR++ +  PD  GR+ +L +H++  
Sbjct: 333 LTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLGIHTKNM 392

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR--DLKEISKDEI 323
            LA++VD +++++ T G+ GADL  L  EAA+   R   D+ ++  D I
Sbjct: 393 KLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLDLEDDTI 441



 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 43/107 (40%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG +    V ++ ATNRPD++D ALLRPGR D+ + +  PD   R +I +   R  
Sbjct: 609 LTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKS 668

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL-KEISKDE 320
            L+KD+D   +A+ T GF+GAD+  +   A   A R ++ K+I +++
Sbjct: 669 PLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEKDIEREK 715

---

>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)|
          Length = 890

 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 14/175 (8%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG- 179
            L  MDG+   + +I++ ATNR + LD A++RPGRFDRQ+    P    R  IL +  R  
Sbjct: 490  LIYMDGYKKRNDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIFLRNT 549

Query: 180  KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAA------RRDLKEISKDEISDALER 341
            KAL  D     +A R+ G  G DL+ L +   +L+A      ++ +  I++D    ALER
Sbjct: 550  KALVDDTTKTMMAERSIGLNGCDLRLLADNILLLSALESRNQQKTIPVINEDTFDRALER 609

Query: 342  IIAGPEKKNAVVSEQKRKL-------VAYHEAGHALVGALMPEYDPVAKISIIPR 485
            +     +   ++S  +           AYHEAG AL+  L+PE  PV  + + P+
Sbjct: 610  V----SRIRHIISNYELAFGKYDFYRTAYHEAGIALIHTLLPECRPVYSVKLFPK 660

---

>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein|
           10) (TBP-10)
          Length = 404

 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 50/123 (40%), Positives = 76/123 (61%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF   + V V+AATNR D+LD ALLR GR DR++    P+   R RI+++HSR  
Sbjct: 279 LNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKM 338

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            ++ DV+++++AR T  F GA  + +  EA I+A RR   E++ +   D +E I+    K
Sbjct: 339 NVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHE---DYMEGILEVQAK 395

Query: 363 KNA 371
           K A
Sbjct: 396 KKA 398

---

>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 46/129 (35%), Positives = 75/129 (58%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDGF       ++ ATNRPD LD ALLRPGR DR++ +  P+  GR+ IL++H    
Sbjct: 260 LNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKV 319

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
           +   ++D++ + + T G  GADL+N++ EA  +A + D   + + ++  A  R +A  +K
Sbjct: 320 SKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSA-ARKVADLKK 378

Query: 363 KNAVVSEQK 389
               +  QK
Sbjct: 379 LEGTIDYQK 387

---

>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 43/127 (33%), Positives = 76/127 (59%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     + V+ ATNR D+LDSALLRPGR DR++    P+   R+ IL++HSR  
Sbjct: 277 LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM 336

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L + ++  K+A   PG +GA+++ +  EA + A R     +++++   A+ +++    +
Sbjct: 337 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 396

Query: 363 KNAVVSE 383
           KN  + +
Sbjct: 397 KNMSIKK 403

---

>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding
           protein homolog 10) (TBP10)
          Length = 406

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 43/127 (33%), Positives = 76/127 (59%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     + V+ ATNR D+LDSALLRPGR DR++    P+   R+ IL++HSR  
Sbjct: 277 LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM 336

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L + ++  K+A   PG +GA+++ +  EA + A R     +++++   A+ +++    +
Sbjct: 337 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 396

Query: 363 KNAVVSE 383
           KN  + +
Sbjct: 397 KNMSIKK 403

---

>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1)
          Length = 406

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 43/127 (33%), Positives = 76/127 (59%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     + V+ ATNR D+LDSALLRPGR DR++    P+   R+ IL++HSR  
Sbjct: 277 LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM 336

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L + ++  K+A   PG +GA+++ +  EA + A R     +++++   A+ +++    +
Sbjct: 337 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 396

Query: 363 KNAVVSE 383
           KN  + +
Sbjct: 397 KNMSIKK 403

---

>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 43/127 (33%), Positives = 76/127 (59%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     + V+ ATNR D+LDSALLRPGR DR++    P+   R+ IL++HSR  
Sbjct: 277 LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM 336

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L + ++  K+A   PG +GA+++ +  EA + A R     +++++   A+ +++    +
Sbjct: 337 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 396

Query: 363 KNAVVSE 383
           KN  + +
Sbjct: 397 KNMSIKK 403

---

>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5)
          Length = 406

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 43/127 (33%), Positives = 76/127 (59%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     + V+ ATNR D+LDSALLRPGR DR++    P+   R+ IL++HSR  
Sbjct: 277 LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM 336

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L + ++  K+A   PG +GA+++ +  EA + A R     +++++   A+ +++    +
Sbjct: 337 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 396

Query: 363 KNAVVSE 383
           KN  + +
Sbjct: 397 KNMSIKK 403

---

>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)|
          Length = 461

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 43/127 (33%), Positives = 76/127 (59%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     + V+ ATNR D+LDSALLRPGR DR++    P+   R+ IL++HSR  
Sbjct: 271 LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM 330

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L + ++  K+A   PG +GA+++ +  EA + A R     +++++   A+ +++    +
Sbjct: 331 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 390

Query: 363 KNAVVSE 383
           KN  + +
Sbjct: 391 KNMSIKK 397

---

>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome|
           regulatory particle ATPase-like protein 4)
          Length = 406

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 43/114 (37%), Positives = 70/114 (61%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     V V+ ATNRPD LD ALLRPGR DR++ +  P+   R+ IL++HS   
Sbjct: 278 LNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKI 337

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 344
               ++DF+ V + + GF+ ADL+N+  EA + A R + + +  ++   A+ ++
Sbjct: 338 TKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKV 391

---

>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 43/114 (37%), Positives = 71/114 (62%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDGF     V ++ ATNRPD LD ALLRPGR DR++ +D P+   R+ IL++H+   
Sbjct: 261 LNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPI 320

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 344
               ++D++ + + + GF GADL+N+  EA + A R D   + +++   A+ ++
Sbjct: 321 TKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374

---

>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 43/114 (37%), Positives = 71/114 (62%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDGF     V ++ ATNRPD LD ALLRPGR DR++ +D P+   R+ IL++H+   
Sbjct: 261 LNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPI 320

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 344
               ++D++ + + + GF GADL+N+  EA + A R D   + +++   A+ ++
Sbjct: 321 TKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374

---

>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 43/114 (37%), Positives = 71/114 (62%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDGF     V ++ ATNRPD LD ALLRPGR DR++ +D P+   R+ IL++H+   
Sbjct: 261 LNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPI 320

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 344
               ++D++ + + + GF GADL+N+  EA + A R D   + +++   A+ ++
Sbjct: 321 TKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374

---

>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 392

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 47/120 (39%), Positives = 72/120 (60%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L E+DGF     V ++AATNR D+LD ALLRPGRFDR + V  P+  GR  I  ++ +  
Sbjct: 262 LAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKM 321

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
               ++ +D +A  T GF+GA+++N+  EA  +A R   K ++  ++  A+E+I A   K
Sbjct: 322 KTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNNK 381

---

>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein|
           homolog 10) (Fragment)
          Length = 389

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 43/127 (33%), Positives = 76/127 (59%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     + VL  TNR D+LD ALLRPGR DR++    P  AGR+ IL++HSR  
Sbjct: 260 LNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKM 319

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L + ++  K++ +  G +GA+L+ +  EA + A R     +S+++   A+ +++    +
Sbjct: 320 NLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKVMKKDSE 379

Query: 363 KNAVVSE 383
           +N  +++
Sbjct: 380 QNMSINK 386

---

>PRS8_DROME (O18413) 26S protease regulatory subunit 8|
          Length = 405

 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 42/127 (33%), Positives = 75/127 (59%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     + V+ ATNR D+LD ALLRPGR DR++    P+   R+ IL++HSR  
Sbjct: 276 LNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM 335

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L + ++  K+A   PG +GA+++ +  EA + A R     +++++   A+ +++    +
Sbjct: 336 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 395

Query: 363 KNAVVSE 383
           KN  + +
Sbjct: 396 KNMSIKK 402

---

>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)|
          Length = 402

 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 42/127 (33%), Positives = 75/127 (59%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     + V+ ATNR D+LD ALLRPGR DR++    P+   R+ IL++HSR  
Sbjct: 273 LNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM 332

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L + ++  K+A   PG +GA+++ +  EA + A R     +++++   A+ +++    +
Sbjct: 333 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSE 392

Query: 363 KNAVVSE 383
           KN  + +
Sbjct: 393 KNMSIKK 399

---

>TBP7_YEAST (P40340) TAT-binding homolog 7|
          Length = 1379

 Score = 89.4 bits (220), Expect = 7e-18
 Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L  MDG      VIV+ ATNRPD +D AL RPGRFDR+     PDV  R +IL++ +R  
Sbjct: 543 LALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRKW 602

Query: 183 ALAKDVDF-DKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 359
           +     +F DK+A  T G+ GADL++L  EAA+++ +R   +I +       ++++  P 
Sbjct: 603 SSPLSTNFIDKLAFLTKGYGGADLRSLCTEAALISIQRSFPQIYRSN-----DKLLVDPS 657

Query: 360 KKNAVVSE 383
           K    VS+
Sbjct: 658 KIKVKVSD 665

---

>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase|
          Length = 1229

 Score = 89.0 bits (219), Expect = 9e-18
 Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
            LT MDG   N+ V+VLAATNRP+ +D AL R GRFDR++ +  PD  GR  IL   ++  
Sbjct: 652  LTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKM 711

Query: 183  ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE--RIIAGP 356
             L  DV+  K+A+   G+ GADL  L  EAAI   +  +  +  DE  D +E  +I    
Sbjct: 712  KLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDE-EDFIEFMKISVDE 770

Query: 357  EKKN 368
            +KKN
Sbjct: 771  DKKN 774



 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 40/90 (44%), Positives = 57/90 (63%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
            LTE+DG +    + ++AATNRPD+LD AL RPGR D+ + +  PD+  R  I +   +  
Sbjct: 1060 LTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNT 1119

Query: 183  ALAKDVDFDKVARRTPGFTGADLQNLMNEA 272
             L +DVD   +A+RT GF+GAD+ NL   A
Sbjct: 1120 PLNEDVDIHDMAKRTEGFSGADITNLCQSA 1149

---

>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)|
           (CIM3 protein) (TAT-binding protein TBY1)
          Length = 405

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 42/115 (36%), Positives = 70/115 (60%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF  +  + ++ ATNR D+LD ALLRPGR DR++    P VA R  IL +HSR  
Sbjct: 276 LNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKM 335

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
            L + ++  KVA +  G +GAD++ +  EA + A R     +++++   A+ +++
Sbjct: 336 NLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKVM 390

---

>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein|
           homolog 1) (TBP-1)
          Length = 434

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 46/120 (38%), Positives = 69/120 (57%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGFS +  V VLAATNR DVLD ALLR GR DR++    P    R +IL++HSR  
Sbjct: 309 LNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKM 368

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
               D+++ ++AR T  F GA L+ +  EA ++A R     +  ++  + +  + A   K
Sbjct: 369 TTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSK 428

---

>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1043

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 9/116 (7%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE--VHSR 176
            LT+MDG  G  GV +LAAT+RPD++DSALLRPGR D+ V  + P  + R+ IL+  V+S+
Sbjct: 822  LTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSK 881

Query: 177  GK-------ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 323
             K       AL K+ D   +A +T GF+GADLQ L   A + +  R L    + E+
Sbjct: 882  DKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNAYLKSVHRWLSAADQSEV 937

---

>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome|
            biogenesis disorder protein 1)
          Length = 1283

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 49/94 (52%), Positives = 59/94 (62%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
            LT++DG  G  GV VLAAT+RPD++D ALLRPGR D+ V    PD   R+ IL V S   
Sbjct: 965  LTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSL 1024

Query: 183  ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILA 284
             LA DVD   VA  T  FTGADL+ L+  A + A
Sbjct: 1025 PLADDVDLQHVASVTDSFTGADLKALLYNAQLEA 1058

---

>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)|
          Length = 403

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 40/115 (34%), Positives = 66/115 (57%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     + V+ ATNR D+LD ALLRPGR DR++    P    R  IL +HSR  
Sbjct: 274 LNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSM 333

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
            L + +D   +A +  G +GA+L+ +  EA + A R     +++++   A+ +++
Sbjct: 334 NLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVL 388

---

>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7|
          Length = 837

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 45/116 (38%), Positives = 74/116 (63%), Gaps = 4/116 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE--VHSR 176
           LTE+DG +   G+ V+ ATNRPD++D A+LRPGR D+ + ++ P+   ++ I++    S 
Sbjct: 658 LTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSH 717

Query: 177 GKALAKDVDFDKVAR--RTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE 338
           G  L+ DVDF+++ R  +   F+GADL  L+ E+++LA +R  K    +EI   L+
Sbjct: 718 GTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKR--KFFQSEEIQSVLD 771



 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
 Frame = +3

Query: 3   LTEMDGFS----GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH 170
           LT MD  +        VI++ ATNRPD LD+AL R GRFDR++ ++ P+   R+ IL+  
Sbjct: 331 LTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKM 390

Query: 171 SRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 293
           S    +   +DF K+A+ TPGF GADL+ L+  A   A +R
Sbjct: 391 SDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKR 431

---

>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A|
          Length = 438

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 45/111 (40%), Positives = 71/111 (63%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGFS +  V V+AATNR D LD ALLR GR DR++    P+   RV IL +HSR  
Sbjct: 313 LNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKM 372

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDAL 335
           A+  D++++++AR T  + GA L+++  EA ++A R+   +I+ +   D +
Sbjct: 373 AIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGI 423

---

>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding|
           homolog 5)
          Length = 437

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 40/122 (32%), Positives = 73/122 (59%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     V V+ ATN+ + LD AL+RPGR DR++  + PD++ + +IL +H+   
Sbjct: 310 LNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKM 369

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L++DV+ + +       +GAD+Q +  EA +LA R    +++ ++   A ER++    +
Sbjct: 370 NLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVE 429

Query: 363 KN 368
           +N
Sbjct: 430 EN 431

---

>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 856

 Score = 85.5 bits (210), Expect = 9e-17
 Identities = 45/106 (42%), Positives = 64/106 (60%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           + +++  +  + V+V+ ATNRPD LD AL R GRFDR++ +  PD A R RIL+   R  
Sbjct: 392 MDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKL 451

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 320
            L +  DF  +A  TPGF GADL  L  EAA+ A  R L ++ + +
Sbjct: 452 RLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQ 497



 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 49/144 (34%), Positives = 80/144 (55%), Gaps = 16/144 (11%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG- 179
            LTEMDG      V ++AATNRPD++D A+LRPGR D+ + V  P  A R+ IL+  ++  
Sbjct: 706  LTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNG 765

Query: 180  --KALAKDVDFDKVA--RRTPGFTGADLQNLMNEAAILAARRDLK-----------EISK 314
                L  DV+ + +A   R   +TGADL  L+ EA+I A R+++            ++S 
Sbjct: 766  TKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSH 825

Query: 315  DEISDALERIIAGPEKKNAVVSEQ 386
                +A +++ +   KK+ ++ E+
Sbjct: 826  KHFEEAFKKVRSSISKKDQIMYER 849

---

>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding|
           protein homolog 2)
          Length = 448

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 42/115 (36%), Positives = 67/115 (58%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     V V+ ATNR + LD ALLRPGR DR++    PD+  R RI ++H+   
Sbjct: 321 LNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKM 380

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
            LA DV+ ++       F+GAD++ +  EA +LA R    +++  +   A E+++
Sbjct: 381 TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKKAKEKVM 435

---

>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding|
           protein homolog)
          Length = 414

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 39/122 (31%), Positives = 72/122 (59%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     + ++ ATNR D+LD ALLRPGR DR++    P+   R+ IL++HSR  
Sbjct: 285 LNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRM 344

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L + ++  K+A    G +GA+++    EA + A R     ++++++  A+ +++   ++
Sbjct: 345 NLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQEDLEMAVAKVMKRGDE 404

Query: 363 KN 368
            N
Sbjct: 405 SN 406

---

>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
          Length = 742

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS--- 173
           LT++DG    + V+++  TNR D+LD ALLRPGR + QV +  PD AGR++IL++H+   
Sbjct: 352 LTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKM 411

Query: 174 -RGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE 338
                L  D++  ++A RT  ++GA+L+ ++  A   A  R   ++S D+++  +E
Sbjct: 412 KENSFLGTDINLQELAARTKNYSGAELEGVVKSATSYALNR---QLSMDDLTKPVE 464

---

>AFG2_YEAST (P32794) Protein AFG2|
          Length = 780

 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL-EVHSRG 179
           L E+DG     GV+++AATNRPD +D+ALLRPGR DR + V  PDV  R+ IL +   + 
Sbjct: 641 LNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKF 700

Query: 180 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 323
                 VD  ++A RT G++GA++  L  EA + A   DL +++K E+
Sbjct: 701 NTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDL-DVAKVEL 747



 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH---- 170
           LT MDG      V+V+AATNRP+ +D AL RPGRFD++V +  PDV  R  IL       
Sbjct: 371 LTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRM 430

Query: 171 SRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 299
           S  + +        +A +T G+ GADL  L  E+ +   +R L
Sbjct: 431 SSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGL 473

---

>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein) (SKD2 protein)
          Length = 744

 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 43/111 (38%), Positives = 71/111 (63%), Gaps = 4/111 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS--- 173
           L+++DG    + ++V+  TNRPD++D ALLRPGR + ++ +  PD  GR++IL +H+   
Sbjct: 355 LSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARM 414

Query: 174 RG-KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 323
           RG + L+ DVD  ++A  T  F+GA+L+ L+  A   A  R +K  +K E+
Sbjct: 415 RGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEV 465

---

>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 43/111 (38%), Positives = 71/111 (63%), Gaps = 4/111 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS--- 173
           L+++DG    + ++V+  TNRPD++D ALLRPGR + ++ +  PD  GR++IL +H+   
Sbjct: 355 LSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARM 414

Query: 174 RG-KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 323
           RG + L+ DVD  ++A  T  F+GA+L+ L+  A   A  R +K  +K E+
Sbjct: 415 RGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEV 465

---

>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 43/111 (38%), Positives = 71/111 (63%), Gaps = 4/111 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS--- 173
           L+++DG    + ++V+  TNRPD++D ALLRPGR + ++ +  PD  GR++IL +H+   
Sbjct: 355 LSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARM 414

Query: 174 RG-KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 323
           RG + L+ DVD  ++A  T  F+GA+L+ L+  A   A  R +K  +K E+
Sbjct: 415 RGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEV 465

---

>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 855

 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 45/99 (45%), Positives = 60/99 (60%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           + +++  +  + V+V+ ATNRPD LD AL R GRFDR+V +  PD A R RIL+   R  
Sbjct: 391 MDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKL 450

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 299
            L +  +F  +A  TPGF GADL  L  EAA+ A  R L
Sbjct: 451 RLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVL 489



 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 16/143 (11%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG- 179
            LTEMDG      V +LAATNRPD++D A+LRPGR D+ + V  P  A RV IL+  ++  
Sbjct: 705  LTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNG 764

Query: 180  --KALAKDVDFDKVAR--RTPGFTGADLQNLMNEAAILAARRDLK-----------EISK 314
                L +DV+ + +A   R   +TGADL  L+ EA++ A R+++            ++S 
Sbjct: 765  TKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSH 824

Query: 315  DEISDALERIIAGPEKKNAVVSE 383
                DA +++      K+ V+ E
Sbjct: 825  KHFEDAFKKVKPSISIKDQVMYE 847

---

>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive|
           fusion protein 2) (NEM-sensitive fusion protein 2)
           (dNsf-2)
          Length = 752

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 43/119 (36%), Positives = 74/119 (62%), Gaps = 5/119 (4%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG- 179
           L ++DG    + ++V+  TNR D++D ALLRPGR + Q+ +  P+  GRV+IL +H++  
Sbjct: 360 LAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRM 419

Query: 180 ---KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS-DALERI 344
                +A DVD +++A +T  F+GA+L+ L+  A   A  R +K  SK  +  +A+E++
Sbjct: 420 RDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNRLIKADSKVHVDPEAMEKL 478

---

>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18|
          Length = 794

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR-- 176
           L++MDG    + ++V+  TNR D++D+ALLRPGRF+ Q+ +  PD  GR  I  +H++  
Sbjct: 413 LSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKL 472

Query: 177 --GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 305
                L+ DV+FD+++  T  FTGA+++ L N A   A  R  K+
Sbjct: 473 TENGILSSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAISRHTKK 517

---

>TBP7_CAEEL (P54816) TAT-binding homolog 7|
          Length = 1242

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L  MDG  G   V+V+ ATNR D LD AL RPGRFDR++    PD+  R +IL++H+   
Sbjct: 521 LALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDIHTSKW 580

Query: 183 ALAKDV--DFDKVARRTPGFTGADLQNLMNEAAILAAR 290
              K +    D +A RT G+ GADL+ L  EA ++  R
Sbjct: 581 EENKPIPETLDAIAERTSGYCGADLKFLCTEAVLIGLR 618

---

>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 38/115 (33%), Positives = 64/115 (55%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     V V+ ATNR + LD AL+RPGR DR++    PD   + RI ++H+   
Sbjct: 313 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRM 372

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
            LA DV  D +       +GAD++ +  EA ++A R    +++ ++   + E ++
Sbjct: 373 TLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL 427

---

>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 38/115 (33%), Positives = 64/115 (55%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     V V+ ATNR + LD AL+RPGR DR++    PD   + RI ++H+   
Sbjct: 313 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRM 372

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
            LA DV  D +       +GAD++ +  EA ++A R    +++ ++   + E ++
Sbjct: 373 TLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL 427

---

>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 38/115 (33%), Positives = 64/115 (55%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     V V+ ATNR + LD AL+RPGR DR++    PD   + RI ++H+   
Sbjct: 313 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRM 372

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
            LA DV  D +       +GAD++ +  EA ++A R    +++ ++   + E ++
Sbjct: 373 TLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL 427

---

>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 38/115 (33%), Positives = 64/115 (55%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     V V+ ATNR + LD AL+RPGR DR++    PD   + RI ++H+   
Sbjct: 313 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRM 372

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
            LA DV  D++       +GAD++ +  EA ++A R    +++ ++   + E  +
Sbjct: 373 TLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENFL 427

---

>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 824

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 43/119 (36%), Positives = 73/119 (61%), Gaps = 5/119 (4%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS--- 173
           L++MDG    + ++V+  TNR D++D ALLRPGR + Q+ V  PD  GR++IL++H+   
Sbjct: 432 LSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARM 491

Query: 174 -RGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS-DALERI 344
                +  +VD + +++RT  F+GA+L+ L+  A   A  R +K   K +   DA+E++
Sbjct: 492 REYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLVKAGGKAQADPDAIEKL 550

---

>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog|
          Length = 792

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDG    + ++V+  TNR D++D ALLRPGR +  + +  PD  GR++IL++H+   
Sbjct: 406 LAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRM 465

Query: 183 A----LAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 344
           A    L  DVD +++A  T  F+GA++  L+  A+  A  R +K  +   +S  LE I
Sbjct: 466 ASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFAFYRHIKVGTTAAVSGNLENI 523

---

>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)|
          Length = 439

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 37/115 (32%), Positives = 65/115 (56%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     V V+ ATNR + LD AL+RPGR DR++    PD   + RI  +H+   
Sbjct: 312 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRM 371

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
            LA+DV+  ++       +GAD++ +  EA ++A R    +++ ++   + E ++
Sbjct: 372 TLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 426

---

>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1459

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 52/117 (44%), Positives = 71/117 (60%), Gaps = 6/117 (5%)
 Frame = +3

Query: 3    LTEMDGFSG----NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEV 167
            L E+DG +G    + GV V+ ATNRPD+LD+ALLRPGRFD+ + +   D    +  ILE 
Sbjct: 1156 LAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEA 1215

Query: 168  HSRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISKDEISDAL 335
             +R  AL  DV  D+VA + P  +TGADL  L ++A + A  R  K  + DE  +AL
Sbjct: 1216 LTRKFALHPDVSLDRVAEQLPLTYTGADLYALCSDAMLKAITR--KATAVDEKINAL 1270

---

>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4|
          Length = 443

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 38/115 (33%), Positives = 64/115 (55%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF     V VL ATNR + LD AL+RPGR DR++    PD   + RI ++H+   
Sbjct: 316 LNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRM 375

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
            L K+V+ ++        +GAD++ +  EA +LA R     ++ ++   + E ++
Sbjct: 376 TLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVL 430

---

>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAY4)
          Length = 1024

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
 Frame = +3

Query: 3    LTEMDGFS--GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVR-ILEVHS 173
            L E+DG S  G  GV V+ ATNRPD+LD ALLRPGRFD+ + +   D   + + I+E  +
Sbjct: 845  LAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTHEKQQTIMEALT 904

Query: 174  RGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEI 308
            R   LA DV  + +++R P  FTGAD   L ++A + A  R   E+
Sbjct: 905  RKFRLAADVSLEAISKRCPFTFTGADFYALCSDAMLNAMTRTANEV 950

---

>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive|
           fusion protein 1) (NEM-sensitive fusion protein 1)
           (dNsf-1) (Protein comatose)
          Length = 745

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 42/119 (35%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG- 179
           LT++DG    + ++V+  TNR D++D ALLRPGR + Q+ +  P+  GRV+IL +H++  
Sbjct: 355 LTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRM 414

Query: 180 ---KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS-DALERI 344
                +  DVD  ++A  T  F+GA+L+ L+  A   A  R +K  +K  +  +A+E++
Sbjct: 415 REFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQSSAMNRLIKADAKVTVDPEAMEKL 473

---

>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein|
           6) (TBP-6)
          Length = 405

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 40/101 (39%), Positives = 60/101 (59%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L ++DGF  N  V V+AATNR D+LD ALLR GR DR++    P+   R RI+++HSR  
Sbjct: 298 LNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKM 357

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 305
            ++ DV+++++AR          +    EA ++A RR   E
Sbjct: 358 NVSPDVNYEELARCPTISMALSAKQFGVEAGMIALRRGATE 398

---

>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2|
          Length = 1091

 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG- 179
           L  MDG      ++V+ ATNR D +D AL RPGRFDR+     PD   R  IL++H+R  
Sbjct: 387 LALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDW 446

Query: 180 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 308
                D   +++A    G+ GAD++++  EAA+ A RR   +I
Sbjct: 447 NPKPLDTFLEELAENCVGYRGADIKSICAEAALCALRRRYPQI 489

---

>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18|
          Length = 758

 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 27/207 (13%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR-- 176
           L +MDG    + ++V+  TNR D++DSALLRPGRF+ QV +  PD  GR++I ++ ++  
Sbjct: 376 LAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKM 435

Query: 177 --GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL---KEISKDEISDALER 341
                ++ DV+  ++A  T  F+GA+++ L+  A+  A  + +   K  +K    D  + 
Sbjct: 436 RENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKDIAKL 495

Query: 342 IIAGPEKKNAV--------VSEQKRK------LVAYHEAGHALV--GA----LMPEYDPV 461
            +   +  NA+        +SE+  K      ++ Y E  ++++  GA     + E D  
Sbjct: 496 KVTREDFLNALNDVTPAFGISEEDLKTCVEGGMMLYSERVNSILKNGARYVRQVRESDKS 555

Query: 462 AKISIIPRGQAGGLTFFAXSEERLESG 542
             +S++  G AG       +E  L+SG
Sbjct: 556 RLVSLLIHGPAGSGKTALAAEIALKSG 582

---

>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
 Frame = +3

Query: 3   LTEMDGFSGNSG-----------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 149
           LT MDG  GN G           V+V+ ATNRPD LD AL R GRF+ ++ +  PD   R
Sbjct: 358 LTCMDG-PGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDAR 416

Query: 150 VRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 308
             IL V ++   L    D  ++AR TPGF GADL+++    A LA R+ +K I
Sbjct: 417 AEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESV----AYLAGRKAIKRI 465



 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L E+DG      V V+ ATNRPDV+D A LRPGRF   + V  P+   R  IL+  +R K
Sbjct: 653 LVELDG-GERRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKK 711

Query: 183 ALAKDVDFDKVARRT-PGFTGADLQNLMNEAAILAARRDL--KEISKDEISD 329
            +   VD D +A+    GF+GADL +L+ +A   A    +   E S+D+++D
Sbjct: 712 PIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSEDDVTD 763

---

>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS5)
          Length = 1165

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 48/102 (47%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
 Frame = +3

Query: 3    LTEMDGFSGNSG---VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVH 170
            L E+DG SG  G   V V+ ATNRPD+LD ALLRPGRFD+ + +   D    + +I+E  
Sbjct: 945  LAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEAL 1004

Query: 171  SRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARR 293
            SR   L   VD DKVA   P  FTGAD   L ++A + A  R
Sbjct: 1005 SRKFHLHPSVDLDKVAESCPFTFTGADFYALCSDAMLNAMTR 1046

---

>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)|
           (TBP-7)
          Length = 418

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 41/122 (33%), Positives = 65/122 (53%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDGF  N  V V+ ATNR D LD ALLRPGR DR++    PD   +  I    +   
Sbjct: 293 LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKM 352

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L+++VD +    R    +GAD+ ++  E+ +LA R +   +   +   A + +I   E+
Sbjct: 353 NLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQ 412

Query: 363 KN 368
           ++
Sbjct: 413 EH 414

---

>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7)
          Length = 418

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 41/122 (33%), Positives = 65/122 (53%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDGF  N  V V+ ATNR D LD ALLRPGR DR++    PD   +  I    +   
Sbjct: 293 LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKM 352

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L+++VD +    R    +GAD+ ++  E+ +LA R +   +   +   A + +I   E+
Sbjct: 353 NLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQ 412

Query: 363 KN 368
           ++
Sbjct: 413 EH 414

---

>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2|
          Length = 1390

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG- 179
           L  MDG      ++V+ ATNR D +D AL RPGRFDR+     PD   R  IL++H+R  
Sbjct: 556 LALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDW 615

Query: 180 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 308
                D   +++A    G+ GAD++++  EAA+ A RR   +I
Sbjct: 616 NPKPLDTFLEELAENCVGYCGADIKSICAEAALCALRRRYPQI 658

---

>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)|
          Length = 448

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   LTEMDGF-SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 179
           L ++DGF +    + V+ ATNR   LD AL+RPGR DR++  + PD A + +I  +H+  
Sbjct: 319 LNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSK 378

Query: 180 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
             L +DV+ +++ +     +GA+++ +++EA +LA R     +  D+   A E+++
Sbjct: 379 MNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVL 434

---

>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2|
          Length = 1040

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG- 179
           L  MDG      ++V+ ATNR D +D AL RPGRFDR+     PD   R  IL++H+R  
Sbjct: 211 LALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEILKIHTRDW 270

Query: 180 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI 308
                D+  +++A    G+ GAD++++  EAA+ A RR   +I
Sbjct: 271 NPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALRRRYPQI 313

---

>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 40/114 (35%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
 Frame = +3

Query: 3   LTEMDGFSGNSG-------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL 161
           L +MDG SG S        V+VLAATN P  +D AL R  R ++++ +  P++ GR ++L
Sbjct: 359 LIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPEIDGREQLL 416

Query: 162 EVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 323
            ++ +   LA D+D   +A +  G++GAD+ N+  +A+++A RR ++ +  +EI
Sbjct: 417 RINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMMAMRRRIQGLRPEEI 470

---

>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1198

 Score = 73.6 bits (179), Expect = 4e-13
 Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 7/109 (6%)
 Frame = +3

Query: 3    LTEMDGFSGNS-----GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILE 164
            L E+DG SG +     GV V+ ATNRPD+LD ALLRPGRFD+ + +   D    + +ILE
Sbjct: 965  LAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQSKILE 1024

Query: 165  VHSRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEI 308
              +R   LA +VD  ++A+R    FTGAD   L +++ + A  R   E+
Sbjct: 1025 ALTRKFKLADNVDLYEIAKRCSFTFTGADFYALCSDSMLNAMTRTANEV 1073

---

>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)|
          Length = 1388

 Score = 73.6 bits (179), Expect = 4e-13
 Identities = 58/180 (32%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
 Frame = +3

Query: 3    LTEMDGFSG----NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR-VRILEV 167
            L E+DG SG    + GV V+ ATNRPD+LD ALLRPGRFD+ + +   D   + ++ILE 
Sbjct: 1120 LAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEA 1179

Query: 168  HSRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 344
             +R   L   V    VA++ P  +TGAD   L ++A + A  R    +        +  +
Sbjct: 1180 LTRKFTLHPSVSLHSVAQQLPFTYTGADFYALCSDAMLKAVTRQAASVDA-----KIREL 1234

Query: 345  IAGPEKKNAVVSEQKRKLVAY---HEAGHALVGALMPEYD-PVAKISIIPRGQAGGLTFF 512
             A P  +   +S       AY   H A    +  ++ E D   A   ++P   AG L+ +
Sbjct: 1235 EAQPRSRTGPIS------TAYFFDHHATPEDIAVMVTEEDFLAANRELVPSVSAGELSHY 1288

---

>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1017

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
 Frame = +3

Query: 3    LTEMDGFSGNS-GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR-VRILEVHSR 176
            L E+DG S +  GV ++ ATNRPD+LD ALLRPGRFD+ + +   D   +   I+   +R
Sbjct: 844  LAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTREKQANIMRALTR 903

Query: 177  GKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISK 314
               ++ D++FD++    P  +TGAD   L ++A + A  R  KEI +
Sbjct: 904  KFKVSSDINFDELVSDFPFSYTGADFYALCSDAMLKAMTRISKEIDE 950

---

>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS8)
          Length = 1030

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
 Frame = +3

Query: 3    LTEMDGFSGNS-GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSR 176
            L E+DG S ++ GV V+ ATNRPD+LD ALLRPGRFD+ + +  PD    ++ ILE  +R
Sbjct: 858  LAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTR 917

Query: 177  GKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISK 314
               L  DV   ++A+  P  +TGAD   L ++A + A  R  + + K
Sbjct: 918  KFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAMSRIARMVEK 964

---

>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog|
          Length = 389

 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV-DRPDVAGRVRILEVHSRG 179
           LT+MDGF   + V V+ ATNR D LD ALLRPGR DR++      D   R  + +  +  
Sbjct: 262 LTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAK 321

Query: 180 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
             L+ +VD D    R    +GA +  +M +A +LA R+    I + +I +A  R +
Sbjct: 322 MLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAV 377

---

>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)|
           (Katanin ATPase-containing subunit)
          Length = 472

 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
 Frame = +3

Query: 3   LTEMDGFSG---NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHS 173
           L +MDG      +  V VLAATN P  LD AL R  RF++++ +  PD+  R +++E   
Sbjct: 318 LVQMDGSQNKFDSRRVFVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIEKSM 375

Query: 174 RGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR-DLKEISKDEISDALERIIA 350
            G   + ++++D +A RT GF+GAD+ +L   AAI   RR D K +   E++ A+E + A
Sbjct: 376 EGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLRRYDTKSLRGGELTAAMESLKA 435

---

>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 981

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRG 179
            L E+DG      V V+ ATNRPD+LD ALLRPGRFD+ V V    D A ++R+L   +R 
Sbjct: 831  LAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRK 890

Query: 180  KALAKDVDFDKVAR-RTPGFTGADLQNLMNEAAILAARRDLK------EISKDEISDALE 338
              L   V    V     P  TGADL +L ++A + A +R ++      E+    +   +E
Sbjct: 891  FKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLELRSSALLLTME 950

Query: 339  RIIAGPEKKNAVVSEQK 389
             ++    +    VSEQ+
Sbjct: 951  DLLQAAARLQPSVSEQE 967



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 26/97 (26%), Positives = 44/97 (45%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L + D  S    ++V+A T+R   L + +     F  ++ V     A R+ IL+  +   
Sbjct: 556 LLDEDALSRCPPLMVVATTSRVQDLPTDVQTA--FPHELEVPVLSEAQRLSILQALTAHL 613

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 293
            L ++V+  ++ARR  GF   DL  L+      A  R
Sbjct: 614 PLGQEVNLPQLARRCAGFVVGDLYALLTHTCRAACTR 650

---

>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1381

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 53/129 (41%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
 Frame = +3

Query: 3    LTEMDGFSGNSG----VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR-VRILEV 167
            L E+DG SG  G    V V+ ATNRPD+LD ALLRPGRFD+ + +   D   + V I+E 
Sbjct: 1117 LAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQVTIMEA 1176

Query: 168  HSRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRD--LKEISKDEISDALE 338
             +R   L   V    VA R P  +TGAD   L ++A + A  R   L +    E++ A  
Sbjct: 1177 LTRKFTLHPTVSLRSVAERLPFTYTGADFYALCSDAMLKAVTRQATLVDTKIRELNAA-- 1234

Query: 339  RIIAGPEKK 365
               AGPE K
Sbjct: 1235 ---AGPEGK 1240

---

>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 978

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 8/137 (5%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRG 179
            L E+DG      V V+ ATNRPD+LD ALLRPGRFD+ V V    D A ++R+L   +R 
Sbjct: 828  LAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRK 887

Query: 180  KALAKDVDFDKVAR-RTPGFTGADLQNLMNEAAILAARRDLKEISK--DEISDAL----E 338
              L   V    V     P  TGADL +L ++A + A +R ++++ +  +  S AL    E
Sbjct: 888  FKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLEPRSSALLLTME 947

Query: 339  RIIAGPEKKNAVVSEQK 389
             ++    +    VSEQ+
Sbjct: 948  DLLQAAARLQPSVSEQE 964



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 25/97 (25%), Positives = 46/97 (47%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L + D  S    ++V+A T+R   L + +     F  ++ V     + R+ +L+  +   
Sbjct: 555 LLDEDPLSRCPPLMVVATTSRVQDLPTDVRTA--FPHELEVPVLSESQRLSVLQALTAHL 612

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 293
            L ++V+  ++ARR  GF   DL  L+  A+  A  R
Sbjct: 613 PLGQEVNLSQLARRCAGFVVGDLYALLTHASRAACTR 649

---

>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
 Frame = +3

Query: 3   LTEMDGFSGNSG-------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL 161
           L +MDG  G S        V+VLAATN P  +D AL R  R ++++ +  P   GR  +L
Sbjct: 334 LVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELL 391

Query: 162 EVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 323
            +  R   LA DVD   +A    G++GAD+ N+  +A+++A RR ++ ++ +EI
Sbjct: 392 RISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI 445

---

>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B|
          Length = 414

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 38/115 (33%), Positives = 60/115 (52%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDGF  ++ V V+ ATNR D LD ALLRPGR DR++    PD   +  +        
Sbjct: 289 LNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRM 348

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
            L+ DVD +    R    +GAD+ ++  EA + A R +   +   ++  A + ++
Sbjct: 349 NLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVV 403

---

>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7) (CIP21)
          Length = 418

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 40/122 (32%), Positives = 62/122 (50%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDGF  N  V V+ ATNR D LD ALLRPGR DR++    PD   +  I    +   
Sbjct: 293 LNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKM 352

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 362
            L+++VD +    R    +GAD+ ++     +LA R     +   +   A + +I   E+
Sbjct: 353 NLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDFEKAYKTVIKKDEQ 412

Query: 363 KN 368
           ++
Sbjct: 413 EH 414

---

>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding|
           protein homolog 2)
          Length = 403

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 38/98 (38%), Positives = 57/98 (58%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDGF  +  V V+ ATNR D LD ALLRPGR DR++    PD   +  I +V +   
Sbjct: 278 LNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKM 337

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD 296
            L+ +VD +    R    +GA++Q++  EA + A R++
Sbjct: 338 NLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKN 375

---

>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1000

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
 Frame = +3

Query: 3    LTEMDGFS-GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSR 176
            L E+DG S G  GV V+ ATNRPD+LD ALLRPGRFD+ + +   D    +  I++  +R
Sbjct: 828  LAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANIIKALTR 887

Query: 177  GKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISK 314
               L   +D   +A++ P  +TGAD   L ++A + A  R   E+ +
Sbjct: 888  KFTLESGIDILDIAKKCPFNYTGADFYALCSDALLNAMTRVAGEVDE 934

---

>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
 Frame = +3

Query: 3   LTEMDGFSG-------NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL 161
           L +MDG  G       +  V+VLAATN P  +D AL R  R ++++ +  P   GR  +L
Sbjct: 331 LIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELL 388

Query: 162 EVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 323
           ++  R   L  D+  + +A +T G++GAD+ N+  +A+++A RR +  +S +EI
Sbjct: 389 KISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLMAMRRRINGLSPEEI 442

---

>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1135

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
 Frame = +3

Query: 3    LTEMDGFSG---NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVH 170
            L E+DG SG     GV V+ ATNRPD+LD ALLRPGRFD+ + +   D    + +I++  
Sbjct: 939  LAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQAL 998

Query: 171  SRGKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARRDLKEISK 314
            +R   L   VD  ++A   P  +TGAD   L ++A + A  R    + K
Sbjct: 999  TRKFQLDPSVDLGRIAETCPFTYTGADFYALCSDAMLNAMTRTAGAVEK 1047



 Score = 32.7 bits (73), Expect = 0.73
 Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
 Frame = +3

Query: 30  NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL-----EVHSRGK---A 185
           + G I + +TN  D +   +    +FD  ++++ P    R  IL     ++ ++ K    
Sbjct: 664 SKGAIFIGSTNDADAISELIRSKFKFD--ISINVPTEPERKLILTDLLDDMKTKDKTPVV 721

Query: 186 LAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 320
           L  DV  D +A ++ G T  DL ++++    +A  R L+ +S+++
Sbjct: 722 LRPDVSLDTLALQSAGLTANDLVSIVDNTITIAIER-LERLSEEQ 765

---

>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 980

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRG 179
            L E+DG      V V+ ATNRPD+LD ALLRPGRFD+ V V    D A ++R+L   +R 
Sbjct: 830  LAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRK 889

Query: 180  KALAKDVDFDKVAR-RTPGFTGADLQNLMNEAAILAARRDLKEISK------DEISDALE 338
              L   V    V     P  TGADL +L ++A   A +R + ++ +        +   +E
Sbjct: 890  FKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGLEPGSSALMLTME 949

Query: 339  RIIAGPEKKNAVVSEQK 389
             ++    +    VSEQ+
Sbjct: 950  DLLQAAARLQPSVSEQE 966

---

>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
 Frame = +3

Query: 3   LTEMDGFSG-------NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL 161
           L +MDG  G       +  V+VLAATN P  +D AL R  R ++++ +  P   GR  +L
Sbjct: 331 LIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELL 388

Query: 162 EVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 323
           ++  R   L  DV  + +A +T G++GAD+ N+  +A+++A RR +  +S +EI
Sbjct: 389 KISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLMAMRRRINGLSPEEI 442

---

>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog|
          Length = 387

 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 36/115 (31%), Positives = 61/115 (53%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDGF   + V V+ ATNR D +D ALLRPGR DR++    PD   +  +    +   
Sbjct: 262 LNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKM 321

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
           +L   VD + +  R    + AD+ ++  EA +LA R     +++ +  +A  +++
Sbjct: 322 SLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDFEEAYSKVV 376

---

>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 490

 Score = 68.9 bits (167), Expect = 9e-12
 Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
 Frame = +3

Query: 3   LTEMDGFSG-------NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL 161
           L +MDG  G       +  V+VLAATN P  +D AL R  R ++++ +  P   GR  +L
Sbjct: 333 LIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELL 390

Query: 162 EVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 323
           +++ R   L  D+  + +A +  G++GAD+ N+  +A+++A RR +  +S +EI
Sbjct: 391 KINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEI 444

---

>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 68.9 bits (167), Expect = 9e-12
 Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
 Frame = +3

Query: 3   LTEMDGFSGNSG-------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL 161
           L +MDG  G S        V+VLAATN P  +D AL R  R ++++ +  P   GR  +L
Sbjct: 334 LVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELL 391

Query: 162 EVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 323
            +  R   LA DV+   +A    G++GAD+ N+  +A+++A RR ++ ++ +EI
Sbjct: 392 RISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI 445

---

>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score = 68.9 bits (167), Expect = 9e-12
 Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
 Frame = +3

Query: 3   LTEMDGFSGNSG-------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL 161
           L +MDG  G S        V+VLAATN P  +D AL R  R ++++ +  P   GR  +L
Sbjct: 334 LVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELL 391

Query: 162 EVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 323
            +  R   LA DV+   +A    G++GAD+ N+  +A+++A RR ++ ++ +EI
Sbjct: 392 RISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI 445

---

>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Fragment)
          Length = 486

 Score = 68.9 bits (167), Expect = 9e-12
 Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
 Frame = +3

Query: 3   LTEMDGFSGNSG-------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRIL 161
           L +MDG  G S        V+VLAATN P  +D AL R  R ++++ +  P   GR  +L
Sbjct: 331 LVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELL 388

Query: 162 EVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 323
            ++ +   LA DV+ + +A    G++GAD+ N+  +A+++A RR ++ ++ +EI
Sbjct: 389 RINLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEI 442

---

>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)|
          Length = 415

 Score = 68.9 bits (167), Expect = 9e-12
 Identities = 37/98 (37%), Positives = 54/98 (55%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDGF   + V V+ ATNR D LD ALLRPGR DR++    PD   +  I    +   
Sbjct: 290 LNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKM 349

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD 296
            L+++VD ++   R    +GAD+  +  EA + A R +
Sbjct: 350 NLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVREN 387

---

>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 16/125 (12%)
 Frame = +3

Query: 3   LTEMDGFSGNSG--------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRI 158
           L ++DG S  +         V+VLAATN P  +D AL R  R ++++ +  PD   R  +
Sbjct: 364 LVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESRKAL 421

Query: 159 LEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR--------DLKEISK 314
           + ++ R   +A DV+ + VARRT G++G DL N+  +A++   RR        ++K +SK
Sbjct: 422 ININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSK 481

Query: 315 DEISD 329
           D+IS+
Sbjct: 482 DDISN 486

---

>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)|
           (TAT-binding homolog 2)
          Length = 428

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHSRG 179
           LT+MDGF  ++ V V+ ATNR D LD ALLRPGR DR++      D   R  I    +  
Sbjct: 300 LTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRERRLIFGTIASK 359

Query: 180 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDA 332
            +LA + D D +  R    +GA +  +M EA + A R++   I + ++ +A
Sbjct: 360 MSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEA 410

---

>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1021

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
 Frame = +3

Query: 3    LTEMDGFS-GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV-AGRVRILEVHSR 176
            L E+DG S G  G+ V+ ATNRPD+LD ALLRPGRFD+ + +   D    +  IL   +R
Sbjct: 849  LAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANILRALTR 908

Query: 177  GKALAKDVDFDKVARRTP-GFTGADLQNLMNEAAILAARR 293
               L  DV  D +A   P  +TGAD   L ++A + A  R
Sbjct: 909  KFTLDPDVSLDDLAASCPFTYTGADFYALCSDAMLNAMTR 948

---

>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 948

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
 Frame = +3

Query: 3    LTEMDGFS--GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVRILEVHS 173
            L E+D  S   N  V V+ ATNRPD+LD +LLRPGRFD+ V +        +  +L   +
Sbjct: 781  LAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALT 840

Query: 174  RGKALAKDVDFDKVARRT-PGFTGADLQNLMNEAAILAARRDLKEI 308
            +   L + +D +++A+   P FTGAD+  L ++A + A +R   EI
Sbjct: 841  KTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEI 886

---

>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B|
          Length = 362

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 42/129 (32%), Positives = 72/129 (55%)
 Frame = +3

Query: 30  NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 209
           N  VI++ ATNRP  LDSA+LR  R   +  +++P+V  R  IL++    + +   V+  
Sbjct: 232 NCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKDILKLILENENVESAVELS 289

Query: 210 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQK 389
           ++A++T GF+G+DL+ +  +AA+L  R  + + S +E      R I   + + A+   +K
Sbjct: 290 EIAKQTDGFSGSDLREMCRDAALLCVRDFVHQESPEE---DFIRPIRQEDLQRAIEKMKK 346

Query: 390 RKLVAYHEA 416
            K    HEA
Sbjct: 347 SKSAGVHEA 355

---

>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog|
          Length = 423

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV-DRPDVAGRVRILEVHSRG 179
           L +MDGF  +S V V+ ATNR D LD ALLRPGR DR++      D   R  I    +  
Sbjct: 294 LNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASK 353

Query: 180 KALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD-LKEISKDEISDA 332
            +L+ +VD D +  R    +GA +  +M EA + A R++    I + ++ DA
Sbjct: 354 MSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIPRSDLEDA 405

---

>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494|
          Length = 371

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 36/116 (31%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTE+DG   N GV+ +AATN P +LD A+    RF+ ++    P+   R++I+E++++  
Sbjct: 246 LTELDGIKENEGVVTIAATNNPAMLDPAI--RSRFEEEIEFKLPNDEERLKIMELYAKKM 303

Query: 183 ALAKDVDFDKVARRTPGFTGADL-QNLMNEAAILAARRDLKEISKDEISDALERII 347
            L    +  +   +T GF+G D+ +  +  A   A   D   +SK+++  AL++I+
Sbjct: 304 PLPVKANLKEFVEKTKGFSGRDIKEKFLKPALHRAILEDRDYVSKEDLEWALKKIL 359

---

>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)|
          Length = 69

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
 Frame = +3

Query: 39  VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 218
           V+VLA TNRPDVLD AL+RPGRF RQ+    P + GR  I +VH R   L K ++ D +A
Sbjct: 1   VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLA 60

Query: 219 RR----TPG 233
           R+    TPG
Sbjct: 61  RKLAVLTPG 69

---

>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome|
           AAA-ATPase subunit RPT3) (Regulatory particle triple-A
           ATPase subunit 3)
          Length = 408

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 35/98 (35%), Positives = 53/98 (54%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDGF     V V+ ATNR D LD ALLRPGR DR++    PD   +  + +V +   
Sbjct: 283 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKM 342

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD 296
            L+ +VD +    R    + A++  +  EA + A R++
Sbjct: 343 NLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKN 380

---

>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog|
          Length = 413

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 35/98 (35%), Positives = 52/98 (53%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           L +MDGF     V V+ ATNR D LD ALLRPGR DR++    PD   +  + +V +   
Sbjct: 288 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKM 347

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD 296
            L  +VD +    R    + A++  +  EA + A R++
Sbjct: 348 NLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKN 385

---

>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 38/123 (30%), Positives = 69/123 (56%)
 Frame = +3

Query: 39  VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 218
           VIV+ ATNRP  LDSA++R  R   +  +++P +  R  IL++  + + + + VD  +VA
Sbjct: 231 VIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVA 288

Query: 219 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL 398
           + T GF+G+DL+ +  +AA+L  R  +   S++   +   R +   +   A+   +K K 
Sbjct: 289 QETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKD 348

Query: 399 VAY 407
            A+
Sbjct: 349 AAF 351

---

>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 38/123 (30%), Positives = 69/123 (56%)
 Frame = +3

Query: 39  VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 218
           VIV+ ATNRP  LDSA++R  R   +  +++P +  R  IL++  + + + + VD  +VA
Sbjct: 231 VIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVA 288

Query: 219 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL 398
           + T GF+G+DL+ +  +AA+L  R  +   S++   +   R +   +   A+   +K K 
Sbjct: 289 QETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKD 348

Query: 399 VAY 407
            A+
Sbjct: 349 AAF 351

---

>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 38/123 (30%), Positives = 69/123 (56%)
 Frame = +3

Query: 39  VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVA 218
           VIV+ ATNRP  LDSA++R  R   +  +++P +  R  IL++  + + + + VD  +VA
Sbjct: 231 VIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVA 288

Query: 219 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKRKL 398
           + T GF+G+DL+ +  +AA+L  R  +   S++   +   R +   +   A+   +K K 
Sbjct: 289 QETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKD 348

Query: 399 VAY 407
            A+
Sbjct: 349 AAF 351

---

>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG + N GV+ + ATN P++LD A+    RF+ ++    PD   R  +LE +    
Sbjct: 249 LTEMDGINQNWGVVTIGATNNPELLDKAI--RSRFEEEIEFKLPDDEERKLMLEKYIETM 306

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAI-LAARRDLKEISKDEISDAL-ERIIAGP 356
            L  D   DK+ + T   +G D+++ + + A+  A   D + +  + I  AL ER ++G 
Sbjct: 307 PLKVDFPVDKLVKLTREMSGRDIKDRVLKTALHRAIAEDSESVRAEHIEYALKERKVSGE 366

Query: 357 EK 362
            K
Sbjct: 367 PK 368

---

>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           LTEMDG + N GV+ + ATN P++LD+A+    RF+ ++    P    R  +LE +    
Sbjct: 249 LTEMDGINQNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLPGDDERRMMLEKYIETM 306

Query: 183 ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRD-LKEISKDEISDALE 338
            L  D   DK+ + T G +G D++  + + A+  A  D    + ++ I  AL+
Sbjct: 307 PLDVDFSVDKLVKLTKGMSGRDIKERVLKTALHRALADESPRVEREHIEYALK 359

---

>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 34/100 (34%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
 Frame = +3

Query: 3   LTEMDGFS-GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH--S 173
           L +M G    N G++VL ATN P VLDSA+ R  RF++++ +  P+   R  +  +H  S
Sbjct: 259 LVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAAMFRLHLGS 316

Query: 174 RGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 293
              +L  + DF ++ R+T G++GAD+  ++ +A +   R+
Sbjct: 317 TQNSLT-EADFQELGRKTDGYSGADISIIVRDALMQPVRK 355

---

>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)|
          Length = 362

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
           +T  DG   N  V+++ ATNR + +D A LR  R  ++  V  P    R +IL V  +  
Sbjct: 217 MTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDT 274

Query: 183 ALAKD-VDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKE 305
            L +D  D   +A  T GF+G+DL+ L  EAA+ AA+  +K+
Sbjct: 275 KLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKEYIKQ 316

---

>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
 Frame = +3

Query: 3   LTEMDGFS-GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH-SR 176
           L +M G    N G++VL ATN P VLDSA+ R  RF++++ +  P+   R  + ++H   
Sbjct: 259 LVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHLGT 316

Query: 177 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 293
            +    + DF ++ R+T G++GAD+  ++ +A +   R+
Sbjct: 317 TQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRK 355

---

>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A|
          Length = 380

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 32/103 (31%), Positives = 59/103 (57%)
 Frame = +3

Query: 30  NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFD 209
           NS V+V+ ATNRP  +D+A+LR  R      V  P+ A R  IL +   G+ L+  ++  
Sbjct: 231 NSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLK 288

Query: 210 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE 338
           ++A ++ G++G+DL+ L  +AA+   R  +++    +I+   +
Sbjct: 289 EIASQSEGYSGSDLKELCRDAAMYRVRDYVRKQQMKQIAQQFQ 331

---

>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a|
          Length = 437

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
 Frame = +3

Query: 3   LTEMDGFSGNS-GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH-SR 176
           L +M G   N+ G +VL ATN P VLDSA+ R  RF++++ +  P+ A R ++  +H   
Sbjct: 252 LVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGS 309

Query: 177 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 293
                 D +  ++AR+T G++GAD+  ++ ++ +   R+
Sbjct: 310 TPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348

---

>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)|
           (VPS4-1)
          Length = 437

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
 Frame = +3

Query: 3   LTEMDGFSGNS-GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH-SR 176
           L +M G   N+ G +VL ATN P VLDSA+ R  RF++++ +  P+ A R ++  +H   
Sbjct: 252 LVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGS 309

Query: 177 GKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 293
                 D +  ++AR+T G++GAD+  ++ ++ +   R+
Sbjct: 310 TPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348

---

>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants|
          Length = 432

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 35/100 (35%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
 Frame = +3

Query: 3   LTEMDGFSGN-SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRG 179
           L +M+G   + SGV+VL ATN P  LDSA+ R  RF++++ +  P+   R R+ E++  G
Sbjct: 253 LVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNV-G 309

Query: 180 KALAK--DVDFDKVARRTPGFTGADLQNLMNEAAILAARR 293
           K  ++    DF ++A+ T G++G+D+  ++ +A +   RR
Sbjct: 310 KIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVRR 349

---

>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c|
          Length = 609

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 23/45 (51%), Positives = 34/45 (75%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 137
           L+E+DG  G   VIV+ A+NR D++D A+LRPGR D ++ ++RPD
Sbjct: 397 LSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPD 441

---

>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175|
          Length = 609

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 23/45 (51%), Positives = 34/45 (75%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 137
           L+E+DG  G   VIV+ A+NR D++D A+LRPGR D ++ ++RPD
Sbjct: 397 LSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPD 441

---

>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316|
          Length = 609

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 23/45 (51%), Positives = 34/45 (75%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 137
           L+E+DG  G   VIV+ A+NR D++D A+LRPGR D ++ ++RPD
Sbjct: 397 LSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPD 441

---

>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
 Frame = +3

Query: 3   LTEMDGF--SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE--VH 170
           L E DG   +G+  V+V+ ATNRP  LD A+LR  RF ++V V  P+   R+ +L+  + 
Sbjct: 466 LIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLC 523

Query: 171 SRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 302
            +G  L +  +  ++AR T G++G+DL  L  +AA L   R+LK
Sbjct: 524 KQGSPLTQK-ELAQLARMTDGYSGSDLTALAKDAA-LGPIRELK 565

---

>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
 Frame = +3

Query: 3   LTEMDGF--SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE--VH 170
           L E DG   +G+  V+V+ ATNRP  LD A+LR  RF ++V V  P+   R+ +L+  + 
Sbjct: 464 LIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLC 521

Query: 171 SRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLK 302
            +G  L +  +  ++AR T G++G+DL  L  +AA L   R+LK
Sbjct: 522 KQGSPLTQK-ELAQLARMTDGYSGSDLTALAKDAA-LGPIRELK 563

---

>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13|
           protein) (DOA4-independent degradation protein 6)
          Length = 437

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 34/100 (34%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
 Frame = +3

Query: 3   LTEMDGFSGNS-GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH--S 173
           L +M+G   +S GV+VL ATN P  LDSA+ R  RF+R++ +  PD+A R  + E++   
Sbjct: 257 LVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAARTTMFEINVGD 314

Query: 174 RGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARR 293
               L K+ D+  +   T G++G+D+  ++ +A +   R+
Sbjct: 315 TPCVLTKE-DYRTLGAMTEGYSGSDIAVVVKDALMQPIRK 353

---

>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)|
          Length = 754

 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
 Frame = +3

Query: 30  NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILE-VHSRGKALAKDVDF 206
           +S V+VL ATN P  +D A  R  RF R++ +  PD   R+  L+ + ++ K   +D+D+
Sbjct: 616 DSRVLVLGATNLPWAIDDAARR--RFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDY 673

Query: 207 DKVARRTPGFTGADLQNLMNEAAILAAR--------RDLKEISKDEISDALERIIAGPEK 362
           + +   T GF+G+DL +L  EAA+   R         D  +I   EI D    ++     
Sbjct: 674 ELITEMTEGFSGSDLTSLAKEAAMEPIRDLGDKLMFADFDKIRGIEIKDFQNALLT---I 730

Query: 363 KNAVVSEQKRK 395
           K +V SE  +K
Sbjct: 731 KKSVSSESLQK 741

---

>YCF2_ANTFO (Q859W7) Protein ycf2|
          Length = 2392

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
 Frame = +3

Query: 36   GVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKAL---AKDVDF 206
            G+I++ +T+ P  +D AL+ P R D+ + +   D+  R     +    K      K + F
Sbjct: 1768 GIIIIGSTHLPRKVDPALISPNRLDKLMNIRIIDIFERQEKFSILLHSKRFYFKNKLLHF 1827

Query: 207  DKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQ 386
            ++ A RT G+ G DL  L NE +++   +    I  D +  AL R   G    N  +   
Sbjct: 1828 NEFAYRTMGYNGRDLVALANEVSLINTTQGNSTIYIDAVRLALHRQTLGFTYINNQMLFC 1887

Query: 387  KRKLVAYHEAGHALVGALMPEYDPVAKISI 476
            + + V  H+ G A++  +  +  P+  + I
Sbjct: 1888 QNEGVLLHKIGKAVIQNIFIKIFPMNPLYI 1917

---

>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)|
          Length = 497

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
 Frame = +3

Query: 39  VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSR--GKALAKDVDFDK 212
           V V+A  N  D+L   ++R GRFD    +D P++  R  I ++H +       K  D+ K
Sbjct: 361 VFVVATANNVDLLPLEIIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKK 420

Query: 213 VARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEQKR 392
           +A+ +  F+GA+++  + EA   A  +  +E + D+I  AL+++I   + +N+    Q  
Sbjct: 421 LAQLSESFSGAEIRQSIIEAMYQAFDQQ-REFTTDDICLALKQLIPLAQLENS----QTL 475

Query: 393 KLVAYHEAG 419
           KL ++  +G
Sbjct: 476 KLQSWASSG 484

---

>SAP1_YEAST (P39955) Protein SAP1|
          Length = 897

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
 Frame = +3

Query: 6    TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP-DVAGRVRILEVHSRGK 182
            ++ +G   ++ V+VLAATN P  +D A  R  RF R+  +  P D    V+  ++ S  K
Sbjct: 751  SDTNGDEDDTRVLVLAATNLPWSIDEAARR--RFVRRQYIPLPEDQTRHVQFKKLLSHQK 808

Query: 183  ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 299
                + DFD++ + T G++G+D+ +L  +AA +   RDL
Sbjct: 809  HTLTESDFDELVKITEGYSGSDITSLAKDAA-MGPLRDL 846

---

>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46|
          Length = 506

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
 Frame = +3

Query: 33  SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKD---VD 203
           S V V+A  N  D L   LLR GRFD    +  PD+  R  I +VH + K   K     D
Sbjct: 375 SPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLK-KIRPKSWSTYD 433

Query: 204 FDKVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
            + ++ ++  F+GA+++  + EA  +A   + +E +  +I ++L+R++
Sbjct: 434 TEILSAQSNRFSGAEIEESIYEAMHIAFNEN-REFTTSDILNSLKRVV 480

---

>FTSH_POPEU (P84578) Cell division protein ftsH homolog, chloroplast (EC|
           3.4.24.-) (Fragments)
          Length = 47

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 19/28 (67%), Positives = 25/28 (89%)
 Frame = +3

Query: 210 KVARRTPGFTGADLQNLMNEAAILAARR 293
           ++ ++TPGF+GADL NL+NEAAILA RR
Sbjct: 20  ELLQKTPGFSGADLANLLNEAAILAGRR 47

---

>YCX9_CHLRE (Q32065) Hypothetical 341.7 kDa protein in psbD-psbC intergenic|
            region (ORF2971) (ORFB)
          Length = 2971

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 27/99 (27%), Positives = 41/99 (41%)
 Frame = +3

Query: 3    LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGK 182
            L  +D    N G +V A T+ P VLD AL RPGR D  + +     +  +          
Sbjct: 2300 LVIIDSVRSNKGFVVFATTDIPHVLDPALRRPGRLDETICLPNIHTSNILN--------- 2350

Query: 183  ALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDL 299
               K+ +  K A+ T  F    + N M      + +RD+
Sbjct: 2351 -FTKNYEIFKSAKDTSNFGKKIILNEMQNLTTTSTQRDM 2388

---

>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1|
          Length = 456

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 125
           L  +DG + +   I    TN P+ LD+A++RPGR D +V V
Sbjct: 346 LNALDGVTSSEETITFMTTNHPEKLDAAIMRPGRIDYKVFV 386

---

>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)|
          Length = 491

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
 Frame = +3

Query: 39  VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVH---SRGKALAKDVDFD 209
           V V+A  N    L S +LR GRFD    +D P+   R  I ++H    R K+  ++ +  
Sbjct: 361 VFVVATANTIQNLPSEMLRKGRFDEIFFLDLPNNEERELIFQIHLARIRPKSW-QNYNIK 419

Query: 210 KVARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERII 347
           +++     F+GA+++  + E+   A   + +E S ++I  ALE+ I
Sbjct: 420 QLSLLCNKFSGAEIEQAIVESMHTAFSEE-REFSTEDIKIALEQFI 464

---

>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 449

 Score = 36.6 bits (83), Expect = 0.050
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 110
           L  +DG + +   I+   TN P+ LD AL+RPGR D
Sbjct: 328 LNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVD 363

---

>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)|
          Length = 419

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 110
           L  +DG +     IV   TN  D LD AL+RPGR D
Sbjct: 313 LNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVD 348

---

>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL|
          Length = 330

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
 Frame = +3

Query: 45  VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARR 224
           ++AATN    LD+A+ R  RFD  +  DRP+ A   R L++  +   +A D   +  A  
Sbjct: 221 LIAATNLDRSLDAAIWR--RFDEVLWFDRPEAAMIGRFLKLKFKNVPVAFDPARNSAA-- 276

Query: 225 TPGFTGADLQNLMNEA--AILAARRDLKEISKDEISDALE 338
             G++ A+++ +  +A  A++  RR  K++ + + + AL+
Sbjct: 277 LEGYSFAEIERVCTQAIKAMIIERR--KQVQERDFNRALQ 314

---

>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 419

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 110
           L  +DG +     IV   TN  D LD AL+RPGR D
Sbjct: 313 LNALDGVASTEARIVFMTTNHIDRLDPALIRPGRVD 348

---

>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 418

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 110
           L  +DG +     IV   TN  D LD AL+RPGR D
Sbjct: 313 LNALDGVASTEARIVFMTTNYIDRLDPALIRPGRVD 348

---

>RECA_MYCTU (P0A5U4) Protein recA (Recombinase A) [Contains: Endonuclease|
           PI-MtuI (EC 3.1.-.-) (Mtu recA intein)]
          Length = 790

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
 Frame = -2

Query: 299 QITTGGKD----GSLIHQVLKISTGETRCPS-GNLIKVHILR-QCLSSGVNLKDPDTAGY 138
           + TTGGK      S+   V ++ T +    + GN  +V +++ +CL+ G  + DP T   
Sbjct: 208 ETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNKCLAEGTRIFDPVTGTT 267

Query: 137 IR---TVDGDLPIEPPWPQKRGVKHIRPV 60
            R    VDG  PI      K G  H RPV
Sbjct: 268 HRIEDVVDGRKPIHVVAAAKDGTLHARPV 296

---

>RECA_MYCBO (P0A5U5) Protein recA (Recombinase A) [Contains: Endonuclease|
           PI-MboI (EC 3.1.-.-) (Mbo recA intein)]
          Length = 790

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
 Frame = -2

Query: 299 QITTGGKD----GSLIHQVLKISTGETRCPS-GNLIKVHILR-QCLSSGVNLKDPDTAGY 138
           + TTGGK      S+   V ++ T +    + GN  +V +++ +CL+ G  + DP T   
Sbjct: 208 ETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVKNKCLAEGTRIFDPVTGTT 267

Query: 137 IR---TVDGDLPIEPPWPQKRGVKHIRPV 60
            R    VDG  PI      K G  H RPV
Sbjct: 268 HRIEDVVDGRKPIHVVAAAKDGTLHARPV 296

---

>C1TM_YEAST (P09440) C-1-tetrahydrofolate synthase, mitochondrial precursor|
           (C1-THF synthase) [Includes: Methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate
           synthetase (EC 6.3.
          Length = 975

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
 Frame = +3

Query: 42  IVLAATNRPDVLDSALLRPGRFDRQVTVDR-PDVAGRVRILEVHSRGKALAKDVDFDKVA 218
           IV+AA   P  + S  ++ G     V ++  PD++ +         G+ L  DVDFD V 
Sbjct: 240 IVIAACGIPQYVKSDWIKEGAVVIDVGINYVPDISKK--------SGQKLVGDVDFDSVK 291

Query: 219 RRT------PGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVS 380
            +T      PG  G     ++    +LAA+R   E  K  +   L   +  P   +  +S
Sbjct: 292 EKTSYITPVPGGVGPMTVAMLVSNVLLAAKRQFVESEKLPVIKPLPLHLESPVPSDIDIS 351

---

>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 420

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 3   LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 110
           L  +DG + +   IV   TN  + LD AL+RPGR D
Sbjct: 314 LNALDGVASSEARIVFMTTNFIERLDPALVRPGRVD 349

---

>ISPG_SYNP6 (Q5N3W3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 407

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -2

Query: 560 VAPAVQSRLEPLFAXSKERETTSLTSRNDGNLGNRVIFRHQGTDEGM 420
           +   ++  LEPL    +E++       N G+L  R++F +  T EGM
Sbjct: 148 IGKQIRDTLEPLVTSLREQDKAMRIGVNHGSLAERMLFTYGDTPEGM 194

---

>RL14_LUMRU (O46160) 60S ribosomal protein L14|
          Length = 152

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
 Frame = +3

Query: 132 PDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEI- 308
           PD    V I++V  + +AL  D     VAR++  F   +L NL  +    A    +K+  
Sbjct: 19  PDQGKLVAIVDVIDQNRALV-DGPCTHVARKSMNFKELELTNLKAKFPHSAKTGVVKKAW 77

Query: 309 SKDEISDALE-----RIIAGPEKKNAVVSEQKRKLVAYHEAGHALV 431
            KDEIS   E     + IA  EK+  +   ++ KL+   +A + L+
Sbjct: 78  EKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRLI 123

---

>PCDG8_PANTR (Q5DRB2) Protocadherin gamma A8 precursor (PCDH-gamma-A8)|
          Length = 932

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 84  ALLRPGRFDRQ-VTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNL 260
           +L+  GR DR+ +    P     + IL V  +GK    +++   +    P F   DL+  
Sbjct: 83  SLVTAGRIDREELCAQSPRCLININIL-VEDKGKLFGIEIEIVDINDNNPKFQVEDLEVK 141

Query: 261 MNEAAILAARRDLKE 305
           +NE A+  AR  L E
Sbjct: 142 INEIAVPGARYPLPE 156

---

>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein|
           stubble-stubbloid) [Contains: Serine proteinase stubble
           non-catalytic chain; Serine proteinase stubble catalytic
           chain]
          Length = 787

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = -3

Query: 217 ATLSKSTSFANAFPLE*TSRILTRPATSGRSTVTCRSNRPGRRSAESSTSGLLVAASTMT 38
           +T S ++S  +      T+R  T P T+ R T T +  RP +R   +++S      S+ T
Sbjct: 405 STTSTTSSTTSTTTTTTTTRRTTTPTTTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSKT 464

Query: 37  P 35
           P
Sbjct: 465 P 465

---

>QUEA_THIDA (Q3SH62) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC|
           5.-.-.-) (Queuosine biosynthesis protein queA)
          Length = 344

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 21/71 (29%), Positives = 34/71 (47%)
 Frame = +3

Query: 132 PDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRDLKEIS 311
           PDV G  R+L V + G         D++ R  P   GAD   +MN+  ++ AR   ++ S
Sbjct: 20  PDVRGASRLLHVTAAGAL------HDRMFRELPTLLGADDLLVMNDTRVIKARLFGEKDS 73

Query: 312 KDEISDALERI 344
              +   +ER+
Sbjct: 74  GGRVELLVERV 84

---

>SYI_GLOVI (Q7NF75) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 983

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 345 IAGPEKKNAVVSEQKRKLVAYHEAGHALVGALMPEYDPVAKISI 476
           IA PE    + +E   +L A+H+    L+ AL+ E D + +I++
Sbjct: 230 IAAPETATVMAAELLPRLSAFHDREEELIDALLGERDDLPEIAV 273

---

>PCDG8_HUMAN (Q9Y5G5) Protocadherin gamma A8 precursor (PCDH-gamma-A8)|
          Length = 932

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +3

Query: 84  ALLRPGRFDRQ-VTVDRPDVAGRVRILEVHSRGKALAKDVDFDKVARRTPGFTGADLQNL 260
           +L+  GR DR+ +    P     +  L V  +GK    +++   +    P F   DL+  
Sbjct: 83  SLITAGRIDREELCAQSPRCLININTL-VEDKGKLFGVEIEIIDINDNNPKFQVEDLEVK 141

Query: 261 MNEAAILAARRDLKE 305
           +NE A+  AR  L E
Sbjct: 142 INEIAVPGARYPLPE 156

---

>PRP5_YEAST (P21372) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 849

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = +3

Query: 219 RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSE 383
           R + GF G  L+N+ ++    A  +DL+    D+ SD LE+ I+ P + +  VSE
Sbjct: 677 RLSKGFGGKGLENIKSKREE-AQNKDLELKKNDKRSDDLEKKISNPREGHDSVSE 730

---

>ISPG_SYNPX (Q7U712) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 398

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
 Frame = -2

Query: 560 VAPAVQSRLEPLFAXSKERETTSLTSRNDGNLGNRVIFRHQGTDEGM--SSLMVSHKLPL 387
           +   +    EPL    +++        N G+L  R++F +  T +GM  S++        
Sbjct: 142 IGARIHETFEPLVTLLRDQNKALRIGVNHGSLAERMLFTYGDTPKGMVESAMEFVRICDE 201

Query: 386 LF*NNCILLLRPSNDPLQSIRDLVLAYLLQITTGGKDG 273
           L  +N ++ ++ S  P+     ++ AY L   T  K+G
Sbjct: 202 LDFHNIVISMKASRAPV-----MLAAYRLMADTMDKEG 234


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,189,449
Number of Sequences: 219361
Number of extensions: 1739441
Number of successful extensions: 6551
Number of sequences better than 10.0: 262
Number of HSP's better than 10.0 without gapping: 6093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6452
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---