ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62k10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full ... 1033 0.0
2dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 589 e-165
3dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 583 e-163
4gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full ... 482 e-133
5gb|AY103957.1| Zea mays PCO116832 mRNA sequence 474 e-130
6ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent pepti... 303 3e-79
7gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH pr... 303 3e-79
8gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH pr... 303 3e-79
9emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease 295 8e-77
10emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Co... 295 8e-77
11dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 272 1e-69
12gb|DQ339462.1| Vitis pseudoreticulata ATPase mRNA, complete cds 272 1e-69
13dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic D... 272 1e-69
14emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein 262 1e-66
15emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial 258 2e-65
16dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH prot... 226 6e-56
17ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-d... 184 2e-43
18gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genom... 184 2e-43
19gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, comp... 184 2e-43
20gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, comple... 170 3e-39
21dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 123 7e-25
22gb|CP000097.1| Synechococcus sp. CC9902, complete genome 82 2e-12
23emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome;... 70 9e-09
24gb|CP000110.1| Synechococcus sp. CC9605, complete genome 62 2e-06
25gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full i... 56 1e-04
26emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segmen... 54 5e-04
27gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 52 0.002
28gb|AE009302.1| Agrobacterium tumefaciens str. C58 linear chromos... 46 0.12
29gb|AE008312.1| Agrobacterium tumefaciens str. C58 linear chromos... 46 0.12
30gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 46 0.12
31ref|XM_782306.1| PREDICTED: Strongylocentrotus purpuratus simila... 46 0.12
32emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; se... 46 0.12
33emb|AJ488199.1|PVI488199 Uncultured bacterium gene for putative ... 46 0.12
34dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 46 0.12
35gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 46 0.12
36emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se... 44 0.49
37emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 44 0.49
38gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 44 0.49
39gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complet... 42 1.9
40gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 42 1.9
41dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 42 1.9
42dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.9
43ref|NM_115254.3| Arabidopsis thaliana binding / transporter AT3G... 40 7.7
44gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 40 7.7
45gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 40 7.7
46gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 7.7
47gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome... 40 7.7
48gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, compl... 40 7.7
49gb|BT011963.1| Arabidopsis thaliana At3g53940 mRNA sequence 40 7.7
50emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete ch... 40 7.7
51ref|XM_499951.1| Yarrowia lipolytica CLIB122, YALI0A10615g predi... 40 7.7
52gb|AF259761.1| Ovis aries microsatellite MNS-89 sequence 40 7.7
53gb|AE008912.1| Salmonella typhimurium LT2, section 216 of 220 of... 40 7.7
54emb|AL627284.1| Salmonella enterica serovar Typhi (Salmonella ty... 40 7.7
55emb|AL132960.2|ATF5K20 Arabidopsis thaliana DNA chromosome 3, BA... 40 7.7
56gb|AF236051.1| California sea lion herpesvirus terminase gene, p... 40 7.7
57gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 7.7
58gb|AY093262.1| Arabidopsis thaliana putative protein (F5K20.24) ... 40 7.7
59gb|AY062478.1| Arabidopsis thaliana putative protein (F5K20.24) ... 40 7.7
60gb|AF193618.1|AF193618 California sea lion herpesvirus terminase... 40 7.7
61emb|BX822250.1|CNS0A70P Arabidopsis thaliana Full-length cDNA Co... 40 7.7
62emb|BX824565.1|CNS0A4VO Arabidopsis thaliana Full-length cDNA Co... 40 7.7
63gb|AC068279.6| Homo sapiens BAC clone RP11-153P14 from 2, comple... 40 7.7
64gb|AE004548.1| Pseudomonas aeruginosa PAO1, section 109 of 529 o... 40 7.7
65gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 7.7
66ref|XM_345541.2| PREDICTED: Rattus norvegicus similar to Ubiquit... 40 7.7
67gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complet... 40 7.7
68dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 40 7.7
69emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.7
70gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 40 7.7
71gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 7.7
72emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 7.7 
>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA
           sequence
          Length = 1556

 Score = 1033 bits (521), Expect = 0.0
 Identities = 553/564 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgctcacggagatggacggcttctccggaaacagcggtgtcatcgtgctcgccgcgacca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgctcacggagatggacggcttctccggaaacagcggtgtcatcgtgctcgccgcgacca 433

                                                                       
Query: 61  acaggccggatgtgcttgactccgcgcttctgcggccagggcggttcgatcggcaggtca 120
           |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 434 acaggccggatgtgctcgactcggcgcttctgcggccagggcggtttgatcggcaggtca 493

                                                                       
Query: 121 ccgtcgaccgtccggatgtagccggccgtgtcaggatccttgaggttcactccagaggaa 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ccgtcgaccgtccggatgtcgccggccgtgtcaggatccttgaggttcactccagaggaa 553

                                                                       
Query: 181 aggcattggcgaaggatgtggactttgataaggttgccagaaggacacctggtttcaccg 240
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aggcattggcgaaggatgtagactttgataaggttgccagaaggacacctggtttcaccg 613

                                                                       
Query: 241 gtgctgatcttcagaacttgatgaatgaggctgccatccttgccgcccgtcgtgatctga 300
           ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 614 gtgctgatcttcagaacttgatgaatgaggctgccatccttgctgctcgtcgtgatctga 673

                                                                       
Query: 301 aggagataagcaaggacgagatctctgatgctctggagaggatcattgctgggcctgaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aggagataagcaaggacgagatctctgatgctctggagaggatcattgctgggcctgaga 733

                                                                       
Query: 361 agaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctggac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 agaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctggac 793

                                                                       
Query: 421 atgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcattc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 atgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcattc 853

                                                                       
Query: 481 ctcgaggtcaggctggtggtctcacgttctttgctncaagcgaagagaggctcgagtctg 540
           |||||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||||
Sbjct: 854 ctcgaggtcaagctggtgggctcacgttctttgctccaagcgaagagaggcttgagtctg 913

                                   
Query: 541 gactgtacagcaggagctacctag 564
           ||||||||||||||||||||||||
Sbjct: 914 gactgtacagcaggagctacctag 937
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>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full
            insert sequence
          Length = 2378

 Score =  589 bits (297), Expect = e-165
 Identities = 473/532 (88%)
 Strand = Plus / Plus

                                                                        
Query: 33   agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 92
            ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| 
Sbjct: 1141 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 1200

                                                                        
Query: 93   cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 152
            || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| ||||||
Sbjct: 1201 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 1260

                                                                        
Query: 153  aggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataag 212
            | ||| |||||||||||||| |||||||||||  |||| || ||||| |||||||| || 
Sbjct: 1261 aagattcttgaggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaa 1320

                                                                        
Query: 213  gttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggct 272
             ||||| | || || ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 1321 attgcccggagaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggct 1380

                                                                        
Query: 273  gccatccttgccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgatgct 332
            || || ||||| || |||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 1381 gctattcttgctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgct 1440

                                                                        
Query: 333  ctggagaggatcattgctgggcctgagaagaagaatgcagttgtttcagaacagaagagg 392
             ||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||
Sbjct: 1441 ttggagaggatcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagagg 1500

                                                                        
Query: 393  aagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatat 452
            |  ||||||||||||||||||||||| |||||||| || |||||||| ||||||||||||
Sbjct: 1501 agacttgtggcttaccatgaggctggtcatgcccttgttggtgccctcatgcctgaatat 1560

                                                                        
Query: 453  gaccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttcttt 512
            ||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 1561 gaccctgttgctaagatttccatcattcctcgtggtcaagctggtggactcacattcttt 1620

                                                                
Query: 513  gctncaagcgaagagaggctcgagtctggactgtacagcaggagctacctag 564
            ||| ||||||| |||||||| ||||||||| |||||||||||||||||||||
Sbjct: 1621 gctccaagcgaggagaggcttgagtctggattgtacagcaggagctacctag 1672
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>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full
           insert sequence
          Length = 1325

 Score =  583 bits (294), Expect = e-163
 Identities = 473/532 (88%), Gaps = 2/532 (0%)
 Strand = Plus / Plus

                                                                       
Query: 33  agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 92
           ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| 
Sbjct: 199 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 258

                                                                       
Query: 93  cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 152
           || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| ||||||
Sbjct: 259 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 318

                                                                       
Query: 153 aggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataag 212
           | ||| |||||||||||||| |||||||||||  |||| || ||||| |||||||| || 
Sbjct: 319 aagattcttgaggttcactcgagaggaaaggc--tggcaaaagatgtcgactttgagaaa 376

                                                                       
Query: 213 gttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggct 272
            ||||| | || || ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 377 attgcccggagaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggct 436

                                                                       
Query: 273 gccatccttgccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgatgct 332
           || || ||||| || |||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 437 gctattcttgctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgct 496

                                                                       
Query: 333 ctggagaggatcattgctgggcctgagaagaagaatgcagttgtttcagaacagaagagg 392
            ||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||
Sbjct: 497 ttggagaggatcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagagg 556

                                                                       
Query: 393 aagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatat 452
           |  ||||||||||||||||||||||| |||||||| || |||||||| ||||||||||||
Sbjct: 557 agacttgtggcttaccatgaggctggtcatgcccttgttggtgccctcatgcctgaatat 616

                                                                       
Query: 453 gaccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttcttt 512
           ||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 617 gaccctgttgctaagatttccatcattcctcgtggtcaagctggtggactcacattcttt 676

                                                               
Query: 513 gctncaagcgaagagaggctcgagtctggactgtacagcaggagctacctag 564
           ||| ||||||| |||||||| ||||||||| |||||||||||||||||||||
Sbjct: 677 gctccaagcgaggagaggcttgagtctggattgtacagcaggagctacctag 728
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>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA
           sequence
          Length = 890

 Score =  482 bits (243), Expect = e-133
 Identities = 260/266 (97%)
 Strand = Plus / Plus

                                                                       
Query: 299 gaaggagataagcaaggacgagatctctgatgctctggagaggatcattgctgggcctga 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 8   gaaggagataagcaaggacgagatctctgatgctctggagaggatcattgctgggcccga 67

                                                                       
Query: 359 gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 127

                                                                       
Query: 419 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 187

                                                                       
Query: 479 tcctcgaggtcaggctggtggtctcacgttctttgctncaagcgaagagaggctcgagtc 538
           |||||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 188 tcctcgtggtcaagctggtgggctcacgttctttgctccaagcgaagagaggctcgagtc 247

                                     
Query: 539 tggactgtacagcaggagctacctag 564
           ||| ||||||||||||||||||||||
Sbjct: 248 tgggctgtacagcaggagctacctag 273
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>gb|AY103957.1| Zea mays PCO116832 mRNA sequence
          Length = 1820

 Score =  474 bits (239), Expect = e-130
 Identities = 475/554 (85%)
 Strand = Plus / Plus

                                                                        
Query: 6    acggagatggacggcttctccggaaacagcggtgtcatcgtgctcgccgcgaccaacagg 65
            ||||||||||| |||||| | || |||||||||||||| ||||| ||||| |||||||||
Sbjct: 466  acggagatggatggcttcgctggcaacagcggtgtcattgtgcttgccgccaccaacagg 525

                                                                        
Query: 66   ccggatgtgcttgactccgcgcttctgcggccagggcggttcgatcggcaggtcaccgtc 125
            || |||||||| ||||||||||| || || |||||| | || ||| ||||||||||||| 
Sbjct: 526  cccgatgtgctggactccgcgctcctacgaccagggagatttgataggcaggtcaccgtt 585

                                                                        
Query: 126  gaccgtccggatgtagccggccgtgtcaggatccttgaggttcactccagaggaaaggca 185
            ||| | || ||||| ||||| || |||| ||| |||||||| |||||| |||||||||| 
Sbjct: 586  gacaggccagatgttgccggacgcgtcaagattcttgaggtccactcccgaggaaaggct 645

                                                                        
Query: 186  ttggcgaaggatgtggactttgataaggttgccagaaggacacctggtttcaccggtgct 245
            |||||||| ||||| || ||||||||  |||| |||||||| ||||||||||| ||||||
Sbjct: 646  ttggcgaaagatgttgattttgataaaattgctagaaggacccctggtttcactggtgct 705

                                                                        
Query: 246  gatcttcagaacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggag 305
            || || || ||| | ||||||||||||||||||||||| || || |||||||| ||||| 
Sbjct: 706  gacctccaaaacctcatgaatgaggctgccatccttgctgctcgccgtgatcttaaggaa 765

                                                                        
Query: 306  ataagcaaggacgagatctctgatgctctggagaggatcattgctgggcctgagaagaag 365
            || |||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| 
Sbjct: 766  attagcaaggatgagatctctgatgctcttgagagaatcattgctggccctgagaagaaa 825

                                                                        
Query: 366  aatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgcc 425
            ||||| |||||||| ||  |||||| || ||| || ||||||||||||||||| ||||||
Sbjct: 826  aatgctgttgtttccgaggagaagaagaggctcgtcgcttaccatgaggctggccatgcc 885

                                                                        
Query: 426  ctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcga 485
            || ||||| ||||| ||||| || ||||| || || ||||||||||||||||| ||||| 
Sbjct: 886  cttgtcggcgccctcatgccagagtatgatccagtagccaagatttccatcatccctcgt 945

                                                                        
Query: 486  ggtcaggctggtggtctcacgttctttgctncaagcgaagagaggctcgagtctggactg 545
            || ||||||||||| ||||| ||||||||| |||||||||| ||||| || |||||| ||
Sbjct: 946  ggccaggctggtggactcacattctttgctccaagcgaagaaaggctagaatctggattg 1005

                          
Query: 546  tacagcaggagcta 559
            ||||||||||||||
Sbjct: 1006 tacagcaggagcta 1019
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>ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent peptidase/ ATPase/
            metallopeptidase AT1G50250 (FTSH1) mRNA, complete cds
          Length = 2473

 Score =  303 bits (153), Expect = 3e-79
 Identities = 314/368 (85%)
 Strand = Plus / Plus

                                                                        
Query: 195  gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 254
            |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  | || 
Sbjct: 1490 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1549

                                                                        
Query: 255  aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 314
            ||| |||||||||| || || || ||||| ||  | ||||| || ||||| |||||||||
Sbjct: 1550 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1609

                                                                        
Query: 315  gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 374
            || || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 1610 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1669

                                                                        
Query: 375  gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 434
            || || ||| |||||| ||  ||||| || |||||||||||||| ||||| || || |||
Sbjct: 1670 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1729

                                                                        
Query: 435  gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 494
            || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || |||
Sbjct: 1730 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1789

                                                                        
Query: 495  ggtggtctcacgttctttgctncaagcgaagagaggctcgagtctggactgtacagcagg 554
            ||||| ||||| || |||||| |||||||||| || || ||||||||| ||||||| |||
Sbjct: 1790 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1849

                    
Query: 555  agctacct 562
            ||||||||
Sbjct: 1850 agctacct 1857
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>gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250)
            mRNA, complete cds
          Length = 2182

 Score =  303 bits (153), Expect = 3e-79
 Identities = 314/368 (85%)
 Strand = Plus / Plus

                                                                        
Query: 195  gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 254
            |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  | || 
Sbjct: 1357 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1416

                                                                        
Query: 255  aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 314
            ||| |||||||||| || || || ||||| ||  | ||||| || ||||| |||||||||
Sbjct: 1417 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1476

                                                                        
Query: 315  gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 374
            || || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 1477 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1536

                                                                        
Query: 375  gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 434
            || || ||| |||||| ||  ||||| || |||||||||||||| ||||| || || |||
Sbjct: 1537 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1596

                                                                        
Query: 435  gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 494
            || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || |||
Sbjct: 1597 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1656

                                                                        
Query: 495  ggtggtctcacgttctttgctncaagcgaagagaggctcgagtctggactgtacagcagg 554
            ||||| ||||| || |||||| |||||||||| || || ||||||||| ||||||| |||
Sbjct: 1657 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1716

                    
Query: 555  agctacct 562
            ||||||||
Sbjct: 1717 agctacct 1724
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>gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250)
            mRNA, complete cds
          Length = 2452

 Score =  303 bits (153), Expect = 3e-79
 Identities = 314/368 (85%)
 Strand = Plus / Plus

                                                                        
Query: 195  gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 254
            |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  | || 
Sbjct: 1453 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1512

                                                                        
Query: 255  aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 314
            ||| |||||||||| || || || ||||| ||  | ||||| || ||||| |||||||||
Sbjct: 1513 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1572

                                                                        
Query: 315  gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 374
            || || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 1573 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1632

                                                                        
Query: 375  gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 434
            || || ||| |||||| ||  ||||| || |||||||||||||| ||||| || || |||
Sbjct: 1633 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1692

                                                                        
Query: 435  gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 494
            || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || |||
Sbjct: 1693 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1752

                                                                        
Query: 495  ggtggtctcacgttctttgctncaagcgaagagaggctcgagtctggactgtacagcagg 554
            ||||| ||||| || |||||| |||||||||| || || ||||||||| ||||||| |||
Sbjct: 1753 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1812

                    
Query: 555  agctacct 562
            ||||||||
Sbjct: 1813 agctacct 1820
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>emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease
          Length = 2447

 Score =  295 bits (149), Expect = 8e-77
 Identities = 313/368 (85%)
 Strand = Plus / Plus

                                                                        
Query: 195  gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 254
            |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  | || 
Sbjct: 1488 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1547

                                                                        
Query: 255  aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 314
            ||| |||||||||| || || || ||||| ||  | |||||  | ||||| |||||||||
Sbjct: 1548 aacctgatgaatgaagcggcgattcttgcggctaggcgtgacgttaaggaaataagcaag 1607

                                                                        
Query: 315  gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 374
            || || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 1608 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1667

                                                                        
Query: 375  gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 434
            || || ||| |||||| ||  ||||| || |||||||||||||| ||||| || || |||
Sbjct: 1668 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1727

                                                                        
Query: 435  gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 494
            || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || |||
Sbjct: 1728 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1787

                                                                        
Query: 495  ggtggtctcacgttctttgctncaagcgaagagaggctcgagtctggactgtacagcagg 554
            ||||| ||||| || |||||| |||||||||| || || ||||||||| ||||||| |||
Sbjct: 1788 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1847

                    
Query: 555  agctacct 562
            ||||||||
Sbjct: 1848 agctacct 1855
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>emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS28ZC04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2428

 Score =  295 bits (149), Expect = 8e-77
 Identities = 313/368 (85%)
 Strand = Plus / Plus

                                                                        
Query: 195  gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 254
            |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  | || 
Sbjct: 1489 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1548

                                                                        
Query: 255  aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 314
            ||| |||||||||| || || || ||||| ||  | ||||| || ||||| |||||||||
Sbjct: 1549 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1608

                                                                        
Query: 315  gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 374
            || || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 1609 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1668

                                                                        
Query: 375  gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 434
            || || ||| |||||| ||  ||||| ||  ||||||||||||| ||||| || || |||
Sbjct: 1669 gtctctgaagagaagaagagacttgttgcacaccatgaggctggtcatgctctagtgggt 1728

                                                                        
Query: 435  gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 494
            || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || |||
Sbjct: 1729 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1788

                                                                        
Query: 495  ggtggtctcacgttctttgctncaagcgaagagaggctcgagtctggactgtacagcagg 554
            ||||| ||||| || |||||| |||||||||| || || ||||||||| ||||||| |||
Sbjct: 1789 ggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtagg 1848

                    
Query: 555  agctacct 562
            ||||||||
Sbjct: 1849 agctacct 1856
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  272 bits (137), Expect = 1e-69
 Identities = 221/249 (88%)
 Strand = Plus / Minus

                                                                            
Query: 163      aggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggttgccagaa 222
                |||||||||| |||||||||||  |||| || ||||| |||||||| ||  ||||| | |
Sbjct: 30360113 aggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaaattgcccgga 30360054

                                                                            
Query: 223      ggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttg 282
                | || ||||||||||| || ||||||||||| |||||||||||||||||||| || ||||
Sbjct: 30360053 gaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggctgctattcttg 30359994

                                                                            
Query: 283      ccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgatgctctggagagga 342
                | || |||||||||||||||||||| |||||||| ||||||||||||||| |||||||||
Sbjct: 30359993 ctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgctttggagagga 30359934

                                                                            
Query: 343      tcattgctgggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtgg 402
                |||||||||||||||||||||| ||||| |||||||||||| |||||||||  |||||||
Sbjct: 30359933 tcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagaggagacttgtgg 30359874

                         
Query: 403      cttaccatg 411
                |||||||||
Sbjct: 30359873 cttaccatg 30359865



 Score =  204 bits (103), Expect = 2e-49
 Identities = 141/154 (91%)
 Strand = Plus / Minus

                                                                            
Query: 411      gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 470
                |||||||| |||||||| || |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 30359771 gaggctggtcatgcccttgttggtgccctcatgcctgaatatgaccctgttgctaagatt 30359712

                                                                            
Query: 471      tccatcattcctcgaggtcaggctggtggtctcacgttctttgctncaagcgaagagagg 530
                |||||||||||||| ||||| |||||||| ||||| ||||||||| ||||||| ||||||
Sbjct: 30359711 tccatcattcctcgtggtcaagctggtggactcacattctttgctccaagcgaggagagg 30359652

                                                  
Query: 531      ctcgagtctggactgtacagcaggagctacctag 564
                || ||||||||| |||||||||||||||||||||
Sbjct: 30359651 cttgagtctggattgtacagcaggagctacctag 30359618



 Score =  123 bits (62), Expect = 7e-25
 Identities = 116/134 (86%)
 Strand = Plus / Minus

                                                                            
Query: 33       agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 92
                ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| 
Sbjct: 30360948 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 30360889

                                                                            
Query: 93       cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 152
                || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| ||||||
Sbjct: 30360888 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 30360829

                              
Query: 153      aggatccttgaggt 166
                | ||| ||||||||
Sbjct: 30360828 aagattcttgaggt 30360815
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>gb|DQ339462.1| Vitis pseudoreticulata ATPase mRNA, complete cds
          Length = 600

 Score =  272 bits (137), Expect = 1e-69
 Identities = 331/396 (83%)
 Strand = Plus / Plus

                                                                       
Query: 155 gatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggt 214
           ||||||| |||| ||||| ||||| |||||| | || |||||||| |||||||| ||| |
Sbjct: 144 gatccttcaggtgcactcaagagggaaggcactagccaaggatgtagactttgaaaagat 203

                                                                       
Query: 215 tgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgc 274
           ||| |||||||| || || ||||| || |||||  | |||||| ||||||||||||| ||
Sbjct: 204 tgcgagaaggaccccaggcttcacaggggctgacttgcagaacctgatgaatgaggcagc 263

                                                                       
Query: 275 catccttgccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgatgctct 334
           |||||| || ||  | ||||| || ||||||||||||||||| ||||| |||||||| ||
Sbjct: 264 catcctcgcagctaggcgtgacctcaaggagataagcaaggatgagatatctgatgccct 323

                                                                       
Query: 335 ggagaggatcattgctgggcctgagaagaagaatgcagttgtttcagaacagaagaggaa 394
           ||||||||| ||||||||||| |||||||| ||||| || || |||||  |||||| |||
Sbjct: 324 ggagaggataattgctgggccagagaagaaaaatgctgtggtctcagacgagaagaagaa 383

                                                                       
Query: 395 gcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatga 454
             | || || || ||||||||||| |||||  | |||||||| || ||||||||||||||
Sbjct: 384 attagttgcctatcatgaggctgggcatgcattggtcggtgcacttatgcctgaatatga 443

                                                                       
Query: 455 ccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttctttgc 514
           |||||| |||||||| ||||||||||| || || || || |||||||| || || |||||
Sbjct: 444 ccctgtggccaagatatccatcattccccgtggccaagcaggtggtcttaccttttttgc 503

                                               
Query: 515 tncaagcgaagagaggctcgagtctggactgtacag 550
           | |||| |||||||| ||||||||||||||||||||
Sbjct: 504 tccaagtgaagagagactcgagtctggactgtacag 539
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>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548E04
          Length = 138037

 Score =  272 bits (137), Expect = 1e-69
 Identities = 221/249 (88%)
 Strand = Plus / Minus

                                                                          
Query: 163    aggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggttgccagaa 222
              |||||||||| |||||||||||  |||| || ||||| |||||||| ||  ||||| | |
Sbjct: 106708 aggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaaattgcccgga 106649

                                                                          
Query: 223    ggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttg 282
              | || ||||||||||| || ||||||||||| |||||||||||||||||||| || ||||
Sbjct: 106648 gaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggctgctattcttg 106589

                                                                          
Query: 283    ccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgatgctctggagagga 342
              | || |||||||||||||||||||| |||||||| ||||||||||||||| |||||||||
Sbjct: 106588 ctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgctttggagagga 106529

                                                                          
Query: 343    tcattgctgggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtgg 402
              |||||||||||||||||||||| ||||| |||||||||||| |||||||||  |||||||
Sbjct: 106528 tcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagaggagacttgtgg 106469

                       
Query: 403    cttaccatg 411
              |||||||||
Sbjct: 106468 cttaccatg 106460



 Score =  204 bits (103), Expect = 2e-49
 Identities = 141/154 (91%)
 Strand = Plus / Minus

                                                                          
Query: 411    gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 470
              |||||||| |||||||| || |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 106366 gaggctggtcatgcccttgttggtgccctcatgcctgaatatgaccctgttgctaagatt 106307

                                                                          
Query: 471    tccatcattcctcgaggtcaggctggtggtctcacgttctttgctncaagcgaagagagg 530
              |||||||||||||| ||||| |||||||| ||||| ||||||||| ||||||| ||||||
Sbjct: 106306 tccatcattcctcgtggtcaagctggtggactcacattctttgctccaagcgaggagagg 106247

                                                
Query: 531    ctcgagtctggactgtacagcaggagctacctag 564
              || ||||||||| |||||||||||||||||||||
Sbjct: 106246 cttgagtctggattgtacagcaggagctacctag 106213



 Score =  123 bits (62), Expect = 7e-25
 Identities = 116/134 (86%)
 Strand = Plus / Minus

                                                                          
Query: 33     agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 92
              ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| 
Sbjct: 107543 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 107484

                                                                          
Query: 93     cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 152
              || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| ||||||
Sbjct: 107483 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 107424

                            
Query: 153    aggatccttgaggt 166
              | ||| ||||||||
Sbjct: 107423 aagattcttgaggt 107410
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>emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein
          Length = 1989

 Score =  262 bits (132), Expect = 1e-66
 Identities = 344/415 (82%)
 Strand = Plus / Plus

                                                                        
Query: 150  gtcaggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgat 209
            |||||||| ||| |||| || || |||||||||||  | || ||||||||||||||||||
Sbjct: 1218 gtcaggattcttcaggtacattctagaggaaaggcccttgcaaaggatgtggactttgat 1277

                                                                        
Query: 210  aaggttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgag 269
            ||| ||||||| || || || |||||||| ||||| ||| | || ||||||||||| || 
Sbjct: 1278 aagattgccaggagaactccaggtttcactggtgcagatttacaaaacttgatgaacgaa 1337

                                                                        
Query: 270  gctgccatccttgccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgat 329
            || ||||||||||| ||  | ||||| || ||||| ||||| || || ||||| ||||||
Sbjct: 1338 gcagccatccttgcagctaggcgtgacctaaaggaaataagtaaagatgagatatctgat 1397

                                                                        
Query: 330  gctctggagaggatcattgctgggcctgagaagaagaatgcagttgtttcagaacagaag 389
            |||||||||||||| |||||||| || |||||||| || || ||||| |||||  |||||
Sbjct: 1398 gctctggagaggataattgctggtccggagaagaaaaacgctgttgtctcagatgagaag 1457

                                                                        
Query: 390  aggaagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaa 449
            | |||||| || ||||| ||||||||||| |||||| | || ||||| || ||||| || 
Sbjct: 1458 aagaagctggtagcttatcatgaggctggccatgccttggttggtgcacttatgcccgag 1517

                                                                        
Query: 450  tatgaccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttc 509
            ||||| |||||||||||||| || || |||||||| || || || ||||||||||| |||
Sbjct: 1518 tatgatcctgttgccaagatatctataattcctcgtggccaagccggtggtctcaccttc 1577

                                                                   
Query: 510  tttgctncaagcgaagagaggctcgagtctggactgtacagcaggagctacctag 564
            |||||  | |||||||| || || ||||| || ||||||||||||||||||||||
Sbjct: 1578 tttgcccccagcgaagaaagacttgagtcaggcctgtacagcaggagctacctag 1632
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>emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial
          Length = 2190

 Score =  258 bits (130), Expect = 2e-65
 Identities = 311/369 (84%), Gaps = 2/369 (0%)
 Strand = Plus / Plus

                                                                        
Query: 195  gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 254
            |||||||||||||| ||||||||||||||| | ||||||||||| ||||||||  | || 
Sbjct: 1153 gatgtggactttgacaaggttgccagaaggtcccctggtttcacgggtgctgacttacaa 1212

                                                                        
Query: 255  aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 314
            ||| |||||||||| || || || ||||| ||  | ||||| || ||||| |||||||||
Sbjct: 1213 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1272

                                                                        
Query: 315  gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 374
            || || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 1273 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1332

                                                                        
Query: 375  gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccct-cgtcgg 433
            || || ||| |||||| ||  ||||| || |||||||||||||| ||||| ||  || ||
Sbjct: 1333 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctaggtggg 1392

                                                                        
Query: 434  tgccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggc 493
            ||| || || || |||||| | || ||||| |||||||| ||||||||||| || || ||
Sbjct: 1393 tgctcttat-ccagaatataatccggttgcaaagatttctatcattcctcgtggccaagc 1451

                                                                        
Query: 494  tggtggtctcacgttctttgctncaagcgaagagaggctcgagtctggactgtacagcag 553
            |||||| ||||| || |||||| |||||||||| || || ||||||||| ||||||| ||
Sbjct: 1452 tggtgggctcactttttttgctccaagcgaagaaagacttgagtctggattgtacagtag 1511

                     
Query: 554  gagctacct 562
            |||||||||
Sbjct: 1512 gagctacct 1520
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>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds
          Length = 2447

 Score =  226 bits (114), Expect = 6e-56
 Identities = 308/373 (82%)
 Strand = Plus / Plus

                                                                        
Query: 192  aaggatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatctt 251
            ||||||||||||||||| ||| ||||||| || ||||| |||| ||| ||||| ||| | 
Sbjct: 1348 aaggatgtggactttgagaagattgccaggagaacaccgggttacactggtgcagatttg 1407

                                                                        
Query: 252  cagaacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagc 311
            || ||||||||||| || || || |||||||| ||  | ||||| || ||||| ||||| 
Sbjct: 1408 caaaacttgatgaacgaagcagcaatccttgcagctaggcgtgaactaaaggaaataagt 1467

                                                                        
Query: 312  aaggacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgca 371
            || || ||||| |||||||||||||||||||| ||||| || || |||||||| ||||| 
Sbjct: 1468 aaagatgagatatctgatgctctggagaggataattgccggcccagagaagaaaaatgct 1527

                                                                        
Query: 372  gttgtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtc 431
            ||||| |||||  |||||| |||||| || ||||| |||||||| || |||||| | || 
Sbjct: 1528 gttgtctcagatgagaagaagaagctggtagcttatcatgaggccggccatgccttggtt 1587

                                                                        
Query: 432  ggtgccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcag 491
            ||||| || ||||| || ||||| |||||||||||||| || || ||||||||||| || 
Sbjct: 1588 ggtgcacttatgcccgagtatgatcctgttgccaagatatctataattcctcgaggccaa 1647

                                                                        
Query: 492  gctggtggtctcacgttctttgctncaagcgaagagaggctcgagtctggactgtacagc 551
            ||||||||||| || ||||||||  | |||||||| || || ||||| ||  ||||||||
Sbjct: 1648 gctggtggtcttaccttctttgcccccagcgaagaaagacttgagtcgggcttgtacagc 1707

                         
Query: 552  aggagctacctag 564
            |||||||||||||
Sbjct: 1708 aggagctacctag 1720
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>ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-dependent peptidase/
            ATPase/ metallopeptidase AT5G42270 (VAR1) mRNA, complete
            cds
          Length = 3058

 Score =  184 bits (93), Expect = 2e-43
 Identities = 272/332 (81%)
 Strand = Plus / Plus

                                                                        
Query: 231  ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgcccgt 290
            |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| ||  | 
Sbjct: 1530 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 1589

                                                                        
Query: 291  cgtgatctgaaggagataagcaaggacgagatctctgatgctctggagaggatcattgct 350
            ||||| || ||||||||||||||||| || || ||||||||||| |||||||||||||||
Sbjct: 1590 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 1649

                                                                        
Query: 351  gggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccat 410
            || ||||| |||||||| || ||||| || ||  ||||||  |  ||||| |||||||||
Sbjct: 1650 ggacctgaaaagaagaacgctgttgtctctgaggagaagaaaagacttgttgcttaccat 1709

                                                                        
Query: 411  gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 470
            |||||||| |||||  | || ||||| || ||||| || ||||| || || |||||||| 
Sbjct: 1710 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagata 1769

                                                                        
Query: 471  tccatcattcctcgaggtcaggctggtggtctcacgttctttgctncaagcgaagagagg 530
            || || ||||| || || || |||||||| ||||| || || ||| | ||||||||||||
Sbjct: 1770 tcgattattccacgtggccaagctggtgggctcacctttttcgctcctagcgaagagagg 1829

                                            
Query: 531  ctcgagtctggactgtacagcaggagctacct 562
            || ||||| ||| |||| ||||| ||||||||
Sbjct: 1830 ctagagtccggattgtatagcagaagctacct 1861
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>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete
             sequence
          Length = 100975

 Score =  184 bits (93), Expect = 2e-43
 Identities = 186/217 (85%)
 Strand = Plus / Plus

                                                                         
Query: 195   gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 254
             |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  | || 
Sbjct: 61377 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 61436

                                                                         
Query: 255   aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 314
             ||| |||||||||| || || || ||||| ||  | ||||| || ||||| |||||||||
Sbjct: 61437 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 61496

                                                                         
Query: 315   gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 374
             || || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 61497 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 61556

                                                  
Query: 375   gtttcagaacagaagaggaagcttgtggcttaccatg 411
             || || ||| |||||| ||  ||||| || |||||||
Sbjct: 61557 gtctctgaagagaagaagagacttgttgcataccatg 61593



 Score =  121 bits (61), Expect = 3e-24
 Identities = 129/152 (84%)
 Strand = Plus / Plus

                                                                         
Query: 411   gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 470
             |||||||| ||||| || || ||||| || ||||| |||||||| || ||||| ||||||
Sbjct: 61680 gaggctggtcatgctctagtgggtgctcttatgccagaatatgatccggttgcaaagatt 61739

                                                                         
Query: 471   tccatcattcctcgaggtcaggctggtggtctcacgttctttgctncaagcgaagagagg 530
             || ||||||||||| || || |||||||| ||||| || |||||| |||||||||| || 
Sbjct: 61740 tctatcattcctcgtggccaagctggtgggctcactttttttgctccaagcgaagaaaga 61799

                                             
Query: 531   ctcgagtctggactgtacagcaggagctacct 562
             || ||||||||| ||||||| |||||||||||
Sbjct: 61800 cttgagtctggattgtacagtaggagctacct 61831
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>gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, complete cds
          Length = 2311

 Score =  184 bits (93), Expect = 2e-43
 Identities = 272/332 (81%)
 Strand = Plus / Plus

                                                                        
Query: 231  ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgcccgt 290
            |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| ||  | 
Sbjct: 1456 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 1515

                                                                        
Query: 291  cgtgatctgaaggagataagcaaggacgagatctctgatgctctggagaggatcattgct 350
            ||||| || ||||||||||||||||| || || ||||||||||| |||||||||||||||
Sbjct: 1516 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 1575

                                                                        
Query: 351  gggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccat 410
            || ||||| |||||||| || ||||| || ||  ||||||  |  ||||| |||||||||
Sbjct: 1576 ggacctgaaaagaagaacgctgttgtctctgaggagaagaaaagacttgttgcttaccat 1635

                                                                        
Query: 411  gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 470
            |||||||| |||||  | || ||||| || ||||| || ||||| || || |||||||| 
Sbjct: 1636 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagata 1695

                                                                        
Query: 471  tccatcattcctcgaggtcaggctggtggtctcacgttctttgctncaagcgaagagagg 530
            || || ||||| || || || |||||||| ||||| || || ||| | ||||||||||||
Sbjct: 1696 tcgattattccacgtggccaagctggtgggctcacctttttcgctcctagcgaagagagg 1755

                                            
Query: 531  ctcgagtctggactgtacagcaggagctacct 562
            || ||||| ||| |||| ||||| ||||||||
Sbjct: 1756 ctagagtccggattgtatagcagaagctacct 1787
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>gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, complete cds; chloroplast
            gene for chloroplast product
          Length = 2352

 Score =  170 bits (86), Expect = 3e-39
 Identities = 325/405 (80%)
 Strand = Plus / Plus

                                                                        
Query: 156  atccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggtt 215
            |||||| |||| || || |||||||| ||| | || |||||||| |||||||| ||  ||
Sbjct: 1343 atccttcaggtgcattctagaggaaaagcacttgcaaaggatgttgactttgacaaaatt 1402

                                                                        
Query: 216  gccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgcc 275
            ||||| || || || || ||||| || | |||||| |||||  ||||||| || || || 
Sbjct: 1403 gccaggagaaccccagggttcacaggagttgatctgcagaatctgatgaacgaagcagct 1462

                                                                        
Query: 276  atccttgccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgatgctctg 335
            || ||||| ||| | ||||| || || || ||||| || || |||||  ||||||| || 
Sbjct: 1463 attcttgctgccaggcgtgacctcaaagaaataagtaaagatgagatagctgatgcgctt 1522

                                                                        
Query: 336  gagaggatcattgctgggcctgagaagaagaatgcagttgtttcagaacagaagaggaag 395
            || |||||||||||||| || || ||||| ||||| ||||| |||||| |||||| ||| 
Sbjct: 1523 gaaaggatcattgctggaccagaaaagaaaaatgccgttgtctcagaagagaagaagaaa 1582

                                                                        
Query: 396  cttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgac 455
             | || || || ||||||||||| |||||  | || |||||  |||||||||||||||||
Sbjct: 1583 ttagtagcctatcatgaggctggccatgctttagtgggtgctttgatgcctgaatatgac 1642

                                                                        
Query: 456  cctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttctttgct 515
            ||||| |||||||| || || || ||||| || || |||||||||||||| || ||||||
Sbjct: 1643 cctgtagccaagatatctattatacctcgtggccaagctggtggtctcaccttttttgct 1702

                                                         
Query: 516  ncaagcgaagagaggctcgagtctggactgtacagcaggagctac 560
             | |||||||||||||| ||||||||| ||||||| || ||||||
Sbjct: 1703 cctagcgaagagaggcttgagtctggattgtacagtagaagctac 1747
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>dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14
          Length = 59762

 Score =  123 bits (62), Expect = 7e-25
 Identities = 125/146 (85%)
 Strand = Plus / Plus

                                                                         
Query: 231   ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgcccgt 290
             |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| ||  | 
Sbjct: 42638 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 42697

                                                                         
Query: 291   cgtgatctgaaggagataagcaaggacgagatctctgatgctctggagaggatcattgct 350
             ||||| || ||||||||||||||||| || || ||||||||||| |||||||||||||||
Sbjct: 42698 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 42757

                                       
Query: 351   gggcctgagaagaagaatgcagttgt 376
             || ||||| |||||||| || |||||
Sbjct: 42758 ggacctgaaaagaagaacgctgttgt 42783



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 122/152 (80%)
 Strand = Plus / Plus

                                                                         
Query: 411   gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 470
             |||||||| |||||  | || ||||| || ||||| || ||||| || || |||||||| 
Sbjct: 42899 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagata 42958

                                                                         
Query: 471   tccatcattcctcgaggtcaggctggtggtctcacgttctttgctncaagcgaagagagg 530
             || || ||||| || || || |||||||| ||||| || || ||| | ||||||||||||
Sbjct: 42959 tcgattattccacgtggccaagctggtgggctcacctttttcgctcctagcgaagagagg 43018

                                             
Query: 531   ctcgagtctggactgtacagcaggagctacct 562
             || ||||| ||| |||| ||||| ||||||||
Sbjct: 43019 ctagagtccggattgtatagcagaagctacct 43050
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 95/113 (84%)
 Strand = Plus / Minus

                                                                           
Query: 399     gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccct 458
               |||||||| || ||||| || ||||||||||||||||| ||||||||||| || ||||| 
Sbjct: 1951862 gtggcttatcacgaggcaggccatgccctcgtcggtgctctgatgcctgattacgacccc 1951803

                                                                    
Query: 459     gttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttctt 511
               |||   |||||||| ||||||||||| ||  | || || ||||||||||||||
Sbjct: 1951802 gttcaaaagatttcgatcattcctcgcggcaatgccggcggtctcacgttctt 1951750
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>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7
          Length = 348071

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                             
Query: 465    aagatttccatcattcctcgaggtcaggctggtggtctcacgttctt 511
              |||||||||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 154926 aagatttccatcattcctcgtggtcaggcgggtggtctcacattctt 154880
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                          
Query: 411    gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 470
              |||||||| |||||||| || ||||||||||||||||| || ||||| |||   ||||| 
Sbjct: 305543 gaggctggccatgcccttgtgggtgccctgatgcctgactacgacccagttcagaagatc 305602

                         
Query: 471    tccatcattcc 481
              |||||||||||
Sbjct: 305603 tccatcattcc 305613
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>gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full insert mRNA
           sequence
          Length = 654

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 533 cgagtctggactgtacagcaggagctacctag 564
           |||||||||||| |||||||||||||||||||
Sbjct: 1   cgagtctggactatacagcaggagctacctag 32
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>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7
          Length = 348764

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                          
Query: 237    accggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgcccgtcgtgat 296
              ||||||||||||||    ||| || ||||||||||||||||||| || |||||||| || 
Sbjct: 303834 accggtgctgatctggccaacctgctgaatgaggctgccatcctggctgcccgtcgcgaa 303893

                                         
Query: 297    ctgaaggagataagcaaggacgagatc 323
              ||||  ||| | ||||| |||||||||
Sbjct: 303894 ctgaccgaggtcagcaacgacgagatc 303920
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                           
Query: 40      tcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccag 99
               |||||||| |||||||||||||| | || || ||||| ||  ||||||| |||||||| |
Sbjct: 1984109 tcatcgtgatcgccgcgaccaaccgccccgacgtgctcgatcccgcgctgctgcggccgg 1984050

                         
Query: 100     ggcggttcga 109
               | ||||||||
Sbjct: 1984049 gccggttcga 1984040
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>gb|AE009302.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 72 of
            187 of the complete sequence
          Length = 10906

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 49   tcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcg 108
            ||||||| |||||| | || ||||| |||||| ||||||||||||| || || || ||||
Sbjct: 2702 tcgccgctaccaaccgtcctgatgttcttgaccccgcgcttctgcgtcccggccgtttcg 2643

                       
Query: 109  atcggcaggtc 119
            | || ||||||
Sbjct: 2642 accgtcaggtc 2632
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>gb|AE008312.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 116 of
            187 of the complete sequence
          Length = 11049

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                        
Query: 49   tcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcg 108
            ||||||| |||||| | || ||||| |||||| ||||||||||||| || || || ||||
Sbjct: 4241 tcgccgctaccaaccgtcctgatgttcttgaccccgcgcttctgcgtcccggccgtttcg 4300

                       
Query: 109  atcggcaggtc 119
            | || ||||||
Sbjct: 4301 accgtcaggtc 4311
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>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 1       tgctcacggagatggacggcttc 23
               |||||||||||||||||||||||
Sbjct: 1210293 tgctcacggagatggacggcttc 1210271
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>ref|XM_782306.1| PREDICTED: Strongylocentrotus purpuratus similar to YME1-like 1
           isoform 1 (LOC582354), mRNA
          Length = 2071

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 214 ttgccagaaggacacctggtttcaccggtgctgatcttcagaa 256
           |||||||| |||||  ||||||||| || ||||||||||||||
Sbjct: 620 ttgccagagggacagttggtttcacaggggctgatcttcagaa 662
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>emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; segment 3/5
          Length = 348178

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 214  ttgccagaaggacacctggtttcaccggtgctgat 248
            |||| ||||||||||||||||| ||||| ||||||
Sbjct: 5936 ttgcaagaaggacacctggttttaccggagctgat 5902
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>emb|AJ488199.1|PVI488199 Uncultured bacterium gene for putative zinc metallopeptidase, clone
           8
          Length = 1884

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 1   tgctcacggagatggacggcttc 23
           |||||||||||||||||||||||
Sbjct: 851 tgctcacggagatggacggcttc 873
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                          
Query: 399     gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccc 457
               ||||||||||| || ||||| || ||| | ||||||||| |||||||||| || |||||
Sbjct: 1324762 gtggcttaccacgaagctggtcacgccttggtcggtgccttgatgcctgactacgaccc 1324704
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                         
Query: 399    gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccc 457
              ||||||||||| || ||||| || ||| | ||||||||| |||||||||| || |||||
Sbjct: 296120 gtggcttaccacgaagctggtcacgccttggtcggtgccttgatgcctgactacgaccc 296178
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>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5
          Length = 349742

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                    
Query: 195    gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgat 248
              ||||| ||| ||||||||||||| ||||| || ||||| || || |||||||||
Sbjct: 220557 gatgtagaccttgataaggttgcgagaagaactcctgggtttacaggtgctgat 220504
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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 3      ctcacggagatggacggcttctccgg 28
              ||||| ||||||||||||||||||||
Sbjct: 112040 ctcaccgagatggacggcttctccgg 112065
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1    tgctcacggagatggacggctt 22
            ||||||||||||||||||||||
Sbjct: 4405 tgctcacggagatggacggctt 4384
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>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence
          Length = 98713

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 395   gcttgtggcttaccatgaggc 415
             |||||||||||||||||||||
Sbjct: 55731 gcttgtggcttaccatgaggc 55711
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 46     tgctcgccgcgaccaacaggc 66
              |||||||||||||||||||||
Sbjct: 145980 tgctcgccgcgaccaacaggc 146000
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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 405    taccatgaggctggacatgccctcgtcggtgccctgatgcc 445
              ||||||||||| || |||||||| || || |||||||||||
Sbjct: 111477 taccatgaggcgggtcatgcccttgtgggcgccctgatgcc 111437
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 51      gccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcgat 110
               |||||||||||| |||| || ||||| ||| | ||| | || ||||| ||||||||||| 
Sbjct: 2726406 gccgcgaccaaccggcctgacgtgctggaccctgcggtcctccggccggggcggttcgac 2726347

                    
Query: 111     cggca 115
               |||||
Sbjct: 2726346 cggca 2726342
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>ref|NM_115254.3| Arabidopsis thaliana binding / transporter AT3G53940 mRNA, complete
            cds
          Length = 1542

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 356  tgagaagaagaatgcagttg 375
            ||||||||||||||||||||
Sbjct: 1089 tgagaagaagaatgcagttg 1108
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>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 69   gatgtgcttgactccgcgcttctgcggccagggcggttcgatcg 112
            ||||||||||| || |||||| |||| |||||||| || |||||
Sbjct: 9289 gatgtgcttgattcggcgcttttgcgtccagggcgttttgatcg 9332
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>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 395    gcttgtggcttaccatgaggctggacatgccctcgtcggt 434
              |||||| |||||||||||||| || |||||| | ||||||
Sbjct: 181273 gcttgtagcttaccatgaggcgggccatgccatggtcggt 181312
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 393    aagcttgtggcttaccatga 412
              ||||||||||||||||||||
Sbjct: 301864 aagcttgtggcttaccatga 301883
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>gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome 14, complete sequence
          Length = 210969

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 535   agtctggactgtacagcaggagct 558
             |||||| |||||||||||||||||
Sbjct: 68432 agtctgcactgtacagcaggagct 68409
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>gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, complete sequence
          Length = 225556

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   ttgaggttcactccagagga 179
             ||||||||||||||||||||
Sbjct: 84075 ttgaggttcactccagagga 84094
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>gb|BT011963.1| Arabidopsis thaliana At3g53940 mRNA sequence
          Length = 1095

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 356 tgagaagaagaatgcagttg 375
           ||||||||||||||||||||
Sbjct: 881 tgagaagaagaatgcagttg 900
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>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12
          Length = 306250

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   atgaggctggacatgccctc 428
             ||||||||||||||||||||
Sbjct: 54117 atgaggctggacatgccctc 54136
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>ref|XM_499951.1| Yarrowia lipolytica CLIB122, YALI0A10615g predicted mRNA
          Length = 2403

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 398  tgtggcttaccatgaggctggacatgcc 425
            |||||| |||||||||||||| ||||||
Sbjct: 1773 tgtggcctaccatgaggctggccatgcc 1800
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>gb|AF259761.1| Ovis aries microsatellite MNS-89 sequence
          Length = 995

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 434 tgccctgatgcctgaatatg 453
           ||||||||||||||||||||
Sbjct: 798 tgccctgatgcctgaatatg 817
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>gb|AE008912.1| Salmonella typhimurium LT2, section 216 of 220 of the complete genome
          Length = 20216

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 435  gccctgatgcctgaatatga 454
            ||||||||||||||||||||
Sbjct: 4815 gccctgatgcctgaatatga 4796
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>emb|AL627284.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
            complete chromosome; segment 20/20
          Length = 88037

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 435  gccctgatgcctgaatatga 454
            ||||||||||||||||||||
Sbjct: 3877 gccctgatgcctgaatatga 3858
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>emb|AL132960.2|ATF5K20 Arabidopsis thaliana DNA chromosome 3, BAC clone F5K20
          Length = 119407

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   tgagaagaagaatgcagttg 375
             ||||||||||||||||||||
Sbjct: 73981 tgagaagaagaatgcagttg 73962
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>gb|AF236051.1| California sea lion herpesvirus terminase gene, partial cds
          Length = 448

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 386 gaagaggaagcttgtggctt 405
           ||||||||||||||||||||
Sbjct: 109 gaagaggaagcttgtggctt 90
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                           
Query: 75      cttgactccgcgcttctgcggccagggcggttcgatcggcaggt 118
               |||||||||||| | |||||||| || || ||||| ||||||||
Sbjct: 2168295 cttgactccgcgttgctgcggccgggccgcttcgaccggcaggt 2168338
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>gb|AY093262.1| Arabidopsis thaliana putative protein (F5K20.24) mRNA, complete cds
          Length = 1169

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 356 tgagaagaagaatgcagttg 375
           ||||||||||||||||||||
Sbjct: 884 tgagaagaagaatgcagttg 903
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>gb|AY062478.1| Arabidopsis thaliana putative protein (F5K20.24) mRNA, complete cds
          Length = 1397

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 356  tgagaagaagaatgcagttg 375
            ||||||||||||||||||||
Sbjct: 1089 tgagaagaagaatgcagttg 1108
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>gb|AF193618.1|AF193618 California sea lion herpesvirus terminase gene, partial cds
          Length = 375

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 386 gaagaggaagcttgtggctt 405
           ||||||||||||||||||||
Sbjct: 36  gaagaggaagcttgtggctt 17
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>emb|BX822250.1|CNS0A70P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB23ZB02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1400

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 356  tgagaagaagaatgcagttg 375
            ||||||||||||||||||||
Sbjct: 1044 tgagaagaagaatgcagttg 1063
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>emb|BX824565.1|CNS0A4VO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH56ZE10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1499

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 356  tgagaagaagaatgcagttg 375
            ||||||||||||||||||||
Sbjct: 1056 tgagaagaagaatgcagttg 1075
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>gb|AC068279.6| Homo sapiens BAC clone RP11-153P14 from 2, complete sequence
          Length = 135351

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 458  tgttgccaagatttccatca 477
            ||||||||||||||||||||
Sbjct: 6697 tgttgccaagatttccatca 6678
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>gb|AE004548.1| Pseudomonas aeruginosa PAO1, section 109 of 529 of the complete
            genome
          Length = 10054

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   tcatcgtgctcgccgcgacc 59
            ||||||||||||||||||||
Sbjct: 8703 tcatcgtgctcgccgcgacc 8722
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     tggcgaaggatgtggacttt 206
               ||||||||||||||||||||
Sbjct: 1272758 tggcgaaggatgtggacttt 1272777
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>ref|XM_345541.2| PREDICTED: Rattus norvegicus similar to Ubiquitin carboxyl-terminal
           hydrolase isozyme L3 (UCH-L3) (Ubiquitin thiolesterase
           L3) (LOC366382), mRNA
          Length = 687

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 377 ttcagaacagaagaggaagc 396
           ||||||||||||||||||||
Sbjct: 199 ttcagaacagaagaggaagc 218
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>gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complete sequence
          Length = 205662

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 458    tgttgccaagatttccatca 477
              ||||||||||||||||||||
Sbjct: 109069 tgttgccaagatttccatca 109088
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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 91     tgcggccagggcggttcgatcggcaggt 118
              |||||||||| ||||||||||| |||||
Sbjct: 697074 tgcggccaggacggttcgatcgccaggt 697101



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                      
Query: 399    gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatga 454
              |||||||||||||| ||||| || ||| | || |||||  |||||||||| |||||
Sbjct: 472337 gtggcttaccatgaagctggccacgccttggtgggtgctttgatgcctgattatga 472392
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    gcgcttctgcggccagggcg 103
             ||||||||||||||||||||
Sbjct: 94710 gcgcttctgcggccagggcg 94729
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 435     gccctgatgcctgaatatga 454
               ||||||||||||||||||||
Sbjct: 4707801 gccctgatgcctgaatatga 4707782
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 435     gccctgatgcctgaatatga 454
               ||||||||||||||||||||
Sbjct: 4668541 gccctgatgcctgaatatga 4668522
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 398     tgtggcttaccatgaggctggacatgcc 425
               |||||| |||||||||||||| ||||||
Sbjct: 1102899 tgtggcctaccatgaggctggccatgcc 1102926


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,371,056
Number of Sequences: 3902068
Number of extensions: 4371056
Number of successful extensions: 77568
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77003
Number of HSP's gapped (non-prelim): 560
length of query: 564
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 541
effective length of database: 17,143,297,704
effective search space: 9274524057864
effective search space used: 9274524057864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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