ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62k09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence Length = 1556 Score = 1148 bits (579), Expect = 0.0 Identities = 613/623 (98%), Gaps = 1/623 (0%) Strand = Plus / Plus Query: 9 gctgctcacggagatggacggcttctccggaaacagcggtgtcatcgtgctcgccgcgac 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 gctgctcacggagatggacggcttctccggaaacagcggtgtcatcgtgctcgccgcgac 431 Query: 69 caacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcgatcggcaggt 128 |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 432 caacaggccggatgtgctcgactcggcgcttctgcggccagggcggtttgatcggcaggt 491 Query: 129 caccgtcgaccgtccggatgtagccggccgtgtcaggatccttgaggttcactccagagg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 492 caccgtcgaccgtccggatgtcgccggccgtgtcaggatccttgaggttcactccagagg 551 Query: 189 aaaggcattggcgaaggatgtggactttgataaggttgccagaaggacacctggtttcac 248 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 552 aaaggcattggcgaaggatgtagactttgataaggttgccagaaggacacctggtttcac 611 Query: 249 cggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgcccgtcgtgatct 308 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 612 cggtgctgatcttcagaacttgatgaatgaggctgccatccttgctgctcgtcgtgatct 671 Query: 309 gaaggagataagcaaggacgagatctctgatgctctggagaggatcattgctgggcctga 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 gaaggagataagcaaggacgagatctctgatgctctggagaggatcattgctgggcctga 731 Query: 369 gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 791 Query: 429 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 851 Query: 489 tcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagaggcttcgagt 548 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 852 tcctcgaggtcaagctggtgggctcacgttctttgctccaagcgaagagaggctt-gagt 910 Query: 549 ctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttggtggcaggg 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 ctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttggtggcaggg 970 Query: 609 ttgccgaggaggtgatctttggc 631 ||||||||||||||||||||||| Sbjct: 971 ttgccgaggaggtgatctttggc 993
>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full insert sequence Length = 2378 Score = 660 bits (333), Expect = 0.0 Identities = 526/589 (89%), Gaps = 1/589 (0%) Strand = Plus / Plus Query: 43 agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 102 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| Sbjct: 1141 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 1200 Query: 103 cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 162 || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| |||||| Sbjct: 1201 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 1260 Query: 163 aggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataag 222 | ||| |||||||||||||| ||||||||||| |||| || ||||| |||||||| || Sbjct: 1261 aagattcttgaggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaa 1320 Query: 223 gttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggct 282 ||||| | || || ||||||||||| || ||||||||||| |||||||||||||||||| Sbjct: 1321 attgcccggagaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggct 1380 Query: 283 gccatccttgccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgatgct 342 || || ||||| || |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 1381 gctattcttgctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgct 1440 Query: 343 ctggagaggatcattgctgggcctgagaagaagaatgcagttgtttcagaacagaagagg 402 ||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||| Sbjct: 1441 ttggagaggatcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagagg 1500 Query: 403 aagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatat 462 | ||||||||||||||||||||||| |||||||| || |||||||| |||||||||||| Sbjct: 1501 agacttgtggcttaccatgaggctggtcatgcccttgttggtgccctcatgcctgaatat 1560 Query: 463 gaccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttcttt 522 ||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 1561 gaccctgttgctaagatttccatcattcctcgtggtcaagctggtggactcacattcttt 1620 Query: 523 gctccaagcgaagagaggcttcgagtctggactgtacagcaggagctacctagagaacca 582 ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 1621 gctccaagcgaggagaggctt-gagtctggattgtacagcaggagctacctagagaacca 1679 Query: 583 aatggctgtggcacttggtggcagggttgccgaggaggtgatctttggc 631 |||||| || || |||||||| ||||||||||| ||||||||||||||| Sbjct: 1680 aatggccgtagctcttggtggaagggttgccgaagaggtgatctttggc 1728
>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full insert sequence Length = 1325 Score = 654 bits (330), Expect = 0.0 Identities = 526/589 (89%), Gaps = 3/589 (0%) Strand = Plus / Plus Query: 43 agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 102 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| Sbjct: 199 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 258 Query: 103 cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 162 || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| |||||| Sbjct: 259 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 318 Query: 163 aggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataag 222 | ||| |||||||||||||| ||||||||||| |||| || ||||| |||||||| || Sbjct: 319 aagattcttgaggttcactcgagaggaaaggc--tggcaaaagatgtcgactttgagaaa 376 Query: 223 gttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggct 282 ||||| | || || ||||||||||| || ||||||||||| |||||||||||||||||| Sbjct: 377 attgcccggagaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggct 436 Query: 283 gccatccttgccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgatgct 342 || || ||||| || |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 437 gctattcttgctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgct 496 Query: 343 ctggagaggatcattgctgggcctgagaagaagaatgcagttgtttcagaacagaagagg 402 ||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||| Sbjct: 497 ttggagaggatcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagagg 556 Query: 403 aagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatat 462 | ||||||||||||||||||||||| |||||||| || |||||||| |||||||||||| Sbjct: 557 agacttgtggcttaccatgaggctggtcatgcccttgttggtgccctcatgcctgaatat 616 Query: 463 gaccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttcttt 522 ||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 617 gaccctgttgctaagatttccatcattcctcgtggtcaagctggtggactcacattcttt 676 Query: 523 gctccaagcgaagagaggcttcgagtctggactgtacagcaggagctacctagagaacca 582 ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 677 gctccaagcgaggagaggctt-gagtctggattgtacagcaggagctacctagagaacca 735 Query: 583 aatggctgtggcacttggtggcagggttgccgaggaggtgatctttggc 631 |||||| || || |||||||| ||||||||||| ||||||||||||||| Sbjct: 736 aatggccgtagctcttggtggaagggttgccgaagaggtgatctttggc 784
>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA sequence Length = 890 Score = 583 bits (294), Expect = e-163 Identities = 316/322 (98%), Gaps = 1/322 (0%) Strand = Plus / Plus Query: 309 gaaggagataagcaaggacgagatctctgatgctctggagaggatcattgctgggcctga 368 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 8 gaaggagataagcaaggacgagatctctgatgctctggagaggatcattgctgggcccga 67 Query: 369 gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 gaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctgg 127 Query: 429 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 acatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcat 187 Query: 489 tcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagaggcttcgagt 548 |||||| ||||| |||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 188 tcctcgtggtcaagctggtgggctcacgttctttgctccaagcgaagagaggc-tcgagt 246 Query: 549 ctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttggtggcaggg 608 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ctgggctgtacagcaggagctacctagagaaccaaatggctgtggcacttggtggcaggg 306 Query: 609 ttgccgaggaggtgatctttgg 630 |||||||||||||||||||||| Sbjct: 307 ttgccgaggaggtgatctttgg 328
>gb|AY103957.1| Zea mays PCO116832 mRNA sequence Length = 1820 Score = 547 bits (276), Expect = e-152 Identities = 532/616 (86%), Gaps = 1/616 (0%) Strand = Plus / Plus Query: 16 acggagatggacggcttctccggaaacagcggtgtcatcgtgctcgccgcgaccaacagg 75 ||||||||||| |||||| | || |||||||||||||| ||||| ||||| ||||||||| Sbjct: 466 acggagatggatggcttcgctggcaacagcggtgtcattgtgcttgccgccaccaacagg 525 Query: 76 ccggatgtgcttgactccgcgcttctgcggccagggcggttcgatcggcaggtcaccgtc 135 || |||||||| ||||||||||| || || |||||| | || ||| ||||||||||||| Sbjct: 526 cccgatgtgctggactccgcgctcctacgaccagggagatttgataggcaggtcaccgtt 585 Query: 136 gaccgtccggatgtagccggccgtgtcaggatccttgaggttcactccagaggaaaggca 195 ||| | || ||||| ||||| || |||| ||| |||||||| |||||| |||||||||| Sbjct: 586 gacaggccagatgttgccggacgcgtcaagattcttgaggtccactcccgaggaaaggct 645 Query: 196 ttggcgaaggatgtggactttgataaggttgccagaaggacacctggtttcaccggtgct 255 |||||||| ||||| || |||||||| |||| |||||||| ||||||||||| |||||| Sbjct: 646 ttggcgaaagatgttgattttgataaaattgctagaaggacccctggtttcactggtgct 705 Query: 256 gatcttcagaacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggag 315 || || || ||| | ||||||||||||||||||||||| || || |||||||| ||||| Sbjct: 706 gacctccaaaacctcatgaatgaggctgccatccttgctgctcgccgtgatcttaaggaa 765 Query: 316 ataagcaaggacgagatctctgatgctctggagaggatcattgctgggcctgagaagaag 375 || |||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 766 attagcaaggatgagatctctgatgctcttgagagaatcattgctggccctgagaagaaa 825 Query: 376 aatgcagttgtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgcc 435 ||||| |||||||| || |||||| || ||| || ||||||||||||||||| |||||| Sbjct: 826 aatgctgttgtttccgaggagaagaagaggctcgtcgcttaccatgaggctggccatgcc 885 Query: 436 ctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcga 495 || ||||| ||||| ||||| || ||||| || || ||||||||||||||||| ||||| Sbjct: 886 cttgtcggcgccctcatgccagagtatgatccagtagccaagatttccatcatccctcgt 945 Query: 496 ggtcaggctggtggtctcacgttctttgctccaagcgaagagaggcttcgagtctggact 555 || ||||||||||| ||||| |||||||||||||||||||| |||| | || |||||| | Sbjct: 946 ggccaggctggtggactcacattctttgctccaagcgaagaaaggc-tagaatctggatt 1004 Query: 556 gtacagcaggagctacctagagaaccaaatggctgtggcacttggtggcagggttgccga 615 ||||||||||||||| || ||||||||||||||||| || ||||||||||||||||| || Sbjct: 1005 gtacagcaggagctatcttgagaaccaaatggctgtagcccttggtggcagggttgctga 1064 Query: 616 ggaggtgatctttggc 631 |||||||||||||||| Sbjct: 1065 ggaggtgatctttggc 1080
>ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent peptidase/ ATPase/ metallopeptidase AT1G50250 (FTSH1) mRNA, complete cds Length = 2473 Score = 369 bits (186), Expect = 7e-99 Identities = 367/426 (86%), Gaps = 1/426 (0%) Strand = Plus / Plus Query: 205 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 264 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1490 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1549 Query: 265 aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 324 ||| |||||||||| || || || ||||| || | ||||| || ||||| ||||||||| Sbjct: 1550 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1609 Query: 325 gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 384 || || |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 1610 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1669 Query: 385 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 444 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || ||| Sbjct: 1670 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1729 Query: 445 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 504 || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || ||| Sbjct: 1730 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1789 Query: 505 ggtggtctcacgttctttgctccaagcgaagagaggcttcgagtctggactgtacagcag 564 ||||| ||||| || ||||||||||||||||| || ||| ||||||||| ||||||| || Sbjct: 1790 ggtgggctcactttttttgctccaagcgaagaaagactt-gagtctggattgtacagtag 1848 Query: 565 gagctacctagagaaccaaatggctgtggcacttggtggcagggttgccgaggaggtgat 624 ||||||||| ||||| ||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 1849 gagctaccttgagaatcaaatggctgttgcacttggcggaagggttgcagaggaggtgat 1908 Query: 625 ctttgg 630 |||||| Sbjct: 1909 ctttgg 1914
>gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250) mRNA, complete cds Length = 2182 Score = 369 bits (186), Expect = 7e-99 Identities = 367/426 (86%), Gaps = 1/426 (0%) Strand = Plus / Plus Query: 205 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 264 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1357 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1416 Query: 265 aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 324 ||| |||||||||| || || || ||||| || | ||||| || ||||| ||||||||| Sbjct: 1417 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1476 Query: 325 gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 384 || || |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 1477 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1536 Query: 385 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 444 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || ||| Sbjct: 1537 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1596 Query: 445 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 504 || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || ||| Sbjct: 1597 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1656 Query: 505 ggtggtctcacgttctttgctccaagcgaagagaggcttcgagtctggactgtacagcag 564 ||||| ||||| || ||||||||||||||||| || ||| ||||||||| ||||||| || Sbjct: 1657 ggtgggctcactttttttgctccaagcgaagaaagactt-gagtctggattgtacagtag 1715 Query: 565 gagctacctagagaaccaaatggctgtggcacttggtggcagggttgccgaggaggtgat 624 ||||||||| ||||| ||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 1716 gagctaccttgagaatcaaatggctgttgcacttggcggaagggttgcagaggaggtgat 1775 Query: 625 ctttgg 630 |||||| Sbjct: 1776 ctttgg 1781
>gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250) mRNA, complete cds Length = 2452 Score = 369 bits (186), Expect = 7e-99 Identities = 367/426 (86%), Gaps = 1/426 (0%) Strand = Plus / Plus Query: 205 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 264 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1453 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1512 Query: 265 aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 324 ||| |||||||||| || || || ||||| || | ||||| || ||||| ||||||||| Sbjct: 1513 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1572 Query: 325 gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 384 || || |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 1573 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1632 Query: 385 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 444 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || ||| Sbjct: 1633 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1692 Query: 445 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 504 || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || ||| Sbjct: 1693 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1752 Query: 505 ggtggtctcacgttctttgctccaagcgaagagaggcttcgagtctggactgtacagcag 564 ||||| ||||| || ||||||||||||||||| || ||| ||||||||| ||||||| || Sbjct: 1753 ggtgggctcactttttttgctccaagcgaagaaagactt-gagtctggattgtacagtag 1811 Query: 565 gagctacctagagaaccaaatggctgtggcacttggtggcagggttgccgaggaggtgat 624 ||||||||| ||||| ||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 1812 gagctaccttgagaatcaaatggctgttgcacttggcggaagggttgcagaggaggtgat 1871 Query: 625 ctttgg 630 |||||| Sbjct: 1872 ctttgg 1877
>emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease Length = 2447 Score = 361 bits (182), Expect = 2e-96 Identities = 366/426 (85%), Gaps = 1/426 (0%) Strand = Plus / Plus Query: 205 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 264 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1488 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1547 Query: 265 aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 324 ||| |||||||||| || || || ||||| || | ||||| | ||||| ||||||||| Sbjct: 1548 aacctgatgaatgaagcggcgattcttgcggctaggcgtgacgttaaggaaataagcaag 1607 Query: 325 gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 384 || || |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 1608 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1667 Query: 385 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 444 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || ||| Sbjct: 1668 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctagtgggt 1727 Query: 445 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 504 || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || ||| Sbjct: 1728 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1787 Query: 505 ggtggtctcacgttctttgctccaagcgaagagaggcttcgagtctggactgtacagcag 564 ||||| ||||| || ||||||||||||||||| || ||| ||||||||| ||||||| || Sbjct: 1788 ggtgggctcactttttttgctccaagcgaagaaagactt-gagtctggattgtacagtag 1846 Query: 565 gagctacctagagaaccaaatggctgtggcacttggtggcagggttgccgaggaggtgat 624 ||||||||| ||||| ||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 1847 gagctaccttgagaatcaaatggctgttgcacttggcggaagggttgcagaggaggtgat 1906 Query: 625 ctttgg 630 |||||| Sbjct: 1907 ctttgg 1912
>emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS28ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2428 Score = 337 bits (170), Expect = 3e-89 Identities = 363/426 (85%), Gaps = 1/426 (0%) Strand = Plus / Plus Query: 205 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 264 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 1489 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 1548 Query: 265 aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 324 ||| |||||||||| || || || ||||| || | ||||| || ||||| ||||||||| Sbjct: 1549 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1608 Query: 325 gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 384 || || |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 1609 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1668 Query: 385 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtcggt 444 || || ||| |||||| || ||||| || ||||||||||||| ||||| || || ||| Sbjct: 1669 gtctctgaagagaagaagagacttgttgcacaccatgaggctggtcatgctctagtgggt 1728 Query: 445 gccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggct 504 || || ||||| |||||||| || ||||| |||||||| ||||||||||| || || ||| Sbjct: 1729 gctcttatgccagaatatgatccggttgcaaagatttctatcattcctcgtggccaagct 1788 Query: 505 ggtggtctcacgttctttgctccaagcgaagagaggcttcgagtctggactgtacagcag 564 ||||| ||||| || ||||||||||||||||| || ||| ||||||||| ||||||| || Sbjct: 1789 ggtgggctcactttttttgctccaagcgaagaaagactt-gagtctggattgtacagtag 1847 Query: 565 gagctacctagagaaccaaatggctgtggcacttggtggcagggttgccgaggaggtgat 624 ||||||||| ||||| ||||||||||| |||||||| || || || | ||||||||||| Sbjct: 1848 gagctaccttgagaatcaaatggctgttgcacttggcggaagtttttcagaggaggtgat 1907 Query: 625 ctttgg 630 |||||| Sbjct: 1908 ctttgg 1913
>emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein Length = 1989 Score = 315 bits (159), Expect = 1e-82 Identities = 394/471 (83%), Gaps = 1/471 (0%) Strand = Plus / Plus Query: 160 gtcaggatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgat 219 |||||||| ||| |||| || || ||||||||||| | || |||||||||||||||||| Sbjct: 1218 gtcaggattcttcaggtacattctagaggaaaggcccttgcaaaggatgtggactttgat 1277 Query: 220 aaggttgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgag 279 ||| ||||||| || || || |||||||| ||||| ||| | || ||||||||||| || Sbjct: 1278 aagattgccaggagaactccaggtttcactggtgcagatttacaaaacttgatgaacgaa 1337 Query: 280 gctgccatccttgccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgat 339 || ||||||||||| || | ||||| || ||||| ||||| || || ||||| |||||| Sbjct: 1338 gcagccatccttgcagctaggcgtgacctaaaggaaataagtaaagatgagatatctgat 1397 Query: 340 gctctggagaggatcattgctgggcctgagaagaagaatgcagttgtttcagaacagaag 399 |||||||||||||| |||||||| || |||||||| || || ||||| ||||| ||||| Sbjct: 1398 gctctggagaggataattgctggtccggagaagaaaaacgctgttgtctcagatgagaag 1457 Query: 400 aggaagcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaa 459 | |||||| || ||||| ||||||||||| |||||| | || ||||| || ||||| || Sbjct: 1458 aagaagctggtagcttatcatgaggctggccatgccttggttggtgcacttatgcccgag 1517 Query: 460 tatgaccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttc 519 ||||| |||||||||||||| || || |||||||| || || || ||||||||||| ||| Sbjct: 1518 tatgatcctgttgccaagatatctataattcctcgtggccaagccggtggtctcaccttc 1577 Query: 520 tttgctccaagcgaagagaggcttcgagtctggactgtacagcaggagctacctagagaa 579 ||||| || |||||||| || ||| ||||| || |||||||||||||||||||||||||| Sbjct: 1578 tttgcccccagcgaagaaagactt-gagtcaggcctgtacagcaggagctacctagagaa 1636 Query: 580 ccaaatggctgtggcacttggtggcagggttgccgaggaggtgatctttgg 630 |||||||| || ||||||||||| |||||||| |||||||| || ||||| Sbjct: 1637 tcaaatggcagttgcacttggtggaagggttgctgaggaggttatttttgg 1687
>emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial Length = 2190 Score = 299 bits (151), Expect = 6e-78 Identities = 361/427 (84%), Gaps = 3/427 (0%) Strand = Plus / Plus Query: 205 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 264 |||||||||||||| ||||||||||||||| | ||||||||||| |||||||| | || Sbjct: 1153 gatgtggactttgacaaggttgccagaaggtcccctggtttcacgggtgctgacttacaa 1212 Query: 265 aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 324 ||| |||||||||| || || || ||||| || | ||||| || ||||| ||||||||| Sbjct: 1213 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 1272 Query: 325 gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 384 || || |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 1273 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 1332 Query: 385 gtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccct-cgtcgg 443 || || ||| |||||| || ||||| || |||||||||||||| ||||| || || || Sbjct: 1333 gtctctgaagagaagaagagacttgttgcataccatgaggctggtcatgctctaggtggg 1392 Query: 444 tgccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcaggc 503 ||| || || || |||||| | || ||||| |||||||| ||||||||||| || || || Sbjct: 1393 tgctcttat-ccagaatataatccggttgcaaagatttctatcattcctcgtggccaagc 1451 Query: 504 tggtggtctcacgttctttgctccaagcgaagagaggcttcgagtctggactgtacagca 563 |||||| ||||| || ||||||||||||||||| || ||| ||||||||| ||||||| | Sbjct: 1452 tggtgggctcactttttttgctccaagcgaagaaagactt-gagtctggattgtacagta 1510 Query: 564 ggagctacctagagaaccaaatggctgtggcacttggtggcagggttgccgaggaggtga 623 |||||||||| ||||| ||||||||| ||||||| || |||||||| |||||||||| Sbjct: 1511 ggagctaccttgagaatcaaatggcttgttcacttggcggaagggttgcagaggaggtga 1570 Query: 624 tctttgg 630 ||||||| Sbjct: 1571 tctttgg 1577
>gb|DQ339462.1| Vitis pseudoreticulata ATPase mRNA, complete cds Length = 600 Score = 283 bits (143), Expect = 3e-73 Identities = 366/439 (83%), Gaps = 1/439 (0%) Strand = Plus / Plus Query: 165 gatccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggt 224 ||||||| |||| ||||| ||||| |||||| | || |||||||| |||||||| ||| | Sbjct: 144 gatccttcaggtgcactcaagagggaaggcactagccaaggatgtagactttgaaaagat 203 Query: 225 tgccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgc 284 ||| |||||||| || || ||||| || ||||| | |||||| ||||||||||||| || Sbjct: 204 tgcgagaaggaccccaggcttcacaggggctgacttgcagaacctgatgaatgaggcagc 263 Query: 285 catccttgccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgatgctct 344 |||||| || || | ||||| || ||||||||||||||||| ||||| |||||||| || Sbjct: 264 catcctcgcagctaggcgtgacctcaaggagataagcaaggatgagatatctgatgccct 323 Query: 345 ggagaggatcattgctgggcctgagaagaagaatgcagttgtttcagaacagaagaggaa 404 ||||||||| ||||||||||| |||||||| ||||| || || ||||| |||||| ||| Sbjct: 324 ggagaggataattgctgggccagagaagaaaaatgctgtggtctcagacgagaagaagaa 383 Query: 405 gcttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatga 464 | || || || ||||||||||| ||||| | |||||||| || |||||||||||||| Sbjct: 384 attagttgcctatcatgaggctgggcatgcattggtcggtgcacttatgcctgaatatga 443 Query: 465 ccctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttctttgc 524 |||||| |||||||| ||||||||||| || || || || |||||||| || || ||||| Sbjct: 444 ccctgtggccaagatatccatcattccccgtggccaagcaggtggtcttaccttttttgc 503 Query: 525 tccaagcgaagagaggcttcgagtctggactgtacagcaggagctacctagagaaccaaa 584 |||||| |||||||| | ||||||||||||||||||| || || ||||| ||||| || | Sbjct: 504 tccaagtgaagagagac-tcgagtctggactgtacagtagaagttacctggagaatcaga 562 Query: 585 tggctgtggcacttggtgg 603 ||||||| ||||| ||||| Sbjct: 563 tggctgttgcactgggtgg 581
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 272 bits (137), Expect = 1e-69 Identities = 221/249 (88%) Strand = Plus / Minus Query: 173 aggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggttgccagaa 232 |||||||||| ||||||||||| |||| || ||||| |||||||| || ||||| | | Sbjct: 30360113 aggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaaattgcccgga 30360054 Query: 233 ggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttg 292 | || ||||||||||| || ||||||||||| |||||||||||||||||||| || |||| Sbjct: 30360053 gaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggctgctattcttg 30359994 Query: 293 ccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgatgctctggagagga 352 | || |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||| Sbjct: 30359993 ctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgctttggagagga 30359934 Query: 353 tcattgctgggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtgg 412 |||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||| Sbjct: 30359933 tcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagaggagacttgtgg 30359874 Query: 413 cttaccatg 421 ||||||||| Sbjct: 30359873 cttaccatg 30359865 Score = 236 bits (119), Expect = 7e-59 Identities = 168/183 (91%), Gaps = 1/183 (0%) Strand = Plus / Minus Query: 421 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 480 |||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||||| Sbjct: 30359771 gaggctggtcatgcccttgttggtgccctcatgcctgaatatgaccctgttgctaagatt 30359712 Query: 481 tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 540 |||||||||||||| ||||| |||||||| ||||| ||||||||||||||||| |||||| Sbjct: 30359711 tccatcattcctcgtggtcaagctggtggactcacattctttgctccaagcgaggagagg 30359652 Query: 541 cttcgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttgg 600 ||| ||||||||| |||||||||||||||||||||||||||||||||| || || ||||| Sbjct: 30359651 ctt-gagtctggattgtacagcaggagctacctagagaaccaaatggccgtagctcttgg 30359593 Query: 601 tgg 603 ||| Sbjct: 30359592 tgg 30359590 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Minus Query: 43 agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 102 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| Sbjct: 30360948 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 30360889 Query: 103 cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 162 || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| |||||| Sbjct: 30360888 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 30360829 Query: 163 aggatccttgaggt 176 | ||| |||||||| Sbjct: 30360828 aagattcttgaggt 30360815 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 603 gcagggttgccgaggaggtgatctttggc 631 ||||||||||||| ||||||||||||||| Sbjct: 30359501 gcagggttgccgaagaggtgatctttggc 30359473
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 272 bits (137), Expect = 1e-69 Identities = 221/249 (88%) Strand = Plus / Minus Query: 173 aggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggttgccagaa 232 |||||||||| ||||||||||| |||| || ||||| |||||||| || ||||| | | Sbjct: 106708 aggttcactcgagaggaaaggctctggcaaaagatgtcgactttgagaaaattgcccgga 106649 Query: 233 ggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttg 292 | || ||||||||||| || ||||||||||| |||||||||||||||||||| || |||| Sbjct: 106648 gaacccctggtttcactggagctgatcttcaaaacttgatgaatgaggctgctattcttg 106589 Query: 293 ccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgatgctctggagagga 352 | || |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||| Sbjct: 106588 ctgctcgtcgtgatctgaaggagattagcaaggatgagatctctgatgctttggagagga 106529 Query: 353 tcattgctgggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtgg 412 |||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||| Sbjct: 106528 tcattgctgggcctgagaagaaaaatgctgttgtttcagaagagaagaggagacttgtgg 106469 Query: 413 cttaccatg 421 ||||||||| Sbjct: 106468 cttaccatg 106460 Score = 236 bits (119), Expect = 7e-59 Identities = 168/183 (91%), Gaps = 1/183 (0%) Strand = Plus / Minus Query: 421 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 480 |||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||||| Sbjct: 106366 gaggctggtcatgcccttgttggtgccctcatgcctgaatatgaccctgttgctaagatt 106307 Query: 481 tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 540 |||||||||||||| ||||| |||||||| ||||| ||||||||||||||||| |||||| Sbjct: 106306 tccatcattcctcgtggtcaagctggtggactcacattctttgctccaagcgaggagagg 106247 Query: 541 cttcgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttgg 600 ||| ||||||||| |||||||||||||||||||||||||||||||||| || || ||||| Sbjct: 106246 ctt-gagtctggattgtacagcaggagctacctagagaaccaaatggccgtagctcttgg 106188 Query: 601 tgg 603 ||| Sbjct: 106187 tgg 106185 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Minus Query: 43 agcggtgtcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctg 102 ||||||||||| |||||||||||||| |||||||| |||||||| ||| | || ||||| Sbjct: 107543 agcggtgtcattgtgctcgccgcgacaaacaggcctgatgtgctcgacgcggctcttctt 107484 Query: 103 cggccagggcggttcgatcggcaggtcaccgtcgaccgtccggatgtagccggccgtgtc 162 || || ||| |||||||||||||||||||||| ||| | |||||||| ||||| |||||| Sbjct: 107483 cgccctgggaggttcgatcggcaggtcaccgtagacaggccggatgtcgccgggcgtgtc 107424 Query: 163 aggatccttgaggt 176 | ||| |||||||| Sbjct: 107423 aagattcttgaggt 107410 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 603 gcagggttgccgaggaggtgatctttggc 631 ||||||||||||| ||||||||||||||| Sbjct: 106096 gcagggttgccgaagaggtgatctttggc 106068
>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds Length = 2447 Score = 272 bits (137), Expect = 1e-69 Identities = 357/429 (83%), Gaps = 1/429 (0%) Strand = Plus / Plus Query: 202 aaggatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatctt 261 ||||||||||||||||| ||| ||||||| || ||||| |||| ||| ||||| ||| | Sbjct: 1348 aaggatgtggactttgagaagattgccaggagaacaccgggttacactggtgcagatttg 1407 Query: 262 cagaacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagc 321 || ||||||||||| || || || |||||||| || | ||||| || ||||| ||||| Sbjct: 1408 caaaacttgatgaacgaagcagcaatccttgcagctaggcgtgaactaaaggaaataagt 1467 Query: 322 aaggacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgca 381 || || ||||| |||||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 1468 aaagatgagatatctgatgctctggagaggataattgccggcccagagaagaaaaatgct 1527 Query: 382 gttgtttcagaacagaagaggaagcttgtggcttaccatgaggctggacatgccctcgtc 441 ||||| ||||| |||||| |||||| || ||||| |||||||| || |||||| | || Sbjct: 1528 gttgtctcagatgagaagaagaagctggtagcttatcatgaggccggccatgccttggtt 1587 Query: 442 ggtgccctgatgcctgaatatgaccctgttgccaagatttccatcattcctcgaggtcag 501 ||||| || ||||| || ||||| |||||||||||||| || || ||||||||||| || Sbjct: 1588 ggtgcacttatgcccgagtatgatcctgttgccaagatatctataattcctcgaggccaa 1647 Query: 502 gctggtggtctcacgttctttgctccaagcgaagagaggcttcgagtctggactgtacag 561 ||||||||||| || |||||||| || |||||||| || ||| ||||| || ||||||| Sbjct: 1648 gctggtggtcttaccttctttgcccccagcgaagaaagactt-gagtcgggcttgtacag 1706 Query: 562 caggagctacctagagaaccaaatggctgtggcacttggtggcagggttgccgaggaggt 621 |||||||||||||||||| |||||||| || |||||||||| |||||||| |||||||| Sbjct: 1707 caggagctacctagagaatcaaatggcagttgcacttggtgaaagggttgctgaggaggt 1766 Query: 622 gatctttgg 630 || ||||| Sbjct: 1767 tatttttgg 1775
>ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase AT5G42270 (VAR1) mRNA, complete cds Length = 3058 Score = 250 bits (126), Expect = 5e-63 Identities = 325/390 (83%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 241 ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgcccgt 300 |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| || | Sbjct: 1530 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 1589 Query: 301 cgtgatctgaaggagataagcaaggacgagatctctgatgctctggagaggatcattgct 360 ||||| || ||||||||||||||||| || || ||||||||||| ||||||||||||||| Sbjct: 1590 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 1649 Query: 361 gggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccat 420 || ||||| |||||||| || ||||| || || |||||| | ||||| ||||||||| Sbjct: 1650 ggacctgaaaagaagaacgctgttgtctctgaggagaagaaaagacttgttgcttaccat 1709 Query: 421 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 480 |||||||| ||||| | || ||||| || ||||| || ||||| || || |||||||| Sbjct: 1710 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagata 1769 Query: 481 tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 540 || || ||||| || || || |||||||| ||||| || || ||||| |||||||||||| Sbjct: 1770 tcgattattccacgtggccaagctggtgggctcacctttttcgctcctagcgaagagagg 1829 Query: 541 cttcgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttgg 600 | | ||||| ||| |||| ||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1830 c-tagagtccggattgtatagcagaagctaccttgagaaccaaatggctgttgcacttgg 1888 Query: 601 tggcagggttgccgaggaggtgatctttgg 630 ||| |||||||| || |||||||||||||| Sbjct: 1889 tggaagggttgcagaagaggtgatctttgg 1918
>gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, complete cds Length = 2311 Score = 250 bits (126), Expect = 5e-63 Identities = 325/390 (83%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 241 ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgcccgt 300 |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| || | Sbjct: 1456 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 1515 Query: 301 cgtgatctgaaggagataagcaaggacgagatctctgatgctctggagaggatcattgct 360 ||||| || ||||||||||||||||| || || ||||||||||| ||||||||||||||| Sbjct: 1516 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 1575 Query: 361 gggcctgagaagaagaatgcagttgtttcagaacagaagaggaagcttgtggcttaccat 420 || ||||| |||||||| || ||||| || || |||||| | ||||| ||||||||| Sbjct: 1576 ggacctgaaaagaagaacgctgttgtctctgaggagaagaaaagacttgttgcttaccat 1635 Query: 421 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 480 |||||||| ||||| | || ||||| || ||||| || ||||| || || |||||||| Sbjct: 1636 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagata 1695 Query: 481 tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 540 || || ||||| || || || |||||||| ||||| || || ||||| |||||||||||| Sbjct: 1696 tcgattattccacgtggccaagctggtgggctcacctttttcgctcctagcgaagagagg 1755 Query: 541 cttcgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttgg 600 | | ||||| ||| |||| ||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1756 c-tagagtccggattgtatagcagaagctaccttgagaaccaaatggctgttgcacttgg 1814 Query: 601 tggcagggttgccgaggaggtgatctttgg 630 ||| |||||||| || |||||||||||||| Sbjct: 1815 tggaagggttgcagaagaggtgatctttgg 1844
>gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, complete cds; chloroplast gene for chloroplast product Length = 2352 Score = 198 bits (100), Expect = 2e-47 Identities = 368/456 (80%), Gaps = 1/456 (0%) Strand = Plus / Plus Query: 166 atccttgaggttcactccagaggaaaggcattggcgaaggatgtggactttgataaggtt 225 |||||| |||| || || |||||||| ||| | || |||||||| |||||||| || || Sbjct: 1343 atccttcaggtgcattctagaggaaaagcacttgcaaaggatgttgactttgacaaaatt 1402 Query: 226 gccagaaggacacctggtttcaccggtgctgatcttcagaacttgatgaatgaggctgcc 285 ||||| || || || || ||||| || | |||||| ||||| ||||||| || || || Sbjct: 1403 gccaggagaaccccagggttcacaggagttgatctgcagaatctgatgaacgaagcagct 1462 Query: 286 atccttgccgcccgtcgtgatctgaaggagataagcaaggacgagatctctgatgctctg 345 || ||||| ||| | ||||| || || || ||||| || || ||||| ||||||| || Sbjct: 1463 attcttgctgccaggcgtgacctcaaagaaataagtaaagatgagatagctgatgcgctt 1522 Query: 346 gagaggatcattgctgggcctgagaagaagaatgcagttgtttcagaacagaagaggaag 405 || |||||||||||||| || || ||||| ||||| ||||| |||||| |||||| ||| Sbjct: 1523 gaaaggatcattgctggaccagaaaagaaaaatgccgttgtctcagaagagaagaagaaa 1582 Query: 406 cttgtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgac 465 | || || || ||||||||||| ||||| | || ||||| ||||||||||||||||| Sbjct: 1583 ttagtagcctatcatgaggctggccatgctttagtgggtgctttgatgcctgaatatgac 1642 Query: 466 cctgttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttctttgct 525 ||||| |||||||| || || || ||||| || || |||||||||||||| || |||||| Sbjct: 1643 cctgtagccaagatatctattatacctcgtggccaagctggtggtctcaccttttttgct 1702 Query: 526 ccaagcgaagagaggcttcgagtctggactgtacagcaggagctacctagagaaccaaat 585 || ||||||||||||||| ||||||||| ||||||| || |||||| | ||||| || || Sbjct: 1703 cctagcgaagagaggctt-gagtctggattgtacagtagaagctacttggagaatcagat 1761 Query: 586 ggctgtggcacttggtggcagggttgccgaggaggt 621 ||| || |||||||| || ||||||||||| ||||| Sbjct: 1762 ggcggttgcacttggaggaagggttgccgaagaggt 1797
>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete sequence Length = 100975 Score = 184 bits (93), Expect = 2e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 205 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgatcttcag 264 |||||||||||||| ||||||||||||||||| ||||||||||| |||||||| | || Sbjct: 61377 gatgtggactttgacaaggttgccagaaggacccctggtttcacgggtgctgacttacaa 61436 Query: 265 aacttgatgaatgaggctgccatccttgccgcccgtcgtgatctgaaggagataagcaag 324 ||| |||||||||| || || || ||||| || | ||||| || ||||| ||||||||| Sbjct: 61437 aacctgatgaatgaagcggcgattcttgcggctaggcgtgagcttaaggaaataagcaag 61496 Query: 325 gacgagatctctgatgctctggagaggatcattgctgggcctgagaagaagaatgcagtt 384 || || |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 61497 gatgaaatctctgatgctcttgagaggatcattgctggacctgagaagaagaatgcagtt 61556 Query: 385 gtttcagaacagaagaggaagcttgtggcttaccatg 421 || || ||| |||||| || ||||| || ||||||| Sbjct: 61557 gtctctgaagagaagaagagacttgttgcataccatg 61593 Score = 151 bits (76), Expect = 3e-33 Identities = 155/180 (86%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 421 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 480 |||||||| ||||| || || ||||| || ||||| |||||||| || ||||| |||||| Sbjct: 61680 gaggctggtcatgctctagtgggtgctcttatgccagaatatgatccggttgcaaagatt 61739 Query: 481 tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 540 || ||||||||||| || || |||||||| ||||| || ||||||||||||||||| || Sbjct: 61740 tctatcattcctcgtggccaagctggtgggctcactttttttgctccaagcgaagaaaga 61799 Query: 541 cttcgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttgg 600 ||| ||||||||| ||||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 61800 ctt-gagtctggattgtacagtaggagctaccttgagaatcaaatggctgttgcacttgg 61858 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 604 cagggttgccgaggaggtgatctttgg 630 ||||||||| ||||||||||||||||| Sbjct: 61973 cagggttgcagaggaggtgatctttgg 61999
>gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full insert mRNA sequence Length = 654 Score = 159 bits (80), Expect = 1e-35 Identities = 86/88 (97%) Strand = Plus / Plus Query: 544 cgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttggtgg 603 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgagtctggactatacagcaggagctacctagagaaccaaatggctgtggcacttggtgg 60 Query: 604 cagggttgccgaggaggtgatctttggc 631 |||||||||||||||||| ||||||||| Sbjct: 61 cagggttgccgaggaggttatctttggc 88
>dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14 Length = 59762 Score = 123 bits (62), Expect = 7e-25 Identities = 125/146 (85%) Strand = Plus / Plus Query: 241 ggtttcaccggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgcccgt 300 |||||||| ||||||||| | |||||| |||||||||| ||||| || ||||| || | Sbjct: 42638 ggtttcactggtgctgatttgcagaacctgatgaatgaagctgcgattcttgctgctaga 42697 Query: 301 cgtgatctgaaggagataagcaaggacgagatctctgatgctctggagaggatcattgct 360 ||||| || ||||||||||||||||| || || ||||||||||| ||||||||||||||| Sbjct: 42698 cgtgagcttaaggagataagcaaggatgaaatatctgatgctcttgagaggatcattgct 42757 Query: 361 gggcctgagaagaagaatgcagttgt 386 || ||||| |||||||| || ||||| Sbjct: 42758 ggacctgaaaagaagaacgctgttgt 42783 Score = 101 bits (51), Expect = 3e-18 Identities = 151/183 (82%), Gaps = 1/183 (0%) Strand = Plus / Plus Query: 421 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 480 |||||||| ||||| | || ||||| || ||||| || ||||| || || |||||||| Sbjct: 42899 gaggctgggcatgctttagttggtgcacttatgccggagtatgatccagtggccaagata 42958 Query: 481 tccatcattcctcgaggtcaggctggtggtctcacgttctttgctccaagcgaagagagg 540 || || ||||| || || || |||||||| ||||| || || ||||| |||||||||||| Sbjct: 42959 tcgattattccacgtggccaagctggtgggctcacctttttcgctcctagcgaagagagg 43018 Query: 541 cttcgagtctggactgtacagcaggagctacctagagaaccaaatggctgtggcacttgg 600 || ||||| ||| |||| ||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 43019 cta-gagtccggattgtatagcagaagctaccttgagaaccaaatggctgttgcacttgg 43077 Query: 601 tgg 603 ||| Sbjct: 43078 tgg 43080
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 409 gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccct 468 |||||||| || ||||| || ||||||||||||||||| ||||||||||| || ||||| Sbjct: 1951862 gtggcttatcacgaggcaggccatgccctcgtcggtgctctgatgcctgattacgacccc 1951803 Query: 469 gttgccaagatttccatcattcctcgaggtcaggctggtggtctcacgttctt 521 ||| |||||||| ||||||||||| || | || || |||||||||||||| Sbjct: 1951802 gttcaaaagatttcgatcattcctcgcggcaatgccggcggtctcacgttctt 1951750
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 475 aagatttccatcattcctcgaggtcaggctggtggtctcacgttctt 521 |||||||||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 154926 aagatttccatcattcctcgtggtcaggcgggtggtctcacattctt 154880
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 421 gaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccctgttgccaagatt 480 |||||||| |||||||| || ||||||||||||||||| || ||||| ||| ||||| Sbjct: 305543 gaggctggccatgcccttgtgggtgccctgatgcctgactacgacccagttcagaagatc 305602 Query: 481 tccatcattcc 491 ||||||||||| Sbjct: 305603 tccatcattcc 305613
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 247 accggtgctgatcttcagaacttgatgaatgaggctgccatccttgccgcccgtcgtgat 306 |||||||||||||| ||| || ||||||||||||||||||| || |||||||| || Sbjct: 303834 accggtgctgatctggccaacctgctgaatgaggctgccatcctggctgcccgtcgcgaa 303893 Query: 307 ctgaaggagataagcaaggacgagatc 333 |||| ||| | ||||| ||||||||| Sbjct: 303894 ctgaccgaggtcagcaacgacgagatc 303920
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 50 tcatcgtgctcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccag 109 |||||||| |||||||||||||| | || || ||||| || ||||||| |||||||| | Sbjct: 1984109 tcatcgtgatcgccgcgaccaaccgccccgacgtgctcgatcccgcgctgctgcggccgg 1984050 Query: 110 ggcggttcga 119 | |||||||| Sbjct: 1984049 gccggttcga 1984040
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 9 gctgctcacggagatggacggcttc 33 ||||||||||||||||||||||||| Sbjct: 1210295 gctgctcacggagatggacggcttc 1210271
>emb|AJ488199.1|PVI488199 Uncultured bacterium gene for putative zinc metallopeptidase, clone 8 Length = 1884 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 9 gctgctcacggagatggacggcttc 33 ||||||||||||||||||||||||| Sbjct: 849 gctgctcacggagatggacggcttc 873
>gb|AE009302.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 72 of 187 of the complete sequence Length = 10906 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 59 tcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcg 118 ||||||| |||||| | || ||||| |||||| ||||||||||||| || || || |||| Sbjct: 2702 tcgccgctaccaaccgtcctgatgttcttgaccccgcgcttctgcgtcccggccgtttcg 2643 Query: 119 atcggcaggtc 129 | || |||||| Sbjct: 2642 accgtcaggtc 2632
>gb|AE008312.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 116 of 187 of the complete sequence Length = 11049 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 59 tcgccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcg 118 ||||||| |||||| | || ||||| |||||| ||||||||||||| || || || |||| Sbjct: 4241 tcgccgctaccaaccgtcctgatgttcttgaccccgcgcttctgcgtcccggccgtttcg 4300 Query: 119 atcggcaggtc 129 | || |||||| Sbjct: 4301 accgtcaggtc 4311
>ref|XM_782306.1| PREDICTED: Strongylocentrotus purpuratus similar to YME1-like 1 isoform 1 (LOC582354), mRNA Length = 2071 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 224 ttgccagaaggacacctggtttcaccggtgctgatcttcagaa 266 |||||||| ||||| ||||||||| || |||||||||||||| Sbjct: 620 ttgccagagggacagttggtttcacaggggctgatcttcagaa 662
>emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; segment 3/5 Length = 348178 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 224 ttgccagaaggacacctggtttcaccggtgctgat 258 |||| ||||||||||||||||| ||||| |||||| Sbjct: 5936 ttgcaagaaggacacctggttttaccggagctgat 5902
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 409 gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccc 467 ||||||||||| || ||||| || ||| | ||||||||| |||||||||| || ||||| Sbjct: 1324762 gtggcttaccacgaagctggtcacgccttggtcggtgccttgatgcctgactacgaccc 1324704
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 409 gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatgaccc 467 ||||||||||| || ||||| || ||| | ||||||||| |||||||||| || ||||| Sbjct: 296120 gtggcttaccacgaagctggtcacgccttggtcggtgccttgatgcctgactacgaccc 296178
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 44.1 bits (22), Expect = 0.55 Identities = 46/54 (85%) Strand = Plus / Minus Query: 205 gatgtggactttgataaggttgccagaaggacacctggtttcaccggtgctgat 258 ||||| ||| ||||||||||||| ||||| || ||||| || || ||||||||| Sbjct: 220557 gatgtagaccttgataaggttgcgagaagaactcctgggtttacaggtgctgat 220504
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 13 ctcacggagatggacggcttctccgg 38 ||||| |||||||||||||||||||| Sbjct: 112040 ctcaccgagatggacggcttctccgg 112065
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 tgctcacggagatggacggctt 32 |||||||||||||||||||||| Sbjct: 4405 tgctcacggagatggacggctt 4384
>gb|AE010377.1| Methanopyrus kandleri AV19 section 76 of 157 of the complete genome Length = 4406 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 9 gctgctcacggagatggacggcttc 33 ||||||| ||||||||||||||||| Sbjct: 3938 gctgctcgcggagatggacggcttc 3962
>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence Length = 98713 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 gcttgtggcttaccatgaggc 425 ||||||||||||||||||||| Sbjct: 55731 gcttgtggcttaccatgaggc 55711
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 tgctcgccgcgaccaacaggc 76 ||||||||||||||||||||| Sbjct: 145980 tgctcgccgcgaccaacaggc 146000
>gb|BC044464.1| Danio rerio nuclear VCP-like, mRNA (cDNA clone MGC:55732 IMAGE:3816242), complete cds Length = 2657 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgctcacggagatggacgg 29 ||||||||||||||||||||| Sbjct: 2057 gctgctcacggagatggacgg 2077
>ref|NM_213484.1| Danio rerio nuclear VCP-like (nvl), mRNA Length = 2657 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgctcacggagatggacgg 29 ||||||||||||||||||||| Sbjct: 2057 gctgctcacggagatggacgg 2077
>ref|XM_697576.1| PREDICTED: Danio rerio hypothetical protein LOC554702 (LOC554702), mRNA Length = 2640 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gctgctcacggagatggacgg 29 ||||||||||||||||||||| Sbjct: 2057 gctgctcacggagatggacgg 2077
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 415 taccatgaggctggacatgccctcgtcggtgccctgatgcc 455 ||||||||||| || |||||||| || || ||||||||||| Sbjct: 111477 taccatgaggcgggtcatgcccttgtgggcgccctgatgcc 111437
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 61 gccgcgaccaacaggccggatgtgcttgactccgcgcttctgcggccagggcggttcgat 120 |||||||||||| |||| || ||||| ||| | ||| | || ||||| ||||||||||| Sbjct: 2726406 gccgcgaccaaccggcctgacgtgctggaccctgcggtcctccggccggggcggttcgac 2726347 Query: 121 cggca 125 ||||| Sbjct: 2726346 cggca 2726342 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 9 gctgctcacggagatggacggcttc 33 ||||||||| ||||||||||||||| Sbjct: 147779 gctgctcaccgagatggacggcttc 147803
>ref|NM_115254.3| Arabidopsis thaliana binding / transporter AT3G53940 mRNA, complete cds Length = 1542 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tgagaagaagaatgcagttg 385 |||||||||||||||||||| Sbjct: 1089 tgagaagaagaatgcagttg 1108
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 79 gatgtgcttgactccgcgcttctgcggccagggcggttcgatcg 122 ||||||||||| || |||||| |||| |||||||| || ||||| Sbjct: 9289 gatgtgcttgattcggcgcttttgcgtccagggcgttttgatcg 9332
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 8.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 405 gcttgtggcttaccatgaggctggacatgccctcgtcggt 444 |||||| |||||||||||||| || |||||| | |||||| Sbjct: 181273 gcttgtagcttaccatgaggcgggccatgccatggtcggt 181312
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 ctgctcacggagatggacggcttc 33 |||||||| ||||||||||||||| Sbjct: 100442 ctgctcaccgagatggacggcttc 100465
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 aagcttgtggcttaccatga 422 |||||||||||||||||||| Sbjct: 301864 aagcttgtggcttaccatga 301883
>gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome 14, complete sequence Length = 210969 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 546 agtctggactgtacagcaggagct 569 |||||| ||||||||||||||||| Sbjct: 68432 agtctgcactgtacagcaggagct 68409
>gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, complete sequence Length = 225556 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ttgaggttcactccagagga 189 |||||||||||||||||||| Sbjct: 84075 ttgaggttcactccagagga 84094
>gb|BT011963.1| Arabidopsis thaliana At3g53940 mRNA sequence Length = 1095 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tgagaagaagaatgcagttg 385 |||||||||||||||||||| Sbjct: 881 tgagaagaagaatgcagttg 900
>ref|XM_842897.1| Leishmania major strain Friedlin ATPase (LMJ_0292) partial mRNA Length = 1971 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 ctgctcacggagatggacggcttc 33 |||||||| ||||||||||||||| Sbjct: 1552 ctgctcaccgagatggacggcttc 1575
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 atgaggctggacatgccctc 438 |||||||||||||||||||| Sbjct: 54117 atgaggctggacatgccctc 54136
>ref|XM_499951.1| Yarrowia lipolytica CLIB122, YALI0A10615g predicted mRNA Length = 2403 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 408 tgtggcttaccatgaggctggacatgcc 435 |||||| |||||||||||||| |||||| Sbjct: 1773 tgtggcctaccatgaggctggccatgcc 1800
>gb|AF259761.1| Ovis aries microsatellite MNS-89 sequence Length = 995 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 tgccctgatgcctgaatatg 463 |||||||||||||||||||| Sbjct: 798 tgccctgatgcctgaatatg 817
>gb|AE008912.1| Salmonella typhimurium LT2, section 216 of 220 of the complete genome Length = 20216 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gccctgatgcctgaatatga 464 |||||||||||||||||||| Sbjct: 4815 gccctgatgcctgaatatga 4796
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 602 ggcagggttgccgaggaggt 621 |||||||||||||||||||| Sbjct: 128866 ggcagggttgccgaggaggt 128885
>emb|AL627284.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 20/20 Length = 88037 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gccctgatgcctgaatatga 464 |||||||||||||||||||| Sbjct: 3877 gccctgatgcctgaatatga 3858
>emb|AL132960.2|ATF5K20 Arabidopsis thaliana DNA chromosome 3, BAC clone F5K20 Length = 119407 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 tgagaagaagaatgcagttg 385 |||||||||||||||||||| Sbjct: 73981 tgagaagaagaatgcagttg 73962
>gb|AF236051.1| California sea lion herpesvirus terminase gene, partial cds Length = 448 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gaagaggaagcttgtggctt 415 |||||||||||||||||||| Sbjct: 109 gaagaggaagcttgtggctt 90
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 85 cttgactccgcgcttctgcggccagggcggttcgatcggcaggt 128 |||||||||||| | |||||||| || || ||||| |||||||| Sbjct: 2168295 cttgactccgcgttgctgcggccgggccgcttcgaccggcaggt 2168338
>gb|AY093262.1| Arabidopsis thaliana putative protein (F5K20.24) mRNA, complete cds Length = 1169 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tgagaagaagaatgcagttg 385 |||||||||||||||||||| Sbjct: 884 tgagaagaagaatgcagttg 903
>gb|AY062478.1| Arabidopsis thaliana putative protein (F5K20.24) mRNA, complete cds Length = 1397 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tgagaagaagaatgcagttg 385 |||||||||||||||||||| Sbjct: 1089 tgagaagaagaatgcagttg 1108
>gb|AC008632.6|AC008632 Homo sapiens chromosome 5 clone CTB-164N12, complete sequence Length = 112687 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 agaaccaaatggctgtggca 595 |||||||||||||||||||| Sbjct: 59752 agaaccaaatggctgtggca 59771
>gb|AF193618.1|AF193618 California sea lion herpesvirus terminase gene, partial cds Length = 375 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gaagaggaagcttgtggctt 415 |||||||||||||||||||| Sbjct: 36 gaagaggaagcttgtggctt 17
>emb|BX822250.1|CNS0A70P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1400 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tgagaagaagaatgcagttg 385 |||||||||||||||||||| Sbjct: 1044 tgagaagaagaatgcagttg 1063
>emb|BX824565.1|CNS0A4VO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZE10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tgagaagaagaatgcagttg 385 |||||||||||||||||||| Sbjct: 1056 tgagaagaagaatgcagttg 1075
>gb|AC008663.6|AC008663 Homo sapiens chromosome 5 clone CTB-33O18, complete sequence Length = 142859 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 agaaccaaatggctgtggca 595 |||||||||||||||||||| Sbjct: 132413 agaaccaaatggctgtggca 132432
>gb|AC068279.6| Homo sapiens BAC clone RP11-153P14 from 2, complete sequence Length = 135351 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tgttgccaagatttccatca 487 |||||||||||||||||||| Sbjct: 6697 tgttgccaagatttccatca 6678
>gb|AE004548.1| Pseudomonas aeruginosa PAO1, section 109 of 529 of the complete genome Length = 10054 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tcatcgtgctcgccgcgacc 69 |||||||||||||||||||| Sbjct: 8703 tcatcgtgctcgccgcgacc 8722
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tggcgaaggatgtggacttt 216 |||||||||||||||||||| Sbjct: 1272758 tggcgaaggatgtggacttt 1272777
>ref|XM_345541.2| PREDICTED: Rattus norvegicus similar to Ubiquitin carboxyl-terminal hydrolase isozyme L3 (UCH-L3) (Ubiquitin thiolesterase L3) (LOC366382), mRNA Length = 687 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ttcagaacagaagaggaagc 406 |||||||||||||||||||| Sbjct: 199 ttcagaacagaagaggaagc 218
>gb|AC017002.4| Homo sapiens BAC clone RP11-68E19 from 2, complete sequence Length = 205662 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 tgttgccaagatttccatca 487 |||||||||||||||||||| Sbjct: 109069 tgttgccaagatttccatca 109088
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 101 tgcggccagggcggttcgatcggcaggt 128 |||||||||| ||||||||||| ||||| Sbjct: 697074 tgcggccaggacggttcgatcgccaggt 697101 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 409 gtggcttaccatgaggctggacatgccctcgtcggtgccctgatgcctgaatatga 464 |||||||||||||| ||||| || ||| | || ||||| |||||||||| ||||| Sbjct: 472337 gtggcttaccatgaagctggccacgccttggtgggtgctttgatgcctgattatga 472392
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 ctgctcacggagatggacggcttc 33 |||||| ||||||||||||||||| Sbjct: 2821080 ctgctctcggagatggacggcttc 2821103
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 gcgcttctgcggccagggcg 113 |||||||||||||||||||| Sbjct: 94710 gcgcttctgcggccagggcg 94729
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gccctgatgcctgaatatga 464 |||||||||||||||||||| Sbjct: 4707801 gccctgatgcctgaatatga 4707782
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gccctgatgcctgaatatga 464 |||||||||||||||||||| Sbjct: 4668541 gccctgatgcctgaatatga 4668522
>gb|AY627304.1| Haloferax volcanii DS2 proteasome-activating nucleotidase B (panB) gene, complete cds Length = 1239 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 ctgctcacggagatggacggcttc 33 |||||| ||||||||||||||||| Sbjct: 835 ctgctctcggagatggacggcttc 858
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 408 tgtggcttaccatgaggctggacatgcc 435 |||||| |||||||||||||| |||||| Sbjct: 1102899 tgtggcctaccatgaggctggccatgcc 1102926 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,972,087 Number of Sequences: 3902068 Number of extensions: 4972087 Number of successful extensions: 88588 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87902 Number of HSP's gapped (non-prelim): 659 length of query: 631 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 608 effective length of database: 17,143,297,704 effective search space: 10423125004032 effective search space used: 10423125004032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
