Clone Information

BLAST Search Result

Clone Name	bah62k07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloropl...	320	2e-87
2	PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloropl...	319	4e-87
3	PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloropl...	314	1e-85
4	PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloropl...	313	3e-85
5	PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloropl...	308	7e-84
6	PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chlor...	307	2e-83
7	PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplas...	306	2e-83
8	PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloropl...	306	2e-83
9	PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chlor...	300	1e-81
10	PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloropl...	226	4e-59
11	PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloropl...	223	4e-58
12	PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloropl...	219	5e-57
13	PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypep...	186	3e-47
14	PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypep...	173	3e-43
15	PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypep...	172	6e-43
16	PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypep...	172	6e-43
17	PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypep...	172	6e-43
18	PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypep...	169	5e-42
19	PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (3...	40	0.003
20	DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta...	31	2.8
21	RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Prote...	30	3.6
22	RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)	30	3.6
23	METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2....	30	4.7
24	CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES pro...	30	4.7
25	H1_EUPES (Q9M5W4) Histone H1	30	6.1
26	VG12_BPML5 (Q05328) Gene 12 protein (Gp12)	30	6.1
27	VG12_BPMD2 (O64205) Gene 12 protein (Gp12)	30	6.1
28	MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog	29	8.0

>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  320 bits (820), Expect = 2e-87
 Identities = 158/177 (89%), Positives = 165/177 (93%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           KAEGI KN PP FQKTKLMTRLTYTLDE+EGP EV  DGT+KFEEKDGIDYAAVTVQLPG
Sbjct: 143 KAEGINKNAPPEFQKTKLMTRLTYTLDEIEGPFEVAPDGTVKFEEKDGIDYAAVTVQLPG 202

Query: 212 GERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 391
           GERVPFLFTVKQLVATGKPESFSG +LVPSYRGSSFLDPKGRGGS GYDNAVALPAGGRG
Sbjct: 203 GERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRG 262

Query: 392 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKAPKDVK 562
           DEEEL KEN+K+ SSSTG ITLSVTKSKPETGEVIGVFES+QPSDTDL +KAPKDVK
Sbjct: 263 DEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVK 319

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>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  319 bits (817), Expect = 4e-87
 Identities = 157/177 (88%), Positives = 165/177 (93%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           KAE + KN PP FQKTKLMTRLTYTLDE+EGP EV +DGT+KFEEKDGIDYAAVTVQLPG
Sbjct: 146 KAESVNKNAPPDFQKTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPG 205

Query: 212 GERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 391
           GERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG
Sbjct: 206 GERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 265

Query: 392 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKAPKDVK 562
           DEEEL KENVKN SSSTG ITLSVT+SKPETGEVIGVFES+QPSDTDL AK PKDVK
Sbjct: 266 DEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVK 322

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>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  314 bits (805), Expect = 1e-85
 Identities = 155/177 (87%), Positives = 163/177 (92%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           KAEG+ KN  P FQKTKLMTRLTYTLDE+EGP EV  DGT+KFEEKDGIDYAAVTVQLPG
Sbjct: 143 KAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPG 202

Query: 212 GERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 391
           GERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG
Sbjct: 203 GERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 262

Query: 392 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKAPKDVK 562
           DEEEL KENVKN +S TG ITLSVT+SKPETGEVIGVFES+QPSDTDL AK PKDVK
Sbjct: 263 DEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVK 319

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>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 325

 Score =  313 bits (801), Expect = 3e-85
 Identities = 164/177 (92%), Positives = 165/177 (93%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           KAEGIQKNEPP FQKTKLMTRLTYTLDEMEGPLEV    TLKFEEKDGIDYAAVTVQLPG
Sbjct: 140 KAEGIQKNEPPRFQKTKLMTRLTYTLDEMEGPLEVRRRRTLKFEEKDGIDYAAVTVQLPG 199

Query: 212 GERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 391
           GERV FLFTVKQLVATGKPESF  PFLVPSYRGSSFLDPKGRGGSTGYDNA ALP GGRG
Sbjct: 200 GERVAFLFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRG 258

Query: 392 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKAPKDVK 562
           DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL  +APKDVK
Sbjct: 259 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL--EAPKDVK 313

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>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  308 bits (789), Expect = 7e-84
 Identities = 153/177 (86%), Positives = 161/177 (90%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           KAEGI KN  P FQ TKLMTRLTYTLDE+EGP EV +DGT+KFEEKDGIDYAAVTVQLPG
Sbjct: 144 KAEGISKNSGPDFQNTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPG 203

Query: 212 GERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 391
           GERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG
Sbjct: 204 GERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 263

Query: 392 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKAPKDVK 562
           DEEEL KEN KN +SS G ITLSVT SKPETGEVIGVF+S+QPSDTDL AK PKDVK
Sbjct: 264 DEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVK 320

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>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 331

 Score =  307 bits (786), Expect = 2e-83
 Identities = 149/177 (84%), Positives = 163/177 (92%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           KA+ + KN PP FQ TKLMTRLTYTLDE+EGP EVG+DG++KF+E+DGIDYAAVTVQLPG
Sbjct: 145 KADSVSKNAPPDFQNTKLMTRLTYTLDEIEGPFEVGSDGSVKFKEEDGIDYAAVTVQLPG 204

Query: 212 GERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 391
           GERVPFLFTVKQL A+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG
Sbjct: 205 GERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 264

Query: 392 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKAPKDVK 562
           DEEEL+KENVKN ++S G ITL +TKSKPETGEVIGVFES+QPSDTDL AK PKDVK
Sbjct: 265 DEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVK 321

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>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  306 bits (785), Expect = 2e-83
 Identities = 151/177 (85%), Positives = 164/177 (92%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           K+EG+ KN P AFQ TKLMTRLTYTLDE+EGP EV ADG++KFEEKDGIDYAAVTVQLPG
Sbjct: 142 KSEGVTKNTPLAFQNTKLMTRLTYTLDEIEGPFEVSADGSVKFEEKDGIDYAAVTVQLPG 201

Query: 212 GERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 391
           GERVPFLFT+KQLVA+GKP+SFSG FLVPSYRGSSFLDPKGRG STGYDNAVALPAGGRG
Sbjct: 202 GERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRG 261

Query: 392 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKAPKDVK 562
           DEEEL KEN K+A+SS G ITLSVT++KPETGEVIGVFES+QPSDTDL AKAPKDVK
Sbjct: 262 DEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVK 318

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>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 333

 Score =  306 bits (785), Expect = 2e-83
 Identities = 151/177 (85%), Positives = 160/177 (90%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           KAEG+ KN  P FQKTKLMTRLTYTLDE+EGP EV  DGT+KFEEKDGIDYAAVTVQLPG
Sbjct: 146 KAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPG 205

Query: 212 GERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 391
           GERVPFLFT+KQLVA+GKPESFS  FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG
Sbjct: 206 GERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 265

Query: 392 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKAPKDVK 562
           DEEEL KENVKN +S TG IT +VTKS P+TGEVIGVFES+QPSDTDL AK PKDVK
Sbjct: 266 DEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVK 322

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>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 332

 Score =  300 bits (769), Expect = 1e-81
 Identities = 146/177 (82%), Positives = 160/177 (90%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           KA+ + KN PP FQ TKLMTRLTYTLDE+EGP EV +DG++ F+E+DGIDYAAVTVQLPG
Sbjct: 146 KADSVSKNAPPEFQNTKLMTRLTYTLDEIEGPFEVASDGSVNFKEEDGIDYAAVTVQLPG 205

Query: 212 GERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 391
           GERVPFLFTVKQL A+GKP+SF+G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG
Sbjct: 206 GERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 265

Query: 392 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKAPKDVK 562
           DEEEL KENVKN ++S G ITL VTKSKPETGEVIGVFES+QPSDTDL AK PKDVK
Sbjct: 266 DEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVK 322

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>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 293

 Score =  226 bits (575), Expect = 4e-59
 Identities = 115/177 (64%), Positives = 132/177 (74%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           K E + K     F KTKLMTRLTYTLD M G L+VG+DG+ + +E+DGIDYAA TVQLPG
Sbjct: 108 KEESVFKGGETEFVKTKLMTRLTYTLDAMSGTLKVGSDGSAELKEEDGIDYAATTVQLPG 167

Query: 212 GERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 391
           GERV FLFT+KQ    G  ++  G F+VPSYRGSSFLDPKGRGGSTGYDNAVALPA  R 
Sbjct: 168 GERVAFLFTIKQFDGKGTLDNIKGDFVVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RA 225

Query: 392 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKAPKDVK 562
           D EEL KENVK+  +  G+   SV K    TGE+ GVFES+QPSDTDL AK PKD+K
Sbjct: 226 DAEELLKENVKSTKALKGSAVFSVAKVNTATGEIAGVFESIQPSDTDLGAKPPKDIK 282

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>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 291

 Score =  223 bits (567), Expect = 4e-58
 Identities = 116/177 (65%), Positives = 128/177 (72%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           K E   K     F KTKLMTRLTYTLD M G  +VG+DG+ + +E DGIDYAA TVQLPG
Sbjct: 107 KEESQFKGGETEFVKTKLMTRLTYTLDAMSGSFKVGSDGSAELKEDDGIDYAATTVQLPG 166

Query: 212 GERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRG 391
           GERV FLFT+KQ    G  +   G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPA  R 
Sbjct: 167 GERVAFLFTIKQFDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RA 224

Query: 392 DEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKAPKDVK 562
           D EEL KENVK   +  G+   SV K  P TGE+ GVFES+QPSDTDL AK PKD+K
Sbjct: 225 DAEELLKENVKITKALKGSAVFSVAKVDPVTGEIAGVFESIQPSDTDLGAKPPKDIK 281

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>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 338

 Score =  219 bits (557), Expect = 5e-57
 Identities = 108/172 (62%), Positives = 129/172 (75%)
 Frame = +2

Query: 47  QKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVP 226
           +K +   F++TKLMTRLTYTLD +   L VG DG+   +EKDG+DYAA TVQL GGERVP
Sbjct: 156 EKQQVTEFERTKLMTRLTYTLDAISADLNVGGDGSWTIQEKDGLDYAATTVQLAGGERVP 215

Query: 227 FLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL 406
           FLFT+K L+A G    F G F VPSYRG++FLDPKGRGG++GYD AVALPA   GD+EE 
Sbjct: 216 FLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVALPAS--GDDEEY 273

Query: 407 AKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKAPKDVK 562
           AKEN K+ ++S G I   V K   ETGE+ GVFES+QPSDTDL AK PKD+K
Sbjct: 274 AKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIK 325

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>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 273

 Score =  186 bits (473), Expect = 3e-47
 Identities = 98/185 (52%), Positives = 122/185 (65%), Gaps = 8/185 (4%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           K E   K +   F   KL+TR T T+D++ G L+   D +L F EKDG+D+ A+TVQLPG
Sbjct: 81  KEEPANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPG 140

Query: 212 GERVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAV 367
           GERVPFLFT+K LVA  +P          F G F VPSYRG++FLDPKGRG  +GYDNAV
Sbjct: 141 GERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAV 200

Query: 368 ALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKA 547
           ALPA  + D+E+L + NVK A    G I+L + K    +GE+ G FES QPSDTDL A  
Sbjct: 201 ALPA--QADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEIAGTFESEQPSDTDLGADE 258

Query: 548 PKDVK 562
           PK+VK
Sbjct: 259 PKEVK 263

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>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 275

 Score =  173 bits (439), Expect = 3e-43
 Identities = 95/185 (51%), Positives = 120/185 (64%), Gaps = 8/185 (4%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           K E + K +   +   KL+TR T +L+++ G + V  DG + F E+ GID+  VTVQLPG
Sbjct: 82  KEEPVNKRQEAEYVPGKLLTRYTTSLEQISGKITVDEDGVVTFYEEGGIDFQPVTVQLPG 141

Query: 212 GERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAV 367
           GE+VPF FT+K LV   +P          F G F VPSYRG++FLDPKGRG +TGYDNAV
Sbjct: 142 GEQVPFFFTIKNLVGKTEPGFSSINSSIDFEGDFRVPSYRGATFLDPKGRGLATGYDNAV 201

Query: 368 ALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKA 547
           ALPA    D+E+ A  NVK      G+I+L VTK    TGE+ GVF+S QPSDTDL AK 
Sbjct: 202 ALPA--TADKEDYA--NVKQTPIGKGSISLQVTKVDQATGEIAGVFDSEQPSDTDLGAKE 257

Query: 548 PKDVK 562
           P +VK
Sbjct: 258 PVEVK 262

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>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 274

 Score =  172 bits (436), Expect = 6e-43
 Identities = 92/185 (49%), Positives = 115/185 (62%), Gaps = 8/185 (4%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           K E + K +   + K K++TR T +L+++ G + VGADGTL F+EKDGID+  +TV LPG
Sbjct: 82  KEEPVNKRQKAEYVKGKVLTRQTTSLEQIRGSIAVGADGTLTFKEKDGIDFQPITVLLPG 141

Query: 212 GERVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAV 367
           GE VPF FTVK    T +P          F G F VPSYRG+ FLDPK RG  TGYDNAV
Sbjct: 142 GEEVPFFFTVKNFTGTTEPGFTSINSSTDFVGDFNVPSYRGAGFLDPKARGLYTGYDNAV 201

Query: 368 ALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKA 547
           ALP+       +  + N K      G ++L VT+    TGE+ G+FES QPSDTDL AK 
Sbjct: 202 ALPSAA-----DKFRTNKKETPLGKGTLSLQVTQVDGSTGEIAGIFESEQPSDTDLGAKE 256

Query: 548 PKDVK 562
           P DVK
Sbjct: 257 PLDVK 261

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>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score =  172 bits (436), Expect = 6e-43
 Identities = 94/185 (50%), Positives = 123/185 (66%), Gaps = 8/185 (4%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           K E   K +   F  TKL+TR T +LD+++G L+V +DG+L F E+DGID+  VTVQ+ G
Sbjct: 79  KEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAG 138

Query: 212 GERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAV 367
           GER+P LFTVK LVA+ +P          F G F VPSYR ++FLDPKGRG ++GYD+A+
Sbjct: 139 GERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAI 198

Query: 368 ALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKA 547
           ALP   +  EEELA+ NVK  S + G I+L+V K    TGE+ G FES Q SD D+ A  
Sbjct: 199 ALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHE 255

Query: 548 PKDVK 562
           P +VK
Sbjct: 256 PHEVK 260

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>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score =  172 bits (436), Expect = 6e-43
 Identities = 94/185 (50%), Positives = 123/185 (66%), Gaps = 8/185 (4%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           K E   K +   F  TKL+TR T +LD+++G L+V +DG+L F E+DGID+  VTVQ+ G
Sbjct: 79  KEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAG 138

Query: 212 GERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAV 367
           GER+P LFTVK LVA+ +P          F G F VPSYR ++FLDPKGRG ++GYD+A+
Sbjct: 139 GERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAI 198

Query: 368 ALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKA 547
           ALP   +  EEELA+ NVK  S + G I+L+V K    TGE+ G FES Q SD D+ A  
Sbjct: 199 ALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHE 255

Query: 548 PKDVK 562
           P +VK
Sbjct: 256 PHEVK 260

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>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 277

 Score =  169 bits (428), Expect = 5e-42
 Identities = 95/185 (51%), Positives = 122/185 (65%), Gaps = 8/185 (4%)
 Frame = +2

Query: 32  KAEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPG 211
           K E   K +   F   K++TR T +LD++ G L + ADGT+ F EK GID+ A+TV LPG
Sbjct: 81  KEEPGNKRQKAEFVPGKVLTRYTSSLDQVYGDLALKADGTVSFTEKGGIDFQAITVLLPG 140

Query: 212 GERVPFLFTVKQLVA-TGKPES-------FSGPFLVPSYRGSSFLDPKGRGGSTGYDNAV 367
           GE VPFLFTVK LVA T +P +         G + VPSYR S+FLDPK RG +TGY++AV
Sbjct: 141 GEEVPFLFTVKGLVASTSEPATSINTSTDLRGGYRVPSYRTSNFLDPKARGLTTGYESAV 200

Query: 368 ALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKA 547
           A+P+   GD E+L KENVK   +  G I+L+V+K    TGEV GVF ++QPSDTD+  K 
Sbjct: 201 AIPSA--GDAEDLTKENVKRFVTGQGEISLAVSKVDGATGEVAGVFTAIQPSDTDMGGKE 258

Query: 548 PKDVK 562
             DVK
Sbjct: 259 AVDVK 263

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>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit|
           of oxygen evolving system of photosystem II) (33 kDa
           thylakoid membrane protein) (Fragments)
          Length = 26

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2

Query: 329 KGRGGSTGYDNAVALPAGGR 388
           + +GGSTGYDNAVALPAGGR
Sbjct: 7   QSKGGSTGYDNAVALPAGGR 26

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>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter|
           protein containing PH domain, PTB domain and leucine
           zipper motif 2)
          Length = 662

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 383 GRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 517
           G+  E   + +N+KN+     NI    T S PET E+I     +Q
Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449

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>RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B)|
          Length = 536

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +2

Query: 287 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 451
           F++   R  S L   G G + G   A  L AGGRGD     +E+   E  KNA  +   I
Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488

Query: 452 TLSVTKSKP 478
           T  + +  P
Sbjct: 489 TGHLEEPMP 497

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>RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)|
          Length = 560

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +2

Query: 287 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 451
           F++   R  S L   G G + G   A  L AGGRGD     +E+   E  KNA  +   I
Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488

Query: 452 TLSVTKSKP 478
           T  + +  P
Sbjct: 489 TGHLEEPMP 497

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>METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase) (Fragment)
          Length = 319

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +2

Query: 233 FTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYD 358
           F  + + A   PES +G  +VP Y+ S++   +G G  TGY+
Sbjct: 5   FATRAIHAGQDPESVTGAVIVPIYQTSTYAQ-RGVGDHTGYE 45

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>CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES protein)|
          Length = 94

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 21/53 (39%), Positives = 26/53 (49%)
 Frame = +2

Query: 404 LAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLXAKAPKDVK 562
           +AKE  K      G +  SV K KP+TGEVI V E       +   K P +VK
Sbjct: 13  VAKEEEKTVG---GIVLASVAKEKPQTGEVIAVGEG---RVLENGTKVPMEVK 59

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>H1_EUPES (Q9M5W4) Histone H1|
          Length = 229

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 200 QLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGS 313
           QLP   R   LF +K+LVA+GK       F +PS R +
Sbjct: 86  QLPSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSARAA 123

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>VG12_BPML5 (Q05328) Gene 12 protein (Gp12)|
          Length = 254

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 13 PTSFTVQGRGHPEERATGLPEDQAHD 90
          P  FTV G G P+    GLP D A D
Sbjct: 4  PWLFTVHGTGQPDPLGPGLPADTARD 29

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>VG12_BPMD2 (O64205) Gene 12 protein (Gp12)|
          Length = 254

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 13 PTSFTVQGRGHPEERATGLPEDQAHD 90
          P  FTV G G P+    GLP D A D
Sbjct: 4  PWLFTVHGTGQPDPLGPGLPADTARD 29

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>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog|
          Length = 241

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 22/54 (40%), Positives = 26/54 (48%)
 Frame = +2

Query: 365 VALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 526
           V   A G   EEE A+   K      G + L  T SKP+  EVIG FES   +D
Sbjct: 72  VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPD--EVIGYFESFVQND 123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,942,583
Number of Sequences: 219361
Number of extensions: 907220
Number of successful extensions: 4092
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4074
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result