ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62k06 |
|---|---|
| Clone Library Name | barley_pub |
>RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 Score = 323 bits (827), Expect = 4e-88 Identities = 155/174 (89%), Positives = 157/174 (90%) Frame = +2 Query: 29 MAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFET 208 MAPAVMASSATTVAPFQGLKSTAGLP RIRCMQVWPIEGIKKFET Sbjct: 1 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSRGSLGSVSNGGRIRCMQVWPIEGIKKFET 60 Query: 209 LSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMF 388 LSYLPPL+TEAL KQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMF Sbjct: 61 LSYLPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMF 120 Query: 389 GCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCEESGKA 550 GCTDATQVLNEVEEVKKEYPDAYVR+IGFDNLRQVQCVSFIAFRPPGCEESGKA Sbjct: 121 GCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRPPGCEESGKA 174
>RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 Score = 320 bits (821), Expect = 2e-87 Identities = 155/175 (88%), Positives = 158/175 (90%), Gaps = 1/175 (0%) Frame = +2 Query: 29 MAPAVMASSATTVAPFQGLKSTAGLPXX-XXXXXXXXXXXXXXRIRCMQVWPIEGIKKFE 205 MAPAVMASSATTVAPFQGLKSTAGLP RIRCMQVWPIEGIKKFE Sbjct: 1 MAPAVMASSATTVAPFQGLKSTAGLPISCRSGSTGLSSVSNGGRIRCMQVWPIEGIKKFE 60 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 385 TLSYLPPL+TEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM Sbjct: 61 TLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 120 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCEESGKA 550 FGCTDATQVLNEVEEVKKEYPDAYVR+IGFDN+RQVQCVSFIAFRPPGCEESGKA Sbjct: 121 FGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRPPGCEESGKA 175
>RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 Score = 319 bits (817), Expect = 5e-87 Identities = 150/174 (86%), Positives = 157/174 (90%) Frame = +2 Query: 29 MAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFET 208 MAP VMASSAT+VAPFQGLKSTAGLP RIRCMQVWPIEGIKKFET Sbjct: 1 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFET 60 Query: 209 LSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMF 388 LSYLPPL+TEALLKQVDYLIRSKWVPCLEFSKVGF+FREHN+SPGYYDGRYWTMWKLPMF Sbjct: 61 LSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMF 120 Query: 389 GCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCEESGKA 550 GCTDATQVLNEVEEVKKEYPDAYVRIIGFDN+RQVQCVSFIAF+PPGC+ESGKA Sbjct: 121 GCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCQESGKA 174
>RBS_AEGTA (Q38793) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 175 Score = 287 bits (734), Expect = 2e-77 Identities = 139/175 (79%), Positives = 146/175 (83%), Gaps = 1/175 (0%) Frame = +2 Query: 29 MAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFE 205 MAP VMASSAT+VAPFQGLKSTAGLP RIRCMQVWPIEGIKKFE Sbjct: 1 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFE 60 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 385 TLSYLPPL+TE LLKQVDYLIRSKWVPCLEF KVGF+FREHN SPGYYDGRYWTMWKLPM Sbjct: 61 TLSYLPPLSTEGLLKQVDYLIRSKWVPCLEFRKVGFIFREHNVSPGYYDGRYWTMWKLPM 120 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCEESGKA 550 FGC TQV+ EVEEV+KEYPD Y RIIGFDN+RQVQ VSFIA +PPGCEESGKA Sbjct: 121 FGCPAPTQVIPEVEEVRKEYPDPYCRIIGFDNMRQVQSVSFIASKPPGCEESGKA 175
>RBS3_ORYSA (P18567) Ribulose bisphosphate carboxylase small chain C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit C) Length = 175 Score = 286 bits (731), Expect = 5e-77 Identities = 135/173 (78%), Positives = 149/173 (86%), Gaps = 1/173 (0%) Frame = +2 Query: 29 MAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFE 205 MAP+VMASSATTVAPFQGLKSTAG+P RIRCMQVWPIEGIKKFE Sbjct: 1 MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFE 60 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 385 TLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGYYDGRYWTMWKLPM Sbjct: 61 TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCEESG 544 FGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA++PPGCEESG Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESG 173
>RBS2_ORYSA (P18566) Ribulose bisphosphate carboxylase small chain A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit A) Length = 175 Score = 279 bits (713), Expect = 6e-75 Identities = 132/173 (76%), Positives = 147/173 (84%), Gaps = 1/173 (0%) Frame = +2 Query: 29 MAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFE 205 MAP VMASSAT+VAPFQGLKSTAGLP RI+ MQVWPIEGIKKFE Sbjct: 1 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNSGFGNVSNGGRIKFMQVWPIEGIKKFE 60 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 385 TLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGYYDGRYWTMWKLPM Sbjct: 61 TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM 120 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCEESG 544 FGCTDATQVL E+EE KK YPDA++RIIGFDN+RQVQ +SFIA++PPGCEESG Sbjct: 121 FGCTDATQVLKELEEAKKAYPDAFIRIIGFDNVRQVQLISFIAYKPPGCEESG 173
>RBS_MAIZE (P05348) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 170 Score = 249 bits (636), Expect = 5e-66 Identities = 117/170 (68%), Positives = 135/170 (79%), Gaps = 1/170 (0%) Frame = +2 Query: 29 MAPAVM-ASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFE 205 MAP VM ASSAT VAPFQGLKSTA LP RIRCMQVWP G KKFE Sbjct: 1 MAPTVMMASSATAVAPFQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFE 60 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 385 TLSYLPPL+T+ LLKQVDYL+R+ W+PCLEFSKVGFV+RE+++SP YYDGRYWTMWKLPM Sbjct: 61 TLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPM 120 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCE 535 FGC DATQV E++E K YPDA+ R+IGFDN++Q QCVSFIA++PPG + Sbjct: 121 FGCNDATQVYKELQEAIKSYPDAFHRVIGFDNIKQTQCVSFIAYKPPGSD 170
>RBS1_ORYSA (P05347) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 172 Score = 246 bits (627), Expect = 6e-65 Identities = 123/172 (71%), Positives = 136/172 (79%) Frame = +2 Query: 29 MAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFET 208 MAP+VMASSATTVAPFQG S RIRCMQVWPIEGIKKFET Sbjct: 1 MAPSVMASSATTVAPFQG-SSPPPACRRPPSELQLRQRQHGGRIRCMQVWPIEGIKKFET 59 Query: 209 LSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMF 388 LSYLPPLT E LLKQ++YL + VPCLEFSKVGFV+RE++ SPGYYDGRYWTMWKLPMF Sbjct: 60 LSYLPPLTVEDLLKQIEYLAPFQVVPCLEFSKVGFVYRENHKSPGYYDGRYWTMWKLPMF 119 Query: 389 GCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCEESG 544 GCTDATQV+ E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA+ PGCEESG Sbjct: 120 GCTDATQVVKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYN-PGCEESG 170
>RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512| (EC 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 113 Score = 236 bits (601), Expect = 6e-62 Identities = 106/113 (93%), Positives = 113/113 (100%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 +YLPPL+TEALLKQVDYLIRSKWVPCLEFSKVGF+FREHN+SPGYYDGRYWTMWKLPMFG Sbjct: 1 AYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 60 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCEESGKA 550 CTDATQV+NEVEEVKKEYPDAYVRIIGFDN+RQVQCVSFIAF+PPGCEESGKA Sbjct: 61 CTDATQVINEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESGKA 113
>RBS2_SPIOL (Q43832) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 180 Score = 230 bits (586), Expect = 3e-60 Identities = 103/161 (63%), Positives = 127/161 (78%), Gaps = 1/161 (0%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFETLSYLPPL 229 + A+ VAPF GLKST G P R++CM+VWP + +K++ETLSYLPPL Sbjct: 19 AQASMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPL 78 Query: 230 TTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDAT 406 TT+ L +QVDYL+ +KWVPCLEF + GFV+REH++SPGYYDGRYWTMWKLPMFGCTD Sbjct: 79 TTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPA 138 Query: 407 QVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 QVLNE+EE KKEYP+A++RIIGFD+ RQVQCVSFIA++P G Sbjct: 139 QVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPAG 179
>RBS_SACHY (Q41373) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 168 Score = 228 bits (582), Expect = 9e-60 Identities = 110/169 (65%), Positives = 126/169 (74%) Frame = +2 Query: 29 MAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFET 208 MA VMASSAT APFQGLKSTA LP RIRCMQVWP G KKFET Sbjct: 1 MALTVMASSATAAAPFQGLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFET 60 Query: 209 LSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMF 388 LSYLPPLT E LLKQVDYL+R+ WVPCLEFSK GFV+RE+++SP YYDGRYWTMWKLPMF Sbjct: 61 LSYLPPLTQEQLLKQVDYLLRNNWVPCLEFSKEGFVYRENSTSPCYYDGRYWTMWKLPMF 120 Query: 389 GCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCE 535 GCTDA+QV E++E YP+ I+GFDN+RQ Q ++FIA++P G E Sbjct: 121 GCTDASQVYKELQEAIASYPELRA-ILGFDNIRQTQWLTFIAYKPAGSE 168
>RBS_MUSAC (O24045) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 226 bits (576), Expect = 5e-59 Identities = 108/179 (60%), Positives = 129/179 (72%), Gaps = 12/179 (6%) Frame = +2 Query: 29 MAPAVMASSATT-----------VAPFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQ 172 M ++M SSA T VAPF GLKS + P R++CM+ Sbjct: 1 MVSSMMVSSAATFTRASPAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMK 60 Query: 173 VWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYD 352 VWPIEG+KKFETLSYLP + EAL+KQ++YL+RSKW+PCLEF GFV+RE++ SPGYYD Sbjct: 61 VWPIEGVKKFETLSYLPTMKDEALVKQIEYLLRSKWIPCLEFCPKGFVWRENHRSPGYYD 120 Query: 353 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 GRYWTMWKLPMFGCTDA QV EVEE KKEYP A++RIIGFDN RQVQC+SFIA++P G Sbjct: 121 GRYWTMWKLPMFGCTDAVQVAKEVEECKKEYPHAFIRIIGFDNNRQVQCISFIAYKPTG 179
>RBS4_MESCR (Q08184) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 183 Score = 226 bits (575), Expect = 6e-59 Identities = 103/168 (61%), Positives = 126/168 (75%), Gaps = 1/168 (0%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKF 202 +TMA A + A VAPF GLKS + P R++CMQVWP G+KKF Sbjct: 11 TTMAAATTTAQANMVAPFNGLKSISAFPVTRKNNDITSVASNGGRVQCMQVWPPLGMKKF 70 Query: 203 ETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKV-GFVFREHNSSPGYYDGRYWTMWKL 379 ETLSYLPPL+ E+LLK+V YL+ + WVPCLEF GFV+REH ++PGYYDGRYWTMWKL Sbjct: 71 ETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKL 130 Query: 380 PMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 PMFGCTD +QV+ E+EE KK YP+A++RIIGFDN+RQVQCVSFIA++P Sbjct: 131 PMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 178
>RBS6_LEMGI (P19312) Ribulose bisphosphate carboxylase small chain SSU5B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU5B) Length = 177 Score = 226 bits (575), Expect = 6e-59 Identities = 107/176 (60%), Positives = 130/176 (73%), Gaps = 11/176 (6%) Frame = +2 Query: 29 MAPAVMASSATT----------VAPFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQV 175 MA ++MAS+A VAPF GL+S+ P R+ CMQV Sbjct: 1 MASSMMASTAAVARVGPAQTNMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDG 355 WP EG+KKFETLSYLPPL+ E L K+VDYL+R+ WVPC+EFSK GFV+RE+++SPGYYDG Sbjct: 61 WPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDG 120 Query: 356 RYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 RYWTMWKLPMFGCTDA+QV+ EVEE KK YP+ +VRIIGFDN RQVQC+SFIA++P Sbjct: 121 RYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
>RBS5_LEMGI (P19311) Ribulose bisphosphate carboxylase small chain SSU5A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU5A) Length = 177 Score = 226 bits (575), Expect = 6e-59 Identities = 107/176 (60%), Positives = 130/176 (73%), Gaps = 11/176 (6%) Frame = +2 Query: 29 MAPAVMASSATT----------VAPFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQV 175 MA ++MAS+A VAPF GL+S+ P R+ CMQV Sbjct: 1 MASSMMASTAAVARAGPAQSSMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDG 355 WP EG+KKFETLSYLPPL+ E L K+VDYL+R+ WVPC+EFSK GFV+RE+++SPGYYDG Sbjct: 61 WPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDG 120 Query: 356 RYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 RYWTMWKLPMFGCTDA+QV+ EVEE KK YP+ +VRIIGFDN RQVQC+SFIA++P Sbjct: 121 RYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
>RBS1A_ARATH (P10795) Ribulose bisphosphate carboxylase small chain 1A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1A) Length = 180 Score = 225 bits (573), Expect = 1e-58 Identities = 108/173 (62%), Positives = 128/173 (73%), Gaps = 5/173 (2%) Frame = +2 Query: 23 STMAPAVMASS---ATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEG 190 S ++ A M +S AT VAPF GLKS+A P R+ CMQVWP G Sbjct: 4 SMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIG 63 Query: 191 IKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWT 367 KKFETLSYLP LT L K+VDYLIR+KW+PC+EF + GFV+REH +SPGYYDGRYWT Sbjct: 64 KKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWT 123 Query: 368 MWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 526 MWKLP+FGCTD+ QVL EVEE KKEYP+A++RIIGFDN RQVQC+SFIA++PP Sbjct: 124 MWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPP 176
>RBS_PYRPY (P24007) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 225 bits (573), Expect = 1e-58 Identities = 100/161 (62%), Positives = 125/161 (77%), Gaps = 1/161 (0%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFETLSYLPPL 229 + A VAPF GLKS++ P R++CMQVWP G+KKFETLSYLPPL Sbjct: 22 AQARMVAPFNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPL 81 Query: 230 TTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDAT 406 ++E+L K+VDYL+R WVPCLEF + GFV+RE++ SPGYYDGRYWTMWKLPMFGCTD++ Sbjct: 82 SSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSS 141 Query: 407 QVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 QVL E+EE KK YP +++RIIGFDN+RQVQC+SFIA++P G Sbjct: 142 QVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
>RBS2_LEMGI (P19308) Ribulose bisphosphate carboxylase small chain SSU26,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU26) Length = 177 Score = 224 bits (572), Expect = 1e-58 Identities = 106/176 (60%), Positives = 130/176 (73%), Gaps = 11/176 (6%) Frame = +2 Query: 29 MAPAVMASSATT----------VAPFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQV 175 MA ++MAS+A VAPF GL+S+ P ++ CMQV Sbjct: 1 MASSMMASTAAVARAGPAQSNMVAPFNGLRSSVAFPATRKANKNLSTLPSNGGKVSCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDG 355 WP EG+KKFETLSYLPPL+ E L K+VDYL+R+ WVPC+EFSK GFV+RE+++SPGYYDG Sbjct: 61 WPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDG 120 Query: 356 RYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 RYWTMWKLPMFGCTDA+QV+ EVEE KK YP+ +VRIIGFDN RQVQC+SFIA++P Sbjct: 121 RYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
>RBS_MALSP (Q02980) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 224 bits (571), Expect = 2e-58 Identities = 101/161 (62%), Positives = 125/161 (77%), Gaps = 1/161 (0%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFETLSYLPPL 229 + A VAPF GLKS++ P R++CMQVWP G+KKFETLSYLPPL Sbjct: 22 AQARMVAPFTGLKSSSASPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPL 81 Query: 230 TTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDAT 406 +TE+L K+VDYL+R WVPCLEF + GFV+RE++ SPGYYDGRYWTMWKLPMFGCTD++ Sbjct: 82 STESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSS 141 Query: 407 QVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 QVL E+EE KK YP +++RIIGFDN+RQVQC+SFIA++P G Sbjct: 142 QVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
>RBS3_MESCR (Q08183) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 183 Score = 223 bits (569), Expect = 3e-58 Identities = 101/168 (60%), Positives = 125/168 (74%), Gaps = 1/168 (0%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKF 202 +TMA A + A VAPF GLKS + P R++CMQVWP G KKF Sbjct: 11 TTMAAATTTAQANMVAPFNGLKSVSAFPVTRKNNDITSVASNGGRVQCMQVWPPLGKKKF 70 Query: 203 ETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKV-GFVFREHNSSPGYYDGRYWTMWKL 379 ETLSYLPPL+ E+L+K+V YL+ + WVPCLEF GFV+REH ++PGYYDGRYWTMWKL Sbjct: 71 ETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKL 130 Query: 380 PMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 PMFGCTD +QV+ E+EE KK YP+A++RIIGFDN+RQVQC+SFIA++P Sbjct: 131 PMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKP 178
>RBS_ZANAE (O48550) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 222 bits (566), Expect = 7e-58 Identities = 104/177 (58%), Positives = 126/177 (71%), Gaps = 10/177 (5%) Frame = +2 Query: 29 MAPAVMASSATT----------VAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVW 178 MA ++M S+A V PF GL S+A P R+RCMQVW Sbjct: 1 MASSMMVSTAAVSRTSPAQSNMVVPFAGLHSSAAFPVTRKFADSSKLPSNGLRVRCMQVW 60 Query: 179 PIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGR 358 P EG KKFETLSYLPPLT E L ++VDYLIR+ W+PC+EF KVGFV+RE+++SPGYYDGR Sbjct: 61 PPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGR 120 Query: 359 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 YWTMWKLPMFGCTD++QVL EV+E K YPD + RIIGFDN RQVQC+SF+ ++P G Sbjct: 121 YWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKPEG 177
>RBSC_SOLTU (P26577) Ribulose bisphosphate carboxylase small chain 2C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2C) Length = 180 Score = 221 bits (563), Expect = 1e-57 Identities = 109/179 (60%), Positives = 131/179 (73%), Gaps = 12/179 (6%) Frame = +2 Query: 29 MAPAVMASSATT----------VAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQV 175 MA +VM+S+A VAPF GLKSTA P R+RCMQV Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYD 352 WP +KK+ETLSYLP L+ E LLK+V+YL+++ WVPCLEF ++ GFV+RE+N SPGYYD Sbjct: 61 WPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYD 120 Query: 353 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 GRYWTMWKLPMFGCTDATQVL EVEE KK YP A++RIIGFDN+RQVQC+SFIA++P G Sbjct: 121 GRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
>RBS_GLYTA (Q42823) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 221 bits (562), Expect = 2e-57 Identities = 102/169 (60%), Positives = 122/169 (72%), Gaps = 1/169 (0%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKF 202 S V + A TVAPF GLKS AG P R++CMQVWP G KKF Sbjct: 8 SPAVTTVNRAGAGTVAPFTGLKSMAGFPTRKTNNDIASIASNGGRVQCMQVWPTTGKKKF 67 Query: 203 ETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKL 379 ETLSYLP L L K+V+YL+R W+PCLEF + GFV+REH+ SPGYYDGRYWTMWKL Sbjct: 68 ETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHHRSPGYYDGRYWTMWKL 127 Query: 380 PMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 526 PMFGCTDA+QVL E++E K YP+A++RIIGFDN+RQVQC+SFIA++PP Sbjct: 128 PMFGCTDASQVLKELQEAKTAYPNAFIRIIGFDNVRQVQCISFIAYKPP 176
>RBS4_LEMGI (P19310) Ribulose bisphosphate carboxylase small chain SSU40B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU40B) Length = 177 Score = 221 bits (562), Expect = 2e-57 Identities = 105/176 (59%), Positives = 128/176 (72%), Gaps = 11/176 (6%) Frame = +2 Query: 29 MAPAVMASSATTVA----------PFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQV 175 MA ++MAS+A VA PF +S+ P R+ CMQV Sbjct: 1 MASSMMASTAAAVARAGPAQTNMVPFNACRSSVPFPATRKANNDLSTLPSNGGRVSCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDG 355 WP EG+KKFETLSYLPPL+ E L K+VDYL+R+ WVPC+EFSK GFV+RE+++SPGYYDG Sbjct: 61 WPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDG 120 Query: 356 RYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 RYWTMWKLPMFGCTDA+QV+ EVEE KK YP+ +VRIIGFDN RQVQC+SFIA++P Sbjct: 121 RYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
>RBS1_FRIAG (O24634) Ribulose bisphosphate carboxylase small chain 1/4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1/4) Length = 179 Score = 220 bits (561), Expect = 3e-57 Identities = 106/170 (62%), Positives = 127/170 (74%), Gaps = 3/170 (1%) Frame = +2 Query: 23 STMAPAVMAS--SATTVAPFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQVWPIEGI 193 S++A A A+ A+ VAPF GLKST+ P R++CM+VWPI G+ Sbjct: 9 SSVATAACAAPAQASMVAPFVGLKSTSAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGL 68 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 KKFETLSYLP L+ E+LLKQ++YLIR+ WVPCLEFS GFV R++N SPGYYDGRYWTMW Sbjct: 69 KKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMW 128 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 KLPMFGCTDA QV+ E E KKEYP A++R+IGFDN+RQVQCVSFI RP Sbjct: 129 KLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVERP 178
>RBS3_LEMGI (P19309) Ribulose bisphosphate carboxylase small chain SSU40A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU40A) Length = 177 Score = 220 bits (561), Expect = 3e-57 Identities = 105/176 (59%), Positives = 128/176 (72%), Gaps = 11/176 (6%) Frame = +2 Query: 29 MAPAVMASSATTVA----------PFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQV 175 MA ++MAS+A VA PF +S+ P R+ CMQV Sbjct: 1 MASSMMASTAAAVARAGPAQSSMVPFNACRSSVPFPATRKANNNLSTLPGNGGRVSCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDG 355 WP EG+KKFETLSYLPPL+ E L K+VDYL+R+ WVPC+EFSK GFV+RE+++SPGYYDG Sbjct: 61 WPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDG 120 Query: 356 RYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 RYWTMWKLPMFGCTDA+QV+ EVEE KK YP+ +VRIIGFDN RQVQC+SFIA++P Sbjct: 121 RYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
>RBS1_LEMGI (P00872) Ribulose bisphosphate carboxylase small chain SSU1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU1) Length = 173 Score = 220 bits (561), Expect = 3e-57 Identities = 104/169 (61%), Positives = 124/169 (73%), Gaps = 2/169 (1%) Frame = +2 Query: 23 STMAPA-VMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQVWPIEGIK 196 ST A A V + V F G +S+ P R+ CMQVWP EG+K Sbjct: 4 STAAVARVRPAQTNMVGAFNGCRSSVAFPATRKANNDLSTLPSSGGRVSCMQVWPPEGLK 63 Query: 197 KFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWK 376 KFETLSYLPPL+ E L K+VDYL+R+ WVPC+EFSK GFV+RE+N+SPGYYDGRYWTMWK Sbjct: 64 KFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENNASPGYYDGRYWTMWK 123 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 LPMFGCTDA+QV+ EVEE KK YP+ +VRIIGFDN RQVQC+SFIA++P Sbjct: 124 LPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 172
>RBS_LACSA (Q40250) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 220 bits (560), Expect = 3e-57 Identities = 99/163 (60%), Positives = 124/163 (76%), Gaps = 2/163 (1%) Frame = +2 Query: 47 ASSATTVAPFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQVWPIEGIKKFETLSYLP 223 ++ A+ APF GLKS P R++CM+VWP G+KK+ETLSYLP Sbjct: 17 STQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLP 76 Query: 224 PLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTD 400 PL+ EAL K++DYLIR+KW+PCLEF + GFV+REH+ SPGYYDGRYWTMWKLPMFGCTD Sbjct: 77 PLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTD 136 Query: 401 ATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 + QV+ EV E KKEYP+A++R+IGFDN+RQVQC+SFI +PPG Sbjct: 137 SAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKPPG 179
>RBS2B_ARATH (P10797) Ribulose bisphosphate carboxylase small chain 2B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2B) Length = 181 Score = 219 bits (559), Expect = 4e-57 Identities = 103/176 (58%), Positives = 127/176 (72%), Gaps = 2/176 (1%) Frame = +2 Query: 20 YSTMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIK 196 +S+ A + AT VAPF GLKS+A P R+ CM+VWP G K Sbjct: 6 FSSTAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKK 65 Query: 197 KFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMW 373 KFETLSYLP L+ L K+VDYL+R+KW+PC+EF + GFV+REH ++PGYYDGRYWTMW Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMW 125 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCEES 541 KLP+FGCTD+ QVL EVEE KKEYP A++RIIGFDN RQVQC+SFIA++PP E+ Sbjct: 126 KLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTEA 181
>RBSB_SOLTU (P26576) Ribulose bisphosphate carboxylase small chain 2B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2B) Length = 180 Score = 219 bits (559), Expect = 4e-57 Identities = 104/171 (60%), Positives = 127/171 (74%), Gaps = 2/171 (1%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKK 199 + +A + A+ V PF GLKSTA P R+RCMQVWP +KK Sbjct: 9 AAVATRANGAQASMVGPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKK 68 Query: 200 FETLSYLPPLTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWK 376 +ETLSYLP L+ E LLK+V+YL+++ WVPCLEF ++ GFV+RE+N SPGYYDGRYWTMWK Sbjct: 69 YETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWK 128 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 LPMFGCTDATQVL EVEE KK YP A++RIIGFDN+RQVQC+SFIA++P G Sbjct: 129 LPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
>RBSA_SOLTU (P26575) Ribulose bisphosphate carboxylase small chain 2A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2A) Length = 180 Score = 219 bits (558), Expect = 6e-57 Identities = 108/179 (60%), Positives = 130/179 (72%), Gaps = 12/179 (6%) Frame = +2 Query: 29 MAPAVMASSATT----------VAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQV 175 MA +VM+S+A VAPF GLKS A P R+RCMQV Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVRCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYD 352 WP +KK+ETLSYLP L+ E LLK+V+YL+++ WVPCLEF ++ GFV+RE+N SPGYYD Sbjct: 61 WPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYD 120 Query: 353 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 GRYWTMWKLPMFGCTDATQVL EVEE KK YP A++RIIGFDN+RQVQC+SFIA++P G Sbjct: 121 GRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
>RBS5_MESCR (Q08185) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 182 Score = 219 bits (558), Expect = 6e-57 Identities = 102/168 (60%), Positives = 125/168 (74%), Gaps = 1/168 (0%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKF 202 +TMA A + A VAPF GLKS + P R++CM VWP G+KKF Sbjct: 11 TTMAAATTTAQANMVAPFNGLKSISAFPVTRKNNDITSVASNGGRVQCM-VWPPLGMKKF 69 Query: 203 ETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKV-GFVFREHNSSPGYYDGRYWTMWKL 379 ETLSYLPPL+ E+LLK+V YL+ + WVPCLEF GFV+REH ++PGYYDGRYWTMWKL Sbjct: 70 ETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKL 129 Query: 380 PMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 PMFGCTD +QV+ E+EE KK YP+A++RIIGFDN+RQVQCVSFIA++P Sbjct: 130 PMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 177
>RBS1B_ARATH (P10796) Ribulose bisphosphate carboxylase small chain 1B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1B) Length = 181 Score = 219 bits (557), Expect = 7e-57 Identities = 103/170 (60%), Positives = 124/170 (72%), Gaps = 2/170 (1%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKK 199 S+ A + AT VAPF GLKS+A P R+ CM+VWP G KK Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKK 66 Query: 200 FETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWK 376 FETLSYLP LT L K+VDYL+R+KW+PC+EF + GFV+REH ++PGYYDGRYWTMWK Sbjct: 67 FETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWK 126 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 526 LP+FGCTD+ QVL EVEE KKEYP A++RIIGFDN RQVQC+SFIA++PP Sbjct: 127 LPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
>RBS2_PETHY (P04715) Ribulose bisphosphate carboxylase small chain SSU11A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU11A) Length = 180 Score = 219 bits (557), Expect = 7e-57 Identities = 102/171 (59%), Positives = 129/171 (75%), Gaps = 2/171 (1%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKK 199 + +A + A+ A+ VAPF GLKS A P R++CMQVWP G KK Sbjct: 9 AAVATSTNAAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPYGKKK 68 Query: 200 FETLSYLPPLTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWK 376 +ETLSYLP LT E LLK+++YL+ WVPCLEF ++ GFV+RE+++SP YYDGRYWTMWK Sbjct: 69 YETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWK 128 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 LPMFGCTDATQVL E++E KK YP+A++RIIGFDN+RQVQC+SFIA++PPG Sbjct: 129 LPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179
>RBS2_FRIAG (O22572) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 179 Score = 218 bits (556), Expect = 1e-56 Identities = 102/165 (61%), Positives = 122/165 (73%), Gaps = 1/165 (0%) Frame = +2 Query: 32 APAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQVWPIEGIKKFET 208 A V + A+ VAPF GLKS + P R++CM+VWPI G+KKFET Sbjct: 14 AACVAPAQASMVAPFVGLKSASAFPVTQKTVTGLSTLPSNGGRVQCMKVWPIVGLKKFET 73 Query: 209 LSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMF 388 LSYLP L+ E+LLKQ++YLIR+ WVPCLEFS GFV R++N SPGYYDGRYWTMWKLPMF Sbjct: 74 LSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMF 133 Query: 389 GCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 GCTDA QV+ E E KKEYP A++R+IGFDN+RQVQCVSFI +P Sbjct: 134 GCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
>RBS3B_ARATH (P10798) Ribulose bisphosphate carboxylase small chain 3B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3B) Length = 181 Score = 218 bits (556), Expect = 1e-56 Identities = 103/175 (58%), Positives = 126/175 (72%), Gaps = 2/175 (1%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKK 199 S+ A + AT VAPF GLKS+A P R+ CM+VWP G KK Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKK 66 Query: 200 FETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWK 376 FETLSYLP L+ L K+VDYL+R+KW+PC+EF + GFV+REH ++PGYYDGRYWTMWK Sbjct: 67 FETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWK 126 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCEES 541 LP+FGCTD+ QVL EVEE KKEYP A++RIIGFDN RQVQC+SFIA++PP E+ Sbjct: 127 LPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTEA 181
>RBS1_MESCR (P16032) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 182 Score = 218 bits (556), Expect = 1e-56 Identities = 98/159 (61%), Positives = 121/159 (76%), Gaps = 1/159 (0%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFETLSYLPPL 229 + A+ VAPF GLKS A P R++CMQVWP G KKFETLSYLPPL Sbjct: 19 AQASMVAPFNGLKSVAAFPVTKKNNDITSVATNGGRVQCMQVWPPLGKKKFETLSYLPPL 78 Query: 230 TTEALLKQVDYLIRSKWVPCLEFSKV-GFVFREHNSSPGYYDGRYWTMWKLPMFGCTDAT 406 + E+L+K+V YL+ + WVPCLEF GFV+REH ++PGYYDGRYWTMWKLPMFGCTD + Sbjct: 79 SEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPS 138 Query: 407 QVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 QV+ E+EE KK YP+A++RIIGFDN+RQVQC+SFIA++P Sbjct: 139 QVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKP 177
>RBS0_SOLTU (P10647) Ribulose bisphosphate carboxylase small chain C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit C) Length = 181 Score = 218 bits (554), Expect = 2e-56 Identities = 102/163 (62%), Positives = 123/163 (75%), Gaps = 3/163 (1%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX--RIRCMQVWPIEGIKKFETLSYLP 223 + A+ VAPF GLKS A P R+RCMQVWP +KK+ETLSYLP Sbjct: 18 AQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLP 77 Query: 224 PLTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTD 400 L+ E LLK+V+YL+++ WVPCLEF ++ GFV+REHNSSPGYYDGRYWTMWKLPMFGCTD Sbjct: 78 DLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTMWKLPMFGCTD 137 Query: 401 ATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 TQVL EV+E K YP A++RIIGFDN+RQVQC+SFIA++P G Sbjct: 138 GTQVLAEVQEAKNAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
>RBS3_FRIAG (O22573) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 179 Score = 217 bits (553), Expect = 2e-56 Identities = 104/170 (61%), Positives = 126/170 (74%), Gaps = 3/170 (1%) Frame = +2 Query: 23 STMAPAVMAS--SATTVAPFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQVWPIEGI 193 S++A A A+ A+ VAPF GLKS + P R++CM+VWPI G+ Sbjct: 9 SSVATAARAAPAQASMVAPFVGLKSASAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGL 68 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 KKFETLSYLP L+ E+LLKQ++YLIR+ WVPCLEFS GFV R++N SPGYYDGRYWTMW Sbjct: 69 KKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMW 128 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 KLPMFGCTDA QV+ E E KKEYP A++R+IGFDN+RQVQCVSFI +P Sbjct: 129 KLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
>RBS_HELAN (P08705) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 217 bits (552), Expect = 3e-56 Identities = 104/170 (61%), Positives = 121/170 (71%), Gaps = 1/170 (0%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKF 202 S APA A VAPF GLKS A P R++CM+VWP G+KK+ Sbjct: 12 SRTAPA----QANMVAPFTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLGLKKY 67 Query: 203 ETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKL 379 ETLSYLPPLT L K+VDYL+R KWVPCLEF + GFV+RE+ SPGYYDGRYWTMWKL Sbjct: 68 ETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKL 127 Query: 380 PMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 PMFGCTD+ QV+ E+ E KKEYP A++RIIGFDN+RQVQC+ FIA RP G Sbjct: 128 PMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASRPDG 177
>RBS1_SOYBN (P00865) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 178 Score = 217 bits (552), Expect = 3e-56 Identities = 103/177 (58%), Positives = 125/177 (70%), Gaps = 10/177 (5%) Frame = +2 Query: 29 MAPAVMASSATT---------VAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWP 181 MA ++++S A T VAPF GLKS AG P R++CMQVWP Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 182 IEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGR 358 G KKFETLSYLP L L K+V+YL+R W+PCLEF + GFV+REHN SP YYDGR Sbjct: 61 PIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPXYYDGR 120 Query: 359 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 YWTMWKLPMFGCTDA+QVL E++E K YP+ ++RIIGFDN+RQVQC+SFIA++PPG Sbjct: 121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177
>RBS_STELP (Q41351) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 217 bits (552), Expect = 3e-56 Identities = 104/177 (58%), Positives = 129/177 (72%), Gaps = 12/177 (6%) Frame = +2 Query: 29 MAPAVMASSATT----------VAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQV 175 MA ++M+S+A VAPF GLKS A P R+RCMQV Sbjct: 1 MASSIMSSAAVATRSNGAQASMVAPFTGLKSNASFPVSRKTNLDITSIASNGGRVRCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYD 352 WP +KK+ETLSYLP L++E LL +++YL+++ WVPCLEF ++ GFV+REH SSPGYYD Sbjct: 61 WPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYD 120 Query: 353 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 GRYWTMWKLPMFGCTDATQV EV+E KK YPDA++RIIGFDN+RQVQC+SFIA++P Sbjct: 121 GRYWTMWKLPMFGCTDATQVAAEVQEAKKAYPDAHIRIIGFDNVRQVQCISFIAYKP 177
>RBS1_LYCES (P08706) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) (LESS17) Length = 181 Score = 216 bits (551), Expect = 4e-56 Identities = 102/163 (62%), Positives = 124/163 (76%), Gaps = 3/163 (1%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX--RIRCMQVWPIEGIKKFETLSYLP 223 + A+ VAPF GLKS A P R+RCMQVWP +KK+ETLSYLP Sbjct: 18 AQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLP 77 Query: 224 PLTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTD 400 L+ E LL +++YL+++ WVPCLEF ++ GFV+RE+NSSPGYYDGRYWTMWKLPMFGCTD Sbjct: 78 DLSDEQLLSEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTMWKLPMFGCTD 137 Query: 401 ATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 ATQVL EV+E KK YP A+VRIIGFDN+RQVQC+SFIA++P G Sbjct: 138 ATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 180
>RBS2_MESCR (Q04450) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 180 Score = 216 bits (550), Expect = 5e-56 Identities = 97/159 (61%), Positives = 120/159 (75%), Gaps = 1/159 (0%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFETLSYLPPL 229 + A+ VAPF GLKS + P R++CMQVWP G KKFETLSYLPPL Sbjct: 17 AQASMVAPFTGLKSVSAFPVTKKSNDITSIASNGGRVQCMQVWPPLGKKKFETLSYLPPL 76 Query: 230 TTEALLKQVDYLIRSKWVPCLEFSKV-GFVFREHNSSPGYYDGRYWTMWKLPMFGCTDAT 406 + E+L+K+V YL+ + WVPCLEF GFV+REH ++PGYYDGRYWTMWKLPMFGCTD + Sbjct: 77 SEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPS 136 Query: 407 QVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 QV+ E+EE KK YP+A+ RIIGFDN+RQVQC+SFIA++P Sbjct: 137 QVVAELEEAKKAYPEAFTRIIGFDNVRQVQCISFIAYKP 175
>RBS2_BRANA (P27985) Ribulose bisphosphate carboxylase small chain F1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit F1) Length = 181 Score = 216 bits (549), Expect = 6e-56 Identities = 102/170 (60%), Positives = 124/170 (72%), Gaps = 2/170 (1%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKK 199 S+ A + AT VAPF GLKS+A P R+ CM+VWP G KK Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWPPVGKKK 66 Query: 200 FETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWK 376 FETLSYLP LT L K+VDYL+R+KW+PC+EF + GFV+REH S+PGYYDGRYWTMWK Sbjct: 67 FETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWK 126 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 526 LP+FGCTD+ QVL EV+E K EYP+A++RIIGFDN RQVQC+SFIA++PP Sbjct: 127 LPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPP 176
>RBS3_PEA (P07689) Ribulose bisphosphate carboxylase small chain 3A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3A) Length = 180 Score = 216 bits (549), Expect = 6e-56 Identities = 106/177 (59%), Positives = 123/177 (69%), Gaps = 12/177 (6%) Frame = +2 Query: 29 MAPAVMASSATTV-----------APFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQV 175 MA + +S+ TTV APF GLKS G P R++CMQV Sbjct: 1 MASMISSSAVTTVSRASTVQSAAVAPFGGLKSMTGFPVKKVNTDITSITSNGGRVKCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYD 352 WP G KKFETLSYLPPLT + LLK+V+YL+R WVPCLEF + GFV+REHN SPGYYD Sbjct: 61 WPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYD 120 Query: 353 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 GRYWTMWKLPMFG TDA+QVL E++EV YP A+VRIIGFDN+RQVQC+SFIA P Sbjct: 121 GRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177
>RBS2_PEA (P00869) Ribulose bisphosphate carboxylase small chain 3C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3C) (PSS15) Length = 180 Score = 216 bits (549), Expect = 6e-56 Identities = 106/177 (59%), Positives = 123/177 (69%), Gaps = 12/177 (6%) Frame = +2 Query: 29 MAPAVMASSATTV-----------APFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQV 175 MA + +S+ TTV APF GLKS G P R++CMQV Sbjct: 1 MASMISSSAVTTVSRASRGQSAAVAPFGGLKSMTGFPVKKVNTDITSITSNGGRVKCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYD 352 WP G KKFETLSYLPPLT + LLK+V+YL+R WVPCLEF + GFV+REHN SPGYYD Sbjct: 61 WPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYD 120 Query: 353 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 GRYWTMWKLPMFG TDA+QVL E++EV YP A+VRIIGFDN+RQVQC+SFIA P Sbjct: 121 GRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177
>RBS1_PETHY (P04714) Ribulose bisphosphate carboxylase small chain SSU8,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU8) Length = 180 Score = 216 bits (549), Expect = 6e-56 Identities = 100/171 (58%), Positives = 126/171 (73%), Gaps = 2/171 (1%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKK 199 + +A + A+ VAPF GLKS P R++CMQVWP G KK Sbjct: 9 AAVATRTNVAQASMVAPFNGLKSAVSFPVSSKQNLDITSIASNGGRVQCMQVWPPYGKKK 68 Query: 200 FETLSYLPPLTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWK 376 +ETLSYLP LT E LLK+++YL+ WVPCLEF ++ GFV+RE+++SP YYDGRYWTMWK Sbjct: 69 YETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWK 128 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 LPMFGCTDATQVL E++E KK YP+A++RIIGFDN+RQVQC+SFIA++PPG Sbjct: 129 LPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179
>RBS5_FRIAG (O22645) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 179 Score = 215 bits (548), Expect = 8e-56 Identities = 103/170 (60%), Positives = 125/170 (73%), Gaps = 3/170 (1%) Frame = +2 Query: 23 STMAPAVMAS--SATTVAPFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQVWPIEGI 193 S++A A A+ A+ VAPF GLKS + P R++CM+VWPI G+ Sbjct: 9 SSVATAACAAPAQASMVAPFVGLKSASAFPVTQKTATGLSTLPSNGGRVQCMKVWPIVGL 68 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 KKFETLSYLP L+ E+LLKQ++YLIR+ WVPCLEFS GFV R++N SPGYYDGRYWTMW Sbjct: 69 KKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMW 128 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 KLPMFGCT A QV+ E E KKEYP A++R+IGFDN+RQVQCVSFI +P Sbjct: 129 KLPMFGCTGAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
>RBS4_SOYBN (P12468) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 178 Score = 215 bits (548), Expect = 8e-56 Identities = 103/176 (58%), Positives = 125/176 (71%), Gaps = 10/176 (5%) Frame = +2 Query: 29 MAPAVMASSATT---------VAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWP 181 MA ++++S A T VAPF GLKS AGLP R++CMQVWP Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGLPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 182 IEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGR 358 G KKFETLSYLP L L K+V+YL+R W+PCLEF + GFV+REHN S GYYDGR Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSLGYYDGR 120 Query: 359 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 526 YWTMWKLPMFGCTDA+QVL E++E K YP+ ++RIIGFDN+RQVQC+SFIA++PP Sbjct: 121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPP 176
>RBS_RAPSA (P08135) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 215 bits (547), Expect = 1e-55 Identities = 102/170 (60%), Positives = 123/170 (72%), Gaps = 2/170 (1%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKK 199 S+ A AT VAPF GLKS+A P R+ CM+VWP G KK Sbjct: 7 SSAAVVTSQLQATMVAPFTGLKSSAAFPVTRKTNTDITSIASNGGRVSCMKVWPPIGKKK 66 Query: 200 FETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWK 376 FETLSYLP L+ L K+VDYL+R+KW+PC+EF + GFV+REH S+PGYYDGRYWTMWK Sbjct: 67 FETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWK 126 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 526 LP+FGCTD+ QVL EV+E KKEYP+A +RIIGFDN RQVQC+SFIA++PP Sbjct: 127 LPLFGCTDSAQVLKEVQECKKEYPNALIRIIGFDNNRQVQCISFIAYKPP 176
>RBS3_SOLTU (P32764) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 181 Score = 215 bits (547), Expect = 1e-55 Identities = 101/163 (61%), Positives = 124/163 (76%), Gaps = 3/163 (1%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX--RIRCMQVWPIEGIKKFETLSYLP 223 + A+ VAPF GLKS A P R+RCMQVWP +KK+ETLSYLP Sbjct: 18 AQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLP 77 Query: 224 PLTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTD 400 L+ E LLK+V+YL+++ WVPCLEF ++ GFV+RE++ SPGYYDGRYWTMWKLPMFGCTD Sbjct: 78 DLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTD 137 Query: 401 ATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 ATQVL EV+E KK YP A++RIIGFDN+RQVQC+SFIA++P G Sbjct: 138 ATQVLAEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
>RBS2_NICSY (P22433) Ribulose bisphosphate carboxylase small chain S41,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit S41) Length = 181 Score = 215 bits (547), Expect = 1e-55 Identities = 101/171 (59%), Positives = 126/171 (73%), Gaps = 2/171 (1%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKK 199 + +A A+ A+ +APF GLKS P R++CMQVWP KK Sbjct: 10 AAVATGTNAAQASMIAPFTGLKSATSFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKK 69 Query: 200 FETLSYLPPLTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWK 376 +ETLSYLP L+ E LL++V+YL+++ WVPCLEF ++ GFV+RE+N SPGYYDGRYWTMWK Sbjct: 70 YETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWK 129 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 LPMFGCTDATQVL EVEE KK YP A++RIIGFDN+RQVQC+SFIA++P G Sbjct: 130 LPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
>RBS_GLYTO (Q42822) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 215 bits (547), Expect = 1e-55 Identities = 99/169 (58%), Positives = 121/169 (71%), Gaps = 1/169 (0%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKF 202 S V + A TVAPF GLKS AG P R++CMQVWP G KKF Sbjct: 8 SPAVTTVNRAGAGTVAPFTGLKSMAGFPTRKTNNDIASIASNGGRVQCMQVWPTTGKKKF 67 Query: 203 ETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKL 379 ETLSYLP L L K+V+YL+R W+PCLEF + GFV+RE++ SPGYYDGRYWTMWKL Sbjct: 68 ETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKL 127 Query: 380 PMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 526 P+FGCTDA+QVL E++E K YP+ ++RIIGFDN+RQVQC+SFIA++PP Sbjct: 128 PVFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPP 176
>RBS_FLATR (P07089) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 173 Score = 215 bits (547), Expect = 1e-55 Identities = 103/168 (61%), Positives = 124/168 (73%), Gaps = 3/168 (1%) Frame = +2 Query: 35 PAVMASSATT--VAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFET 208 PA +A+ T VAPF GLK+ A P R++CM+VWP G KK+ET Sbjct: 5 PATVAAVPQTNMVAPFTGLKANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGKKKYET 64 Query: 209 LSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPM 385 LSYLP LT L K+VDYL+R+KWVPCLEF + GFV+RE+ SSPGYYDGRYWTMWKLPM Sbjct: 65 LSYLPELTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENASSPGYYDGRYWTMWKLPM 124 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 FGCTD+ QV+ E++E KKEYP A++RIIGFDN+RQVQCVSFIA +P G Sbjct: 125 FGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCVSFIASKPTG 172
>RBS1_SOLTU (P26574) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 181 Score = 214 bits (546), Expect = 1e-55 Identities = 100/164 (60%), Positives = 124/164 (75%), Gaps = 2/164 (1%) Frame = +2 Query: 44 MASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFETLSYL 220 + + + +APF GLKS A P R+RCMQVWP +KK+ETLSYL Sbjct: 17 VTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYL 76 Query: 221 PPLTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCT 397 P LT E LLK+V+YL+++ WVPCLEF ++ GFV+RE++ SPGYYDGRYWTMWKLPMFGCT Sbjct: 77 PDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCT 136 Query: 398 DATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 DATQVL EV+E KK YP A++RIIGFDN+RQVQC+SFIA++P G Sbjct: 137 DATQVLAEVQECKKSYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
>RBS8_NICPL (P26573) Ribulose bisphosphate carboxylase small chain 8B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) Length = 180 Score = 214 bits (546), Expect = 1e-55 Identities = 102/162 (62%), Positives = 121/162 (74%), Gaps = 2/162 (1%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFETLSYLPP 226 + A VAPF GLKS A P R++CMQVWP KK+ETLSYLP Sbjct: 18 AQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPD 77 Query: 227 LTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDA 403 L+ E LL +++YL++S WVPCLEF ++ GFV+REH+ SPGYYDGRYWTMWKLPMFGCTDA Sbjct: 78 LSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDA 137 Query: 404 TQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 TQVL EVEE KK YP A+VRIIGFDN+RQVQC+SFIA++P G Sbjct: 138 TQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
>RBS6_MESCR (Q08186) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) Length = 186 Score = 214 bits (545), Expect = 2e-55 Identities = 100/169 (59%), Positives = 124/169 (73%), Gaps = 2/169 (1%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQVWPIEGIKK 199 +T A + A+ VAPF GLKS + P +++CMQVWP G KK Sbjct: 13 TTAASRSAGAQASMVAPFTGLKSVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWPPLGKKK 72 Query: 200 FETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKV-GFVFREHNSSPGYYDGRYWTMWK 376 FETLSYLPPL+ E+LLK+V YL+ + WVPCLEF GFV+REH ++PGYYDGRYWTMWK Sbjct: 73 FETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWK 132 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 LPMFGCTD +QV+ E+EE KK YP+A++RIIGFDN+RQVQCVSFIA++P Sbjct: 133 LPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 181
>RBS1_BRANA (P05346) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 214 bits (545), Expect = 2e-55 Identities = 101/170 (59%), Positives = 124/170 (72%), Gaps = 2/170 (1%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKK 199 S+ A + AT VAPF GLKS++ P R+ CM+VWP G KK Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKKK 66 Query: 200 FETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWK 376 FETLSYLP LT L K+VDYL+R+KW+PC+EF + GFV+REH S+PGYYDGRYWTMWK Sbjct: 67 FETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWK 126 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 526 LP+FGCTD+ QVL EV+E K EYP+A++RIIGFDN RQVQC+SFIA++PP Sbjct: 127 LPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPP 176
>RBS3_AMAHP (Q9XGX4) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 180 Score = 214 bits (545), Expect = 2e-55 Identities = 101/169 (59%), Positives = 117/169 (69%), Gaps = 1/169 (0%) Frame = +2 Query: 26 TMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFE 205 T + A VAPF GLKS A P R++CMQVWP G KKFE Sbjct: 11 TAVVGASGAQANMVAPFNGLKSIASFPVTRKSNDITSIASNGGRVQCMQVWPPVGKKKFE 70 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLP 382 TLSYLPPL+ LL QV YL+ + W+PC+EF + FV+RE++ SPGY DGRYWTMWKLP Sbjct: 71 TLSYLPPLSDAQLLAQVQYLLNNGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLP 130 Query: 383 MFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 M+GCTD QVLNEVEE KK YP A++RIIGFDN RQVQCVSFIAF+PPG Sbjct: 131 MYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAFKPPG 179
>RBS4_FLAPR (Q39746) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 178 Score = 214 bits (544), Expect = 2e-55 Identities = 103/170 (60%), Positives = 122/170 (71%), Gaps = 1/170 (0%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKF 202 S APA A VAPF GLKS A P R++CM+VWP G KK+ Sbjct: 12 SRAAPA----QANMVAPFTGLKSNAAFPATKKANDFSTLPSNGGRVQCMKVWPPLGKKKY 67 Query: 203 ETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKL 379 ETLSYLP LT L K+VDYL+R+KWVPCLEF + GFV+RE+ SPGYYDGRYWTMWKL Sbjct: 68 ETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKL 127 Query: 380 PMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 PMFGCTD+ QV+ E++E KKEYP A++RIIGFDN+RQVQC+SFIA +P G Sbjct: 128 PMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 177
>RBS3A_LYCES (P07180) Ribulose bisphosphate carboxylase small chain 3A/3C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3A/3C) Length = 180 Score = 214 bits (544), Expect = 2e-55 Identities = 105/179 (58%), Positives = 129/179 (72%), Gaps = 12/179 (6%) Frame = +2 Query: 29 MAPAVMASSATT----------VAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQV 175 MA +VM+S+A VAPF GLKSTA P R+ CMQV Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQV 60 Query: 176 WPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYD 352 WP +KK+ETLSYLP L+ E LL +++YL+++ WVPCLEF ++ GFV+RE++ SPGYYD Sbjct: 61 WPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYD 120 Query: 353 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 GRYWTMWKLPMFGCTDATQVL EV+E KK YP A+VRIIGFDN+RQVQC+SFIA++P G Sbjct: 121 GRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
>RBS_MANES (Q42915) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 214 bits (544), Expect = 2e-55 Identities = 99/165 (60%), Positives = 120/165 (72%), Gaps = 2/165 (1%) Frame = +2 Query: 41 VMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFETLSY 217 V + AT VAPF GLKST P +++CM+VWP G+KKFETLSY Sbjct: 17 VSPAQATMVAPFTGLKSTPVFPTTRKTNSDITSITSNGGKVQCMKVWPTLGMKKFETLSY 76 Query: 218 LPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGC 394 LPPLT E L +V+YL+RS W+PCLEF + G V+REH PGYYDGRYWTMWKLPMFGC Sbjct: 77 LPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPMFGC 136 Query: 395 TDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 TDA QVL E++E+ K +PD Y RIIGFDN+RQVQC+SF+A++PPG Sbjct: 137 TDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQCISFLAYKPPG 181
>RBS_TOBAC (P69249) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) (TSSU3-8) Length = 180 Score = 213 bits (542), Expect = 4e-55 Identities = 101/162 (62%), Positives = 121/162 (74%), Gaps = 2/162 (1%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFETLSYLPP 226 + A VAPF GLKS A P R++CMQVWP KK+ETLSYLP Sbjct: 18 AQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPD 77 Query: 227 LTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDA 403 L+ E LL +V+YL+++ WVPCLEF ++ GFV+RE+N SPGYYDGRYWTMWKLPMFGCTDA Sbjct: 78 LSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDA 137 Query: 404 TQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 TQVL EVEE KK YP A++RIIGFDN+RQVQC+SFIA++P G Sbjct: 138 TQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
>RBS3B_LYCES (P05349) Ribulose bisphosphate carboxylase small chain 3B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3B) Length = 180 Score = 213 bits (542), Expect = 4e-55 Identities = 100/162 (61%), Positives = 123/162 (75%), Gaps = 2/162 (1%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFETLSYLPP 226 + A+ VAPF GLKSTA P R+ CMQVWP +KK+ETLSYLP Sbjct: 18 AQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPD 77 Query: 227 LTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDA 403 L+ E LL +++YL+++ WVPCLEF ++ GFV+RE++ SPGYYDGRYWTMWKLPMFGCTDA Sbjct: 78 LSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDA 137 Query: 404 TQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 TQVL EV+E KK YP A+VRIIGFDN+RQVQC+SFIA++P G Sbjct: 138 TQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
>RBS1_NICSY (P69250) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 213 bits (542), Expect = 4e-55 Identities = 101/162 (62%), Positives = 121/162 (74%), Gaps = 2/162 (1%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFETLSYLPP 226 + A VAPF GLKS A P R++CMQVWP KK+ETLSYLP Sbjct: 18 AQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPD 77 Query: 227 LTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDA 403 L+ E LL +V+YL+++ WVPCLEF ++ GFV+RE+N SPGYYDGRYWTMWKLPMFGCTDA Sbjct: 78 LSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDA 137 Query: 404 TQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 TQVL EVEE KK YP A++RIIGFDN+RQVQC+SFIA++P G Sbjct: 138 TQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
>RBS_BETVE (Q96542) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 213 bits (542), Expect = 4e-55 Identities = 104/173 (60%), Positives = 126/173 (72%), Gaps = 4/173 (2%) Frame = +2 Query: 23 STMAPAVMASSATT--VAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGI 193 +T+A AS A + VAPF LKST+ P R++CMQVWP G+ Sbjct: 9 ATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGL 68 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTM 370 KKFETLSYLPPL++E L K+VDYL+R +PCLEF + GFV+REHN SPGYYDGRYWTM Sbjct: 69 KKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTM 128 Query: 371 WKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 WKLPMFGC D++QVL E+EE KK YP A++RIIGFDN RQVQ +SFIA++PPG Sbjct: 129 WKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKPPG 181
>RBS7_FLAPR (Q39749) Ribulose bisphosphate carboxylase small chain 7,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 7) Length = 173 Score = 213 bits (542), Expect = 4e-55 Identities = 101/168 (60%), Positives = 123/168 (73%), Gaps = 3/168 (1%) Frame = +2 Query: 35 PAVMAS--SATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFET 208 PA +A+ A VAPF GLKS A P R++CM+VWP G K++ET Sbjct: 5 PATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLASNGGRVQCMKVWPPLGKKRYET 64 Query: 209 LSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPM 385 LSYLP LT L K+VDYL+R+KWVPCLEF + GFV+RE+ SPGYYDGRYWTMWKLPM Sbjct: 65 LSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPM 124 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 FGCTD+ QV+ E++E KKEYP A++RIIGFDN+RQVQC+SFIA +P G Sbjct: 125 FGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
>RBS3_FLAPR (Q39745) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 173 Score = 213 bits (542), Expect = 4e-55 Identities = 101/168 (60%), Positives = 123/168 (73%), Gaps = 3/168 (1%) Frame = +2 Query: 35 PAVMAS--SATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFET 208 PA +A+ A VAPF GLKS A P R++CM+VWP G K++ET Sbjct: 5 PATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKRYET 64 Query: 209 LSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPM 385 LSYLP LT L K+VDYL+R+KWVPCLEF + GFV+RE+ SPGYYDGRYWTMWKLPM Sbjct: 65 LSYLPNLTESQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPM 124 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 FGCTD+ QV+ E++E KKEYP A++RIIGFDN+RQVQC+SFIA +P G Sbjct: 125 FGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
>RBS_CAPAN (O65349) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 187 Score = 213 bits (542), Expect = 4e-55 Identities = 100/169 (59%), Positives = 124/169 (73%), Gaps = 2/169 (1%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKK 199 +T+A A+ A+ +A F GLKS A P R+ CM VWP KK Sbjct: 9 ATVATGANAAQASMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKK 68 Query: 200 FETLSYLPPLTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWK 376 +ETLSYLP L+ E LLK+++YL++ WVPCLEF ++ GFV+REH+ SPGYYDGRYWTMWK Sbjct: 69 YETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWK 128 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 LPMFGCTDATQVLNEV+E KK YP A++RIIGFDN+RQVQC+SFIA++P Sbjct: 129 LPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
>RBS2A_LYCES (P07179) Ribulose bisphosphate carboxylase small chain 2A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2A) (LESS 5) Length = 180 Score = 213 bits (541), Expect = 5e-55 Identities = 100/162 (61%), Positives = 123/162 (75%), Gaps = 2/162 (1%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFETLSYLPP 226 + A+ VAPF GLKS+A P R+ CMQVWP +KK+ETLSYLP Sbjct: 18 TQASMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPD 77 Query: 227 LTTEALLKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDA 403 L+ E LL +++YL+++ WVPCLEF ++ GFV+RE+N SPGYYDGRYWTMWKLPMFGCTDA Sbjct: 78 LSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDA 137 Query: 404 TQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 TQVL EV+E KK YP A+VRIIGFDN+RQVQC+SFIA++P G Sbjct: 138 TQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
>RBS_TRIRP (P17673) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 212 bits (540), Expect = 7e-55 Identities = 99/157 (63%), Positives = 115/157 (73%), Gaps = 1/157 (0%) Frame = +2 Query: 56 ATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFETLSYLPPLTT 235 A PF GLKS+AG P R+ CMQVWP G KKFETLSYLPPLT Sbjct: 19 ANLATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTD 78 Query: 236 EALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQV 412 E LLK+V+YL+R WVPC+EF + GFV R++NSSPGYYDGRYWTMW+LP+FG TDA QV Sbjct: 79 EQLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQV 138 Query: 413 LNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 L EV E K EYP+A++RIIGFDN+RQVQC+SFIA P Sbjct: 139 LKEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTP 175
>RBS5_FLAPR (Q39747) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 173 Score = 212 bits (540), Expect = 7e-55 Identities = 101/168 (60%), Positives = 123/168 (73%), Gaps = 3/168 (1%) Frame = +2 Query: 35 PAVMAS--SATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFET 208 PA +A+ A VAPF GLKS A P R++CM+VWP G K++ET Sbjct: 5 PATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKRYET 64 Query: 209 LSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPM 385 LSYLP LT L K+VDYL+R+KWVPCLEF + GFV+RE+ SPGYYDGRYWTMWKLPM Sbjct: 65 LSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPM 124 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 FGCTD+ QV+ E++E KKEYP A++RIIGFDN+RQVQC+SFIA +P G Sbjct: 125 FGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
>RBS1_FLAPR (Q39743) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 173 Score = 212 bits (540), Expect = 7e-55 Identities = 101/168 (60%), Positives = 123/168 (73%), Gaps = 3/168 (1%) Frame = +2 Query: 35 PAVMAS--SATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFET 208 PA +A+ A VAPF GLK+ A P R++CM+VWP G KK+ET Sbjct: 5 PATVATVAQANMVAPFTGLKANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKKYET 64 Query: 209 LSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPM 385 LSYLP LT L K+VDYL+R+KWVPCLEF + GFV+RE+ SPGYYDGRYWTMWKLPM Sbjct: 65 LSYLPDLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPM 124 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 FGCTD+ QV+ E++E KKEYP A++RIIGFDN+RQVQC+SFIA +P G Sbjct: 125 FGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPGG 172
>RBS_HEVBR (P29684) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 211 bits (538), Expect = 1e-54 Identities = 99/164 (60%), Positives = 120/164 (73%), Gaps = 2/164 (1%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFETLSYLPP 226 + A+ VAPF GLKST+ P R++CMQVWP G K +ETLSYLPP Sbjct: 20 AQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPP 79 Query: 227 LTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDA 403 LT E L K+V+YL+R WVPCLEF + G V+RE++ SPGYYDGRYWTMWKLPMFGCTDA Sbjct: 80 LTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDA 139 Query: 404 TQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCE 535 QVL E++E+ K YPD Y RIIGFDN+RQVQC+SF+A++P G E Sbjct: 140 VQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKGAE 183
>RBS_CUCSA (P08474) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 189 Score = 211 bits (538), Expect = 1e-54 Identities = 94/160 (58%), Positives = 124/160 (77%), Gaps = 2/160 (1%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFETLSYLPP 226 + A+ VAPF GLKS+AG P +++CM+VWP G++KFETLSYLP Sbjct: 20 AQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCMKVWPPLGLRKFETLSYLPD 79 Query: 227 LTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDA 403 ++ E L K+ DYL+R+ WVPC+EF GFV+RE++ SPG+YDGRYWTMWKLPMFGCTD+ Sbjct: 80 MSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGFYDGRYWTMWKLPMFGCTDS 139 Query: 404 TQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 +QV+ E+EE KKEYPDA++R+IGFDN+RQVQC+SFIA++P Sbjct: 140 SQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKP 179
>RBS2_FLAPR (Q39744) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 178 Score = 211 bits (537), Expect = 2e-54 Identities = 101/170 (59%), Positives = 121/170 (71%), Gaps = 1/170 (0%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKF 202 S APA A VAPF GLKS P R++CM+VWP G K++ Sbjct: 12 SRAAPA----QANMVAPFTGLKSNVAFPATKKANDFSTLPSNGGRVQCMKVWPPLGKKRY 67 Query: 203 ETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKL 379 ETLSYLP LT L K+VDYL+R+KWVPCLEF + GFV+RE+ SPGYYDGRYWTMWKL Sbjct: 68 ETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKL 127 Query: 380 PMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 PMFGCTD+ QV+ E++E KKEYP A++RIIGFDN+RQVQC+SFIA +P G Sbjct: 128 PMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPEG 177
>RBS_FAGCR (O22077) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 211 bits (537), Expect = 2e-54 Identities = 98/161 (60%), Positives = 120/161 (74%), Gaps = 2/161 (1%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFETLSYLPP 226 + AT VAPF GLKSTA P R++CM+VWP G++KFETLSYLPP Sbjct: 20 AQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPP 79 Query: 227 LTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDA 403 L+ E+L KQ++YLI W+PCLEF + FV+RE+N SPGYYDGRYW MWKLPMFGCTDA Sbjct: 80 LSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDA 139 Query: 404 TQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 526 TQVL E++E K YP +++RIIGFDN RQVQC+SFIA++PP Sbjct: 140 TQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIAYKPP 180
>RBS_GOSHI (P31333) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 209 bits (533), Expect = 5e-54 Identities = 99/162 (61%), Positives = 119/162 (73%), Gaps = 2/162 (1%) Frame = +2 Query: 50 SSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFETLSYLPP 226 + A VAPF GLKS + P R++CMQVWP G KKFETLSYLP Sbjct: 20 AQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPD 79 Query: 227 LTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDA 403 LT L K+VDYL+RSKW+PCLEF + GFV R+++S P YYDGRYWTMWKLPMFGCTD+ Sbjct: 80 LTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMFGCTDS 139 Query: 404 TQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 QVL E+E KKEYP+A++RIIGFDN+RQVQC+SFIA++P G Sbjct: 140 AQVLEELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPKG 181
>RBS_PINTH (P10053) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 171 Score = 208 bits (530), Expect = 1e-53 Identities = 98/170 (57%), Positives = 118/170 (69%), Gaps = 5/170 (2%) Frame = +2 Query: 29 MAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXX-----XXXXXXRIRCMQVWPIEGI 193 MA A +AT V+ F GLKSTA P R+RCMQVWP G Sbjct: 1 MATGAGAGAATVVSAFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGN 60 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 KFETLSYLP LT E L+K+V+YL+R+KWVPCLEF G + R++N SPGYYDGRYW MW Sbjct: 61 PKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMW 120 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 KLPMFGCT+A+QV+NEV E K YP A++R+IGFDN+RQVQC+SFI +P Sbjct: 121 KLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
>RBS6_FLAPR (Q39748) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) Length = 173 Score = 208 bits (530), Expect = 1e-53 Identities = 99/166 (59%), Positives = 121/166 (72%), Gaps = 3/166 (1%) Frame = +2 Query: 35 PAVMAS--SATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFET 208 PA +A+ A VAPF GLK+ A P R++CM+VWP G KK+ T Sbjct: 5 PATVAAVAQANMVAPFTGLKANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKKYXT 64 Query: 209 LSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPM 385 LSYLP LT L K+VDYL+R+KWVPCLEF + GFV+RE+ SPGYYDGRYWTMWKLPM Sbjct: 65 LSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPM 124 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 FGCTD+ QV+ E++E KKEYP A++RIIGFDN+RQVQC+SFIA +P Sbjct: 125 FGCTDSVQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKP 170
>RBS_MEDSA (O65194) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 207 bits (528), Expect = 2e-53 Identities = 97/161 (60%), Positives = 119/161 (73%), Gaps = 2/161 (1%) Frame = +2 Query: 47 ASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKKFETLSYLP 223 ++ A VAPF GLKS+AG P R+ CMQVWP G KKFETLSYLP Sbjct: 17 SAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLP 76 Query: 224 PLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTD 400 PLT E L K+V+YLIR W+PCLEF + GFV+RE++ SPGYYDGRYWTMW+LP+FG TD Sbjct: 77 PLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATD 136 Query: 401 ATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 ++QVL E+ + K EYPD+++RIIGFDN+RQVQC+SFIA P Sbjct: 137 SSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177
>RBS2_AMAHP (Q9XGX5) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 184 Score = 207 bits (528), Expect = 2e-53 Identities = 102/169 (60%), Positives = 118/169 (69%), Gaps = 5/169 (2%) Frame = +2 Query: 32 APAVMASS----ATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKK 199 A AV A+S A VAPF GLKS A P R++CMQVWP G KK Sbjct: 12 AVAVAATSGGAQANMVAPFNGLKSIASFPVTRKSNDITSIASNGGRVQCMQVWPPVGKKK 71 Query: 200 FETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWK 376 FETLSYLPPL+ LL QV YL+ W+PC+EF + FV+RE++ SPGY DGRYWTMWK Sbjct: 72 FETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWK 131 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 LPM+GCTD QVLNEVEE KK YP A++RIIGFDN RQVQCVSFIA++P Sbjct: 132 LPMYGCTDPAQVLNEVEEAKKAYPTAFIRIIGFDNKRQVQCVSFIAYKP 180
>RBS_SILPR (P18960) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 177 Score = 206 bits (524), Expect = 5e-53 Identities = 101/170 (59%), Positives = 121/170 (71%), Gaps = 3/170 (1%) Frame = +2 Query: 23 STMAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXX-RIRCMQVWPIEGIKK 199 + + A A+ A VAPF GLKST+ P R+ CMQVWP +KK Sbjct: 8 AAVVTASTAAQANMVAPFSGLKSTSAFPVSRKSNVDITSLATNGGRVNCMQVWPPRNLKK 67 Query: 200 FETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVG--FVFREHNSSPGYYDGRYWTMW 373 FETLSYLP L+ E+LLK+++YL+ WVPCLEF +VG V+RE+N SPGYYDGRYWTMW Sbjct: 68 FETLSYLPTLSEESLLKEINYLLIKGWVPCLEF-EVGPAHVYRENNKSPGYYDGRYWTMW 126 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 KLPMFGCTDA+QV EV E K YPDA+VRIIGFDN RQVQC+SFIA++P Sbjct: 127 KLPMFGCTDASQVAAEVVECKNAYPDAHVRIIGFDNKRQVQCISFIAYKP 176
>RBS1_AMAHP (Q42516) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 183 Score = 206 bits (523), Expect = 7e-53 Identities = 103/178 (57%), Positives = 122/178 (68%), Gaps = 9/178 (5%) Frame = +2 Query: 23 STMAPAVMASSATT-------VAPFQGLKSTAGLPXXXXXXXXXXXX-XXXXRIRCMQVW 178 S ++ A MA++A T VAPF GLKS A P R++CMQVW Sbjct: 4 SMLSNAAMATTAATAGAQASMVAPFNGLKSFATFPITKKSSNDFSSLPSNGGRVQCMQVW 63 Query: 179 PIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDG 355 P G KKFETLSYLPPL+ LL QV YL+ W+PC+EF + FV+RE++ SPGY DG Sbjct: 64 PPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDG 123 Query: 356 RYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 RYWTMWKLPM+GCTD QVLNEVEE KK YP A++RIIGFDN RQVQCVSFIA++P G Sbjct: 124 RYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAYKPAG 181
>RBS_LARLA (P16031) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 189 Score = 200 bits (508), Expect = 4e-51 Identities = 97/177 (54%), Positives = 121/177 (68%), Gaps = 10/177 (5%) Frame = +2 Query: 23 STMAPAVMASSATT-----VAPFQGLKSTAGLPXXXXXXXXXX-----XXXXXXRIRCMQ 172 ST A A +A+ + T V+ F GLKS A P R+RCMQ Sbjct: 10 STAAVAAVAAPSKTGNSNVVSAFTGLKSMAQFPSSKTMSNAGAEWEQKTTSNGSRVRCMQ 69 Query: 173 VWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYD 352 VWP KKFETLSYLP LT E L+K+V+YL+++KWVPCLEF + G + R + +SPGYYD Sbjct: 70 VWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKRVYGNSPGYYD 129 Query: 353 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 GRYW MWKLPMFGCT+A+QVLNEV E K YP+A++R+IGFDN+RQVQC+SFI +P Sbjct: 130 GRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCISFIVHKP 186
>RBS1_PEA (P00868) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) (PSSU1) (Fragment) Length = 136 Score = 190 bits (482), Expect = 4e-48 Identities = 86/124 (69%), Positives = 102/124 (82%), Gaps = 1/124 (0%) Frame = +2 Query: 155 RIRCMQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKV-GFVFREHN 331 R++CMQVWP G KKFETLSYLPPLT + LLK+V+YL+R WVPCLEF + GFV+ EHN Sbjct: 10 RVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELLKGFVYGEHN 69 Query: 332 SSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFI 511 SP YYDGRYWTMWKLPMFG TD QV+ EV+EV YP+A+VR+IGF+N+RQVQC+SFI Sbjct: 70 KSPRYYDGRYWTMWKLPMFGTTDPAQVVKEVDEVVAAYPEAFVRVIGFNNVRQVQCISFI 129 Query: 512 AFRP 523 A P Sbjct: 130 AHTP 133
>RBS1_SPIOL (P00870) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 123 Score = 187 bits (474), Expect = 3e-47 Identities = 87/122 (71%), Positives = 102/122 (83%), Gaps = 1/122 (0%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPG 343 MQVWP G+KKFETLSYLPPLTTE LL +V+YL+ W+P LEF K GFV+REH+ SPG Sbjct: 1 MQVWPPLGLKKFETLSYLPPLTTEQLLAEVNYLLVKGWIPPLEFEVKDGFVYREHDKSPG 60 Query: 344 YYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 YYDGRYWTMWKLPMFG TD QV+NEVEEVKK PDA+VR IGF++ R+VQC+SFIA++P Sbjct: 61 YYDGRYWTMWKLPMFGGTDPAQVVNEVEEVKKAPPDAFVRFIGFNDKREVQCISFIAYKP 120 Query: 524 PG 529 G Sbjct: 121 AG 122
>RBS_MARPA (O64416) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 172 bits (436), Expect = 8e-43 Identities = 86/163 (52%), Positives = 103/163 (63%), Gaps = 4/163 (2%) Frame = +2 Query: 47 ASSATTVAPFQGLKSTAGLPXXXXXXXX---XXXXXXXXRIRCMQVWPIEGIKKFETLSY 217 AS+A+T Q + AGL R+ CMQVW KFETLSY Sbjct: 16 ASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSY 75 Query: 218 LPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCT 397 LPPL+ +AL KQ+DY+I+S W PC+EF G V RE ++ PGYYDGRYWTMWKLPMFGCT Sbjct: 76 LPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCT 135 Query: 398 DATQVLNEVEEVKKEY-PDAYVRIIGFDNLRQVQCVSFIAFRP 523 D+ VL E+EE KK Y Y+R +GFDN RQVQC SFI +P Sbjct: 136 DSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQCASFIVHQP 178
>RBS5_ACECL (P16133) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 184 Score = 141 bits (355), Expect = 2e-33 Identities = 72/173 (41%), Positives = 96/173 (55%), Gaps = 7/173 (4%) Frame = +2 Query: 29 MAPAVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFET 208 MA A+M + T V G ++ +P + R M VW K FET Sbjct: 1 MAAAMM--NKTIVVSKDGCARSSSIPKVATNKMGFASAVAMKKSREMMVWQPFNNKMFET 58 Query: 209 LSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWT 367 SYLPPLT E + KQVDY++ + W PCLEF+ + + + + Y D RYWT Sbjct: 59 FSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWT 118 Query: 368 MWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 526 MWKLPMFGCTD +QVL+E++ K +PDAY+R++ FD RQVQ F+ RPP Sbjct: 119 MWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 171
>RBS_CHLMO (P17537) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 168 Score = 141 bits (355), Expect = 2e-33 Identities = 64/130 (49%), Positives = 84/130 (64%), Gaps = 7/130 (5%) Frame = +2 Query: 170 QVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVF-------REH 328 +VW K++ET SYLPPLT + + +QVDY+I + W PCLEF+ F R Sbjct: 30 KVWQPVNNKQYETFSYLPPLTNQKIGRQVDYIINNGWTPCLEFADPSTSFVSNANAVRLQ 89 Query: 329 NSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSF 508 S GYYD RYWTMWKLPMFGCTD +QVL EV + +P+ Y+R++ FDN++QVQC+ F Sbjct: 90 GVSAGYYDNRYWTMWKLPMFGCTDPSQVLREVSACQVAFPNVYIRLVAFDNVKQVQCMGF 149 Query: 509 IAFRPPGCEE 538 + RP E Sbjct: 150 LVQRPRNAAE 159
>RBS3_ACECL (P16131) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 183 Score = 139 bits (349), Expect = 1e-32 Identities = 67/156 (42%), Positives = 86/156 (55%), Gaps = 7/156 (4%) Frame = +2 Query: 92 TAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIR 271 T P + R M VW K FET SYLPPLT E + KQVDY++ Sbjct: 19 TPNFPRATKNNKGFASNAAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILA 78 Query: 272 SKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEE 430 + W PCLEF+ + + + S Y D RYWTMWKLPMFGCTD +QVL+E++ Sbjct: 79 NSWTPCLEFAASDQAYAGNENCIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQA 138 Query: 431 VKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCEE 538 K +PDAY+R++ FD RQVQ F+ RPP + Sbjct: 139 CTKAFPDAYIRLVCFDANRQVQISGFLVHRPPSATD 174
>RBS_EUGGR (P16881) Ribulose bisphosphate carboxylase small chains, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunits) [Contains: Ribulose bisphosphate carboxylase small chain P1; Ribulose bisphosphate carboxylase small chain P2; Ribulose bispho Length = 1273 Score = 138 bits (348), Expect = 1e-32 Identities = 67/132 (50%), Positives = 84/132 (63%), Gaps = 7/132 (5%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVF-------RE 325 M+VW KKFET SYLPPL+ + KQVD +I PCLEF+ F R Sbjct: 997 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 1056 Query: 326 HNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVS 505 ++ GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++ YP YVR+ FD+++QVQ +S Sbjct: 1057 SGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVIS 1116 Query: 506 FIAFRPPGCEES 541 F+ RP G S Sbjct: 1117 FVVQRPSGSSSS 1128 Score = 138 bits (348), Expect = 1e-32 Identities = 67/132 (50%), Positives = 84/132 (63%), Gaps = 7/132 (5%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVF-------RE 325 M+VW KKFET SYLPPL+ + KQVD +I PCLEF+ F R Sbjct: 709 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 768 Query: 326 HNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVS 505 ++ GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++ YP YVR+ FD+++QVQ +S Sbjct: 769 SGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVIS 828 Query: 506 FIAFRPPGCEES 541 F+ RP G S Sbjct: 829 FVVQRPSGSSSS 840 Score = 138 bits (348), Expect = 1e-32 Identities = 67/132 (50%), Positives = 84/132 (63%), Gaps = 7/132 (5%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVF-------RE 325 M+VW KKFET SYLPPL+ + KQVD +I PCLEF+ F R Sbjct: 566 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 625 Query: 326 HNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVS 505 ++ GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++ YP YVR+ FD+++QVQ +S Sbjct: 626 SGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVIS 685 Query: 506 FIAFRPPGCEES 541 F+ RP G S Sbjct: 686 FVVQRPSGSSSS 697 Score = 138 bits (348), Expect = 1e-32 Identities = 67/132 (50%), Positives = 84/132 (63%), Gaps = 7/132 (5%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVF-------RE 325 M+VW KKFET SYLPPL+ + KQVD +I PCLEF+ F R Sbjct: 279 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 338 Query: 326 HNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVS 505 ++ GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++ YP YVR+ FD+++QVQ +S Sbjct: 339 SGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVIS 398 Query: 506 FIAFRPPGCEES 541 F+ RP G S Sbjct: 399 FVVQRPSGSSSS 410 Score = 138 bits (348), Expect = 1e-32 Identities = 67/132 (50%), Positives = 84/132 (63%), Gaps = 7/132 (5%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVF-------RE 325 M+VW KKFET SYLPPL+ + KQVD +I PCLEF+ F R Sbjct: 135 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 194 Query: 326 HNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVS 505 ++ GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++ YP YVR+ FD+++QVQ +S Sbjct: 195 SGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVIS 254 Query: 506 FIAFRPPGCEES 541 F+ RP G S Sbjct: 255 FVVQRPSGSSSS 266 Score = 136 bits (343), Expect = 5e-32 Identities = 66/132 (50%), Positives = 83/132 (62%), Gaps = 7/132 (5%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVF-------RE 325 M+VW KKFET SYLPPL+ + KQVD +I PCLEF+ F R Sbjct: 422 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 481 Query: 326 HNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVS 505 ++ GYYD YWTMWKLPMFGCTDA+QVL E+ E ++ YP YVR+ FD+++QVQ +S Sbjct: 482 SGTAAGYYDNHYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVIS 541 Query: 506 FIAFRPPGCEES 541 F+ RP G S Sbjct: 542 FVVQRPSGSSSS 553 Score = 135 bits (340), Expect = 1e-31 Identities = 65/126 (51%), Positives = 82/126 (65%), Gaps = 7/126 (5%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVF-------RE 325 M+VW KKFET SYLPPL+ + KQVD +I PCLEF+ F R Sbjct: 1141 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 1200 Query: 326 HNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVS 505 ++ GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++ YP YVR+ FD+++QVQ +S Sbjct: 1201 SGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVIS 1260 Query: 506 FIAFRP 523 F+ RP Sbjct: 1261 FVVQRP 1266 Score = 134 bits (337), Expect = 2e-31 Identities = 67/132 (50%), Positives = 84/132 (63%), Gaps = 7/132 (5%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVF-------RE 325 M+VW KKFET SYLPPL+ + KQVD +I PCLEF+ F R Sbjct: 854 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 913 Query: 326 HNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVS 505 ++ GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++ YP YVR + FD+++QVQ +S Sbjct: 914 SGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVR-LAFDSVKQVQVIS 972 Query: 506 FIAFRPPGCEES 541 F+ RP G S Sbjct: 973 FVVQRPSGSSSS 984
>RBS_SINAL (P13951) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) (Fragment) Length = 82 Score = 137 bits (346), Expect = 2e-32 Identities = 57/73 (78%), Positives = 68/73 (93%) Frame = +2 Query: 308 GFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLR 487 GFV+REH S+PGYYDGRYWTMWKLP+FGCTD+ QVL EV+E KKEYP+A++RIIGFDN R Sbjct: 5 GFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNR 64 Query: 488 QVQCVSFIAFRPP 526 QVQC+SFIA++PP Sbjct: 65 QVQCISFIAYKPP 77
>RBS1_CHLRE (P00873) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 185 Score = 137 bits (346), Expect = 2e-32 Identities = 70/169 (41%), Positives = 93/169 (55%), Gaps = 7/169 (4%) Frame = +2 Query: 38 AVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFETLSY 217 AV+A S+ + A + +S+ + M VW K FET SY Sbjct: 3 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 62 Query: 218 LPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWK 376 LPPLT E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWK Sbjct: 63 LPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWK 122 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 LPMFGC D QVL E+ K +PDAYVR++ FDN +QVQ + F+ RP Sbjct: 123 LPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRP 171
>RBS6_ACECL (Q38692) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) (rbcS4) Length = 182 Score = 136 bits (343), Expect = 5e-32 Identities = 67/133 (50%), Positives = 83/133 (62%), Gaps = 7/133 (5%) Frame = +2 Query: 161 RCMQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEF--SKVGFVFREHNS 334 R M VW K FET SYLPPLT E + KQVDY++ + W PCLEF S + E+ Sbjct: 41 REMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCI 100 Query: 335 SPG-----YYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQC 499 + G Y D RYWTMWKLPMFGCTD +QVL E++ K +PDAY+R++ FD RQVQ Sbjct: 101 TMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLTEIQACTKAFPDAYIRLVCFDANRQVQI 160 Query: 500 VSFIAFRPPGCEE 538 F+ RPP + Sbjct: 161 SGFLVHRPPSATD 173
>RBS4_ACECL (P16132) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 182 Score = 136 bits (343), Expect = 5e-32 Identities = 64/133 (48%), Positives = 83/133 (62%), Gaps = 7/133 (5%) Frame = +2 Query: 161 RCMQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-- 334 R M VW K FET SYLPPLT E + KQVDY++ + W PCLEF+ + + + Sbjct: 41 REMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 100 Query: 335 -----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQC 499 + Y D RYWTMWKLPMFGCTD +QVL+E++ K +PDAY+R++ FD RQVQ Sbjct: 101 RMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQI 160 Query: 500 VSFIAFRPPGCEE 538 F+ RPP + Sbjct: 161 SGFLVHRPPSATD 173
>RBS3_ACEME (P16136) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 182 Score = 136 bits (342), Expect = 6e-32 Identities = 64/133 (48%), Positives = 84/133 (63%), Gaps = 7/133 (5%) Frame = +2 Query: 161 RCMQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-- 334 R M VW K FET S+LPPLT E + KQVDY++ + W PCLEF+ + + + Sbjct: 41 RGMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCI 100 Query: 335 -----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQC 499 + Y D RYWTMWKLPMFGCTDA+QVL+E++ K +PDAY+R++ FD RQVQ Sbjct: 101 RMGPVASTYQDNRYWTMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDANRQVQI 160 Query: 500 VSFIAFRPPGCEE 538 F+ RPP + Sbjct: 161 SGFLVHRPPSATD 173
>RBS2_CHLRE (P08475) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 185 Score = 135 bits (341), Expect = 8e-32 Identities = 69/174 (39%), Positives = 94/174 (54%), Gaps = 7/174 (4%) Frame = +2 Query: 38 AVMASSATTVAPFQGLKSTAGLPXXXXXXXXXXXXXXXXRIRCMQVWPIEGIKKFETLSY 217 AV+A S+ + A + +S+ + M VW K FET SY Sbjct: 3 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 62 Query: 218 LPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWK 376 LPPL+ E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWK Sbjct: 63 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 122 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCEE 538 LPMFGC D QVL E+ K +PDAYVR++ FDN +QVQ + F+ RP + Sbjct: 123 LPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKSARD 176
>RBS7_ACECL (Q38693) Ribulose bisphosphate carboxylase small chain 7,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 7) (rbcS1) Length = 183 Score = 135 bits (340), Expect = 1e-31 Identities = 63/133 (47%), Positives = 83/133 (62%), Gaps = 7/133 (5%) Frame = +2 Query: 161 RCMQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-- 334 R M VW K FET SYLPPLT E + KQVDY++ + W PCLEF+ + + + Sbjct: 42 RDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 101 Query: 335 -----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQC 499 + Y D RYWTMWKLPMFGCTD +QVL++++ K +PDAY+R++ FD RQVQ Sbjct: 102 RMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSDMQACTKAFPDAYIRLVCFDANRQVQI 161 Query: 500 VSFIAFRPPGCEE 538 F+ RPP + Sbjct: 162 CGFLVHRPPSATD 174
>RBS1_ACEME (P16134) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 182 Score = 135 bits (339), Expect = 1e-31 Identities = 63/133 (47%), Positives = 83/133 (62%), Gaps = 7/133 (5%) Frame = +2 Query: 161 RCMQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-- 334 R M VW K FET S+LPPLT E + KQVDY++ + W PCLEF+ + + + Sbjct: 41 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCI 100 Query: 335 -----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQC 499 + Y D RYWTMWKLPMFGCTD +QVL+E++ K +PDAY+R++ FD RQVQ Sbjct: 101 RMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQI 160 Query: 500 VSFIAFRPPGCEE 538 F+ RPP + Sbjct: 161 SGFLVHRPPSATD 173
>RBS2_ACEME (P16135) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) (Fragment) Length = 173 Score = 135 bits (339), Expect = 1e-31 Identities = 63/133 (47%), Positives = 83/133 (62%), Gaps = 7/133 (5%) Frame = +2 Query: 161 RCMQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-- 334 R M VW K FET S+LPPLT E + KQVDY++ + W PCLEF+ + + + Sbjct: 32 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCI 91 Query: 335 -----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQC 499 + Y D RYWTMWKLPMFGCTD +QVL+E++ K +PDAY+R++ FD RQVQ Sbjct: 92 RMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQI 151 Query: 500 VSFIAFRPPGCEE 538 F+ RPP + Sbjct: 152 SGFLVHRPPSATD 164
>RBS_BATOE (P26985) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 175 Score = 134 bits (338), Expect = 2e-31 Identities = 63/128 (49%), Positives = 80/128 (62%), Gaps = 7/128 (5%) Frame = +2 Query: 161 RCMQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSS- 337 R M VW K FET SYLPPLT + + KQVDY++R+ W PCLEF+ + H+++ Sbjct: 34 RAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQAYVTHDNTV 93 Query: 338 ------PGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQC 499 Y D RYWTMWKLPMFGC D +QVL E+ K +PDAY+R++ FD RQVQ Sbjct: 94 RMGDCASTYQDNRYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIRLVCFDANRQVQI 153 Query: 500 VSFIAFRP 523 F+ RP Sbjct: 154 SGFLVHRP 161
>RBS5_ACEME (P16138) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 183 Score = 133 bits (335), Expect = 4e-31 Identities = 62/133 (46%), Positives = 82/133 (61%), Gaps = 7/133 (5%) Frame = +2 Query: 161 RCMQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-- 334 R M VW K FET S+LPPLT E + KQVDY++ + W PCLEF+ + + + Sbjct: 42 RDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 101 Query: 335 -----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQC 499 + Y D RYWTMWKLPMFGCTD +QVL+E++ +PDAY+R++ FD RQVQ Sbjct: 102 RMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQI 161 Query: 500 VSFIAFRPPGCEE 538 F+ RPP + Sbjct: 162 SGFLVHRPPSATD 174
>RBS4_ACEME (P16137) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 182 Score = 133 bits (334), Expect = 5e-31 Identities = 62/133 (46%), Positives = 82/133 (61%), Gaps = 7/133 (5%) Frame = +2 Query: 161 RCMQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-- 334 R M VW K FET S+LPPLT E + KQVDY++ + W PCLEF+ + + + Sbjct: 41 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 100 Query: 335 -----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQC 499 + Y D RYWTMWKLPMFGCTD +QVL+E++ +PDAY+R++ FD RQVQ Sbjct: 101 RMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQI 160 Query: 500 VSFIAFRPPGCEE 538 F+ RPP + Sbjct: 161 SGFLVHRPPSATD 173
>RBS1_ACECL (P16129) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) (Fragment) Length = 126 Score = 125 bits (313), Expect = 1e-28 Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 7/116 (6%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTM 370 SYLPPLT E + KQVDY++ + W PCLEF+ + +++ + Y D RYWTM Sbjct: 2 SYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWTM 61 Query: 371 WKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGCEE 538 WKLPMFGCTD +QVL+E++ K +PDAY+R++ FD RQVQ F+ RPP + Sbjct: 62 WKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPPSATD 117
>RBS_SYNP2 (Q44178) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 111 Score = 108 bits (271), Expect = 1e-23 Identities = 48/110 (43%), Positives = 75/110 (68%) Frame = +2 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 K++ETLSYLPPL+ + + +QV Y++ ++P +EF K + +P + +WT+W Sbjct: 8 KRYETLSYLPPLSDQQIARQVQYMMDQGYIPGIEFEK--------DPTPELH---HWTLW 56 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 KLP+F + A +VLNEV E + EY D Y+R++GFDN++Q Q VSFI ++P Sbjct: 57 KLPLFNASSAQEVLNEVRECRSEYSDCYIRVVGFDNIKQCQTVSFIVYKP 106
>RBS_PROHO (P27569) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 109 Score = 107 bits (268), Expect = 2e-23 Identities = 46/110 (41%), Positives = 76/110 (69%) Frame = +2 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 +++ETLSYLPPL+ + + +Q++Y++R ++P +EF++ + +++ Y WTMW Sbjct: 8 RRYETLSYLPPLSDQQIARQIEYMVREGYIPAVEFNE------DSDATTCY-----WTMW 56 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 KLP+F T +VL EV E + EYP+ Y+R++GFDN++Q Q VSFI +P Sbjct: 57 KLPLFHATSTQEVLGEVRECRTEYPNCYIRVVGFDNIKQCQSVSFIVHKP 106
>RBS_SYNP6 (P04716) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 110 Score = 107 bits (267), Expect = 3e-23 Identities = 50/110 (45%), Positives = 70/110 (63%) Frame = +2 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 ++FET SYLPPL+ + Q++Y+I + P +EF+ EH++ +Y WTMW Sbjct: 9 RRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFN-------EHSNPEEFY----WTMW 57 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 KLP+F C QVL+EV E + EY D Y+R+ GFDN++Q Q VSFI RP Sbjct: 58 KLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKQCQTVSFIVHRP 107
>RBS_SYNY3 (P54206) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 113 Score = 105 bits (261), Expect = 2e-22 Identities = 50/110 (45%), Positives = 72/110 (65%) Frame = +2 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 +++ETLSYLPPLT + + KQV++L+ ++P +EF E + P + +WTMW Sbjct: 8 RRYETLSYLPPLTDQQIAKQVEFLLDQGFIPGVEF--------EEDPQP---ETHFWTMW 56 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 KLP FG A +VL EV E + E P+ Y+R+IGFDN++Q Q VSFI +P Sbjct: 57 KLPFFGGATANEVLAEVRECRSENPNCYIRVIGFDNIKQCQTVSFIVHKP 106
>RBS_ANASP (P06514) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 109 Score = 104 bits (260), Expect = 2e-22 Identities = 51/119 (42%), Positives = 76/119 (63%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGY 346 MQ P E +++ETLSYLPPLT + KQV Y++ ++P +EF++V S P Sbjct: 1 MQTLPKE--RRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFNEV--------SEPTE 50 Query: 347 YDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 YWT+WKLP+FG + +VL EV+ + +YP Y+R++GFDN++Q Q +SFI +P Sbjct: 51 L---YWTLWKLPLFGAKTSREVLAEVQSCRSQYPGHYIRVVGFDNIKQCQILSFIVHKP 106
>RBS_CYAPA (P18062) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 106 Score = 98.2 bits (243), Expect = 2e-20 Identities = 41/110 (37%), Positives = 70/110 (63%) Frame = +2 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 +KFET SYLPPL + + +Q+ Y + + + P +EFS G + WT+W Sbjct: 7 RKFETFSYLPPLNDQQIARQLQYALSNGYSPAIEFSFTGKA-----------EDLVWTLW 55 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 KLP+FG +VL+E++ K+++P+AY+R++ FD++RQVQ + F+ ++P Sbjct: 56 KLPLFGAQSPEEVLSEIQACKQQFPNAYIRVVAFDSIRQVQTLMFLVYKP 105
>RBS2_THIFE (Q07088) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) Length = 118 Score = 93.6 bits (231), Expect = 5e-19 Identities = 46/108 (42%), Positives = 61/108 (56%) Frame = +2 Query: 197 KFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWK 376 KFETLSYLP LT + + +QV Y++ W P +E ++ F G YW MWK Sbjct: 18 KFETLSYLPALTADEIRQQVAYIVSKGWNPAVEHTEPENAF-----------GNYWYMWK 66 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFR 520 LPMFG TD +L E E K P +VRI+G+DN +Q Q S + +R Sbjct: 67 LPMFGETDVDTILKEAERCHKRNPHNHVRIVGYDNFKQSQGTSLVVYR 114
>RBS_ALVHS (P24682) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 121 Score = 92.8 bits (229), Expect = 8e-19 Identities = 47/111 (42%), Positives = 61/111 (54%) Frame = +2 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 +KFET SYLP L E + KQV+Y++ W P +E H +D YW MW Sbjct: 17 RKFETFSYLPELGVEKIRKQVEYIVSKGWNPAVE----------HTEPENAFD-HYWYMW 65 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 526 KLPMFG TD +L E E K +P +VR+IG+DN Q Q + + FR P Sbjct: 66 KLPMFGETDVDAILAEAEACHKAHPSHHVRLIGYDNYAQSQGTAMVIFRGP 116
>RBS_PSEHY (Q51857) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 124 Score = 92.8 bits (229), Expect = 8e-19 Identities = 41/110 (37%), Positives = 65/110 (59%) Frame = +2 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 K+FET SYLP ++ E + KQ++Y++ W P +E + P YW MW Sbjct: 24 KRFETFSYLPQMSAEEIRKQIEYIVSKGWNPAIE-----------HCEPENAILHYWYMW 72 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 KLPMFG TD +++ E+E K+ P+ +++IG+DN+RQ Q + + +RP Sbjct: 73 KLPMFGETDVDKIIAEIEACKRSNPNHLIKLIGYDNIRQTQGTAMLVYRP 122
>RBS2_ACECL (P16130) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) (Fragment) Length = 86 Score = 90.5 bits (223), Expect = 4e-18 Identities = 38/68 (55%), Positives = 48/68 (70%) Frame = +2 Query: 335 SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIA 514 S Y D RYWTMWKLPMFGCTD +QVL+E++ K +PDAY+R++ FD RQVQ F+ Sbjct: 10 SSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLV 69 Query: 515 FRPPGCEE 538 RPP + Sbjct: 70 HRPPSATD 77
>RBS1_CHRVI (P22850) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 117 Score = 88.6 bits (218), Expect = 2e-17 Identities = 43/109 (39%), Positives = 60/109 (55%) Frame = +2 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 +KFET SYLP + + + KQV+Y++ W P +E H +D YW MW Sbjct: 16 RKFETFSYLPRMDADRIRKQVEYIVSKGWNPAIE----------HTEPENAFD-HYWYMW 64 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFR 520 KLPMFG TD +L E E K +P+ +VR+IGFDN Q + + +R Sbjct: 65 KLPMFGETDIDTILKEAEACHKAHPNNHVRLIGFDNYAQSKGAEMVVYR 113
>RBS_THIDA (Q56260) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 118 Score = 88.6 bits (218), Expect = 2e-17 Identities = 42/109 (38%), Positives = 61/109 (55%) Frame = +2 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 +KFET SYLP + + KQV+YL+ W P +E ++ P + YW MW Sbjct: 17 RKFETFSYLPAMNAADIRKQVEYLVSKGWNPAIE-----------HTEPEHLMDSYWYMW 65 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFR 520 KLPMFG TD ++L E E K P+ +VR++G+DN Q Q + + +R Sbjct: 66 KLPMFGETDIDRILGEAEACHKANPNNHVRLVGYDNFAQSQGAAMVIYR 114
>RBS2_CHRVI (P22860) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) Length = 113 Score = 88.2 bits (217), Expect = 2e-17 Identities = 44/111 (39%), Positives = 63/111 (56%) Frame = +2 Query: 191 IKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTM 370 I ++ET SYLPPL E +L+Q+ Y++ + W LE EH Y YW M Sbjct: 13 IGRYETFSYLPPLNREEILEQILYILDNGWNASLE--------HEHPDRAFEY---YWPM 61 Query: 371 WKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRP 523 WK+P FG D +L E+E ++ YPD +VR++G+D Q + SF+A RP Sbjct: 62 WKMPFFGEQDPNVILTEIESCRRSYPDHHVRLVGYDTYAQSKGHSFLAHRP 112
>RBS1_HYDMR (Q59459) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 117 Score = 85.9 bits (211), Expect = 1e-16 Identities = 46/109 (42%), Positives = 61/109 (55%) Frame = +2 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 +K ET SYLP +TT+ + QV+Y+I W P +E S+ F YW MW Sbjct: 17 RKAETFSYLPKMTTDQIKAQVEYIISKGWNPAIEHSEPENAF-----------SYYWYMW 65 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFR 520 KLPMFG TDA VL EV+ K P+ +VR+IG+DN Q Q + + R Sbjct: 66 KLPMFGDTDANVVLAEVDACIKANPNNHVRLIGYDNYAQSQGANMLVKR 114
>RBS_NITVU (Q59614) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 108 Score = 84.3 bits (207), Expect = 3e-16 Identities = 41/118 (34%), Positives = 63/118 (53%) Frame = +2 Query: 167 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGY 346 M V +KK+ET SYLP +T E + +Q+ + I W P +E ++ G + Sbjct: 1 MAVQAYRSLKKYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVEHTEKGTPAK-------- 52 Query: 347 YDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFR 520 YW MWKLP+FG V+ E+E +E+PD VR + +DN Q Q ++F+ +R Sbjct: 53 --ASYWYMWKLPLFGEQSVDAVVAEIEACHREFPDQMVRFVAYDNYAQSQGMAFVVYR 108
>RBS2_HYDMR (Q59461) Ribulose bisphosphate carboxylase small chain 2 (EC| 4.1.1.39) (RuBisCO small subunit 2) Length = 122 Score = 82.4 bits (202), Expect = 1e-15 Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Frame = +2 Query: 203 ETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLP 382 ET S+LP T + + Q+ Y+I W P LE + +P YW MWKLP Sbjct: 15 ETFSFLPEFTADEIYDQIVYIINQGWTPALE-----------HEAPEAASSHYWGMWKLP 63 Query: 383 MFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG-CEESG 544 MFG D VL E+++ + YP+ +R+IG+DN Q Q +F F G C G Sbjct: 64 MFGTRDPNAVLAEIDQCRAAYPNHMIRLIGYDNYTQCQGHNFCRFTVLGECNSHG 118
>RBS1_THIFE (P28896) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 110 Score = 78.6 bits (192), Expect = 2e-14 Identities = 40/108 (37%), Positives = 57/108 (52%) Frame = +2 Query: 197 KFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWK 376 K+ET SYLP + E + +Q+ YLI W P +E + P YW MWK Sbjct: 12 KYETFSYLPAMGPEKMRRQIAYLINQGWNPGIE-----------HVEPERASTYYWYMWK 60 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFR 520 LPMFG V+ E+E + +P +VR++G+DN Q Q +F+ FR Sbjct: 61 LPMFGEQSVDTVIMELEACHRAHPGHHVRLVGYDNYSQSQGSAFVVFR 108
>RBS_RHOCA (O32741) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 118 Score = 78.6 bits (192), Expect = 2e-14 Identities = 38/109 (34%), Positives = 61/109 (55%) Frame = +2 Query: 194 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 373 +K T SYLPP+ + +QV++++++ W P +E ++ P + YW MW Sbjct: 17 RKMGTFSYLPPMGEAEIRRQVEWIVKNGWNPGIE-----------HTEPDFAAQIYWYMW 65 Query: 374 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFR 520 KLPMFG TD +L E++ + P +VR+IG+DN Q Q + I +R Sbjct: 66 KLPMFGETDVDAILAELKACHEANPGHHVRLIGYDNFTQSQGANMIVYR 114
>RBS_THINE (P45686) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 110 Score = 77.0 bits (188), Expect = 5e-14 Identities = 39/108 (36%), Positives = 57/108 (52%) Frame = +2 Query: 197 KFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWK 376 K+ET SYLPP+ E + Q+ Y I W P +E +V NS +YW MWK Sbjct: 12 KYETFSYLPPMNAERIRAQIKYAIAQGWSPGIEHVEV------KNSM-----NQYWYMWK 60 Query: 377 LPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFR 520 LP FG + VL E+E + YP V+++ +DN Q ++F+ +R Sbjct: 61 LPFFGEQNVDNVLAEIEACRSAYPTHQVKLVAYDNYAQSLGLAFVVYR 108
>RBS_SYNPX (P0A4S5) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 113 Score = 76.6 bits (187), Expect = 6e-14 Identities = 37/109 (33%), Positives = 55/109 (50%) Frame = +2 Query: 191 IKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTM 370 + ET +LPP+T + + Q+ Y+I W P +E + P YW+ Sbjct: 13 VATLETFGFLPPMTQDEIYDQIAYIIAQGWSPLVE-----------HVHPSNSMATYWSY 61 Query: 371 WKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAF 517 WKLP FG D V++E+E + YPD +VRI+G+D Q Q F+ F Sbjct: 62 WKLPFFGEKDLNVVVSELEACHRAYPDHHVRIVGYDAYTQSQGACFVVF 110
>RBS_SYNPW (P0A4S6) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 113 Score = 76.6 bits (187), Expect = 6e-14 Identities = 37/109 (33%), Positives = 55/109 (50%) Frame = +2 Query: 191 IKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTM 370 + ET +LPP+T + + Q+ Y+I W P +E + P YW+ Sbjct: 13 VATLETFGFLPPMTQDEIYDQIAYIIAQGWSPLVE-----------HVHPSNSMATYWSY 61 Query: 371 WKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAF 517 WKLP FG D V++E+E + YPD +VRI+G+D Q Q F+ F Sbjct: 62 WKLPFFGEKDLNVVVSELEACHRAYPDHHVRIVGYDAYTQSQGACFVVF 110
>RBS_GUITH (P14960) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 70.1 bits (170), Expect = 6e-12 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 2/110 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 S+LP LT E ++KQ+ Y I W +E++ + YW +W LP+FG Sbjct: 9 SFLPDLTDEQIVKQIQYAISKNWALNVEWT-----------DDPHPRNAYWDLWGLPLFG 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQ--CVSFIAFRPPGCE 535 D V+ E+ +K P YV++ FDN R V+ C+SFI RP E Sbjct: 58 IKDPAAVMFEINACRKAKPACYVKVNAFDNSRGVESCCLSFIVQRPTSNE 107
>RBS_CYAME (O22024) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 69.7 bits (169), Expect = 7e-12 Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 385 T YLP LT E + KQ+ Y I W +E++ + YW MW LP+ Sbjct: 7 TFCYLPDLTDEQIRKQIQYAINQGWAVSVEYT-----------DDPHPRNSYWEMWGLPL 55 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQ--CVSFIAFRP 523 F D ++ EV+E +K++P+ Y++++ F++ + ++ +SFI RP Sbjct: 56 FDVKDPATIMFEVQECRKQFPNHYIKVLAFNSTKGIESTALSFIVNRP 103
>RBS_ANTSP (P25458) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 69.3 bits (168), Expect = 1e-11 Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 5/115 (4%) Frame = +2 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 385 T S+LP LT E + KQ+ Y + W +EF+ + YW +W LP+ Sbjct: 7 TFSFLPDLTDEQIKKQIAYAVSQNWAINIEFT-----------DDPHPRNNYWELWGLPL 55 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQ-CV-SFIAFRP---PGCE 535 F D V+ E+E +K++ Y++I FDN R V+ CV SFI RP PG E Sbjct: 56 FDINDVESVMYELESCRKQHSGLYIKINAFDNTRGVESCVLSFIINRPSYEPGFE 110
>RBS_BRAJA (Q9ZI33) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 134 Score = 68.9 bits (167), Expect = 1e-11 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 2/107 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 S+LP LT + + KQV Y + W +EF+ + YW MW LPMF Sbjct: 9 SFLPDLTDDQIYKQVQYCLAKGWAVNIEFT-----------DDPHPRNTYWEMWGLPMFD 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCV--SFIAFRPP 526 DA V+ E+ E ++ Y D Y+RI GFD+ + V SF+ RPP Sbjct: 58 LQDAAGVMMELAECRRVYGDRYIRISGFDSSPGWESVRISFLVNRPP 104
>RBS_PORAE (Q09125) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 68.9 bits (167), Expect = 1e-11 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 2/108 (1%) Frame = +2 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 385 T S+LP LT + KQV Y + KW +E++ + +W +W LP+ Sbjct: 7 TFSFLPDLTDAQIQKQVQYAVSKKWAVSVEYT-----------DDPHPRNSFWELWGLPL 55 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQ--CVSFIAFRP 523 F DA+ ++ E+ +K P+ Y+++ FDN R V+ C+SFI RP Sbjct: 56 FDVKDASALMYEIAACRKAKPNYYIKVNAFDNTRGVESCCLSFIINRP 103
>RBS1_RHOSH (P27998) Ribulose bisphosphate carboxylase small chain 1 (EC| 4.1.1.39) (RuBisCO small subunit 1) Length = 129 Score = 67.8 bits (164), Expect = 3e-11 Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 2/106 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 S+LP LT E + QVDY + W LE H P + YW MW +PMF Sbjct: 9 SFLPDLTDEQISAQVDYCLGRGWAVSLE----------HTDDP-HPRNTYWEMWGMPMFD 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCV--SFIAFRP 523 D V+ E++E +K +P Y+RI FD+ R + V SFI RP Sbjct: 58 LRDPKGVMIELDECRKAWPGRYIRINAFDSTRGFETVTMSFIVNRP 103
>RBSC_RALEU (P09658) Ribulose bisphosphate carboxylase small chain, chromosomal| (EC 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 67.0 bits (162), Expect = 5e-11 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 2/108 (1%) Frame = +2 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 385 T S+LP LT E + KQ++Y + W LE++ + YW M+ LPM Sbjct: 7 TFSFLPELTDEQITKQLEYCLNQGWAVGLEYT-----------DDPHPRNTYWEMFGLPM 55 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCV--SFIAFRP 523 F DA +L E+ + +P+ Y+R+ FD+ V+ V SFI RP Sbjct: 56 FDLRDAAGILMEINNARNTFPNHYIRVTAFDSTHTVESVVMSFIVNRP 103
>RBS_GALSU (P23756) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 65.9 bits (159), Expect = 1e-10 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = +2 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 385 T S+LP LT E + KQ+DY+I K +E++ NS +W MW LP+ Sbjct: 7 TFSFLPDLTDEQIKKQIDYMISKKLAIGIEYTND---IHPRNS--------FWEMWGLPL 55 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQ--CVSFIAFRP 523 F TD VL E+ +K + Y++++GF + R ++ +SFI RP Sbjct: 56 FEVTDPAPVLFEINACRKAKSNFYIKVVGFSSERGIESTIISFIVNRP 103
>RBS_CYACA (P37394) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 64.7 bits (156), Expect = 2e-10 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 2/108 (1%) Frame = +2 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 385 T S+LP LT + + KQ+ Y I W +E++ + YW MW LP+ Sbjct: 7 TFSFLPDLTNDQIRKQIQYAINKGWALSVEYT-----------DDPHPRNSYWEMWGLPL 55 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQ--CVSFIAFRP 523 F D ++ EVE +KE + Y++++ FD+ + V+ +SF+ RP Sbjct: 56 FDVKDPAAIMFEVEACRKEKSNYYIKLLAFDSTKGVESTAMSFMVNRP 103
>RBS2_RHIME (P56890) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 129 Score = 64.3 bits (155), Expect = 3e-10 Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 S+LP LT E + QV+Y + W +E++ + YW MW PMF Sbjct: 9 SFLPDLTDEQITAQVEYCLGRGWAIGVEYT-----------DDPHPRNTYWEMWGNPMFD 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCV--SFIAFRP 523 DA V+ EVE+ +K +P Y+R+ FD+ R ++ V SFI RP Sbjct: 58 LRDAKGVMMEVEDCRKAHPQDYIRLNAFDSSRGLETVTMSFIVNRP 103
>RBS_PLECA (Q08052) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 62.8 bits (151), Expect = 9e-10 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 S+LP LT + KQ+ Y + W +E++ + YW MW LP+F Sbjct: 9 SFLPDLTDAQVTKQIQYALNKSWAISIEYT-----------DDPHPRNSYWEMWGLPLFD 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQ-CV-SFIAFRP 523 D +L E+ +K P+ Y++I FDN R ++ CV SFI RP Sbjct: 58 VKDPAAILFEINMARKAKPNYYLKIACFDNTRGIESCVLSFIVQRP 103
>RBS_XANFL (P23012) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 133 Score = 62.8 bits (151), Expect = 9e-10 Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 2/108 (1%) Frame = +2 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 385 T S+LP LT + Q+ Y + W +E++ + YW MW LPM Sbjct: 7 TFSFLPDLTAAQVKAQIQYALDQNWAVSVEYT-----------DDPHPRNTYWEMWGLPM 55 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCV--SFIAFRP 523 F DA V EVE + +P YVR+ FD+ R + V SFI RP Sbjct: 56 FDLRDAAGVYGEVEACRTAHPGKYVRVNAFDSNRGWETVRLSFIVQRP 103
>RBS1_RHIME (P58349) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 129 Score = 62.8 bits (151), Expect = 9e-10 Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 2/106 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 S+LP LT E + QV Y + W +E++ + YW MW PMF Sbjct: 9 SFLPDLTDEQITAQVQYCLGKGWAIGVEYT-----------DDPHPRNTYWEMWGNPMFD 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCV--SFIAFRP 523 DA V+ E+E+ +K +P Y+R+ FD+ R ++ V SFI RP Sbjct: 58 LKDAKGVMMELEDCRKAHPQDYIRLNAFDSSRGLETVTMSFIVNRP 103
>RBSP_RALEU (Q59102) Ribulose bisphosphate carboxylase small chain, plasmid (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 61.6 bits (148), Expect = 2e-09 Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 2/108 (1%) Frame = +2 Query: 206 TLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPM 385 T S+LP LT + Q++Y + W +E++ + YW M+ LPM Sbjct: 7 TFSFLPDLTDAQITSQLEYCLNQGWAVGIEYT-----------DDPHPRNTYWEMFGLPM 55 Query: 386 FGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCV--SFIAFRP 523 F DA +L E+ + +P+ Y+R+ FD+ V+ V SFI RP Sbjct: 56 FDLRDAAGILLEINNARSTFPNHYIRVTAFDSTHTVESVVMSFIVNRP 103
>RBS_PORPU (P51227) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 138 Score = 60.8 bits (146), Expect = 3e-09 Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 S+LP LT + + KQ+ Y++ W +E++ + YW +W LP+F Sbjct: 9 SFLPDLTDQQINKQLAYIVSKGWSANVEYT-----------DDPHPRNAYWELWGLPLFD 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQ--CVSFIAFRP 523 D V+ E+ +K P YV++ FDN R V+ +SFI RP Sbjct: 58 VKDPAAVMYEINSCRKAKPSYYVKVNAFDNTRGVESCSMSFIVNRP 103
>RBS_OLILU (P14961) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 60.5 bits (145), Expect = 4e-09 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 SYLP LT ++KQ+DY + W +E++ + YW +W LP+F Sbjct: 9 SYLPDLTDAQIIKQIDYCLSRGWSVGVEWT-----------DDPHPRNAYWELWGLPLFD 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFDNLR--QVQCVSFIAFRP 523 D++ +L EV E ++ P+ Y++++ F+ R + +FI RP Sbjct: 58 VKDSSAILYEVNECRRLNPEGYIKLVAFNAARGTESSASAFIVQRP 103
>RBS_CYLSN (P24683) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 56.2 bits (134), Expect = 8e-08 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 2/106 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 S+LP LT E + KQV+Y I W +E++ + YW +W LP+F Sbjct: 9 SFLPDLTDEQIEKQVNYAISKGWAMNVEWT-----------DDPHPRNNYWELWGLPLFD 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFD-NLRQVQCV-SFIAFRP 523 D V+ E++E +K Y+R+ FD + CV SFI RP Sbjct: 58 IKDPASVMFELQEARKACAAGYIRMNAFDASYGTESCVMSFIVNRP 103
>RBS_ECTSI (P24395) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 55.1 bits (131), Expect = 2e-07 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 S+LP L+ + + +QV Y + W +E++ + YW +W LP+F Sbjct: 9 SFLPDLSDDQIKQQVSYAMSKGWAVSVEWT-----------DDPHPRNSYWELWGLPLFD 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFD-NLRQVQCV-SFIAFRP 523 D V+ E+ E +K P+ Y++I FD ++ CV SFI RP Sbjct: 58 VKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRP 103
>RBS_PYLLI (P23652) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 54.7 bits (130), Expect = 2e-07 Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 2/106 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 S+LP L+ E + QV Y + W +E++ + YW +W LP+F Sbjct: 9 SFLPDLSDEQIKLQVGYAMSKGWAVSVEWT-----------DDPHPRNSYWELWGLPLFD 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFD-NLRQVQCV-SFIAFRP 523 D V+ E+ E +K P+ Y++I FD ++ CV SFI RP Sbjct: 58 VKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRP 103
>RBS_THANO (O98948) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 54.3 bits (129), Expect = 3e-07 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 2/106 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 S+LP LT + KQV Y + W +E++ + YW +W LP+F Sbjct: 9 SFLPDLTDTQIEKQVAYAMNKGWAMNVEWT-----------DDPHPRNNYWELWGLPLFD 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQ-CV-SFIAFRP 523 D V+ E+ E +K Y+RI FD V+ CV SFI RP Sbjct: 58 IKDPATVMFELNEARKSCASGYIRINAFDASYGVESCVMSFITNRP 103
>RBS_ODOSI (P49521) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 53.9 bits (128), Expect = 4e-07 Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 2/106 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 S+LP LT + + KQ+ Y I W +E++ + YW +W LP+F Sbjct: 9 SFLPDLTDQQIEKQIAYCIDKGWAMNVEWT-----------DDPHPRNSYWELWGLPLFD 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFD-NLRQVQCV-SFIAFRP 523 D V+ E+ E +K + Y+R+ FD + CV SFI RP Sbjct: 58 IKDIASVMFELSEARKSCANGYIRMNAFDASYGTESCVMSFIVSRP 103
>RBS_DETCO (O98946) Ribulose bisphosphate carboxylase small chain (EC| 4.1.1.39) (RuBisCO small subunit) Length = 139 Score = 45.1 bits (105), Expect = 2e-04 Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 2/106 (1%) Frame = +2 Query: 212 SYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 S+LP LT E + KQV + G + + YW +W LP+F Sbjct: 9 SFLPDLTDEQIEKQVACAMSR-----------GLAMNVEWTDDPHPRNNYWELWGLPLFD 57 Query: 392 CTDATQVLNEVEEVKKEYPDAYVRIIGFD-NLRQVQCV-SFIAFRP 523 D V+ E+ E +K Y+R+ FD + CV SFI RP Sbjct: 58 IKDPATVMFELNEARKSCAAGYIRMNAFDASYGTESCVMSFITNRP 103
>CCMM_SYNP7 (Q03513) Carbon dioxide concentrating mechanism protein ccmM| Length = 539 Score = 31.2 bits (69), Expect = 2.9 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = +2 Query: 395 TDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 529 T+ QVL+E+E E+ YVR++G D + + + RP G Sbjct: 267 TNERQVLSELENCLSEHEGEYVRLLGIDTNTRSRVFEALIQRPDG 311
>PK1L1_MOUSE (Q8R526) Polycystic kidney disease 1-like 1 protein| (Polycystin-1L1) (Fragment) Length = 531 Score = 30.8 bits (68), Expect = 3.7 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Frame = +2 Query: 182 IEGIKKFETLSY--LPPLTTEALLKQVDYLI-RSKWVPCLEFSKVGFVFREHNSSPGY 346 + I +F++ + LP + + LL L+ +S++V C E GF+F E ++ PGY Sbjct: 12 VSSISEFQSHPHNLLPGIFSAFLLVLYGILVSKSRYVDCHEKKNPGFIFLEEDTLPGY 69
>TRPG_SERMA (P00900) Anthranilate synthase component II (EC 4.1.3.27)| (Glutamine amido-transferase) Length = 192 Score = 30.8 bits (68), Expect = 3.7 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +1 Query: 154 KDQVHAGVAD*GYQEVRDPVLLATPHHGGPPEAG*LPDPLQ 276 ++Q+ A V Q + PVL+ +P G P EAG +P+ LQ Sbjct: 31 RNQIGAEVIIERLQHMEQPVLMLSPGPGTPSEAGCMPELLQ 71
>NFIP1_RAT (Q5U2S1) NEDD4 family-interacting protein 1| Length = 221 Score = 30.4 bits (67), Expect = 4.9 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 275 KWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 KW+ + FS PGY+DG+YW W + G Sbjct: 159 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 188
>NFIP1_MOUSE (Q8R0W6) NEDD4 family-interacting protein 1 (NEDD4 WW| domain-binding protein 5) Length = 221 Score = 30.4 bits (67), Expect = 4.9 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 275 KWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 KW+ + FS PGY+DG+YW W + G Sbjct: 159 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 188
>NFIP1_HUMAN (Q9BT67) NEDD4 family-interacting protein 1 (NEDD4 WW| domain-binding protein 5) (Putative MAPK-activating protein PM13) (Putative NF-kappa-B-activating protein 164) (Putative NFKB and MAPK-activating protein) (Breast cancer-associated protein Length = 221 Score = 30.4 bits (67), Expect = 4.9 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 275 KWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 KW+ + FS PGY+DG+YW W + G Sbjct: 159 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 188
>NFIP1_BRARE (Q6DGP4) NEDD4 family-interacting protein 1| Length = 210 Score = 30.4 bits (67), Expect = 4.9 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 275 KWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 KW+ + FS PGY+DG+YW W + G Sbjct: 148 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 177
>NFIP1_XENLA (Q6GLN5) NEDD4 family-interacting protein 1| Length = 212 Score = 30.4 bits (67), Expect = 4.9 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 275 KWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 KW+ + FS PGY+DG+YW W + G Sbjct: 150 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 179
>NFIP1_XENTR (Q4V786) NEDD4 family-interacting protein 1| Length = 211 Score = 30.4 bits (67), Expect = 4.9 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 275 KWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFG 391 KW+ + FS PGY+DG+YW W + G Sbjct: 149 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 178
>TRPG_VIBPA (P22101) Anthranilate synthase component II (EC 4.1.3.27)| (Glutamine amido-transferase) Length = 196 Score = 30.0 bits (66), Expect = 6.4 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = +1 Query: 154 KDQVHAGVAD*GYQEVRDPVLLATPHHGGPPEAG*LPDPLQ 276 ++ + A + E+ +PV+L +P G P EAG +P+ +Q Sbjct: 32 RNHIPAETIEQAINELENPVVLLSPGPGAPSEAGSMPELIQ 72
>TRPG_YERPE (Q8ZEG6) Anthranilate synthase component II (EC 4.1.3.27)| (Glutamine amido-transferase) Length = 192 Score = 30.0 bits (66), Expect = 6.4 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 193 QEVRDPVLLATPHHGGPPEAG*LPDPLQ--VGALPRV 297 Q++ PVL+ +P G P +AG +P+ LQ G LP + Sbjct: 45 QQLEQPVLMLSPGPGTPAQAGCMPELLQRLQGQLPMI 81 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,604,706 Number of Sequences: 219361 Number of extensions: 1455579 Number of successful extensions: 4239 Number of sequences better than 10.0: 160 Number of HSP's better than 10.0 without gapping: 3966 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4068 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
