Clone Name | bah62k05 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_472878.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1167 Score = 531 bits (268), Expect = e-148 Identities = 457/520 (87%) Strand = Plus / Plus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 ||||| ||||||||||||||||||||| ||||||| ||||| ||||| ||| |||||||| Sbjct: 187 catggtcagaaggtcacatacttcctcaggccaatatgggagtctcctcccaagcccttc 246 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || | |||||||| |||||| |||||||||||||||||| ||| ||||||||||| ||| Sbjct: 247 aaaactatccctcattactaccatgagaatgtcaccatggcgaaactctgcaagttgcat 306 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 |||||||||||| ||||||||||||| ||||| ||||||||||| || ||||| |||||| Sbjct: 307 gggtggaaagtccgggagaccccacgacgtgtcttcgatgctgtactattcagcaatgag 366 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 || ||||| |||||| | |||||||||||||| ||||||||||| |||||||| || ||| Sbjct: 367 ctcgatattcttgaaatacgttggaatgaactaagcccctatgtctcagagtttgtgctg 426 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 |||||||| |||||||| |||||||| ||| |||||| || |||||||||||| || Sbjct: 427 cttgagtcgaactcaaccttcactggattgaaaaagcccctgcacttcaaggaaaatcgt 486 Query: 349 catcgatttagatttgctgaatcgcggctgacctatggcacatatgggggaagattcatg 408 ||||||||| ||||||||||||| |||||||| ||||| | ||||||||| ||| || Sbjct: 487 catcgatttggatttgctgaatcacggctgacatatggtatgattgggggaaggttcgtg 546 Query: 409 aagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttctt 468 ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 547 aagggagaaaacccatttgttgaggagtcatatcagagggttgccctggaccagcttatt 606 Query: 469 aggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatccca 528 | |||||||| ||| |||||||| ||| | |||||||||||||||||||||||||||||| Sbjct: 607 aagattgcaaaaatagaagatgatgacctgttgatcatgtcagatgttgatgaaatccca 666 Query: 529 agtggccacaccatcaatctcttgagatggtgcgacgaca 568 ||||||||||| || ||||| |||||||||||||||||| Sbjct: 667 agtggccacacaattgatctcctgagatggtgcgacgaca 706
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 531 bits (268), Expect = e-148 Identities = 457/520 (87%) Strand = Plus / Minus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 ||||| ||||||||||||||||||||| ||||||| ||||| ||||| ||| |||||||| Sbjct: 35075 catggtcagaaggtcacatacttcctcaggccaatatgggagtctcctcccaagcccttc 35016 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || | |||||||| |||||| |||||||||||||||||| ||| ||||||||||| ||| Sbjct: 35015 aaaactatccctcattactaccatgagaatgtcaccatggcgaaactctgcaagttgcat 34956 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 |||||||||||| ||||||||||||| ||||| ||||||||||| || ||||| |||||| Sbjct: 34955 gggtggaaagtccgggagaccccacgacgtgtcttcgatgctgtactattcagcaatgag 34896 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 || ||||| |||||| | |||||||||||||| ||||||||||| |||||||| || ||| Sbjct: 34895 ctcgatattcttgaaatacgttggaatgaactaagcccctatgtctcagagtttgtgctg 34836 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 |||||||| |||||||| |||||||| ||| |||||| || |||||||||||| || Sbjct: 34835 cttgagtcgaactcaaccttcactggattgaaaaagcccctgcacttcaaggaaaatcgt 34776 Query: 349 catcgatttagatttgctgaatcgcggctgacctatggcacatatgggggaagattcatg 408 ||||||||| ||||||||||||| |||||||| ||||| | ||||||||| ||| || Sbjct: 34775 catcgatttggatttgctgaatcacggctgacatatggtatgattgggggaaggttcgtg 34716 Query: 409 aagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttctt 468 ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 34715 aagggagaaaacccatttgttgaggagtcatatcagagggttgccctggaccagcttatt 34656 Query: 469 aggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatccca 528 | |||||||| ||| |||||||| ||| | |||||||||||||||||||||||||||||| Sbjct: 34655 aagattgcaaaaatagaagatgatgacctgttgatcatgtcagatgttgatgaaatccca 34596 Query: 529 agtggccacaccatcaatctcttgagatggtgcgacgaca 568 ||||||||||| || ||||| |||||||||||||||||| Sbjct: 34595 agtggccacacaattgatctcctgagatggtgcgacgaca 34556
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 531 bits (268), Expect = e-148 Identities = 457/520 (87%) Strand = Plus / Minus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 ||||| ||||||||||||||||||||| ||||||| ||||| ||||| ||| |||||||| Sbjct: 23870202 catggtcagaaggtcacatacttcctcaggccaatatgggagtctcctcccaagcccttc 23870143 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || | |||||||| |||||| |||||||||||||||||| ||| ||||||||||| ||| Sbjct: 23870142 aaaactatccctcattactaccatgagaatgtcaccatggcgaaactctgcaagttgcat 23870083 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 |||||||||||| ||||||||||||| ||||| ||||||||||| || ||||| |||||| Sbjct: 23870082 gggtggaaagtccgggagaccccacgacgtgtcttcgatgctgtactattcagcaatgag 23870023 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 || ||||| |||||| | |||||||||||||| ||||||||||| |||||||| || ||| Sbjct: 23870022 ctcgatattcttgaaatacgttggaatgaactaagcccctatgtctcagagtttgtgctg 23869963 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 |||||||| |||||||| |||||||| ||| |||||| || |||||||||||| || Sbjct: 23869962 cttgagtcgaactcaaccttcactggattgaaaaagcccctgcacttcaaggaaaatcgt 23869903 Query: 349 catcgatttagatttgctgaatcgcggctgacctatggcacatatgggggaagattcatg 408 ||||||||| ||||||||||||| |||||||| ||||| | ||||||||| ||| || Sbjct: 23869902 catcgatttggatttgctgaatcacggctgacatatggtatgattgggggaaggttcgtg 23869843 Query: 409 aagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttctt 468 ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 23869842 aagggagaaaacccatttgttgaggagtcatatcagagggttgccctggaccagcttatt 23869783 Query: 469 aggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatccca 528 | |||||||| ||| |||||||| ||| | |||||||||||||||||||||||||||||| Sbjct: 23869782 aagattgcaaaaatagaagatgatgacctgttgatcatgtcagatgttgatgaaatccca 23869723 Query: 529 agtggccacaccatcaatctcttgagatggtgcgacgaca 568 ||||||||||| || ||||| |||||||||||||||||| Sbjct: 23869722 agtggccacacaattgatctcctgagatggtgcgacgaca 23869683
>dbj|AK100897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131C16, full insert sequence Length = 1808 Score = 531 bits (268), Expect = e-148 Identities = 457/520 (87%) Strand = Plus / Plus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 ||||| ||||||||||||||||||||| ||||||| ||||| ||||| ||| |||||||| Sbjct: 412 catggtcagaaggtcacatacttcctcaggccaatatgggagtctcctcccaagcccttc 471 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || | |||||||| |||||| |||||||||||||||||| ||| ||||||||||| ||| Sbjct: 472 aaaactatccctcattactaccatgagaatgtcaccatggcgaaactctgcaagttgcat 531 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 |||||||||||| ||||||||||||| ||||| ||||||||||| || ||||| |||||| Sbjct: 532 gggtggaaagtccgggagaccccacgacgtgtcttcgatgctgtactattcagcaatgag 591 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 || ||||| |||||| | |||||||||||||| ||||||||||| |||||||| || ||| Sbjct: 592 ctcgatattcttgaaatacgttggaatgaactaagcccctatgtctcagagtttgtgctg 651 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 |||||||| |||||||| |||||||| ||| |||||| || |||||||||||| || Sbjct: 652 cttgagtcgaactcaaccttcactggattgaaaaagcccctgcacttcaaggaaaatcgt 711 Query: 349 catcgatttagatttgctgaatcgcggctgacctatggcacatatgggggaagattcatg 408 ||||||||| ||||||||||||| |||||||| ||||| | ||||||||| ||| || Sbjct: 712 catcgatttggatttgctgaatcacggctgacatatggtatgattgggggaaggttcgtg 771 Query: 409 aagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttctt 468 ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 772 aagggagaaaacccatttgttgaggagtcatatcagagggttgccctggaccagcttatt 831 Query: 469 aggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatccca 528 | |||||||| ||| |||||||| ||| | |||||||||||||||||||||||||||||| Sbjct: 832 aagattgcaaaaatagaagatgatgacctgttgatcatgtcagatgttgatgaaatccca 891 Query: 529 agtggccacaccatcaatctcttgagatggtgcgacgaca 568 ||||||||||| || ||||| |||||||||||||||||| Sbjct: 892 agtggccacacaattgatctcctgagatggtgcgacgaca 931
>dbj|AK067372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106K01, full insert sequence Length = 2486 Score = 531 bits (268), Expect = e-148 Identities = 457/520 (87%) Strand = Plus / Plus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 ||||| ||||||||||||||||||||| ||||||| ||||| ||||| ||| |||||||| Sbjct: 442 catggtcagaaggtcacatacttcctcaggccaatatgggagtctcctcccaagcccttc 501 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || | |||||||| |||||| |||||||||||||||||| ||| ||||||||||| ||| Sbjct: 502 aaaactatccctcattactaccatgagaatgtcaccatggcgaaactctgcaagttgcat 561 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 |||||||||||| ||||||||||||| ||||| ||||||||||| || ||||| |||||| Sbjct: 562 gggtggaaagtccgggagaccccacgacgtgtcttcgatgctgtactattcagcaatgag 621 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 || ||||| |||||| | |||||||||||||| ||||||||||| |||||||| || ||| Sbjct: 622 ctcgatattcttgaaatacgttggaatgaactaagcccctatgtctcagagtttgtgctg 681 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 |||||||| |||||||| |||||||| ||| |||||| || |||||||||||| || Sbjct: 682 cttgagtcgaactcaaccttcactggattgaaaaagcccctgcacttcaaggaaaatcgt 741 Query: 349 catcgatttagatttgctgaatcgcggctgacctatggcacatatgggggaagattcatg 408 ||||||||| ||||||||||||| |||||||| ||||| | ||||||||| ||| || Sbjct: 742 catcgatttggatttgctgaatcacggctgacatatggtatgattgggggaaggttcgtg 801 Query: 409 aagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttctt 468 ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 802 aagggagaaaacccatttgttgaggagtcatatcagagggttgccctggaccagcttatt 861 Query: 469 aggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatccca 528 | |||||||| ||| |||||||| ||| | |||||||||||||||||||||||||||||| Sbjct: 862 aagattgcaaaaatagaagatgatgacctgttgatcatgtcagatgttgatgaaatccca 921 Query: 529 agtggccacaccatcaatctcttgagatggtgcgacgaca 568 ||||||||||| || ||||| |||||||||||||||||| Sbjct: 922 agtggccacacaattgatctcctgagatggtgcgacgaca 961
>dbj|AK063950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F04, full insert sequence Length = 1962 Score = 531 bits (268), Expect = e-148 Identities = 457/520 (87%) Strand = Plus / Plus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 ||||| ||||||||||||||||||||| ||||||| ||||| ||||| ||| |||||||| Sbjct: 476 catggtcagaaggtcacatacttcctcaggccaatatgggagtctcctcccaagcccttc 535 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || | |||||||| |||||| |||||||||||||||||| ||| ||||||||||| ||| Sbjct: 536 aaaactatccctcattactaccatgagaatgtcaccatggcgaaactctgcaagttgcat 595 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 |||||||||||| ||||||||||||| ||||| ||||||||||| || ||||| |||||| Sbjct: 596 gggtggaaagtccgggagaccccacgacgtgtcttcgatgctgtactattcagcaatgag 655 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 || ||||| |||||| | |||||||||||||| ||||||||||| |||||||| || ||| Sbjct: 656 ctcgatattcttgaaatacgttggaatgaactaagcccctatgtctcagagtttgtgctg 715 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 |||||||| |||||||| |||||||| ||| |||||| || |||||||||||| || Sbjct: 716 cttgagtcgaactcaaccttcactggattgaaaaagcccctgcacttcaaggaaaatcgt 775 Query: 349 catcgatttagatttgctgaatcgcggctgacctatggcacatatgggggaagattcatg 408 ||||||||| ||||||||||||| |||||||| ||||| | ||||||||| ||| || Sbjct: 776 catcgatttggatttgctgaatcacggctgacatatggtatgattgggggaaggttcgtg 835 Query: 409 aagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttctt 468 ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 836 aagggagaaaacccatttgttgaggagtcatatcagagggttgccctggaccagcttatt 895 Query: 469 aggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatccca 528 | |||||||| ||| |||||||| ||| | |||||||||||||||||||||||||||||| Sbjct: 896 aagattgcaaaaatagaagatgatgacctgttgatcatgtcagatgttgatgaaatccca 955 Query: 529 agtggccacaccatcaatctcttgagatggtgcgacgaca 568 ||||||||||| || ||||| |||||||||||||||||| Sbjct: 956 agtggccacacaattgatctcctgagatggtgcgacgaca 995
>ref|XM_466518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1739 Score = 266 bits (134), Expect = 7e-68 Identities = 427/522 (81%), Gaps = 2/522 (0%) Strand = Plus / Plus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 |||||||||||||| || ||||| || || || ||||||||| ||||| |||||||| Sbjct: 480 catggccagaaggtgacttactttcttcgaccgatctgggaaaaaccgccaaagcccttc 539 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || | | ||||||||||| |||| |||||| | |||| ||||| |||||||| ||| Sbjct: 540 aatgtgcttcctcactactatcatgaaaatgtctcgatggcaaacctatgcaagttgcat 599 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 || |||||||||||||| || |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 600 ggatggaaagtcagggaaactccacgccgtgtttttgatgctgtgcttttcagcaatgag 659 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 ||||| || ||||| | |||||| |||| || ||||| ||||||||||| || || ||| Sbjct: 660 cttgacattcttgatatccgttggcatgagcttagcccatatgtgtcagaatttgtgctg 719 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 || |||||||||||||| ||||||||| ||| |||| ||| ||||||||||||||| Sbjct: 720 ctcgagtccaactcaaccttcactggcctgaaaaaggatctccacttcaaggaaaaccgt 779 Query: 349 catcgatttagatttgctgaatcgcggctgacctatggca-catatgggggaagattcat 407 || || ||| |||||||||||| ||| |||||||||| | ||| || |||||||| | Sbjct: 780 caacgctttgaatttgctgaatcacggttgacctatggtatgata-ggtggaagatttgt 838 Query: 408 gaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttct 467 |||||| || || |||||||| |||||||| ||||| |||||||| || ||||||||| | Sbjct: 839 gaagggggagaacccatttgtcgaggagtcatatcaaagggttgctcttgaccagcttat 898 Query: 468 taggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatccc 527 | ||||| |||| |||||| ||| | ||||||||||| ||||||||||| ||||| Sbjct: 899 caaaattgctggaatcacagatgatgaccttttgatcatgtctgatgttgatgagatccc 958 Query: 528 aagtggccacaccatcaatctcttgagatggtgcgacgacac 569 |||||||| || ||||| |||||||| ||||| || ||||| Sbjct: 959 cagtggccatacaatcaacctcttgaggtggtgtgatgacac 1000
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 266 bits (134), Expect = 7e-68 Identities = 427/522 (81%), Gaps = 2/522 (0%) Strand = Plus / Minus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 |||||||||||||| || ||||| || || || ||||||||| ||||| |||||||| Sbjct: 23090487 catggccagaaggtgacttactttcttcgaccgatctgggaaaaaccgccaaagcccttc 23090428 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || | | ||||||||||| |||| |||||| | |||| ||||| |||||||| ||| Sbjct: 23090427 aatgtgcttcctcactactatcatgaaaatgtctcgatggcaaacctatgcaagttgcat 23090368 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 || |||||||||||||| || |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 23090367 ggatggaaagtcagggaaactccacgccgtgtttttgatgctgtgcttttcagcaatgag 23090308 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 ||||| || ||||| | |||||| |||| || ||||| ||||||||||| || || ||| Sbjct: 23090307 cttgacattcttgatatccgttggcatgagcttagcccatatgtgtcagaatttgtgctg 23090248 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 || |||||||||||||| ||||||||| ||| |||| ||| ||||||||||||||| Sbjct: 23090247 ctcgagtccaactcaaccttcactggcctgaaaaaggatctccacttcaaggaaaaccgt 23090188 Query: 349 catcgatttagatttgctgaatcgcggctgacctatggca-catatgggggaagattcat 407 || || ||| |||||||||||| ||| |||||||||| | ||| || |||||||| | Sbjct: 23090187 caacgctttgaatttgctgaatcacggttgacctatggtatgata-ggtggaagatttgt 23090129 Query: 408 gaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttct 467 |||||| || || |||||||| |||||||| ||||| |||||||| || ||||||||| | Sbjct: 23090128 gaagggggagaacccatttgtcgaggagtcatatcaaagggttgctcttgaccagcttat 23090069 Query: 468 taggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatccc 527 | ||||| |||| |||||| ||| | ||||||||||| ||||||||||| ||||| Sbjct: 23090068 caaaattgctggaatcacagatgatgaccttttgatcatgtctgatgttgatgagatccc 23090009 Query: 528 aagtggccacaccatcaatctcttgagatggtgcgacgacac 569 |||||||| || ||||| |||||||| ||||| || ||||| Sbjct: 23090008 cagtggccatacaatcaacctcttgaggtggtgtgatgacac 23089967 Score = 210 bits (106), Expect = 4e-51 Identities = 280/338 (82%) Strand = Plus / Minus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 ||||||||||| ||||| ||||||||| | |||||||||||| || || |||||||| Sbjct: 23104020 catggccagaaagtcacttacttcctcagaccaatctgggaaaagcccccaaagcccttc 23103961 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || || | |||||||||||||| || |||||| | |||| ||| | |||||||||||| Sbjct: 23103960 aaagtacttcctcactactacaacgaaaatgtctcaatggccaacttatgcaagttacat 23103901 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 || |||||||||||||| || || || |||||||| ||||||||||| ||||| || ||| Sbjct: 23103900 ggatggaaagtcagggaaacgccgcggcgtgtttttgatgctgtgcttttcagcaacgag 23103841 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 |||||||| ||||| | |||||| |||| || ||||| |||||||||||||| || || Sbjct: 23103840 cttgatattcttgatatccgttggcatgagcttagcccttatgtgtcagagtttgtgttg 23103781 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 ||||||||||||||||| ||||||||| | | |||| ||| ||||||||||||||| Sbjct: 23103780 cttgagtccaactcaaccttcactggccttaaaaaggatctccacttcaaggaaaaccgt 23103721 Query: 349 catcgatttagatttgctgaatcgcggctgacctatgg 386 || || ||| |||||||||||| ||| |||||||||| Sbjct: 23103720 caacgttttgaatttgctgaatcacggttgacctatgg 23103683 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Minus Query: 407 tgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttc 466 ||||||| || || |||||||| |||||||| |||||||||||||| || ||||||||| Sbjct: 23103662 tgaagggggagaacccatttgtcgaggagtcatatcagagggttgctcttgaccagctta 23103603 Query: 467 ttaggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcc 526 ||| ||||| | || |||||| ||| | ||||||||||| ||||||||||| || | Sbjct: 23103602 ttaaaattgccgggatcacagatgatgacctgttgatcatgtctgatgttgatgagattc 23103543 Query: 527 caagtggccacaccatcaatctcttgagatggtg 560 ||||||| || || ||||| |||||||||||||| Sbjct: 23103542 caagtgggcatacgatcaacctcttgagatggtg 23103509
>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09 Length = 138615 Score = 266 bits (134), Expect = 7e-68 Identities = 427/522 (81%), Gaps = 2/522 (0%) Strand = Plus / Minus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 |||||||||||||| || ||||| || || || ||||||||| ||||| |||||||| Sbjct: 57525 catggccagaaggtgacttactttcttcgaccgatctgggaaaaaccgccaaagcccttc 57466 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || | | ||||||||||| |||| |||||| | |||| ||||| |||||||| ||| Sbjct: 57465 aatgtgcttcctcactactatcatgaaaatgtctcgatggcaaacctatgcaagttgcat 57406 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 || |||||||||||||| || |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 57405 ggatggaaagtcagggaaactccacgccgtgtttttgatgctgtgcttttcagcaatgag 57346 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 ||||| || ||||| | |||||| |||| || ||||| ||||||||||| || || ||| Sbjct: 57345 cttgacattcttgatatccgttggcatgagcttagcccatatgtgtcagaatttgtgctg 57286 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 || |||||||||||||| ||||||||| ||| |||| ||| ||||||||||||||| Sbjct: 57285 ctcgagtccaactcaaccttcactggcctgaaaaaggatctccacttcaaggaaaaccgt 57226 Query: 349 catcgatttagatttgctgaatcgcggctgacctatggca-catatgggggaagattcat 407 || || ||| |||||||||||| ||| |||||||||| | ||| || |||||||| | Sbjct: 57225 caacgctttgaatttgctgaatcacggttgacctatggtatgata-ggtggaagatttgt 57167 Query: 408 gaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttct 467 |||||| || || |||||||| |||||||| ||||| |||||||| || ||||||||| | Sbjct: 57166 gaagggggagaacccatttgtcgaggagtcatatcaaagggttgctcttgaccagcttat 57107 Query: 468 taggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatccc 527 | ||||| |||| |||||| ||| | ||||||||||| ||||||||||| ||||| Sbjct: 57106 caaaattgctggaatcacagatgatgaccttttgatcatgtctgatgttgatgagatccc 57047 Query: 528 aagtggccacaccatcaatctcttgagatggtgcgacgacac 569 |||||||| || ||||| |||||||| ||||| || ||||| Sbjct: 57046 cagtggccatacaatcaacctcttgaggtggtgtgatgacac 57005 Score = 210 bits (106), Expect = 4e-51 Identities = 280/338 (82%) Strand = Plus / Minus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 ||||||||||| ||||| ||||||||| | |||||||||||| || || |||||||| Sbjct: 71058 catggccagaaagtcacttacttcctcagaccaatctgggaaaagcccccaaagcccttc 70999 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || || | |||||||||||||| || |||||| | |||| ||| | |||||||||||| Sbjct: 70998 aaagtacttcctcactactacaacgaaaatgtctcaatggccaacttatgcaagttacat 70939 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 || |||||||||||||| || || || |||||||| ||||||||||| ||||| || ||| Sbjct: 70938 ggatggaaagtcagggaaacgccgcggcgtgtttttgatgctgtgcttttcagcaacgag 70879 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 |||||||| ||||| | |||||| |||| || ||||| |||||||||||||| || || Sbjct: 70878 cttgatattcttgatatccgttggcatgagcttagcccttatgtgtcagagtttgtgttg 70819 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 ||||||||||||||||| ||||||||| | | |||| ||| ||||||||||||||| Sbjct: 70818 cttgagtccaactcaaccttcactggccttaaaaaggatctccacttcaaggaaaaccgt 70759 Query: 349 catcgatttagatttgctgaatcgcggctgacctatgg 386 || || ||| |||||||||||| ||| |||||||||| Sbjct: 70758 caacgttttgaatttgctgaatcacggttgacctatgg 70721 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Minus Query: 407 tgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttc 466 ||||||| || || |||||||| |||||||| |||||||||||||| || ||||||||| Sbjct: 70700 tgaagggggagaacccatttgtcgaggagtcatatcagagggttgctcttgaccagctta 70641 Query: 467 ttaggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcc 526 ||| ||||| | || |||||| ||| | ||||||||||| ||||||||||| || | Sbjct: 70640 ttaaaattgccgggatcacagatgatgacctgttgatcatgtctgatgttgatgagattc 70581 Query: 527 caagtggccacaccatcaatctcttgagatggtg 560 ||||||| || || ||||| |||||||||||||| Sbjct: 70580 caagtgggcatacgatcaacctcttgagatggtg 70547
>dbj|AK060490.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H10, full insert sequence Length = 1738 Score = 250 bits (126), Expect = 4e-63 Identities = 426/522 (81%), Gaps = 3/522 (0%) Strand = Plus / Plus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 |||||||||||||| || ||||| || || || ||||||||| ||||| |||||||| Sbjct: 480 catggccagaaggtgacttactttcttcgaccgatctgggaaaaaccgccaaagcccttc 539 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || | | ||||||||||| |||| |||||| | |||| ||||| |||||||| ||| Sbjct: 540 aatgtgcttcctcactactatcatgaaaatgtctcgatggcaaacctatgcaagttgcat 599 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 || |||||||||||||| || |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 600 ggatggaaagtcagggaaactccacgccgtgtttttgatgctgtgcttttcagcaatgag 659 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 ||||| || ||||| | |||||| |||| || ||||| ||||||||||| || || ||| Sbjct: 660 cttgacattcttgatatccgttggcatgagcttagcccatatgtgtcagaatttgtgctg 719 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 || |||||||||||||| ||||||||| ||| |||| ||| ||||||||||||||| Sbjct: 720 ctcgagtccaactcaaccttcactggcctgaaaaaggatctccacttcaaggaaaaccgt 779 Query: 349 catcgatttagatttgctgaatcgcggctgacctatggca-catatgggggaagattcat 407 || || ||| |||||||||||| ||| |||||||||| | ||| || |||||||| | Sbjct: 780 caacgctttgaatttgctgaatcacggttgacctatggtatgata-ggtggaagatttgt 838 Query: 408 gaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttct 467 |||||| | || |||||||| |||||||| ||||| |||||||| || ||||||||| | Sbjct: 839 gaaggg-gggaacccatttgtcgaggagtcatatcaaagggttgctcttgaccagcttat 897 Query: 468 taggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatccc 527 | ||||| |||| |||||| ||| | ||||||||||| ||||||||||| ||||| Sbjct: 898 caaaattgctggaatcacagatgatgaccttttgatcatgtctgatgttgatgagatccc 957 Query: 528 aagtggccacaccatcaatctcttgagatggtgcgacgacac 569 |||||||| || ||||| |||||||| ||||| || ||||| Sbjct: 958 cagtggccatacaatcaacctcttgaggtggtgtgatgacac 999
>ref|XM_466520.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2228 Score = 210 bits (106), Expect = 4e-51 Identities = 280/338 (82%) Strand = Plus / Plus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 ||||||||||| ||||| ||||||||| | |||||||||||| || || |||||||| Sbjct: 852 catggccagaaagtcacttacttcctcagaccaatctgggaaaagcccccaaagcccttc 911 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || || | |||||||||||||| || |||||| | |||| ||| | |||||||||||| Sbjct: 912 aaagtacttcctcactactacaacgaaaatgtctcaatggccaacttatgcaagttacat 971 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 || |||||||||||||| || || || |||||||| ||||||||||| ||||| || ||| Sbjct: 972 ggatggaaagtcagggaaacgccgcggcgtgtttttgatgctgtgcttttcagcaacgag 1031 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 |||||||| ||||| | |||||| |||| || ||||| |||||||||||||| || || Sbjct: 1032 cttgatattcttgatatccgttggcatgagcttagcccttatgtgtcagagtttgtgttg 1091 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 ||||||||||||||||| ||||||||| | | |||| ||| ||||||||||||||| Sbjct: 1092 cttgagtccaactcaaccttcactggccttaaaaaggatctccacttcaaggaaaaccgt 1151 Query: 349 catcgatttagatttgctgaatcgcggctgacctatgg 386 || || ||| |||||||||||| ||| |||||||||| Sbjct: 1152 caacgttttgaatttgctgaatcacggttgacctatgg 1189 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 407 tgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttc 466 ||||||| || || |||||||| |||||||| |||||||||||||| || ||||||||| Sbjct: 1210 tgaagggggagaacccatttgtcgaggagtcatatcagagggttgctcttgaccagctta 1269 Query: 467 ttaggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcc 526 ||| ||||| | || |||||| ||| | ||||||||||| ||||||||||| || | Sbjct: 1270 ttaaaattgccgggatcacagatgatgacctgttgatcatgtctgatgttgatgagattc 1329 Query: 527 caagtggccacaccatcaatctcttgagatggtg 560 ||||||| || || ||||| |||||||||||||| Sbjct: 1330 caagtgggcatacgatcaacctcttgagatggtg 1363
>dbj|AK070690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058I02, full insert sequence Length = 2261 Score = 210 bits (106), Expect = 4e-51 Identities = 280/338 (82%) Strand = Plus / Plus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 ||||||||||| ||||| ||||||||| | |||||||||||| || || |||||||| Sbjct: 884 catggccagaaagtcacttacttcctcagaccaatctgggaaaagcccccaaagcccttc 943 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || || | |||||||||||||| || |||||| | |||| ||| | |||||||||||| Sbjct: 944 aaagtacttcctcactactacaacgaaaatgtctcaatggccaacttatgcaagttacat 1003 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 || |||||||||||||| || || || |||||||| ||||||||||| ||||| || ||| Sbjct: 1004 ggatggaaagtcagggaaacgccgcggcgtgtttttgatgctgtgcttttcagcaacgag 1063 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 |||||||| ||||| | |||||| |||| || ||||| |||||||||||||| || || Sbjct: 1064 cttgatattcttgatatccgttggcatgagcttagcccttatgtgtcagagtttgtgttg 1123 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 ||||||||||||||||| ||||||||| | | |||| ||| ||||||||||||||| Sbjct: 1124 cttgagtccaactcaaccttcactggccttaaaaaggatctccacttcaaggaaaaccgt 1183 Query: 349 catcgatttagatttgctgaatcgcggctgacctatgg 386 || || ||| |||||||||||| ||| |||||||||| Sbjct: 1184 caacgttttgaatttgctgaatcacggttgacctatgg 1221 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 407 tgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttc 466 ||||||| || || |||||||| |||||||| |||||||||||||| || ||||||||| Sbjct: 1242 tgaagggggagaacccatttgtcgaggagtcatatcagagggttgctcttgaccagctta 1301 Query: 467 ttaggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcc 526 ||| ||||| | || |||||| ||| | ||||||||||| ||||||||||| || | Sbjct: 1302 ttaaaattgccgggatcacagatgatgacctgttgatcatgtctgatgttgatgagattc 1361 Query: 527 caagtggccacaccatcaatctcttgagatggtg 560 ||||||| || || ||||| |||||||||||||| Sbjct: 1362 caagtgggcatacgatcaacctcttgagatggtg 1395
>dbj|AK065136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A04, full insert sequence Length = 3334 Score = 210 bits (106), Expect = 4e-51 Identities = 280/338 (82%) Strand = Plus / Plus Query: 49 catggccagaaggtcacatacttcctccggccaatctgggaatctccgcccgagcccttc 108 ||||||||||| ||||| ||||||||| | |||||||||||| || || |||||||| Sbjct: 1813 catggccagaaagtcacttacttcctcagaccaatctgggaaaagcccccaaagcccttc 1872 Query: 109 aagataatccctcactactacaatgagaatgtcaccatggagaacctctgcaagttacat 168 || || | |||||||||||||| || |||||| | |||| ||| | |||||||||||| Sbjct: 1873 aaagtacttcctcactactacaacgaaaatgtctcaatggccaacttatgcaagttacat 1932 Query: 169 gggtggaaagtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgag 228 || |||||||||||||| || || || |||||||| ||||||||||| ||||| || ||| Sbjct: 1933 ggatggaaagtcagggaaacgccgcggcgtgtttttgatgctgtgcttttcagcaacgag 1992 Query: 229 cttgatatccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctg 288 |||||||| ||||| | |||||| |||| || ||||| |||||||||||||| || || Sbjct: 1993 cttgatattcttgatatccgttggcatgagcttagcccttatgtgtcagagtttgtgttg 2052 Query: 289 cttgagtccaactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgc 348 ||||||||||||||||| ||||||||| | | |||| ||| ||||||||||||||| Sbjct: 2053 cttgagtccaactcaaccttcactggccttaaaaaggatctccacttcaaggaaaaccgt 2112 Query: 349 catcgatttagatttgctgaatcgcggctgacctatgg 386 || || ||| |||||||||||| ||| |||||||||| Sbjct: 2113 caacgttttgaatttgctgaatcacggttgacctatgg 2150 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 407 tgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttc 466 ||||||| || || |||||||| |||||||| |||||||||||||| || ||||||||| Sbjct: 2171 tgaagggggagaacccatttgtcgaggagtcatatcagagggttgctcttgaccagctta 2230 Query: 467 ttaggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcc 526 ||| ||||| | || |||||| ||| | ||||||||||| ||||||||||| || | Sbjct: 2231 ttaaaattgccgggatcacagatgatgacctgttgatcatgtctgatgttgatgagattc 2290 Query: 527 caagtggccacaccatcaatctcttgagatggtg 560 ||||||| || || ||||| |||||||||||||| Sbjct: 2291 caagtgggcatacgatcaacctcttgagatggtg 2324
>emb|AJ629867.2| Cucumis sativus mRNA for putative N-acetylglucosaminyltransferase III (gnT-III gene) Length = 2192 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 499 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 558 ||||| ||||| |||||||| ||||| ||||| | ||||| || ||||||||||||||| Sbjct: 1249 ttgataatgtctgatgttgacgaaattccaagcaggcacacaattaatctcttgagatgg 1308 Query: 559 tg 560 || Sbjct: 1309 tg 1310 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 190 ccacgccgtgttttcgatgctgtgctcttcagtaatgagcttga 233 ||||| ||||||| ||||||||||| |||||||||||| |||| Sbjct: 940 ccacgacgtgtttatgatgctgtgctgttcagtaatgagattga 983
>emb|AJ891043.1| Populus tremula x Populus alba mRNA for beta 1,4 N-acetylglucosaminyltransferase (poGNT3 gene), clone INRA 717 1B4 Length = 1167 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 505 atgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcgac 564 ||||||||||||||||| || || || | ||||| |||||||||||||| ||||| || Sbjct: 643 atgtcagatgttgatgagataccgagcagacacactatcaatctcttgaggtggtgtgat 702 Query: 565 gacac 569 ||||| Sbjct: 703 gacac 707 Score = 40.1 bits (20), Expect = 7.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 114 aatccctcactactacaatgagaatgtcaccatggagaacctctgcaa 161 |||||| ||||| || |||||||||| | ||||||||||||||||| Sbjct: 252 aatcccacactattatcatgagaatgtgtcgatggagaacctctgcaa 299
>ref|NM_101170.2| Arabidopsis thaliana acetylglucosaminyltransferase/ transferase, transferring glycosyl groups AT1G12990 mRNA, complete cds Length = 2030 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 505 atgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcga 563 ||||| ||||| ||||| || |||||| | |||||||| || || |||||||||||||| Sbjct: 988 atgtctgatgtcgatgagattccaagtagacacaccattaaccttttgagatggtgcga 1046
>ref|NM_111028.2| Arabidopsis thaliana acetylglucosaminyltransferase/ transferase, transferring glycosyl groups AT3G01620 mRNA, complete cds Length = 1493 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 499 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 558 ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||| | |||||| Sbjct: 833 ttgataatgtcggatgtcgatgagatcccgagcggccataccatcaatctgcttagatgg 892 Query: 559 tgcgacg 565 || |||| Sbjct: 893 tgtgacg 899
>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence, complete sequence Length = 105543 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Minus Query: 499 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 558 ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||| | |||||| Sbjct: 57848 ttgataatgtcggatgtcgatgagatcccgagcggccataccatcaatctgcttagatgg 57789 Query: 559 tgcgacg 565 || |||| Sbjct: 57788 tgtgacg 57782
>emb|BX818732.1|CNS0AAN4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL95ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1776 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 505 atgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcga 563 ||||| ||||| ||||| || |||||| | |||||||| || || |||||||||||||| Sbjct: 985 atgtctgatgtcgatgagattccaagtagacacaccattaaccttttgagatggtgcga 1043
>gb|BT004421.1| Arabidopsis thaliana clone U20435 unknown protein (At3g01620) mRNA, complete cds Length = 1198 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 499 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 558 ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||| | |||||| Sbjct: 637 ttgataatgtcggatgtcgatgagatcccgagcggccataccatcaatctgcttagatgg 696 Query: 559 tgcgacg 565 || |||| Sbjct: 697 tgtgacg 703
>gb|BT002978.1| Arabidopsis thaliana clone RAFL15-02-G18 (R20435) unknown protein (At3g01620) mRNA, complete cds Length = 1512 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 499 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 558 ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||| | |||||| Sbjct: 833 ttgataatgtcggatgtcgatgagatcccgagcggccataccatcaatctgcttagatgg 892 Query: 559 tgcgacg 565 || |||| Sbjct: 893 tgtgacg 899
>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence Length = 99758 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 505 atgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcga 563 ||||| ||||| ||||| || |||||| | |||||||| || || |||||||||||||| Sbjct: 7718 atgtctgatgtcgatgagattccaagtagacacaccattaaccttttgagatggtgcga 7776
>ref|NM_113670.3| Arabidopsis thaliana acetylglucosaminyltransferase/ transferase, transferring glycosyl groups AT3G27540 mRNA, complete cds Length = 1772 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 499 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 558 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 812 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 871 Query: 559 tg 560 || Sbjct: 872 tg 873
>gb|AC098711.2| Mus musculus BAC clone RP23-1M11 from 13, complete sequence Length = 204508 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 495 catattgatcatgtcagatgtt 516 |||||||||||||||||||||| Sbjct: 156646 catattgatcatgtcagatgtt 156667
>gb|BT000311.1| Arabidopsis thaliana unknown protein (At3g27540) mRNA, complete cds Length = 1432 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 499 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 558 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 631 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 690 Query: 559 tg 560 || Sbjct: 691 tg 692
>gb|AE012048.1| Xanthomonas axonopodis pv. citri str. 306, section 426 of 469 of the complete genome Length = 12239 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 193 cgccgtgttttcgatgctgtgc 214 |||||||||||||||||||||| Sbjct: 977 cgccgtgttttcgatgctgtgc 998
>gb|AY099829.1| Arabidopsis thaliana unknown protein (At3g27540) mRNA, complete cds Length = 1717 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 499 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 558 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 757 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 816 Query: 559 tg 560 || Sbjct: 817 tg 818
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 187 accccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 236 ||||| |||||||| || || || || |||||||||||||| |||||||| Sbjct: 25918259 acccctcgccgtgtctttgacgccgtcctcttcagtaatgaacttgatat 25918308
>emb|BX824115.1|CNS0A5JW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZD10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1682 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 499 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 558 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 811 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 870 Query: 559 tg 560 || Sbjct: 871 tg 872
>emb|AL928668.7| Zebrafish DNA sequence from clone CH211-208M1, complete sequence Length = 241975 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 203 tcgatgctgtgctcttcagtaa 224 |||||||||||||||||||||| Sbjct: 65395 tcgatgctgtgctcttcagtaa 65374
>dbj|AB025626.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MMJ24 Length = 54452 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 499 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 558 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 35659 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 35718 Query: 559 tg 560 || Sbjct: 35719 tg 35720
>dbj|AK101128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025O17, full insert sequence Length = 2006 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 187 accccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 236 ||||| |||||||| || || || || |||||||||||||| |||||||| Sbjct: 792 acccctcgccgtgtctttgacgccgtcctcttcagtaatgaacttgatat 841
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 187 accccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 236 ||||| |||||||| || || || || |||||||||||||| |||||||| Sbjct: 25846435 acccctcgccgtgtctttgacgccgtcctcttcagtaatgaacttgatat 25846484
>emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial sequence from BAC OJ1257_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 61296 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Minus Query: 187 accccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 236 ||||| |||||||| || || || || |||||||||||||| |||||||| Sbjct: 57030 acccctcgccgtgtctttgacgccgtcctcttcagtaatgaacttgatat 56981
>emb|AL714027.8| Mouse DNA sequence from clone RP23-96E23 on chromosome X, complete sequence Length = 175809 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 31 atgttaataatatataagcatg 52 |||||||||||||||||||||| Sbjct: 53448 atgttaataatatataagcatg 53427
>gb|AC093555.2| Homo sapiens chromosome 3 clone RP11-30A19, complete sequence Length = 163790 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 gtcagatgttgatgaaatccc 527 ||||||||||||||||||||| Sbjct: 88260 gtcagatgttgatgaaatccc 88280
>emb|BX119954.10| Zebrafish DNA sequence from clone CH211-286O14, complete sequence Length = 155287 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 gtaatgttaataatatataag 48 ||||||||||||||||||||| Sbjct: 116368 gtaatgttaataatatataag 116388
>gb|AC160982.5| Mus musculus BAC clone RP23-351J19 from chromosome 12, complete sequence Length = 231693 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 tttcactggcgtgataaagccact 329 ||||||||| |||||||||||||| Sbjct: 18384 tttcactggagtgataaagccact 18361
>gb|AF217490.1|AF217491S3 Homo sapiens fragile 16D oxido reductase (FOR) gene, exons 8, 9, and partial cds Length = 270752 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ccaactcaactttcactggc 315 |||||||||||||||||||| Sbjct: 157843 ccaactcaactttcactggc 157862
>gb|AY687989.1| Cortaderia jubata tRNA-Ser (trnS), ribosomal protein S4, and tRNA-Thr (trnT) genes, complete sequence; chloroplast Length = 1241 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 cagatgttgatgaaatccca 528 |||||||||||||||||||| Sbjct: 1059 cagatgttgatgaaatccca 1040
>gb|AY687988.1| Cortaderia selloana tRNA-Ser (trnS), ribosomal protein S4, tRNA-Thr (trnT) genes, complete sequence; chloroplast Length = 1241 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 cagatgttgatgaaatccca 528 |||||||||||||||||||| Sbjct: 1059 cagatgttgatgaaatccca 1040
>gb|AY518308.1| Mus musculus strain C57BL/6J guanine nucleotide-binding protein alpha subunit (Gnas) gene, exons 8, 9 and partial cds Length = 398 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 aagtcagggagaccccacgc 195 |||||||||||||||||||| Sbjct: 371 aagtcagggagaccccacgc 352
>gb|AY518307.1| Mus musculus strain BALB/c guanine nucleotide-binding protein alpha subunit (Gnas) gene, exons 8, 9 and partial cds Length = 398 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 aagtcagggagaccccacgc 195 |||||||||||||||||||| Sbjct: 371 aagtcagggagaccccacgc 352
>gb|AY518306.1| Mus musculus strain 129Sv guanine nucleotide-binding protein alpha subunit (Gnas) gene, exons 8, 9 and partial cds Length = 398 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 aagtcagggagaccccacgc 195 |||||||||||||||||||| Sbjct: 371 aagtcagggagaccccacgc 352
>gb|AY518305.1| Mus musculus strain FVB/N guanine nucleotide-binding protein alpha subunit (Gnas) gene, exons 8, 9 and partial cds Length = 398 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 aagtcagggagaccccacgc 195 |||||||||||||||||||| Sbjct: 371 aagtcagggagaccccacgc 352
>emb|CR407585.14| Zebrafish DNA sequence from clone CH211-141O18 in linkage group 6, complete sequence Length = 164483 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gatgctgtgctcttcagtaa 224 |||||||||||||||||||| Sbjct: 66332 gatgctgtgctcttcagtaa 66313
>gb|AF450245.1| Mus musculus clone BAC199M11, complete sequence Length = 124254 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 tttcactggcgtgataaagccact 329 ||||||||| |||||||||||||| Sbjct: 96471 tttcactggagtgataaagccact 96494
>emb|AL596210.20| Human DNA sequence from clone RP11-92O17 on chromosome 1 Contains part of the CAMTA1 gene for calmodulin binding transcription activator 1, complete sequence Length = 107112 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 atgggtggaaagtcagggag 186 |||||||||||||||||||| Sbjct: 42336 atgggtggaaagtcagggag 42355
>emb|CR407558.22| Zebrafish DNA sequence from clone CH211-107M8 in linkage group 8, complete sequence Length = 175706 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gatgctgtgctcttcagtaa 224 |||||||||||||||||||| Sbjct: 147935 gatgctgtgctcttcagtaa 147954
>ref|XM_775479.1| PREDICTED: Strongylocentrotus purpuratus similar to fetal Alzheimer antigen isoform 2 (LOC575060), mRNA Length = 10259 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 502 atcatgtcagatgttgatgaaatc 525 ||||||||||||| |||||||||| Sbjct: 9072 atcatgtcagatggtgatgaaatc 9095
>emb|AL593857.10| Mouse DNA sequence from clone RP23-439H2 on chromosome 2, complete sequence Length = 206452 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 aagtcagggagaccccacgc 195 |||||||||||||||||||| Sbjct: 201743 aagtcagggagaccccacgc 201724
>dbj|AK156996.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830112A14 product:tumor necrosis factor receptor superfamily, member 1b, full insert sequence Length = 3364 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 catggccagaaggtcacatacttc 72 |||||||||||||||||| ||||| Sbjct: 2693 catggccagaaggtcacacacttc 2716
>dbj|AK170464.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630104H19 product:tumor necrosis factor receptor superfamily, member 1b, full insert sequence Length = 2846 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 catggccagaaggtcacatacttc 72 |||||||||||||||||| ||||| Sbjct: 2650 catggccagaaggtcacacacttc 2673
>dbj|AK085490.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630034K06 product:tumor necrosis factor receptor superfamily, member 1b, full insert sequence Length = 3371 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 catggccagaaggtcacatacttc 72 |||||||||||||||||| ||||| Sbjct: 2698 catggccagaaggtcacacacttc 2721
>gb|AC046158.6| Homo sapiens chromosome 16 clone RP11-264L1, complete sequence Length = 150361 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ccaactcaactttcactggc 315 |||||||||||||||||||| Sbjct: 131713 ccaactcaactttcactggc 131732
>emb|AL929537.17| Mouse DNA sequence from clone RP23-147E9 on chromosome 2, complete sequence Length = 93822 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 aagtcagggagaccccacgc 195 |||||||||||||||||||| Sbjct: 11965 aagtcagggagaccccacgc 11984
>gb|AC161112.5| Mus musculus BAC clone RP24-468O24 from chromosome 12, complete sequence Length = 217434 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 tttcactggcgtgataaagccact 329 ||||||||| |||||||||||||| Sbjct: 126804 tttcactggagtgataaagccact 126781
>emb|AL627099.13| Mouse DNA sequence from clone RP23-306F22 on chromosome 4, complete sequence Length = 169469 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 catggccagaaggtcacatacttc 72 |||||||||||||||||| ||||| Sbjct: 21939 catggccagaaggtcacacacttc 21916 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,899,850 Number of Sequences: 3902068 Number of extensions: 4899850 Number of successful extensions: 92406 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92203 Number of HSP's gapped (non-prelim): 179 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)