>CRBN_HUMAN (Q96SW2) Protein cereblon|
          Length = 442

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = +3

Query: 318 HTYLG-EVDDIPGRKATLLDAGSIISLPMLFLHGVVLFPGATLPLKLIEARFVGAVEKAL 494
           HTYLG ++++  GR  TL D  S   +P+L    ++L PG TLPL+L   + V  V    
Sbjct: 57  HTYLGADMEEFHGR--TLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMV---- 110

Query: 495 RHVDAPETIGVVLMHGRPNHRNYANASVGTTAE 593
           R++   +    VL +     R    A  GTTAE
Sbjct: 111 RNLIQKDRTFAVLAYSNVQER---EAQFGTTAE 140

>CRBN_PONPY (Q5R6Y2) Protein cereblon|
          Length = 429

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = +3

Query: 318 HTYLG-EVDDIPGRKATLLDAGSIISLPMLFLHGVVLFPGATLPLKLIEARFVGAVEKAL 494
           HTYLG ++++  GR  TL D  S   +P+L    ++L PG TLPL+L   + V  V    
Sbjct: 44  HTYLGADMEEFHGR--TLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMV---- 97

Query: 495 RHVDAPETIGVVLMHGRPNHRNYANASVGTTAE 593
           R++   +    VL +     R    A  GTTAE
Sbjct: 98  RNLIQKDRTFAVLAYSNIQER---EAQFGTTAE 127

>CRBN_RAT (Q56AP7) Protein cereblon|
          Length = 445

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = +3

Query: 318 HTYLG-EVDDIPGRKATLLDAGSIISLPMLFLHGVVLFPGATLPLKLIEARFVGAVEKAL 494
           HTYLG ++++  GR  TL D  S   +P+L    ++L PG TLPL+L   + V  V    
Sbjct: 60  HTYLGADMEEFHGR--TLHDDDSCQVIPVLPEVMMILIPGQTLPLQLSHPQEVSMV---- 113

Query: 495 RHVDAPETIGVVLMHGRPNHRNYANASVGTTAE 593
           R++   +    VL +     R    A  GTTAE
Sbjct: 114 RNLIQKDRTFAVLAYSNVQER---EAQFGTTAE 143

>CRBN_MOUSE (Q8C7D2) Protein cereblon (Protein PiL)|
          Length = 445

 Score = 37.4 bits (85), Expect = 0.033
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = +3

Query: 318 HTYLG-EVDDIPGRKATLLDAGSIISLPMLFLHGVVLFPGATLPLKLIEARFVGAVEKAL 494
           HTYLG ++++  GR  TL D  S   +P+L    ++L PG TLPL+L   + V  V    
Sbjct: 60  HTYLGADMEEFHGR--TLHDDDSCQVIPVLPEVLMILIPGQTLPLQLSHPQEVSMV---- 113

Query: 495 RHVDAPETIGVVLMHGRPNHRNYANASVGTTAE 593
           R++   +    VL +     R    A  GTTAE
Sbjct: 114 RNLIQKDRTFAVLAYSNVQER---EAQFGTTAE 143

>CRBN_XENTR (Q640S2) Protein cereblon|
          Length = 447

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
 Frame = +3

Query: 318 HTYLG-EVDDIPGRKATLLDAGSIISLPMLFLHGVVLFPGATLPLKLIEARFVGAVEKAL 494
           H YLG ++++  GR  TL D  S   +P+L    V+L PG TLPL L   + V  V   +
Sbjct: 58  HAYLGVDMEEFHGR--TLHDDDSCQQIPVLPHVQVMLIPGQTLPLHLSRPQEVSMVRGLI 115

Query: 495 RHVDAPETIGVVLMHGRPNHRNYANASVGTTAE 593
           +     +    VL +     R    A  GTTAE
Sbjct: 116 QR----DRTFAVLAYSDGLQR---EAHFGTTAE 141

>RECF_DEIRA (Q9RVE0) DNA replication and repair protein recF|
          Length = 359

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = +3

Query: 288 RGEFGHQTAL--HTYLGEVDDIPGRKATLLDAGSIISLPMLFLHGVVLFPGATLPLKLIE 461
           R +FG    L    +  E+D  P R+  LLD  +  S+P   + G  L PGA L L+   
Sbjct: 287 REKFGEDPVLLLDDFTAELD--PHRRQYLLDLAA--SVPQAIVTGTELAPGAALTLRAQA 342

Query: 462 ARFVGAVEKALR 497
            RF    ++ ++
Sbjct: 343 GRFTPVADEEMQ 354

>LON2_MYXXA (P36774) ATP-dependent protease La 2 (EC 3.4.21.53)|
          Length = 826

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +3

Query: 393 LPMLFLHGVVLFPGATLPLKLIEARFVGAVEKALRHVDAPETIGVV 530
           LP+L L   V FPG  LPL +   + +  ++ A+R     + IGVV
Sbjct: 32  LPILPLRNSVFFPGGVLPLAVGRQKTIALIKDAVRD---DQVIGVV 74

>PTH_BACTN (Q89YZ2) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 189

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -2

Query: 152 PLEVLHVDLQDHPVPV-RLHLAGHGDDAGHNRRRDLASLL 36
           PLE + + + D  +P   L L G G DAGHN  + +A++L
Sbjct: 84  PLENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAIL 123

>LON1_MYXXA (P36773) ATP-dependent protease La 1 (EC 3.4.21.53)|
          Length = 817

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 13/50 (26%), Positives = 30/50 (60%)
 Frame = +3

Query: 387 ISLPMLFLHGVVLFPGATLPLKLIEARFVGAVEKALRHVDAPETIGVVLM 536
           +++P+L L  +++FP   +PL +   + + A++ A+ H   P+   V+L+
Sbjct: 16  LTVPLLPLRDIIVFPHMVVPLFVGREKSIAALKDAMAH-KGPDDKAVILL 64

>OOXA1_RHIME (Q92XP4) Opine oxidase subunit A (EC 1.-.-.-) (Octopine oxidase|
           subunit A)
          Length = 458

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +3

Query: 345 IPGRKATLLDAGSIISLPMLFLHGVVLFPGATLPLKLIEARFVGAVEKALRHVDAPET 518
           +PG    L+  G     P+ +L            L LI+    GA+  ALRHV A  T
Sbjct: 146 LPGGPLVLIGTG-----PLFYLFAAQCLAAGMRDLSLIDTAAAGAIVSALRHVPAALT 198


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,996,016
Number of Sequences: 219361
Number of extensions: 1347540
Number of successful extensions: 4284
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4284
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)