ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62j09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 Score = 519 bits (262), Expect = e-144 Identities = 403/450 (89%) Strand = Plus / Plus Query: 132 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 191 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 54 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 113 Query: 192 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 251 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 114 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 173 Query: 252 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 311 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 174 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 233 Query: 312 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 371 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 234 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 293 Query: 372 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgg 431 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 294 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcgg 353 Query: 432 gtatgcatgggagctcctcacccaggtctacaaattgcccactgatagaatttatgcaac 491 | ||| |||||||||||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 354 atttgcctgggagctcctcacccaggtgtacaaattgcctaccgatagaatttatgcgac 413 Query: 492 atactttggtggtgatgagaaagctggtctcgctcccgacactgagtcgaaaaacatatg 551 ||||||||||||||||||||| ||| || ||||| || || |||||||| |||||||| Sbjct: 414 ttactttggtggtgatgagaaatttggacttgctcctgatacggagtcgaagaacatatg 473 Query: 552 gttgaagtatctaccaaatgaaagagttct 581 |||||| || ||||| || |||| |||||| Sbjct: 474 gttgaaatacctacccaaagaaaaagttct 503
>dbj|AK066368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M16, full insert sequence Length = 3214 Score = 519 bits (262), Expect = e-144 Identities = 403/450 (89%) Strand = Plus / Plus Query: 132 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 191 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 200 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 259 Query: 192 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 251 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 260 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 319 Query: 252 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 311 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 320 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 379 Query: 312 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 371 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 380 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 439 Query: 372 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgg 431 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 440 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcgg 499 Query: 432 gtatgcatgggagctcctcacccaggtctacaaattgcccactgatagaatttatgcaac 491 | ||| |||||||||||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 500 atttgcctgggagctcctcacccaggtgtacaaattgcctaccgatagaatttatgcgac 559 Query: 492 atactttggtggtgatgagaaagctggtctcgctcccgacactgagtcgaaaaacatatg 551 ||||||||||||||||||||| ||| || ||||| || || |||||||| |||||||| Sbjct: 560 ttactttggtggtgatgagaaatttggacttgctcctgatacggagtcgaagaacatatg 619 Query: 552 gttgaagtatctaccaaatgaaagagttct 581 |||||| || ||||| || |||| |||||| Sbjct: 620 gttgaaatacctacccaaagaaaaagttct 649
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 418 bits (211), Expect = e-114 Identities = 298/327 (91%) Strand = Plus / Plus Query: 132 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 191 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 155130 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 155189 Query: 192 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 251 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 155190 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 155249 Query: 252 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 311 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 155250 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 155309 Query: 312 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 371 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 155310 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 155369 Query: 372 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgg 431 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 155370 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcgg 155429 Query: 432 gtatgcatgggagctcctcacccaggt 458 | ||| |||||||||||||||||||| Sbjct: 155430 atttgcctgggagctcctcacccaggt 155456
>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16, complete sequence Length = 127068 Score = 418 bits (211), Expect = e-114 Identities = 298/327 (91%) Strand = Plus / Plus Query: 132 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 191 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 46557 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 46616 Query: 192 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 251 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 46617 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 46676 Query: 252 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 311 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 46677 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 46736 Query: 312 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 371 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 46737 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 46796 Query: 372 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgg 431 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 46797 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcgg 46856 Query: 432 gtatgcatgggagctcctcacccaggt 458 | ||| |||||||||||||||||||| Sbjct: 46857 atttgcctgggagctcctcacccaggt 46883 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 454 caggtctacaaattgcccactgatagaatttatgcaacatactttggtggtgatgagaaa 513 ||||| ||||||||||| || |||||||||||||| || ||||||||||||||||||||| Sbjct: 47813 caggtgtacaaattgcctaccgatagaatttatgcgacttactttggtggtgatgagaaa 47872 Query: 514 gctggtctcgctcccgacactgagtcgaaaaacatatggttgaagtatctaccaaatgaa 573 ||| || ||||| || || |||||||| |||||||||||||| || ||||| || ||| Sbjct: 47873 tttggacttgctcctgatacggagtcgaagaacatatggttgaaatacctacccaaagaa 47932 Query: 574 agagttct 581 | |||||| Sbjct: 47933 aaagttct 47940
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 418 bits (211), Expect = e-114 Identities = 298/327 (91%) Strand = Plus / Plus Query: 132 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 191 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 5283359 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 5283418 Query: 192 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 251 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 5283419 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 5283478 Query: 252 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 311 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 5283479 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 5283538 Query: 312 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 371 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 5283539 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 5283598 Query: 372 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgg 431 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 5283599 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcgg 5283658 Query: 432 gtatgcatgggagctcctcacccaggt 458 | ||| |||||||||||||||||||| Sbjct: 5283659 atttgcctgggagctcctcacccaggt 5283685 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 454 caggtctacaaattgcccactgatagaatttatgcaacatactttggtggtgatgagaaa 513 ||||| ||||||||||| || |||||||||||||| || ||||||||||||||||||||| Sbjct: 5284615 caggtgtacaaattgcctaccgatagaatttatgcgacttactttggtggtgatgagaaa 5284674 Query: 514 gctggtctcgctcccgacactgagtcgaaaaacatatggttgaagtatctaccaaatgaa 573 ||| || ||||| || || |||||||| |||||||||||||| || ||||| || ||| Sbjct: 5284675 tttggacttgctcctgatacggagtcgaagaacatatggttgaaatacctacccaaagaa 5284734 Query: 574 agagttct 581 | |||||| Sbjct: 5284735 aaagttct 5284742 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 22302966 caccgccaccgccaccgccaccgc 22302943 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 14936948 caccgccaccgccaccgccaccgc 14936925 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 11471045 caccgccaccgccaccgccaccgc 11471068
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 418 bits (211), Expect = e-114 Identities = 298/327 (91%) Strand = Plus / Plus Query: 132 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 191 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 5284146 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 5284205 Query: 192 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 251 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 5284206 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 5284265 Query: 252 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 311 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 5284266 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 5284325 Query: 312 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 371 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 5284326 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 5284385 Query: 372 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgg 431 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 5284386 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggaggaggccatcgg 5284445 Query: 432 gtatgcatgggagctcctcacccaggt 458 | ||| |||||||||||||||||||| Sbjct: 5284446 atttgcctgggagctcctcacccaggt 5284472 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 454 caggtctacaaattgcccactgatagaatttatgcaacatactttggtggtgatgagaaa 513 ||||| ||||||||||| || |||||||||||||| || ||||||||||||||||||||| Sbjct: 5285402 caggtgtacaaattgcctaccgatagaatttatgcgacttactttggtggtgatgagaaa 5285461 Query: 514 gctggtctcgctcccgacactgagtcgaaaaacatatggttgaagtatctaccaaatgaa 573 ||| || ||||| || || |||||||| |||||||||||||| || ||||| || ||| Sbjct: 5285462 tttggacttgctcctgatacggagtcgaagaacatatggttgaaatacctacccaaagaa 5285521 Query: 574 agagttct 581 | |||||| Sbjct: 5285522 aaagttct 5285529 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 22315034 caccgccaccgccaccgccaccgc 22315011 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 14945189 caccgccaccgccaccgccaccgc 14945166 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 11477485 caccgccaccgccaccgccaccgc 11477508
>gb|AY104750.1| Zea mays PCO077049 mRNA sequence Length = 3244 Score = 377 bits (190), Expect = e-101 Identities = 319/362 (88%) Strand = Plus / Plus Query: 160 tggccgtcgagccccgtggtacccgtcgacgaccccacgctcttgttcgccaacgccggg 219 ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| || Sbjct: 228 tggccgtcgagtcccgtggtccccgtcgacgaccccacgctgctgttcgccaacgctgga 287 Query: 220 atgaaccagttcaagcccgtattcctcggcaccgcctccccggactcacagcttggccgc 279 ||||||||||||||||| || ||||||||||| || | |||||||| | ||| |||||| Sbjct: 288 atgaaccagttcaagccggtcttcctcggcacagcggcgccggactcgccgctcggccgc 347 Query: 280 ctgagccgcgcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgacctt 339 ||| ||| ||||| |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 348 ctgcaccgtgcctgtaacacccaaaagtgcatccgcgccggcgggaagcacaacgacctc 407 Query: 340 gacgacgtggggaaggacacgtaccaccacacctttttcgagatgctcgggaactggtcc 399 |||||||||||||| ||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 408 gacgacgtggggaatgacacctaccaccataccttcttcgagatgcttgggaactggtct 467 Query: 400 ttcggagactacttcaaggagggggccatcgggtatgcatgggagctcctcacccaggtc 459 ||||| ||||| |||||||||| ||||||| | | || |||||||| ||||||||||| Sbjct: 468 ttcggggactatttcaaggaggaggccatcagatgggcctgggagcttctcacccaggta 527 Query: 460 tacaaattgcccactgatagaatttatgcaacatactttggtggtgatgagaaagctggt 519 || ||||||||||| |||||||||||||| ||||||||||||||||||| |||| ||||| Sbjct: 528 tataaattgcccaccgatagaatttatgccacatactttggtggtgatgtgaaatctggt 587 Query: 520 ct 521 || Sbjct: 588 ct 589
>dbj|AK111163.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B04, full insert sequence Length = 3036 Score = 153 bits (77), Expect = 8e-34 Identities = 122/137 (89%) Strand = Plus / Plus Query: 294 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 353 ||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| || Sbjct: 309 caacacccagaagtgcatccgcgccggtggcaagcacaacgatctcgacgatgtgggcaa 368 Query: 354 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 413 ||||| |||||||||||||| ||||||||| | || |||||||| ||||| |||||||| Sbjct: 369 ggacagctaccaccacaccttcttcgagatgatgggcaactggtctttcggcgactactt 428 Query: 414 caaggagggggccatcg 430 |||| ||| |||||||| Sbjct: 429 caagaaggaggccatcg 445
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 133 bits (67), Expect = 7e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 296 acacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaagg 355 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | Sbjct: 2171056 acacccagaagtgcatccgcgcttccggcaagcacaacgaccttgaagacgtggggcgcg 2170997 Query: 356 acacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagacta 410 | || ||||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 2170996 atacctaccaccacacctttttcgagatgctcggcaactggtcgttcggcgacta 2170942 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||| ||||||||||||||| Sbjct: 2171128 ccaacgccggcatgaaccagttcaag 2171103
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 117 bits (59), Expect = 4e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 354 ||||| |||||||| ||||| || |||||||||||||||||||| || ||||| ||| | Sbjct: 1350746 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacctggaggacgttgggctg 1350687 Query: 355 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 414 ||| ||||||||||||| || ||||||||||| || |||||||| ||||| ||||||||| Sbjct: 1350686 gactcgtaccaccacacgttcttcgagatgctgggtaactggtctttcggcgactacttc 1350627 Query: 415 aag 417 ||| Sbjct: 1350626 aag 1350624 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 186 cgacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcc 236 ||||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 1350855 cgacgaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagcc 1350805
>ref|NM_209812.1| Eremothecium gossypii ADR363Cp (ADR363C), mRNA Length = 2871 Score = 117 bits (59), Expect = 4e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 354 ||||| |||||||| ||||| || |||||||||||||||||||| || ||||| ||| | Sbjct: 223 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacctggaggacgttgggctg 282 Query: 355 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 414 ||| ||||||||||||| || ||||||||||| || |||||||| ||||| ||||||||| Sbjct: 283 gactcgtaccaccacacgttcttcgagatgctgggtaactggtctttcggcgactacttc 342 Query: 415 aag 417 ||| Sbjct: 343 aag 345 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 186 cgacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcc 236 ||||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 114 cgacgaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagcc 164
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 321 cggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcga 380 |||||||||||||||||| || || |||||| | |||||||||||||||||||| ||||| Sbjct: 1925776 cggcaagcacaacgacctggaggaggtggggcacgacacgtaccaccacaccttcttcga 1925717 Query: 381 gatgctcgggaactggtccttcggagactacttcaaggagggggccatcgggtatgcatg 440 |||||| || |||||| |||||| ||||||||||||| | ||||||| ||| || || Sbjct: 1925716 gatgctgggcaactggagcttcggcgactacttcaaggccgaggccatccggtgggcgtg 1925657 Query: 441 ggagctcctc 450 |||||||||| Sbjct: 1925656 ggagctcctc 1925647
>ref|XM_318757.2| Anopheles gambiae str. PEST ENSANGP00000013174 (ENSANGG00000010685), partial mRNA Length = 2898 Score = 111 bits (56), Expect = 3e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 294 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 353 |||||| |||||||||||||| |||||||||||||||||||| || |||||||| || || Sbjct: 204 caacacgcagaagtgcatccgtgccggcggcaagcacaacgatctggacgacgtcggcaa 263 Query: 354 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 413 ||| |||||| ||||| || ||||||||||| || |||||||| || || |||||||| Sbjct: 264 ggatgtgtaccatcacacgttcttcgagatgctgggcaactggtcgtttggcgactactt 323 Query: 414 caag 417 |||| Sbjct: 324 caag 327 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 203 tgttcgccaacgccgggatgaaccagttcaagcc 236 |||||||||| || || ||||||||||||||||| Sbjct: 113 tgttcgccaatgcgggcatgaaccagttcaagcc 146
>ref|NM_001031056.1| Gallus gallus alanyl-tRNA synthetase like (AARSL), mRNA Length = 3367 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 325 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 384 |||||||| ||||| || |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 355 aagcacaatgacctggaggacgtgggccgtgacacctaccaccacaccttcttcgagatg 414 Query: 385 ctcgggaactggtccttcggagactacttcaaggagg 421 || |||||||||||||| || |||||||||||||||| Sbjct: 415 ctggggaactggtcctttggggactacttcaaggagg 451 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 217 gggatgaaccagttcaagcccgtattcctcggcac 251 ||||||||||||||||||||||| ||||| ||||| Sbjct: 247 gggatgaaccagttcaagcccgttttcctgggcac 281
>emb|AJ720883.1| Gallus gallus mRNA for hypothetical protein, clone 28n18 Length = 3367 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 325 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 384 |||||||| ||||| || |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 355 aagcacaatgacctggaggacgtgggccgtgacacctaccaccacaccttcttcgagatg 414 Query: 385 ctcgggaactggtccttcggagactacttcaaggagg 421 || |||||||||||||| || |||||||||||||||| Sbjct: 415 ctggggaactggtcctttggggactacttcaaggagg 451 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 217 gggatgaaccagttcaagcccgtattcctcggcac 251 ||||||||||||||||||||||| ||||| ||||| Sbjct: 247 gggatgaaccagttcaagcccgttttcctgggcac 281
>ref|NM_205934.1| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RB, transcript variant B (Aats-ala), mRNA Length = 3290 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 294 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 353 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 433 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 492 Query: 354 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 413 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 493 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 552 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 187 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 246 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 326 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 385 Query: 247 ggcaccgc 254 |||||||| Sbjct: 386 ggcaccgc 393
>ref|NM_078787.2| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RA, transcript variant A (Aats-ala), mRNA Length = 3151 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 294 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 353 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 294 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 353 Query: 354 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 413 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 354 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 413 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 187 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 246 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 187 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 246 Query: 247 ggcaccgc 254 |||||||| Sbjct: 247 ggcaccgc 254
>gb|AY069255.1| Drosophila melanogaster GM03058 full length cDNA Length = 3308 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 294 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 353 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 434 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 493 Query: 354 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 413 ||| || ||||| ||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 494 ggatgtctatcaccataccttctttgaaatgctgggaaactggtccttcggtgactactt 553 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 187 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 246 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 327 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 386 Query: 247 ggcaccgc 254 |||||||| Sbjct: 387 ggcaccgc 394
>gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, region 29C-29D, BAC clone BACR02I15, complete sequence Length = 186490 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 294 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 353 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 3407 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 3348 Query: 354 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 413 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 3347 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 3288 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 187 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 246 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 3514 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 3455 Query: 247 ggcaccgc 254 |||||||| Sbjct: 3454 ggcaccgc 3447
>gb|AC092220.1|AC092220 Drosophila melanogaster, chromosome 2L, region 28B-29X, BAC clone BACR15P08, complete sequence Length = 170649 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 294 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 353 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 24495 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 24554 Query: 354 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 413 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 24555 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 24614 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 187 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 246 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 24388 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 24447 Query: 247 ggcaccgc 254 |||||||| Sbjct: 24448 ggcaccgc 24455
>gb|AF188718.1|AF188718 Drosophila melanogaster alanyl-tRNA synthetase (alaS) mRNA, complete cds Length = 3117 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 294 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 353 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 275 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 334 Query: 354 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 413 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 335 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 394 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 187 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 246 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 168 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 227 Query: 247 ggcaccgc 254 |||||||| Sbjct: 228 ggcaccgc 235
>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete sequence Length = 308031 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 294 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 353 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 19569 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 19510 Query: 354 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 413 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 19509 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 19450 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 187 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 246 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 19676 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 19617 Query: 247 ggcaccgc 254 |||||||| Sbjct: 19616 ggcaccgc 19609
>gb|AC004423.1|AC004423 Drosophila melanogaster DNA sequence (P1 DS02110 (D147)), complete sequence Length = 79076 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 294 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 353 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 1911 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 1852 Query: 354 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 413 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 1851 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 1792 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 187 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 246 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 2018 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 1959 Query: 247 ggcaccgc 254 |||||||| Sbjct: 1958 ggcaccgc 1951
>ref|XM_756287.1| Ustilago maydis 521 hypothetical protein (UM05233.1) partial mRNA Length = 2973 Score = 93.7 bits (47), Expect = 6e-16 Identities = 131/159 (82%) Strand = Plus / Plus Query: 304 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 363 ||||||||||| || || || ||||| |||||||| |||||||| || |||||||| ||| Sbjct: 271 aagtgcatccgtgcaggtggtaagcataacgacctcgacgacgttggcaaggacacctac 330 Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggg 423 ||||| ||||||||||| ||||| || |||||||| || || || ||||||||| ||| | Sbjct: 331 caccatacctttttcgaaatgctgggcaactggtcgtttggcgattacttcaagaaggag 390 Query: 424 gccatcgggtatgcatgggagctcctcacccaggtctac 462 || || | | || |||||||| |||||| |||||||| Sbjct: 391 gctattgagatggcttgggagctgctcaccaaggtctac 429 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaagcccgtattcctcggca 250 |||||||||||||| |||||||||| ||| ||| | ||||| |||| Sbjct: 172 ttcgccaacgccggtatgaaccagtacaaacccatcttccttggca 217
>ref|XM_381082.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00906.1) partial mRNA Length = 2874 Score = 87.7 bits (44), Expect = 4e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 319 ggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttc 378 |||||||||||||| || |||||||| || || ||||| | || |||||||| || ||| Sbjct: 244 ggcggcaagcacaatgatcttgacgatgttggcaaggatagctatcaccacacattcttc 303 Query: 379 gagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgggtatgca 438 |||||| | || |||||||| ||||| |||||||||||| ||| |||||| ||| | Sbjct: 304 gagatgttgggtaactggtctttcggcgactacttcaagaaggaggccatttcatattct 363 Query: 439 tgggagctcctcacccaggtctac 462 ||||||||||||||| |||||||| Sbjct: 364 tgggagctcctcaccaaggtctac 387 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 209 ccaacgccgggatgaaccagttcaagcccgtattcctcggcaccg 253 ||||||| || |||||||||||||||||| | ||||||||||||| Sbjct: 134 ccaacgctggcatgaaccagttcaagcccatcttcctcggcaccg 178
>gb|AC125476.30| Medicago truncatula clone mth2-10e13, complete sequence Length = 153919 Score = 87.7 bits (44), Expect = 4e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 289 gcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtg 348 |||||||| | ||||||||| ||||| || || || |||||||| || ||||| |||||| Sbjct: 107106 gcctgcaatatccagaagtgtatccgagcaggtggtaagcacaatgatcttgatgacgtg 107165 Query: 349 gggaaggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagac 408 ||||| ||||| ||||| ||||| || || |||||||| || ||||||||||| || || Sbjct: 107166 gggaaagacacttaccatcacactttctttgagatgcttggtaactggtcctttggcgat 107225 Query: 409 tacttcaa 416 |||||||| Sbjct: 107226 tacttcaa 107233 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 481 atttatgcaacatactttggtggtgatgagaaagctggtct 521 ||||||| ||||| |||||||||||||||||| ||||||| Sbjct: 107578 atttatgttacatattttggtggtgatgagaaaactggtct 107618 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 481 atttatgcaacatactttggtggtgatgagaaagctggtct 521 |||||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 86971 atttatgccacatattttggcggtgatgagaaggctggtct 87011 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gggatgaaccagttcaagcc 236 |||||||||||||||||||| Sbjct: 107034 gggatgaaccagttcaagcc 107053
>ref|XM_500483.1| Yarrowia lipolytica CLIB122, YALI0B04180g predicted mRNA Length = 2883 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 304 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 363 |||||||| || ||||| || ||||||||||| || || || ||||| ||| ||||| Sbjct: 232 aagtgcattcgagccggaggaaagcacaacgatctggatgatgtgggacgagactcgtac 291 Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 418 ||||||||||| ||||||||||| || |||||||| || || ||||||||||||| Sbjct: 292 caccacaccttcttcgagatgctgggcaactggtcgtttggcgactacttcaagg 346 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 193 cccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 251 ||||| || ||||| ||||||||||| |||||||||| ||||||| | ||||| ||||| Sbjct: 121 cccaccctgttgtttgccaacgccggtatgaaccagtacaagcccattttcctgggcac 179
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 304 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 363 |||||||| || ||||| || ||||||||||| || || || ||||| ||| ||||| Sbjct: 553191 aagtgcattcgagccggaggaaagcacaacgatctggatgatgtgggacgagactcgtac 553132 Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 418 ||||||||||| ||||||||||| || |||||||| || || ||||||||||||| Sbjct: 553131 caccacaccttcttcgagatgctgggcaactggtcgtttggcgactacttcaagg 553077 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 193 cccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 251 ||||| || ||||| ||||||||||| |||||||||| ||||||| | ||||| ||||| Sbjct: 553302 cccaccctgttgtttgccaacgccggtatgaaccagtacaagcccattttcctgggcac 553244
>ref|XM_588170.2| PREDICTED: Bos taurus similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) (LOC510933), mRNA Length = 3299 Score = 75.8 bits (38), Expect = 1e-10 Identities = 104/126 (82%) Strand = Plus / Plus Query: 294 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 353 |||||| |||||||||||||| || |||||||| ||||| ||||| || |||||||| || Sbjct: 245 caacactcagaagtgcatccgggctggcggcaaacacaatgacctggatgacgtgggcaa 304 Query: 354 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 413 ||| || || |||||||| || |||||||| || ||||||||| ||||| ||||| Sbjct: 305 ggatgtctatcatcacaccttctttgagatgctgggctcctggtcctttggagattactt 364 Query: 414 caagga 419 |||||| Sbjct: 365 caagga 370
>ref|XM_687602.1| PREDICTED: Danio rerio similar to LOC443692 protein (LOC564258), mRNA Length = 2922 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 301 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 360 |||||||| |||| || || ||||| ||||| ||||| | || |||||||||||| Sbjct: 250 cagaagtgtgtccgtgctggaggcaaacacaatgacctacaggatgtggggaaggacgtt 309 Query: 361 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 418 ||||| || ||||| ||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct: 310 taccatcataccttcttcgagatgctggggaactggtcattcggggactacttcaagg 367
>emb|BX571958.11| Zebrafish DNA sequence from clone DKEY-240E12 in linkage group 22, complete sequence Length = 221392 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 301 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 360 |||||||| |||| || || ||||| ||||| ||||| | || |||||||||||| Sbjct: 45416 cagaagtgtgtccgtgctggaggcaaacacaatgacctacaggatgtggggaaggacgtt 45357 Query: 361 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 418 ||||| || ||||| ||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct: 45356 taccatcataccttcttcgagatgctggggaactggtcattcggggactacttcaagg 45299
>emb|CR769772.26| Zebrafish DNA sequence from clone CH211-12H2 in linkage group 2, complete sequence Length = 212945 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 301 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 360 |||||||| |||| || || ||||| ||||| ||||| | || |||||||||||| Sbjct: 132537 cagaagtgtgtccgtgctggaggcaaacacaatgacctacaggatgtggggaaggacgtt 132596 Query: 361 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 418 ||||| || ||||| ||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct: 132597 taccatcataccttcttcgagatgctggggaactggtcattcggggactacttcaagg 132654
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 73.8 bits (37), Expect = 6e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacc 372 |||||||||||||||||||||||||| || |||| || | | || |||||||||| Sbjct: 841512 cgcgccggcggcaagcacaacgacctcgagaacgtcggctacaccgcgcgccaccacacc 841571 Query: 373 tttttcgagatgctcgggaactggtccttcggagactacttcaag 417 || ||||||||||| || |||||||| ||||| |||||||||||| Sbjct: 841572 ttcttcgagatgctgggcaactggtcgttcggcgactacttcaag 841616
>emb|AL590442.1|CNS07EG9 chromosome II of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 197426 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/97 (84%) Strand = Plus / Minus Query: 325 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 384 |||||||| ||||| || || ||||| |||||||||||||| ||||| | ||| |||||| Sbjct: 181866 aagcacaatgacctggatgatgtgggaaaggacacgtaccatcacacatattttgagatg 181807 Query: 385 ctcgggaactggtccttcggagactacttcaaggagg 421 | ||||| ||||| || |||||||||||||| |||| Sbjct: 181806 atggggaattggtcgtttggagactacttcaaagagg 181770
>ref|XM_571590.1| Cryptococcus neoformans var. neoformans JEC21 alanine-tRNA ligase (CNF02520) partial mRNA Length = 3234 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 328 cacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatgctc 387 |||||||||||||||||||| || |||||||| |||||||| || || || || ||||| Sbjct: 510 cacaacgaccttgacgacgtaggaaaggacacttaccaccatactttctttgaaatgctt 569 Query: 388 gggaactggtccttcggagactacttcaagg 418 || |||||||| ||||| || || ||||||| Sbjct: 570 ggaaactggtcattcggcgattatttcaagg 600
>emb|AJ720131.1| Gallus gallus mRNA for hypothetical protein, clone 11d4 Length = 3107 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 294 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 353 |||||| |||||||||||||| || || ||||||||||| ||||| || || ||||| || Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacctggatgatgtgggaaa 381 Query: 354 ggacacgtaccaccacacctttttcgagatg 384 ||| |||||||||||||| ||||||||| Sbjct: 382 ggatgtctaccaccacaccttcttcgagatg 412
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 300 ccagaagtgcatccgcgccggcggcaagcacaacgacct 338 |||||||||| |||||||||||||||||||||||||||| Sbjct: 5218055 ccagaagtgcgtccgcgccggcggcaagcacaacgacct 5218017 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 188 acgaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 234 |||||||||| || ||||| ||||||| |||||||||||||||||| Sbjct: 5218152 acgaccccaccctgctgttcaccaacgcggggatgaaccagttcaag 5218106
>ref|NM_001005836.1| Gallus gallus alanyl-tRNA synthetase (AARS), mRNA Length = 3107 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 294 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 353 |||||| |||||||||||||| || || ||||||||||| ||||| || || ||||| || Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacctggatgatgtgggaaa 381 Query: 354 ggacacgtaccaccacacctttttcgagatg 384 ||| |||||||||||||| ||||||||| Sbjct: 382 ggatgtctaccaccacaccttcttcgagatg 412
>gb|BC033273.1| Mus musculus alanyl-tRNA synthetase, mRNA (cDNA clone MGC:25868 IMAGE:4196789), complete cds Length = 4891 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 591 Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 592 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 651 Query: 418 ga 419 || Sbjct: 652 ga 653 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaa 233 ||||||||||| || |||||||||||||| Sbjct: 439 ttcgccaacgctggcatgaaccagttcaa 467
>ref|NM_146217.3| Mus musculus alanyl-tRNA synthetase (Aars), mRNA Length = 4891 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 591 Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 592 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 651 Query: 418 ga 419 || Sbjct: 652 ga 653 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaa 233 ||||||||||| || |||||||||||||| Sbjct: 439 ttcgccaacgctggcatgaaccagttcaa 467
>gb|AY223875.1| Mus musculus alanyl-tRNA synthase (Aars) mRNA, complete cds Length = 3654 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 597 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 656 Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 657 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 716 Query: 418 ga 419 || Sbjct: 717 ga 718 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaa 233 ||||||||||| || |||||||||||||| Sbjct: 504 ttcgccaacgctggcatgaaccagttcaa 532
>dbj|AK158139.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930035D01 product:alanyl-tRNA synthetase, full insert sequence Length = 3677 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 606 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 665 Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 666 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 725 Query: 418 ga 419 || Sbjct: 726 ga 727 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaa 233 ||||||||||| || |||||||||||||| Sbjct: 513 ttcgccaacgctggcatgaaccagttcaa 541
>dbj|AK150227.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530145P07 product:alanyl-tRNA synthetase, full insert sequence Length = 3639 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 585 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 644 Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 645 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 704 Query: 418 ga 419 || Sbjct: 705 ga 706 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaa 233 ||||||||||| || |||||||||||||| Sbjct: 492 ttcgccaacgctggcatgaaccagttcaa 520
>dbj|AK052744.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630041L13 product:similar to ALARS A [Caenorhabditis elegans], full insert sequence Length = 2222 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 325 Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 326 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 385 Query: 418 ga 419 || Sbjct: 386 ga 387 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaa 233 ||||||||||| || |||||||||||||| Sbjct: 173 ttcgccaacgctggcatgaaccagttcaa 201
>dbj|AK044451.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930013P06 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3463 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 408 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 467 Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 468 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 527 Query: 418 ga 419 || Sbjct: 528 ga 529 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaa 233 ||||||||||| || |||||||||||||| Sbjct: 315 ttcgccaacgctggcatgaaccagttcaa 343
>dbj|AK085725.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730028M10 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3653 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 598 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 657 Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 658 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 717 Query: 418 ga 419 || Sbjct: 718 ga 719 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaa 233 ||||||||||| || |||||||||||||| Sbjct: 505 ttcgccaacgctggcatgaaccagttcaa 533
>dbj|AB097816.1| Mesocricetus auratus mRNA for alanyl trna synthetase, complete cds Length = 2907 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 |||||||| |||||||| || || ||||| ||||||||||| || || ||||| |||||| Sbjct: 214 acccagaaatgcatccgtgctgggggcaaacacaacgacctggatgatgtgggcaaggac 273 Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||||||||| || |||||||| || |||||| || ||||| || |||||| Sbjct: 274 gtctaccaccacaccttctttgagatgctgggctcctggtcttttggagattatttcaag 333 Query: 418 ga 419 || Sbjct: 334 ga 335
>ref|XM_214690.3| PREDICTED: Rattus norvegicus alanyl-tRNA synthetase (predicted) (Aars_predicted), mRNA Length = 3639 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 ||||||||||||||||| ||||| ||||| ||||| ||||| || |||||||| || || Sbjct: 590 acccagaagtgcatccgagccgggggcaaacacaatgacctggatgacgtgggcaaagat 649 Query: 358 acgtaccaccacacctttttcgagatgct 386 |||||||||||||| || |||||||| Sbjct: 650 gtctaccaccacaccttctttgagatgct 678 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaa 233 ||||||||||| || |||||||||||||| Sbjct: 497 ttcgccaacgcaggcatgaaccagttcaa 525
>gb|AC093451.25| Mus musculus strain C57BL/6J chromosome 8 clone rp23-340n2, complete sequence Length = 198760 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 80695 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 80754 Query: 358 acgtaccaccacacctttttcgagatgct 386 ||||||||||| || || |||||||| Sbjct: 80755 gtctaccaccacactttctttgagatgct 80783
>gb|AC140276.3| Mus musculus BAC clone RP23-336J13 from 8, complete sequence Length = 211518 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 166511 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 166570 Query: 358 acgtaccaccacacctttttcgagatgct 386 ||||||||||| || || |||||||| Sbjct: 166571 gtctaccaccacactttctttgagatgct 166599
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 325 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 384 |||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 296393 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacaccttttttgagatg 296334
>gb|AC084046.13| Trypanosoma brucei chromosome 6 clone RPCI93-3D8, complete sequence Length = 154240 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 325 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 384 |||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 89540 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacaccttttttgagatg 89481
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 363 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggaggg 422 |||||||||||| ||||| |||||||| |||||||| ||||| ||||| |||||| ||| Sbjct: 1996654 ccaccacaccttcttcgaaatgctcggcaactggtcgttcggcgactatttcaagaagga 1996713 Query: 423 ggccatcg 430 ||||||| Sbjct: 1996714 cgccatcg 1996721
>ref|XM_821287.1| Trypanosoma brucei TREU927 clone RPCI93-3D8 alanyl-tRNA synthetase (Tb927.6.700) partial mRNA Length = 2901 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 325 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 384 |||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 250 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacaccttttttgagatg 309
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 419 ||||||||||| |||||||||||||| |||| || ||||| |||||||||||||| Sbjct: 1821452 caccacaccttcttcgagatgctcggcaacttctcgttcggcgactacttcaagga 1821507 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 1821401 cgcgccggcggcaagcacaacgacct 1821426
>dbj|AK036738.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830169C09 product:alanyl-tRNA synthetase, full insert sequence Length = 4191 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 325 Query: 358 acgtaccaccacacctttttcgagatgc 385 ||||||||||| || || ||||||| Sbjct: 326 gtctaccaccacactttctttgagatgc 353 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaa 233 ||||||||||| || |||||||||||||| Sbjct: 173 ttcgccaacgctggcatgaaccagttcaa 201
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 ||||||||||||||| | ||||| ||||| || |||||||| ||||| |||||||||||| Sbjct: 5207769 acgtaccaccacaccatgttcgaaatgctgggcaactggtcattcggtgactacttcaag 5207710
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 202 ttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcgg 248 |||||| |||||||||||||||||||||||||| ||| |||||||| Sbjct: 3553776 ttgttcaccaacgccgggatgaaccagttcaaggacgttttcctcgg 3553730 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 301 cagaagtgcatccgcgccggcggcaagcacaacgacct 338 ||||| ||| |||||||||||||||||||||||||||| Sbjct: 3553692 cagaaatgcgtccgcgccggcggcaagcacaacgacct 3553655 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 364 caccacacctttttcgagatgctcgg 389 ||||||||||| |||||||||||||| Sbjct: 3553629 caccacaccttcttcgagatgctcgg 3553604
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 361 taccaccacacctttttcgagatgctcgggaactggtccttcggagactac 411 |||||||||||||| ||| ||||||| ||||||||||||||||| ||||| Sbjct: 20443459 taccaccacaccttcttcaagatgcttaggaactggtccttcggatactac 20443409 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgct 63 |||||||||||||||||| |||||| Sbjct: 31830006 caccgccaccgccaccgccaccgct 31830030 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 accgccaccgccaccgctaccgctaccg 67 ||||||||||||||||| ||||| |||| Sbjct: 31830001 accgccaccgccaccgccaccgccaccg 31830028 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 30452519 caccgccaccgccaccgccaccgc 30452496 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 27136998 caccgccaccgccaccgccaccgc 27136975 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 11884756 caccgccaccgccaccgccaccgc 11884733 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 10522546 caccgccaccgccaccgccaccgc 10522523
>dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0069D13 Length = 157088 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 361 taccaccacacctttttcgagatgctcgggaactggtccttcggagactac 411 |||||||||||||| ||| ||||||| ||||||||||||||||| ||||| Sbjct: 85883 taccaccacaccttcttcaagatgcttaggaactggtccttcggatactac 85833
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 188 acgaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 234 |||| ||||||||||| ||| |||||||||| ||||||||||||||| Sbjct: 3572278 acgatcccacgctcttattcaccaacgccggtatgaaccagttcaag 3572232
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggg 423 ||||| ||||| |||||||||||||| || | |||||||| |||||||||||| ||| | Sbjct: 232656 caccataccttcttcgagatgctcggcaatttctccttcggcgactacttcaagaaggag 232715 Query: 424 gccatcgggtatgcatgggagctcctcacc 453 ||||| | | ||| |||||| |||||||| Sbjct: 232716 gccattgcctttgcctgggagttcctcacc 232745 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 299 cccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtgggg 351 ||||||||||| | || ||||| || |||||||||||||| || |||||||| Sbjct: 232591 cccagaagtgcgtgcgggccggggggaagcacaacgacctggagaacgtgggg 232643 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 190 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 234 ||||| |||||| | || ||||| ||||| ||||||||||||||| Sbjct: 232497 gacccgacgctcctttttgccaatgccggcatgaaccagttcaag 232541
>ref|NM_186912.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4203 Score = 60.0 bits (30), Expect = 9e-06 Identities = 102/126 (80%) Strand = Plus / Plus Query: 388 gggaactggtccttcggagactacttcaaggagggggccatcgggtatgcatgggagctc 447 |||||||||||||| || |||||||||||||||| ||| || || | ||| ||||||||| Sbjct: 256 gggaactggtcctttggggactacttcaaggaggaggcaattggatttgcgtgggagctc 315 Query: 448 ctcacccaggtctacaaattgcccactgatagaatttatgcaacatactttggtggtgat 507 | || |||||||| ||||| ||||||||||| || ||||| || || |||||| Sbjct: 316 ttgactaaggtctacgaattggaggttgatagaatttttgtgacatatttcggaggtgat 375 Query: 508 gagaaa 513 |||||| Sbjct: 376 gagaaa 381
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 ||||||||||| ||||||||||| ||||||| |||||||| ||||| |||||| Sbjct: 2184119 caccacaccttcttcgagatgctggggaacttctccttcggcgactatttcaag 2184066
>ref|XM_445923.1| Candida glabrata CBS138, CAGL0E05390g partial mRNA Length = 2871 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 325 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 384 |||||||||||| | || || || || |||||| | ||||||||||| || || || ||| Sbjct: 253 aagcacaacgacttggaggatgtcggtaaggactcctaccaccacactttctttgaaatg 312 Query: 385 ctcgggaactggtccttcggagactacttcaaggagggggccatcg 430 | || |||||||||||||| |||||||||||| ||| ||| |||| Sbjct: 313 ttgggtaactggtccttcggtgactacttcaagaaggaggctatcg 358
>ref|XM_789424.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl-tRNA synthetase (LOC589790), mRNA Length = 3300 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacga 344 |||| ||||||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 220 aacagccagaagtgcatccgtgccggtggcaagcacaatgacctggacga 269 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaagccc 237 |||||||| || || |||||||||||||||||| Sbjct: 130 ttcgccaatgcgggtatgaaccagttcaagccc 162
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 325 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 384 |||||||||||| | || || || || |||||| | ||||||||||| || || || ||| Sbjct: 527098 aagcacaacgacttggaggatgtcggtaaggactcctaccaccacactttctttgaaatg 527039 Query: 385 ctcgggaactggtccttcggagactacttcaaggagggggccatcg 430 | || |||||||||||||| |||||||||||| ||| ||| |||| Sbjct: 527038 ttgggtaactggtccttcggtgactacttcaagaaggaggctatcg 526993
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 301 cagaagtgcatccgcgccggcggcaagcacaacgacct 338 ||||| ||| |||||||||||||||||||||||||||| Sbjct: 1704450 cagaaatgcgtccgcgccggcggcaagcacaacgacct 1704487
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 301 cagaagtgcatccgcgccggcggcaagcacaacgacct 338 ||||||||| | |||||||||||||||||||||||||| Sbjct: 4336125 cagaagtgcgtgcgcgccggcggcaagcacaacgacct 4336088 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 418 |||||||| || ||||||||| | ||||||| |||||||| ||||||||||||| Sbjct: 4336062 caccacacgttcttcgagatgatggggaacttctccttcggcgactacttcaagg 4336008
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 60.0 bits (30), Expect = 9e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 320 gcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcg 379 ||||||||||||||||||| || || || || | ||||| || || || ||| | |||| Sbjct: 1322150 gcggcaagcacaacgacctcgaagaggtaggccatgacacctatcatcataccatgttcg 1322209 Query: 380 agatgctcgggaactggtccttcggagactacttcaag 417 |||||||||| |||||||| ||||| || ||||||||| Sbjct: 1322210 agatgctcggcaactggtcgttcggcgattacttcaag 1322247 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 189 cgaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 234 ||||||||||||| ||||| |||| ||||| ||||| ||||||||| Sbjct: 1322034 cgaccccacgctcatgttcaccaatgccggcatgaatcagttcaag 1322079
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 299 cccagaagtgcatccgcgccggcggcaagcacaacgaccttgacga 344 ||||||||||| | || ||||||||||||||||||||||| ||||| Sbjct: 2140860 cccagaagtgcgtgcgggccggcggcaagcacaacgacctggacga 2140815 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 124 ttcatcgacttcttcaagtccaag 147 |||||||||||||||||||||||| Sbjct: 2141020 ttcatcgacttcttcaagtccaag 2140997 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 367 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagg 421 |||||||| ||||||||||| || |||| |||||| |||||||||||||||| Sbjct: 2140792 cacaccttcttcgagatgctgggcaacttcagcttcggcgactacttcaaggagg 2140738 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||| ||||||||||||||| Sbjct: 2140935 ccaacgccggcatgaaccagttcaag 2140910
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 334 gaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatgctcgggaac 393 |||||||||||||| || |||||||| |||||||| || || || || ||||| || ||| Sbjct: 731829 gaccttgacgacgtaggaaaggacacttaccaccatactttctttgaaatgcttggaaac 731770 Query: 394 tggtccttcggagactacttcaagg 418 ||||| ||||| || || ||||||| Sbjct: 731769 tggtcattcggcgattatttcaagg 731745
>gb|BC073734.1| Xenopus laevis hypothetical protein LOC443692, mRNA (cDNA clone IMAGE:5085483), partial cds Length = 4625 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 367 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 419 |||||||| || |||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 428 cacaccttctttgagatgcttgggaactggtccttcggggattactttaagga 480
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 190 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 234 ||||| |||||| |||||||||| ||||| ||||||||||||||| Sbjct: 163902 gacccaacgctcctgttcgccaatgccggcatgaaccagttcaag 163946 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 299 cccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtgggg 351 |||||||||| |||| ||||| ||||||||||||||||| || |||||||| Sbjct: 163996 cccagaagtgtgtccgggccggtggcaagcacaacgacctggagaacgtgggg 164048
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 367 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 419 |||||||| |||||||||||||| |||| || ||||| |||||||||||||| Sbjct: 1420501 cacaccttcttcgagatgctcggcaacttctcgttcggcgactacttcaagga 1420553 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaa 332 |||||||||||||||||||| Sbjct: 1420447 cgcgccggcggcaagcacaa 1420466
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggag 420 ||||||||||| |||||||||||||| || | |||||||| ||||| ||||||||| Sbjct: 166283 caccacaccttcttcgagatgctcggcaatttctccttcggcgactatttcaaggag 166227 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgacct 338 ||||||||||||||||| |||||||| Sbjct: 166334 cgcgccggcggcaagcataacgacct 166309
>emb|X59957.1|RMRECA R.meliloti recA gene and alaS gene 5' end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 2639 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggag 420 ||||||||||| |||||||||||||| || | |||||||| ||||| ||||||||| Sbjct: 2291 caccacaccttcttcgagatgctcggcaatttctccttcggcgactatttcaaggag 2347 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacgacct 338 ||||||||||||||||| |||||||| Sbjct: 2240 cgcgccggcggcaagcataacgacct 2265
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacc 372 |||||||||||||||||||||||||| || |||| || | | || |||||| ||| Sbjct: 3072342 cgcgccggcggcaagcacaacgacctggaaaacgtcggctacaccgcgcgccaccatacc 3072283 Query: 373 tttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||||||||| || |||||| ||| || |||||||||||| Sbjct: 3072282 tttttcgagatgctgggcaactggagctttggcgactacttcaag 3072238
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 367 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 419 |||||||| |||||||||||||| |||| || ||||| |||||||||||||| Sbjct: 1947109 cacaccttcttcgagatgctcggcaacttctcgttcggcgactacttcaagga 1947161 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 1947055 cgcgccggcggcaagcacaacgacct 1947080 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gcgccggcggcaagcacaac 333 |||||||||||||||||||| Sbjct: 1809835 gcgccggcggcaagcacaac 1809816
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 186 cgacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 234 ||||||||| ||||| ||||| | |||||||||||||||||||||||| Sbjct: 598556 cgacgacccgacgctgctgttcacgaacgccgggatgaaccagttcaag 598508 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacga 335 ||||||||||||||||||||||| Sbjct: 598444 cgcgccggcggcaagcacaacga 598422 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 721048 caccgccaccgccaccgccaccgc 721071
>gb|AE005920.1| Caulobacter crescentus CB15 section 246 of 359 of the complete genome Length = 10062 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 363 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 419 |||||||||||| ||||||||||| || |||| || ||||| |||||||||||||| Sbjct: 9685 ccaccacaccttcttcgagatgctgggcaacttctcgttcggcgactacttcaagga 9629 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 304 aagtgcatccgcgccggcggcaagcacaacgacct 338 |||||| | |||||||||||||||||||||||||| Sbjct: 9744 aagtgcgttcgcgccggcggcaagcacaacgacct 9710
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 369 cacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccat 428 |||||| ||| |||||||||| |||| |||||||| |||||||||||||| | |||||| Sbjct: 671126 caccttcttccagatgctcggcaacttctccttcggcgactacttcaaggaagaggccat 671067 Query: 429 c 429 | Sbjct: 671066 c 671066
>emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1292H11, complete sequence Length = 152632 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 390 gaactggtccttcggagactacttcaaggagg 421 ||||||||||||||| |||||||||||||||| Sbjct: 130999 gaactggtccttcggggactacttcaaggagg 130968
>gb|AE011806.1| Xanthomonas axonopodis pv. citri str. 306, section 184 of 469 of the complete genome Length = 10294 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 363 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggaggg 422 |||||| ||||| ||||| |||||||| |||||||| || || |||||||||||| ||| Sbjct: 3094 ccaccataccttcttcgaaatgctcggcaactggtcgtttggcgactacttcaagaagga 3153 Query: 423 ggccatcg 430 ||||||| Sbjct: 3154 cgccatcg 3161
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 419 ||||||||||| ||||||||||| || |||| || ||||| |||||||||||||| Sbjct: 3880179 caccacaccttcttcgagatgctgggcaacttctcgttcggcgactacttcaagga 3880234 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacga 335 ||||||||||||||||||||||| Sbjct: 3880128 cgcgccggcggcaagcacaacga 3880150
>gb|AY017381.1| Fibrobacter succinogenes S85 alanyl-tRNA synthase gene, partial cds Length = 171 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 283 agccgcgcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgac 342 |||||||| ||||||| |||||||||| |||||| ||| |||||||||||||| ||| Sbjct: 64 agccgcgcatgcaacagccagaagtgcctccgcgtgtccggtaagcacaacgacctcgac 123 Query: 343 gacgtggg 350 | |||||| Sbjct: 124 gtcgtggg 131
>gb|AF332359.1|AF332359 Fibrobacter succinogenes S85 alanyl-tRNA synthase gene, partial cds Length = 171 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 283 agccgcgcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgac 342 |||||||| ||||||| |||||||||| |||||| ||| |||||||||||||| ||| Sbjct: 64 agccgcgcatgcaacagccagaagtgcctccgcgtgtccggtaagcacaacgacctcgac 123 Query: 343 gacgtggg 350 | |||||| Sbjct: 124 gtcgtggg 131
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 367 cacacctttttcgagatgctcgggaactggtccttcggagacta 410 ||||| ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 173098 cacacttttttcgagatgctcggtaactggtcgttcggtgacta 173141 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 190 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 234 ||||| ||||| ||||| |||| ||||| ||||||||||||||| Sbjct: 172936 gacccgacgctgctgttcaccaatgccggtatgaaccagttcaag 172980
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 390 gaactggtccttcggagactacttcaaggagg 421 ||||||||||||||| |||||||||||||||| Sbjct: 1471975 gaactggtccttcggggactacttcaaggagg 1471944 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 34353837 caccgccaccgccaccgccaccgc 34353814 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 21794339 caccgccaccgccaccgccaccgc 21794316 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 21257299 caccgccaccgccaccgccaccgc 21257322 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 41 ccgccaccgccaccgctaccgctaccgtcggc 72 |||||||||||||||| ||||| |||| |||| Sbjct: 21257295 ccgccaccgccaccgccaccgccaccgccggc 21257326 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 18609984 caccgccaccgccaccgccaccgc 18610007
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 388 gggaactggtccttcggagactacttcaaggagggggccatcgggtatgcatgggagctc 447 |||||||||||||| || |||||||||||||||| ||| || || | ||| ||||||||| Sbjct: 8975648 gggaactggtcctttggggactacttcaaggaggaggcaattggatttgcgtgggagctc 8975589 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 ccgccaccgccaccgctaccgc 62 |||||||||||||||||||||| Sbjct: 23737489 ccgccaccgccaccgctaccgc 23737510 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 21323617 caccgccaccgccaccgccaccgc 21323640 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 9109449 caccgccaccgccaccgccaccgc 9109472 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 4922160 caccgccaccgccaccgccaccgc 4922183 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 4613885 caccgccaccgccaccgccaccgc 4613908 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 3710343 caccgccaccgccaccgccaccgc 3710366
>dbj|AP004176.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1057_E05 Length = 103229 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 388 gggaactggtccttcggagactacttcaaggagggggccatcgggtatgcatgggagctc 447 |||||||||||||| || |||||||||||||||| ||| || || | ||| ||||||||| Sbjct: 101805 gggaactggtcctttggggactacttcaaggaggaggcaattggatttgcgtgggagctc 101746
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 299 cccagaagtgcatccgcgccggcggcaagcacaacgacct 338 |||||||| || | |||||||||||||||||||||||||| Sbjct: 25552 cccagaagagcgttcgcgccggcggcaagcacaacgacct 25591
>dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1354_H07 Length = 157974 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 388 gggaactggtccttcggagactacttcaaggagggggccatcgggtatgcatgggagctc 447 |||||||||||||| || |||||||||||||||| ||| || || | ||| ||||||||| Sbjct: 27091 gggaactggtcctttggggactacttcaaggaggaggcaattggatttgcgtgggagctc 27032
>emb|BX649641.19| Zebrafish DNA sequence from clone CH211-223O1 in linkage group 18, complete sequence Length = 141018 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 354 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 99718 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 99777 Query: 355 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 414 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 99778 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 99837 Query: 415 aagg 418 |||| Sbjct: 99838 aagg 99841
>emb|X59956.1|RLRECA R.leguminosarum recA gene and alaS gene 5'end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 1841 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 370 acctttttcgagatgctcgggaactggtccttcggagactacttcaaggag 420 ||||| |||||||||||||| |||| |||||||| ||||| ||||||||| Sbjct: 1500 accttcttcgagatgctcggcaacttctccttcggcgactatttcaaggag 1550 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||| ||||||||||||||||||||| Sbjct: 1443 cgcgtcggcggcaagcacaacgacct 1468
>gb|BC097014.1| Danio rerio zgc:113920, mRNA (cDNA clone IMAGE:7448172), complete cds Length = 1983 Score = 54.0 bits (27), Expect = 5e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 354 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 367 Query: 355 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 414 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 368 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 427 Query: 415 aag 417 ||| Sbjct: 428 aag 430
>ref|NM_001040035.1| Danio rerio zgc:113920 (zgc:113920), mRNA Length = 1983 Score = 54.0 bits (27), Expect = 5e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 354 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 367 Query: 355 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 414 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 368 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 427 Query: 415 aag 417 ||| Sbjct: 428 aag 430
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgaccttgacgacgt 347 |||||||||||||||||||||||||| ||| |||| Sbjct: 160237 cgcgccggcggcaagcacaacgacctcgacaacgt 160203
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggg 423 ||||||||||| ||||| ||||| || |||||||| ||||| ||||| |||||| ||| Sbjct: 3141773 caccacaccttcttcgaaatgctaggcaactggtcgttcggcgactatttcaagaaggac 3141714 Query: 424 gccatcg 430 ||||||| Sbjct: 3141713 gccatcg 3141707 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 tcaccgccaccgccaccgctaccgc 62 ||||||||||||||||||| ||||| Sbjct: 3889677 tcaccgccaccgccaccgccaccgc 3889701
>gb|AE012274.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 182 of 460 of the complete genome Length = 10188 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 363 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||||||| ||||||||| | || |||||||| ||||| || ||||||||| Sbjct: 351 ccaccacaccttcttcgagatgttgggcaactggtcgttcggtgattacttcaag 405
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 363 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 ||||||||| |||||||||||||| || |||||| ||| || |||||||||||| Sbjct: 615240 ccaccacacttttttcgagatgctgggcaactggagctttggcgactacttcaag 615186 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 3628849 caccgccaccgccaccgccaccgc 3628826
>ref|XM_702496.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 3 (LOC559189), mRNA Length = 3672 Score = 54.0 bits (27), Expect = 5e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 354 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 364 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 423 Query: 355 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 414 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 424 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 483 Query: 415 aag 417 ||| Sbjct: 484 aag 486 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 190 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaagccc 237 ||||||||||| | |||||||| ||||| |||||||| || |||||| Sbjct: 259 gaccccacgctgctcttcgccaatgccggaatgaaccaatttaagccc 306
>ref|XM_679559.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 1 (LOC559189), mRNA Length = 3613 Score = 54.0 bits (27), Expect = 5e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 354 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 305 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 364 Query: 355 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 414 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 365 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 424 Query: 415 aag 417 ||| Sbjct: 425 aag 427 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 190 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaagccc 237 ||||||||||| | |||||||| ||||| |||||||| || |||||| Sbjct: 200 gaccccacgctgctcttcgccaatgccggaatgaaccaatttaagccc 247
>gb|AF399933.1|AF399933 Xanthomonas campestris RecA gene cluster, complete sequence Length = 3061 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 363 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||||||| ||||||||| | || |||||||| ||||| || ||||||||| Sbjct: 2913 ccaccacaccttcttcgagatgttgggcaactggtcgttcggtgattacttcaag 2967
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 363 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||||||| ||||||||| | || |||||||| ||||| || ||||||||| Sbjct: 3038023 ccaccacaccttcttcgagatgttgggcaactggtcgttcggtgattacttcaag 3037969
>gb|AE004524.1| Pseudomonas aeruginosa PAO1, section 85 of 529 of the complete genome Length = 11749 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 300 ccagaagtgcatccgcgccggcggcaagcacaacgacct 338 |||||| ||| | |||||||||||||||||||||||||| Sbjct: 9210 ccagaaatgcgtgcgcgccggcggcaagcacaacgacct 9248 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 203 tgttcgccaacgccgggatgaaccagttcaag 234 ||||| ||||||| || ||||||||||||||| Sbjct: 9128 tgttcaccaacgcgggcatgaaccagttcaag 9159
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 300 ccagaagtgcatccgcgccggcggcaagcacaacgacct 338 |||||||||| | |||||||| ||||||||||||||||| Sbjct: 4161016 ccagaagtgcgtgcgcgccggtggcaagcacaacgacct 4160978 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 203 tgttcgccaacgccgggatgaaccagttcaag 234 ||||| |||||||||| ||||||||||||||| Sbjct: 4161098 tgttcaccaacgccggcatgaaccagttcaag 4161067 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 3967939 caccgccaccgccaccgccaccgccaccg 3967911 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 ccaccacacctttttcgagatgct 386 |||||||||||| ||||||||||| Sbjct: 4160953 ccaccacaccttcttcgagatgct 4160930 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 40 accgccaccgccaccgctaccgctaccg 67 ||||||||||||||||| ||||| |||| Sbjct: 3967944 accgccaccgccaccgccaccgccaccg 3967917 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 3967933 caccgccaccgccaccgccaccgc 3967910
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggg 423 ||||||||||| ||||| ||||| || |||||||| ||||| ||||| |||||| ||| Sbjct: 3149081 caccacaccttcttcgaaatgctaggcaactggtcgttcggcgactatttcaagaaggac 3149022 Query: 424 gccatcg 430 ||||||| Sbjct: 3149021 gccatcg 3149015
>gb|AF011922.1|AF011922 Pseudomonas aeruginosa aru gene cluster, ArgR regulatory protein (argR), succinylornithine aminotransferase (aruC), arginine/ornithine succinyltransferase AI subunit (aruF), arginine/ornithine succinyltransferase AII subunit (aruG), succinylglutamate 5-semialdehyde dehydrogenase (aruD), succinylarginine dihydrolase (aruB), succinylglutamate desuccinylase (aruE) genes, complete cds; and alanine tRNA synthetase (alaS) gene, partial cds Length = 12949 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 300 ccagaagtgcatccgcgccggcggcaagcacaacgacct 338 |||||| ||| | |||||||||||||||||||||||||| Sbjct: 12588 ccagaaatgcgtgcgcgccggcggcaagcacaacgacct 12626 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 203 tgttcgccaacgccgggatgaaccagttcaag 234 ||||| ||||||| || ||||||||||||||| Sbjct: 12506 tgttcaccaacgcgggcatgaaccagttcaag 12537
>gb|BC071378.1| Danio rerio alanyl-tRNA synthetase, mRNA (cDNA clone IMAGE:6895974), partial cds Length = 2471 Score = 54.0 bits (27), Expect = 5e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 354 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 410 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 469 Query: 355 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 414 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 470 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 529 Query: 415 aag 417 ||| Sbjct: 530 aag 532 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 190 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaagccc 237 ||||||||||| | |||||||| ||||| |||||||| || |||||| Sbjct: 305 gaccccacgctgctcttcgccaatgccggaatgaaccaatttaagccc 352
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||||||||||||| Sbjct: 2795393 ccaacgccgggatgaaccagttcaag 2795368
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||| || |||||||||||||| |||| || ||||| |||||||||||| Sbjct: 1524992 caccacacgttcttcgagatgctcggcaacttctcgttcggcgactacttcaag 1525045 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacgacct 338 ||||| |||||||||||||||||||| Sbjct: 1524941 cgcgcgggcggcaagcacaacgacct 1524966
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 1179567 cgcgccggcggcaagcacaacgacct 1179542
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 906195 cgcgccggcggcaagcacaacgacct 906220
>ref|XM_742102.1| Aspergillus fumigatus Af293 alanyl-tRNA synthetase (Afu8g03880) partial mRNA Length = 3036 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 301 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 360 ||||||||||| || || ||||| || ||||| || | ||||||||||| ||||||| Sbjct: 385 cagaagtgcattcgtgctggcggaaaacacaatgatttggacgacgtgggaaaggacagt 444 Query: 361 taccaccacacctttttcgagatgct 386 |||||||| || || ||||||||||| Sbjct: 445 taccaccatactttcttcgagatgct 470
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||||||||||||| Sbjct: 3104360 ccaacgccgggatgaaccagttcaag 3104335
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||||||||||||| Sbjct: 2980285 ccaacgccgggatgaaccagttcaag 2980260
>ref|XM_790098.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl tRNA Synthetase (106.8 kD) (ars-2) (LOC590495), partial mRNA Length = 198 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaa 332 |||| ||||||||||||||| ||||| ||||||||||| Sbjct: 76 aacagccagaagtgcatccgtgccggtggcaagcacaa 113
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||||||||||||| Sbjct: 594316 ccaacgccgggatgaaccagttcaag 594291 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 363 ccaccacacctttttcgagatgctcgggaact 394 |||||| |||||||||||||||||||| |||| Sbjct: 594177 ccaccatacctttttcgagatgctcggcaact 594146
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 3479205 cgcgccggcggcaagcacaacgacct 3479180 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 127718 caccgccaccgccaccgccaccgccaccg 127746 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 127712 caccgccaccgccaccgccaccgccaccg 127740 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 127706 caccgccaccgccaccgccaccgccaccg 127734 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 127700 caccgccaccgccaccgccaccgccaccg 127728 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 127694 caccgccaccgccaccgccaccgccaccg 127722 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 127688 caccgccaccgccaccgccaccgccaccg 127716 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 127682 caccgccaccgccaccgccaccgccaccg 127710 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 127676 caccgccaccgccaccgccaccgccaccg 127704 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 127670 caccgccaccgccaccgccaccgccaccg 127698 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 127664 caccgccaccgccaccgccaccgccaccg 127692 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 3474926 caccgccaccgccaccgccaccgc 3474903
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||||||||||||| Sbjct: 2819915 ccaacgccgggatgaaccagttcaag 2819890
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 320 gcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcg 379 ||||||||||||| |||||||| || || || | || || ||||| |||||| | |||| Sbjct: 845829 gcggcaagcacaatgaccttgaagaagtaggacatgatacctaccatcacaccatgttcg 845770 Query: 380 agatgctcgggaactggtccttcggagactacttcaag 417 | ||||| || |||||||| ||||| || ||||||||| Sbjct: 845769 aaatgctgggtaactggtcgttcggtgattacttcaag 845732
>gb|AY994192.1| Cloning vector pSJS1472, complete sequence Length = 9582 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||||||||||||| Sbjct: 5270 ccaacgccgggatgaaccagttcaag 5295
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 273291 cgcgccggcggcaagcacaacgacct 273266
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 289268 cgcgccggcggcaagcacaacgacct 289243
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 194225 cgcgccggcggcaagcacaacgacct 194250
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||||||||||||| Sbjct: 2820549 ccaacgccgggatgaaccagttcaag 2820524
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 2422314 cgcgccggcggcaagcacaacgacct 2422289 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 cgccggcggcaagcacaacg 334 |||||||||||||||||||| Sbjct: 464923 cgccggcggcaagcacaacg 464904
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacgaccttgacgacgtggg 350 ||||||||||||||||||||||| || ||| ||||||| Sbjct: 1319484 cgcgccggcggcaagcacaacgatctcgacaacgtggg 1319521
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 4276034 cgcgccggcggcaagcacaacgacct 4276009
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 583684 cgcgccggcggcaagcacaacgacct 583659 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 390076 caccgccaccgccaccgccaccgc 390099
>gb|AE009520.1| Brucella melitensis 16M chromosome I, section 77 of 195 of the complete sequence Length = 10543 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 1904 cgcgccggcggcaagcacaacgacct 1929
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||||||||||||| Sbjct: 2790027 ccaacgccgggatgaaccagttcaag 2790002
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 6318206 cgcgccggcggcaagcacaacgacct 6318181 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Minus Query: 369 cacctttttcgagatgctcgggaactggtccttcggagactacttcaaggag 420 |||||| |||||||||||||| |||| || ||||| ||||| ||||||||| Sbjct: 6318150 caccttcttcgagatgctcggcaacttctcgttcggcgactatttcaaggag 6318099
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 1197675 cgcgccggcggcaagcacaacgacct 1197650
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 320 gcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcg 379 ||||||||||||| |||||||| || || || | || || ||||| |||||| | |||| Sbjct: 909185 gcggcaagcacaatgaccttgaagaagtaggacacgatacctaccatcacaccatgttcg 909126 Query: 380 agatgctcgggaactggtccttcggagactacttcaag 417 | ||||| || |||||||| ||||| || ||||||||| Sbjct: 909125 aaatgctgggtaactggtcgttcggtgattacttcaag 909088
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||||||||||||| Sbjct: 3613113 ccaacgccgggatgaaccagttcaag 3613088
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||||||||| Sbjct: 1194826 cgcgccggcggcaagcacaacgacct 1194801
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||||||||||||| Sbjct: 3545821 ccaacgccgggatgaaccagttcaag 3545796
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||||||||||||| Sbjct: 2675665 ccaacgccgggatgaaccagttcaag 2675640
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||||||||||||| Sbjct: 2982983 ccaacgccgggatgaaccagttcaag 2982958
>gb|J01581.1|ECOALAS E. coli alaS gene coding for alanyl-tRNA synthetase Length = 3010 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||||||||||||| Sbjct: 359 ccaacgccgggatgaaccagttcaag 384
>ref|NM_103905.2| Arabidopsis thaliana ALATS (ALANYL-TRNA SYNTHETASE); ATP binding / alanine-tRNA ligase/ nucleic acid binding AT1G50200 (ALATS) mRNA, complete cds Length = 3397 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Plus Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 606 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 665 Query: 418 gagggggccatcgggtatgcatgggagctcctcacccaggtctacaaattgcccactgat 477 ||| || |||| | || ||||||||| | ||| ||||||| | || |||||| Sbjct: 666 aaggaagctatcgaatgggcttgggagctcttaaccaaggtctatgggctaccgactgat 725 Query: 478 agaatttatgcaacatactttggtggtgatgagaaagctgg 518 |||| || || ||||| ||||| ||||||||||||||||| Sbjct: 726 cgaatctacgctacatattttggcggtgatgagaaagctgg 766
>ref|XM_960604.1| Neurospora crassa OR74A hypothetical protein (NCU02566.1) partial mRNA Length = 2742 Score = 50.1 bits (25), Expect = 0.008 Identities = 100/125 (80%) Strand = Plus / Plus Query: 304 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 363 |||||||| ||||| || ||||| ||||| || || ||||| || || ||||||| ||| Sbjct: 82 aagtgcattcgcgcgggtggcaaacacaatgatctcgacgatgtcggcaaggacagctac 141 Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggg 423 |||||||| || || |||||| | || |||||||| || || || ||||| ||| ||| | Sbjct: 142 caccacactttctttgagatgttgggcaactggtcttttggcgattactttaagaaggag 201 Query: 424 gccat 428 ||||| Sbjct: 202 gccat 206
>ref|XM_331764.1| Neurospora crassa OR74A hypothetical protein (NCU02566.1) partial mRNA Length = 2742 Score = 50.1 bits (25), Expect = 0.008 Identities = 100/125 (80%) Strand = Plus / Plus Query: 304 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 363 |||||||| ||||| || ||||| ||||| || || ||||| || || ||||||| ||| Sbjct: 82 aagtgcattcgcgcgggtggcaaacacaatgatctcgacgatgtcggcaaggacagctac 141 Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggg 423 |||||||| || || |||||| | || |||||||| || || || ||||| ||| ||| | Sbjct: 142 caccacactttctttgagatgttgggcaactggtcttttggcgattactttaagaaggag 201 Query: 424 gccat 428 ||||| Sbjct: 202 gccat 206
>ref|NM_001605.1| Homo sapiens alanyl-tRNA synthetase (AARS), mRNA Length = 3344 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 324 acccagaagtgcatccgggctgggggcaaacaaaatgacctggacgatgtgggcaaggat 383 Query: 358 acgtaccaccacacctttttcgagatgct 386 || || |||||||| ||||||||||| Sbjct: 384 gtctatcatcacaccttcttcgagatgct 412
>gb|BT008807.1| Arabidopsis thaliana At1g50200 gene, complete cds Length = 2868 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Plus Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 292 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 351 Query: 418 gagggggccatcgggtatgcatgggagctcctcacccaggtctacaaattgcccactgat 477 ||| || |||| | || ||||||||| | ||| ||||||| | || |||||| Sbjct: 352 aaggaagctatcgaatgggcttgggagctcttaaccaaggtctatgggctaccgactgat 411 Query: 478 agaatttatgcaacatactttggtggtgatgagaaagctgg 518 |||| || || ||||| ||||| ||||||||||||||||| Sbjct: 412 cgaatctacgctacatattttggcggtgatgagaaagctgg 452
>ref|XM_961372.1| PREDICTED: Tribolium castaneum similar to CG13391-PA, isoform A (LOC654931), mRNA Length = 2898 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 361 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 ||||||||||| |||||||| ||| | || |||||||| || || |||||||||||| Sbjct: 277 taccaccacacttttttcgaaatgatgggcaactggtcgtttggtgactacttcaag 333
>gb|AE008829.1| Salmonella typhimurium LT2, section 133 of 220 of the complete genome Length = 20371 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 190 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 234 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 4186 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 4142
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 397 tccttcggagactacttcaaggagggggccatcgggtatgcatgggagctcctcacc 453 |||||||| |||||||||||||| || |||||| ||| || |||||||| |||||| Sbjct: 63493 tccttcggcgactacttcaaggaaggcgccatcacgtacgcctgggagctgctcacc 63437
>emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 12/20 Length = 274050 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 190 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 234 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 124801 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 124757
>gb|BT008649.1| Arabidopsis thaliana clone RAFL09-78-D07 (R19577) At1g50200 mRNA, complete sequence Length = 3295 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Plus Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 446 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 505 Query: 418 gagggggccatcgggtatgcatgggagctcctcacccaggtctacaaattgcccactgat 477 ||| || |||| | || ||||||||| | ||| ||||||| | || |||||| Sbjct: 506 aaggaagctatcgaatgggcttgggagctcttaaccaaggtctatgggctaccgactgat 565 Query: 478 agaatttatgcaacatactttggtggtgatgagaaagctgg 518 |||| || || ||||| ||||| ||||||||||||||||| Sbjct: 566 cgaatctacgctacatattttggcggtgatgagaaagctgg 606
>gb|AC093491.3| Homo sapiens chromosome 16 clone RP11-410N2, complete sequence Length = 162176 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 135115 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 135174 Query: 358 acgtaccaccacacctttttcgagatgct 386 || || |||||||| ||||||||||| Sbjct: 135175 gtctatcatcacaccttcttcgagatgct 135203
>dbj|AK222824.1| Homo sapiens mRNA for alanyl-tRNA synthetase variant, clone: HEP06614 Length = 3372 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 321 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 380 Query: 358 acgtaccaccacacctttttcgagatgct 386 || || |||||||| ||||||||||| Sbjct: 381 gtctatcatcacaccttcttcgagatgct 409
>gb|BT002526.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 3172 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Plus Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 431 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 490 Query: 418 gagggggccatcgggtatgcatgggagctcctcacccaggtctacaaattgcccactgat 477 ||| || |||| | || ||||||||| | ||| ||||||| | || |||||| Sbjct: 491 aaggaagctatcgaatgggcttgggagctcttaaccaaggtctatgggctaccgactgat 550 Query: 478 agaatttatgcaacatactttggtggtgatgagaaagctgg 518 |||| || || ||||| ||||| ||||||||||||||||| Sbjct: 551 cgaatctacgctacatattttggcggtgatgagaaagctgg 591
>gb|AC009060.7|AC009060 Homo sapiens chromosome 16 clone RP11-296I10, complete sequence Length = 180596 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Minus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 178362 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 178303 Query: 358 acgtaccaccacacctttttcgagatgct 386 || || |||||||| ||||||||||| Sbjct: 178302 gtctatcatcacaccttcttcgagatgct 178274
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 190 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 234 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 2789323 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 2789279
>dbj|AK192606.1| Mus musculus cDNA, clone:Y1G0109G10, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063919, based on BLAT search Length = 226 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgacct 338 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 178 acccagaaatgcatccgagctgggggcaagcacaacgacct 218 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaa 233 ||||||||||| || |||||||||||||| Sbjct: 85 ttcgccaacgctggcatgaaccagttcaa 113
>ref|XM_308772.2| Anopheles gambiae str. PEST ENSANGP00000007670 (ENSANGG00000005781), partial mRNA Length = 2082 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 361 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||| || || ||||||||||| || |||||||| ||||| ||||| |||||| Sbjct: 250 taccaccatacattcttcgagatgctgggcaactggtcgttcggggactatttcaag 306
>ref|XM_308773.2| Anopheles gambiae str. PEST ENSANGP00000024244 (ENSANGG00000005781), partial mRNA Length = 2916 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 361 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||| || || ||||||||||| || |||||||| ||||| ||||| |||||| Sbjct: 241 taccaccatacattcttcgagatgctgggcaactggtcgttcggggactatttcaag 297
>gb|BC011451.1| Homo sapiens alanyl-tRNA synthetase, mRNA (cDNA clone MGC:9334 IMAGE:3450606), complete cds Length = 3298 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 256 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 315 Query: 358 acgtaccaccacacctttttcgagatgct 386 || || |||||||| ||||||||||| Sbjct: 316 gtctatcatcacaccttcttcgagatgct 344
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 190 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 234 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 2812658 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 2812614
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 190 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 234 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 2928314 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 2928270
>dbj|D32050.1|HUMATS Homo sapiens mRNA for alanyl-tRNA synthetase, complete cds Length = 3344 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 298 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 357 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 324 acccagaagtgcatccgggctgggggcaaacaaaatgacctggacgatgtgggcaaggat 383 Query: 358 acgtaccaccacacctttttcgagatgct 386 || || |||||||| ||||||||||| Sbjct: 384 gtctatcatcacaccttcttcgagatgct 412
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 370 acctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatc 429 ||||||||||||||| | || |||||||| || || || ||||||||||||| ||| ||| Sbjct: 1109499 acctttttcgagatgttgggtaactggtcgttgggcgattacttcaaggaggaggcaatc 1109440 Query: 430 g 430 | Sbjct: 1109439 g 1109439
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 319 ggcggcaagcacaacgaccttgacgacgtggg 350 ||||||||||||||||||||||| ||||||| Sbjct: 2398244 ggcggcaagcacaacgaccttgaaaacgtggg 2398275 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 419 ||||||||| || || || ||||| || |||| |||||||| |||||||||||||| Sbjct: 2398288 ccaccacacgttctttgaaatgctgggcaacttttccttcggcgactacttcaagga 2398344
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 203 tgttcgccaacgccgggatgaaccagttcaag 234 ||||| ||||||| |||||||||||||||||| Sbjct: 4825401 tgttcaccaacgcggggatgaaccagttcaag 4825370 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 300 ccagaagtgcatccgcgccggcggcaagcacaacgacct 338 |||||| ||| | |||||||||||||||||||| ||||| Sbjct: 4825319 ccagaaatgcgtgcgcgccggcggcaagcacaatgacct 4825281
>ref|XM_752045.1| Ustilago maydis 521 hypothetical protein (UM00991.1) partial mRNA Length = 2313 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 38 tcaccgccaccgccaccgctaccgctaccgtc 69 ||||||||||||||||||| ||||| |||||| Sbjct: 1115 tcaccgccaccgccaccgccaccgccaccgtc 1146
>ref|XM_532155.2| PREDICTED: Canis familiaris similar to alanyl-tRNA synthetase like (LOC474920), mRNA Length = 2958 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaagcc 236 |||| ||||||||| ||||||||||||||||| Sbjct: 220 ttcgtcaacgccggcatgaaccagttcaagcc 251
>ref|XM_538645.2| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A0, transcript variant 1 (LOC481524), mRNA Length = 1775 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 40 accgccaccgccaccgctaccgctaccg 67 ||||||||||| |||||||||||||||| Sbjct: 60 accgccaccgctaccgctaccgctaccg 33
>ref|XM_845859.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A0, transcript variant 2 (LOC481524), mRNA Length = 1961 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 40 accgccaccgccaccgctaccgctaccg 67 ||||||||||| |||||||||||||||| Sbjct: 60 accgccaccgctaccgctaccgctaccg 33
>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete sequence Length = 100975 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 79244 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 79303 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 472 actgatagaatttatgcaacatactttggtggtgatgagaaagctgg 518 |||||| |||| || || ||||| ||||| ||||||||||||||||| Sbjct: 79663 actgatcgaatctacgctacatattttggcggtgatgagaaagctgg 79709
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 48.1 bits (24), Expect = 0.032 Identities = 54/64 (84%) Strand = Plus / Plus Query: 367 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggcc 426 ||||||||||| || |||||||| |||| || ||||| |||||||||||| | | |||| Sbjct: 2833012 cacaccttttttgaaatgctcggcaacttctctttcggcgactacttcaagaaagaggcc 2833071 Query: 427 atcg 430 |||| Sbjct: 2833072 atcg 2833075 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 299 cccagaagtgcatccgcgccggcggcaagcacaacgacct 338 ||||||| ||| | |||||||||||||| || |||||||| Sbjct: 2832944 cccagaaatgcgtgcgcgccggcggcaaacataacgacct 2832983
>emb|BX571883.3| Zebrafish DNA sequence from clone DKEY-151P17 in linkage group 18, complete sequence Length = 253172 Score = 48.1 bits (24), Expect = 0.032 Identities = 99/124 (79%) Strand = Plus / Plus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 354 ||||| ||||||||||| || ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 243575 aacacacagaagtgcattcgtgccggtggcaaacacaatgacctcgatgatgtgggcaaa 243634 Query: 355 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 414 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 243635 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 243694 Query: 415 aagg 418 |||| Sbjct: 243695 aagg 243698
>emb|Z22673.1|ATTRNASYA A.thaliana tRNA synthetase Length = 3357 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 358 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 606 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 665
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 367 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||| |||||||||||||| |||| || || || |||||||||||| Sbjct: 2329820 cacaccttcttcgagatgctcggcaacttctcgtttggggactacttcaag 2329770
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 185 tcgacgaccccacgctcttgttcgccaacgccgggatgaaccagttc 231 |||||||||||| || ||||||| ||||||||||||| ||||||| Sbjct: 2872545 tcgacgaccccaacctgttgttcgtcaacgccgggatggtccagttc 2872499
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 185 tcgacgaccccacgctcttgttcgccaacgccgggatgaaccagttc 231 |||||||||||| || ||||||| ||||||||||||| ||||||| Sbjct: 26352 tcgacgaccccaacctgttgttcgtcaacgccgggatggtccagttc 26306
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 caccacacctttttcgagatgct 386 ||||||||||||||||||||||| Sbjct: 1411903 caccacacctttttcgagatgct 1411925
>emb|Y08363.1|TTALAS T.thermophilus alaS gene Length = 3267 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 379 gagatgctcgggaactggtccttcggagactacttcaaggagggggccatc 429 |||||||| || |||| |||||||| |||||||||||| ||| ||||||| Sbjct: 336 gagatgctgggcaacttctccttcggggactacttcaagaaggaggccatc 386
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Minus Query: 371 cctttttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatc 429 |||| ||| ||||||| || |||| |||||||| ||||||||||||||| ||||||| Sbjct: 2426009 ccttcttccagatgctgggcaacttctccttcggcgactacttcaaggagaaggccatc 2425951
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 185 tcgacgaccccacgctcttgttcgccaacgccgggatgaaccagttc 231 |||||||||||| || ||||||| ||||||||||||| ||||||| Sbjct: 103364 tcgacgaccccaacctgttgttcgtcaacgccgggatggtccagttc 103318
>gb|BC114097.1| Bos taurus cDNA clone IMAGE:8167074, partial cds Length = 2474 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 ccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||||||| |||| Sbjct: 205 ccgccaccgccaccgctaccgccaccg 179
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 34 acggtcaccgccaccgccaccgc 56 ||||||||||||||||||||||| Sbjct: 30755795 acggtcaccgccaccgccaccgc 30755817 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 30578888 caccgccaccgccaccgccaccgcaaccg 30578916 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 27054668 caccgccaccgccaccgccaccgccaccg 27054696 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 27054674 caccgccaccgccaccgccaccgc 27054697 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 acggtcaccgccaccgccaccgct 57 ||||||||||||||||| |||||| Sbjct: 20394145 acggtcaccgccaccgcaaccgct 20394122 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 ||||||||| |||||||||||||| Sbjct: 19125141 caccgccactgccaccgctaccgc 19125164 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 370 acctttttcgagatgctcgggaactggt 397 ||||| ||||||||||| |||||||||| Sbjct: 17919688 accttcttcgagatgcttgggaactggt 17919715
>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0021A09 Length = 127973 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 34 acggtcaccgccaccgccaccgc 56 ||||||||||||||||||||||| Sbjct: 45070 acggtcaccgccaccgccaccgc 45092
>ref|XM_236942.3| PREDICTED: Rattus norvegicus alanyl-tRNA synthetase like (predicted) (Aarsl_predicted), mRNA Length = 2941 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 251 |||| |||||| || |||||||||||||||||| | ||||| ||||| Sbjct: 205 ttcgtcaacgcaggcatgaaccagttcaagcccatcttcctgggcac 251
>gb|AY142830.1| Heliobacillus mobilis Alanyl-tRNA synthetase gene, partial cds Length = 2649 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 196 acgctcttgttcgccaacgccgggatgaaccagtt 230 ||||| |||||| |||||||||| ||||||||||| Sbjct: 106 acgcttttgttcaccaacgccggcatgaaccagtt 140
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 379 gagatgctcgggaactggtccttcggagactacttcaaggagggggccatc 429 |||||||| || |||| |||||||| |||||||||||| ||| ||||||| Sbjct: 1714490 gagatgctgggcaacttctccttcggggactacttcaagaaggaggccatc 1714440 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 ttcctcggcaccgcctccccggac 264 ||||||||| |||||||||||||| Sbjct: 933005 ttcctcggctccgcctccccggac 932982
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 367 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||| ||||||||||| || |||| || ||||| |||||||||||| Sbjct: 2510135 cacaccttcttcgagatgctgggcaacttttcgttcggcgactacttcaag 2510085 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 2685145 caccgccaccgccaccgccaccgc 2685168 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 41 ccgccaccgccaccgctaccgctaccgtcggc 72 |||||||||||||||| ||||| |||| |||| Sbjct: 2685141 ccgccaccgccaccgccaccgccaccgccggc 2685172
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 300 ccagaagtgcatccgcgccggcggcaagcacaacgacct 338 |||||||||| | || ||||| ||||||||||||||||| Sbjct: 5084075 ccagaagtgcgtgcgtgccggtggcaagcacaacgacct 5084037 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 1367629 caccgccaccgccaccgccaccgccaccg 1367601 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 1367623 caccgccaccgccaccgccaccgccaccg 1367595 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 203 tgttcgccaacgccgggatgaaccagttcaag 234 ||||| ||||||| || ||||||||||||||| Sbjct: 5084157 tgttcaccaacgcaggcatgaaccagttcaag 5084126 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 1367617 caccgccaccgccaccgccaccgc 1367594
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 300 ccagaagtgcatccgcgccggcggcaagcacaacgacct 338 |||||| ||| | ||||| |||||||||||||||||||| Sbjct: 1732602 ccagaaatgcctgcgcgcgggcggcaagcacaacgacct 1732564
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 379 gagatgctcgggaactggtccttcggagactacttcaaggagggggccatc 429 |||||||| || |||| |||||||| |||||||||||| ||| ||||||| Sbjct: 1404042 gagatgctgggcaacttctccttcggggactacttcaagaaggaggccatc 1403992
>ref|XM_450572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2073 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 37 gtcaccgccaccgccaccgctaccgc 62 |||||||||||||||||||| ||||| Sbjct: 495 gtcaccgccaccgccaccgccaccgc 470
>ref|NM_187011.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1728 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 ccgccaccgccaccgctaccgc 62 |||||||||||||||||||||| Sbjct: 185 ccgccaccgccaccgctaccgc 164
>gb|AF442698.1| Salix burjatica clone SB88 microsatellite sequence Length = 272 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgcta 64 |||||||||||||||||| ||||||| Sbjct: 121 caccgccaccgccaccgccaccgcta 146 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 115 caccgccaccgccaccgccaccgccaccg 143 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 accgccaccgccaccgctaccgctaccg 67 ||||||||||||||||| ||||| |||| Sbjct: 110 accgccaccgccaccgccaccgccaccg 137
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctacc 60 |||||||||||||||||||||| Sbjct: 5588906 caccgccaccgccaccgctacc 5588885 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||| ||||| |||||| Sbjct: 29042805 caccgccaccgccaccactaccactaccg 29042777 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 198558 caccgccaccgccaccgccaccgccaccg 198530 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 23093020 caccgccaccgccaccgccaccgc 23092997 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 gtcaccgccaccgccaccgc 56 |||||||||||||||||||| Sbjct: 20901178 gtcaccgccaccgccaccgc 20901197 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 11682803 caccgccaccgccaccgccaccgc 11682826 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 11682709 caccgccaccgccaccgccaccgc 11682732 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 5627343 caccgccaccgccaccgccaccgc 5627320 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 gccaccgccaccgctaccgctacc 66 |||||||||||||| ||||||||| Sbjct: 5588908 gccaccgccaccgccaccgctacc 5588885 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 198552 caccgccaccgccaccgccaccgc 198529
>gb|AC025778.8| Homo sapiens chromosome 16 clone CTD-2504F3, complete sequence Length = 208417 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 38 tcaccgccaccgccaccgctaccgctaccg 67 ||||||||||||||||||| ||||| |||| Sbjct: 184026 tcaccgccaccgccaccgccaccgccaccg 184055 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 184033 caccgccaccgccaccgccaccgc 184056
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 316 gccggcggcaagcacaacgaccttga 341 |||||||||||||| ||||||||||| Sbjct: 1440642 gccggcggcaagcataacgaccttga 1440667
>gb|AY597278.1| Pseudomonas viridiflava strain PNA3.3a pathogenicity island PAI-Region-1, partial sequence Length = 54118 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 ccgccaccgccaccgctaccgc 62 |||||||||||||||||||||| Sbjct: 45343 ccgccaccgccaccgctaccgc 45322
>gb|AY597277.1| Pseudomonas viridiflava strain LP23.1a pathogenicity island PAI-Region-1, partial sequence Length = 60908 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 ccgccaccgccaccgctaccgc 62 |||||||||||||||||||||| Sbjct: 50587 ccgccaccgccaccgctaccgc 50566
>emb|AL590408.15| Human DNA sequence from clone RP11-227F8 on chromosome 1 Contains the 5' end of a novel gene (DKFZP586L151), a novel gene, the 5' end of the gene for C-terminal PDZ domain ligand of neuronal nitric oxide synthase (CAPON) and two CpG islands, complete sequence Length = 103523 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 41 ccgccaccgccaccgctaccgctaccgtcg 70 |||||||||||||||| ||||| ||||||| Sbjct: 64917 ccgccaccgccaccgccaccgccaccgtcg 64946
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||| ||||| Sbjct: 921057 cgcgccggcggcaagcacaatgacct 921082
>emb|BX571657.1| Wolinella succinogenes, complete genome; segment 1/7 Length = 347961 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 tgcatccgcgccggcggcaagcacaacgac 336 ||||||||||| || ||||||||||||||| Sbjct: 322375 tgcatccgcgcaggaggcaagcacaacgac 322404
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 43 gccaccgccaccgctaccgctaccgtcggc 72 ||||||||||||| |||||| ||||||||| Sbjct: 49701 gccaccgccaccggtaccgcgaccgtcggc 49730
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctacc 60 |||||||||||||||||||||| Sbjct: 132438 caccgccaccgccaccgctacc 132417 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 gccaccgccaccgctaccgctacc 66 |||||||||||||| ||||||||| Sbjct: 132440 gccaccgccaccgccaccgctacc 132417
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 363 ccaccacacctttttcgagatgctcgggaa 392 ||||||||||||||| |||||||| ||||| Sbjct: 935207 ccaccacaccttttttgagatgctggggaa 935236 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||| ||||||||||||||| Sbjct: 935068 ccaacgccggcatgaaccagttcaag 935093 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 3158141 caccgccaccgccaccgccaccgc 3158164
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacgacct 338 ||||||||||||||||| |||||||| Sbjct: 47196 cgcgccggcggcaagcataacgacct 47221 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 419 |||||||||||| ||||| |||||||| || | ||||| || ||||| |||||||| Sbjct: 47246 ccaccacaccttcttcgaaatgctcggcaatttttcctttggcgactatttcaagga 47302
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 cgcgccggcggcaagcacaacgacct 338 |||||||||||||||||||| ||||| Sbjct: 3251691 cgcgccggcggcaagcacaatgacct 3251666 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ggtcaccgccaccgccaccg 55 |||||||||||||||||||| Sbjct: 1813446 ggtcaccgccaccgccaccg 1813427
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 acggtcaccgccaccgccaccg 55 |||||||||||||||||||||| Sbjct: 2222899 acggtcaccgccaccgccaccg 2222920 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 367 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 419 |||||||| ||||||||||| || |||| || ||||| || ||||||||||| Sbjct: 1194160 cacaccttcttcgagatgctgggcaacttctcgttcggcgattacttcaagga 1194108 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 318 cggcggcaagcacaacgaccttga 341 |||||| ||||||||||||||||| Sbjct: 1194209 cggcggaaagcacaacgaccttga 1194186
>ref|NM_058880.2| Caenorhabditis elegans Alanyl tRNA Synthetase family member (ars-2) (ars-2) mRNA, complete cds Length = 3472 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaacgac 336 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 245 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 286 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaagcc 236 ||||||||||| || |||||||| |||||||| Sbjct: 155 ttcgccaacgcgggaatgaaccaattcaagcc 186
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 369 cacctttttcgagatgctcgggaact 394 |||||||||||| ||||||||||||| Sbjct: 3369972 cacctttttcgaaatgctcgggaact 3369947
>gb|AC152954.1| Mus musculus 6 BAC RP23-296N5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203474 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 34 acggtcaccgccaccgccaccgctaccgctaccg 67 |||| |||||||||||||||||| ||||| |||| Sbjct: 84377 acggccaccgccaccgccaccgccaccgccaccg 84410 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 84388 caccgccaccgccaccgccaccgccaccg 84416 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 84394 caccgccaccgccaccgccaccgc 84417
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 37 gtcaccgccaccgccaccgctaccgc 62 |||||||||||||||||||| ||||| Sbjct: 9729223 gtcaccgccaccgccaccgccaccgc 9729198 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 22024926 caccgccaccgccaccgccaccgc 22024903 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 20844721 caccgccaccgccaccgccaccgc 20844744 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 3600961 caccgccaccgccaccgccaccgc 3600938
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Minus Query: 376 ttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgggt 433 ||||||||||| ||||||||| || || ||||||||||||| || |||||| |||| Sbjct: 27465279 ttcgagatgcttaggaactggtgatttggggactacttcaaggtggaggccattgggt 27465222 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 28804096 caccgccaccgccaccgccaccgc 28804119 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 12275293 caccgccaccgccaccgccaccgc 12275270
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctacc 60 |||||||||||||||||||||| Sbjct: 5588121 caccgccaccgccaccgctacc 5588100 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||| ||||| |||||| Sbjct: 29134227 caccgccaccgccaccactaccactaccg 29134199 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 198558 caccgccaccgccaccgccaccgccaccg 198530 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 23086048 caccgccaccgccaccgccaccgc 23086025 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 gtcaccgccaccgccaccgc 56 |||||||||||||||||||| Sbjct: 20894207 gtcaccgccaccgccaccgc 20894226 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 11679566 caccgccaccgccaccgccaccgc 11679589 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 11679472 caccgccaccgccaccgccaccgc 11679495 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 5626556 caccgccaccgccaccgccaccgc 5626533 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 gccaccgccaccgctaccgctacc 66 |||||||||||||| ||||||||| Sbjct: 5588123 gccaccgccaccgccaccgctacc 5588100 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 198552 caccgccaccgccaccgccaccgc 198529
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Minus Query: 364 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 417 |||||||||||||| || ||||| ||||| | |||||||| || ||||||||| Sbjct: 340612 caccacaccttttttgaaatgctggggaatttttccttcggcgattacttcaag 340559
>ref|XM_215718.3| PREDICTED: Rattus norvegicus protein kinase C-like 2 (Prkcl2), mRNA Length = 3816 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 ggccgcctgagccgcgcctgca 295 |||||||||||||||||||||| Sbjct: 186 ggccgcctgagccgcgcctgca 207
>gb|U97013.1| Caenorhabditis elegans cosmid F28H1, complete sequence Length = 23536 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaacgac 336 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 10511 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 10552
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctacc 60 |||||||||||||||||||||| Sbjct: 52605 caccgccaccgccaccgctacc 52584 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 91042 caccgccaccgccaccgccaccgc 91019 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 gccaccgccaccgctaccgctacc 66 |||||||||||||| ||||||||| Sbjct: 52607 gccaccgccaccgccaccgctacc 52584
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Minus Query: 376 ttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgggt 433 ||||||||||| ||||||||| || || ||||||||||||| || |||||| |||| Sbjct: 34837 ttcgagatgcttaggaactggtgatttggggactacttcaaggtggaggccattgggt 34780
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Minus Query: 376 ttcgagatgctcgggaactggtccttcggagactacttcaaggagggggccatcgggt 433 ||||||||||| ||||||||| || || ||||||||||||| || |||||| |||| Sbjct: 84348 ttcgagatgcttaggaactggtgatttggggactacttcaaggtggaggccattgggt 84291
>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1060_D03 Length = 102178 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 ccgccaccgccaccgctaccgc 62 |||||||||||||||||||||| Sbjct: 82103 ccgccaccgccaccgctaccgc 82124
>dbj|AP005863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0040N23 Length = 101061 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 37 gtcaccgccaccgccaccgctaccgc 62 |||||||||||||||||||| ||||| Sbjct: 1642 gtcaccgccaccgccaccgccaccgc 1617
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 37 gtcaccgccaccgccaccgctaccgc 62 |||||||||||||||||||| ||||| Sbjct: 169320 gtcaccgccaccgccaccgccaccgc 169295
>dbj|AK120259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046C24, full insert sequence Length = 1449 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctacc 60 |||||||||||||||||||||| Sbjct: 70 caccgccaccgccaccgctacc 91 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 gccaccgccaccgctaccgctacc 66 |||||||||||||| ||||||||| Sbjct: 68 gccaccgccaccgccaccgctacc 91
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 34 acggtcaccgccaccgccaccgctaccgctaccg 67 |||| |||||||||||||||||| ||||| |||| Sbjct: 2665275 acggccaccgccaccgccaccgcaaccgcaaccg 2665242
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 369 cacctttttcgagatgctcgggaact 394 |||||||||||| ||||||||||||| Sbjct: 927055 cacctttttcgaaatgctcgggaact 927080
>gb|U41660.1|CEU41660 Caenorhabditis elegans alanyl-tRNA synthetase-like protein AlaRS A mRNA, complete cds Length = 887 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 295 aacacccagaagtgcatccgcgccggcggcaagcacaacgac 336 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 240 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 281 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 205 ttcgccaacgccgggatgaaccagttcaagcc 236 ||||||||||| || |||||||| |||||||| Sbjct: 150 ttcgccaacgcgggaatgaaccaattcaagcc 181
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 cgcgccggcggcaagcacaacgacct 338 ||||| |||||||||||||||||||| Sbjct: 20725 cgcgcgggcggcaagcacaacgacct 20750
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 209 ccaacgccgggatgaaccagttcaag 234 |||||||||||||||| ||||||||| Sbjct: 2830126 ccaacgccgggatgaatcagttcaag 2830151
>gb|AC109196.12| Mus musculus chromosome 5, clone RP23-313F5, complete sequence Length = 205369 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 7770 caccgccaccgccaccgccaccgccaccg 7742 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 7764 caccgccaccgccaccgccaccgc 7741
>ref|XM_483432.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1124 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 181 caccgccaccgccaccgccaccgccaccg 153 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 175 caccgccaccgccaccgccaccgccaccg 147 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 169 caccgccaccgccaccgccaccgc 146
>gb|DQ214699.1| Taeniopygia guttata clone 0058P0002C01 translocase of inner mitochondrial membrane 22-like variant 1-like mRNA, complete sequence Length = 1115 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgct 63 |||||||||||||||||| |||||| Sbjct: 41 caccgccaccgccaccgccaccgct 65
>gb|DQ214698.1| Taeniopygia guttata clone 0058P0055H03 translocase of inner mitochondrial membrane 22-like variant 1-like mRNA, complete sequence Length = 1145 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgct 63 |||||||||||||||||| |||||| Sbjct: 85 caccgccaccgccaccgccaccgct 109
>gb|AY956840.1| Salmonella enterica subsp. enterica serovar Gallinarum strain SGB-9 virulence-associated protein spvB (spvB) gene, partial cds Length = 667 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 460 caccgccaccgccaccgccaccgccaccg 488 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 454 caccgccaccgccaccgccaccgccaccg 482 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 466 caccgccaccgccaccgccaccgc 489
>ref|NM_192499.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 302 caccgccaccgccaccgccaccgccaccg 274 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 296 caccgccaccgccaccgccaccgc 273
>gb|AE017128.1| Yersinia pestis biovar Medievalis str. 91001 section 2 of 16 of the complete genome Length = 290803 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 190 gaccccacgctcttgttcgccaacgccgggatgaaccagtt 230 ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 114314 gaccctacgctgttgtttaccaatgccgggatgaaccagtt 114354
>gb|AY650917.1| Hypochaeris radicata clone HrGGCGGT microsatellite sequence Length = 463 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 193 caccgccaccgccaccgccaccgccaccg 165 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 187 caccgccaccgccaccgccaccgccaccg 159 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 181 caccgccaccgccaccgccaccgccaccg 153 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 175 caccgccaccgccaccgccaccgc 152
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15, complete sequence Length = 142289 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 128042 caccgccaccgccaccgccaccgccaccg 128070 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 128048 caccgccaccgccaccgccaccgc 128071
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||| ||||| |||||| Sbjct: 96486 caccgccaccgccaccactaccactaccg 96514
>gb|BC101932.1| Rattus norvegicus nucleosome assembly protein 1-like 3, mRNA (cDNA clone MGC:124570 IMAGE:7938895), complete cds Length = 2824 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 224 caccgccaccgccaccgccaccgccaccg 252 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 218 caccgccaccgccaccgccaccgccaccg 246 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 212 caccgccaccgccaccgccaccgccaccg 240 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 206 caccgccaccgccaccgccaccgccaccg 234 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 230 caccgccaccgccaccgccaccgc 253
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 42.1 bits (21), Expect = 2.0 Identities = 60/73 (82%) Strand = Plus / Plus Query: 380 agatgctcgggaactggtccttcggagactacttcaaggagggggccatcgggtatgcat 439 ||||||| ||||| | |||||||| |||||||||||| | | |||||| ||| |||| Sbjct: 1284334 agatgctggggaatttctccttcggtgactacttcaagaacgaggccattcagtacgcat 1284393 Query: 440 gggagctcctcac 452 |||||||| |||| Sbjct: 1284394 gggagctcgtcac 1284406
>gb|AY973970.1| Leishmania major excreted/secreted protein 37 mRNA, complete cds Length = 1836 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 gtcaccgccaccgccaccgct 57 ||||||||||||||||||||| Sbjct: 1757 gtcaccgccaccgccaccgct 1737
>gb|DQ472188.1| Trypanosoma cruzi strain CL Brener formin 120 kDa gene, complete cds Length = 3294 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 1565 caccgccaccgccaccgccaccgccaccg 1593
>gb|BC027927.1| Homo sapiens cDNA clone IMAGE:5200165, partial cds Length = 2447 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 191 caccgccaccgccaccgccaccgccaccg 163 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 185 caccgccaccgccaccgccaccgc 162
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 190 gaccccacgctcttgttcgccaacgccgggatgaaccagtt 230 ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 992337 gaccctacgctgttgtttaccaatgccgggatgaaccagtt 992377
>ref|NM_133402.2| Rattus norvegicus nucleosome assembly protein 1-like 3 (Nap1l3), mRNA Length = 2824 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 224 caccgccaccgccaccgccaccgccaccg 252 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 218 caccgccaccgccaccgccaccgccaccg 246 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 212 caccgccaccgccaccgccaccgccaccg 240 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 206 caccgccaccgccaccgccaccgccaccg 234 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 230 caccgccaccgccaccgccaccgc 253
>emb|AM039951.1| Xanthomonas campestris pv. vesicatoria plasmid pXCV183, complete genome Length = 182572 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 12875 caccgccaccgccaccgccaccgccaccg 12847
>ref|XM_381693.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01517.1) partial mRNA Length = 525 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 caccgccaccgccaccgctaccgct 63 |||||||||||||||||| |||||| Sbjct: 178 caccgccaccgccaccgccaccgct 154
>gb|AC123056.4| Mus musculus BAC clone RP23-182H4 from chromosome 13, complete sequence Length = 183076 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 62117 caccgccaccgccaccgccaccgccaccg 62145 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 62111 caccgccaccgccaccgccaccgccaccg 62139 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 62105 caccgccaccgccaccgccaccgccaccg 62133 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgctaccg 67 |||||||||||||||||| ||||| |||| Sbjct: 62099 caccgccaccgccaccgccaccgccaccg 62127 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 caccgccaccgccaccgctaccgc 62 |||||||||||||||||| ||||| Sbjct: 62123 caccgccaccgccaccgccaccgc 62146 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,877,485 Number of Sequences: 3902068 Number of extensions: 3877485 Number of successful extensions: 90499 Number of sequences better than 10.0: 542 Number of HSP's better than 10.0 without gapping: 581 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 79378 Number of HSP's gapped (non-prelim): 10751 length of query: 582 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 559 effective length of database: 17,143,297,704 effective search space: 9583103416536 effective search space used: 9583103416536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
