ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62j06 |
|---|---|
| Clone Library Name | barley_pub |
>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)| (Manganese(II) purple acid phosphatase) Length = 464 Score = 338 bits (867), Expect = 8e-93 Identities = 156/209 (74%), Positives = 171/209 (81%), Gaps = 2/209 (0%) Frame = +2 Query: 17 KYYYAMGFGHTVRTFSFTTLPKPGPDVPFKFGLIGDLGQTFDSNSTLSHYEANG--GDAV 190 KYYY +G G+T R F F T P+ GPDVP+ FGLIGDLGQ+FDSN TLSHYE N G V Sbjct: 127 KYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTV 186 Query: 191 LFVGDLSYADAYPLHDNRRWDSWARFVERSVAYQPWIWTAGNHELDYAPEIGETVPFKPF 370 LFVGDLSYAD YP HDN RWDSW RF ERSVAYQPWIWTAGNHE +APEIGETVPFKP+ Sbjct: 187 LFVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGETVPFKPY 246 Query: 371 THRYRTPYLAAGSTEPLWYSVKIASAHIIVLSSYSSYGKYTPQWTWLSDELGRVDRRATP 550 THRY PY A+ ST P WYS+K ASAHIIVL+SYS+YGKYTPQ+ WL EL +V+R TP Sbjct: 247 THRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETP 306 Query: 551 WLIVLMHSPWYNSNNYHYMEGETMRVQFE 637 WLIVLMHSPWYNS NYHYMEGETMRV +E Sbjct: 307 WLIVLMHSPWYNSYNYHYMEGETMRVMYE 335
>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC| 3.1.3.2) (PAP) Length = 469 Score = 314 bits (805), Expect = 1e-85 Identities = 147/210 (70%), Positives = 168/210 (80%), Gaps = 2/210 (0%) Frame = +2 Query: 17 KYYYAMGFGHTVRTFSFTTLPKPGPDVPFKFGLIGDLGQTFDSNSTLSHYEANGG--DAV 190 KYYY +G G R F F PK GPDVP+ FGLIGDLGQT+DSNSTLSHYE N G AV Sbjct: 133 KYYYEIGSGKWSRRFWFFIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHYEMNPGKGQAV 192 Query: 191 LFVGDLSYADAYPLHDNRRWDSWARFVERSVAYQPWIWTAGNHELDYAPEIGETVPFKPF 370 LFVGDLSYAD YP HDN RWD+W RFVERSVAYQPWIWTAGNHE+D+ P+IGE PFKPF Sbjct: 193 LFVGDLSYADRYPNHDNNRWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFKPF 252 Query: 371 THRYRTPYLAAGSTEPLWYSVKIASAHIIVLSSYSSYGKYTPQWTWLSDELGRVDRRATP 550 +RY TP+ A+GS PLWYS+K ASA+IIV+S YSSYG YTPQ+ WL EL V+R TP Sbjct: 253 MNRYHTPHKASGSISPLWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKELQGVNRTETP 312 Query: 551 WLIVLMHSPWYNSNNYHYMEGETMRVQFEQ 640 WLIVL+HSP+Y+S +HYMEGET+RV +EQ Sbjct: 313 WLIVLVHSPFYSSYVHHYMEGETLRVMYEQ 342
>PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2)| (PAP) Length = 432 Score = 311 bits (797), Expect = 1e-84 Identities = 144/212 (67%), Positives = 168/212 (79%), Gaps = 2/212 (0%) Frame = +2 Query: 8 HGVKYYYAMGFGHTVRTFSFTTLPKPGPDVPFKFGLIGDLGQTFDSNSTLSHYEANG--G 181 + KYYY +G +T R FSF T P+ G DVP+ FGLIGDLGQ+FDSN+TLSHYE + G Sbjct: 97 YNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKG 156 Query: 182 DAVLFVGDLSYADAYPLHDNRRWDSWARFVERSVAYQPWIWTAGNHELDYAPEIGETVPF 361 VLFVGDLSYAD YP HDN RWD+W RF ERSVAYQPWIWTAGNHE+++APEI ET PF Sbjct: 157 QTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPF 216 Query: 362 KPFTHRYRTPYLAAGSTEPLWYSVKIASAHIIVLSSYSSYGKYTPQWTWLSDELGRVDRR 541 KPF++RY PY A+ ST P WYS+K ASAHIIVLSS+ +YG+ TPQ+TWL EL +V R Sbjct: 217 KPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSHIAYGRGTPQYTWLKKELRKVKRS 276 Query: 542 ATPWLIVLMHSPWYNSNNYHYMEGETMRVQFE 637 TPWLIVLMHSP YNS N+H+MEGE MR +FE Sbjct: 277 ETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFE 308
>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)| (Fragments) Length = 368 Score = 68.2 bits (165), Expect = 2e-11 Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 20/207 (9%) Frame = +2 Query: 53 RTFSFTTLPKPGPDVPFKFGLIGDLGQTF-DSNSTLSHYEA-------------NGGDAV 190 + ++F P PG + + + GD+G+ D ++ ++Y+ + D V Sbjct: 27 KPYTFRAPPTPGQNSLQRIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIEDLDNYDIV 86 Query: 191 LFVGDLSYADAYPLHDNRRWDSWARFVERSVAYQPWIWTAGNHELDYAPEIGETVPFKPF 370 +GD+ YA+ Y +WD + V A +P++ +GNHE D+ P G K Sbjct: 87 FHIGDMPYANGYL----SQWDQFTAQVAPISAKKPYMVASGNHERDW-PNTGGFFDVKDS 141 Query: 371 THRYRTP-----YLAAGSTEPLWYSVKIASAHIIVLSSYSSYGKYTPQWTWLSDELGRVD 535 P Y A + WY V V S + + TPQ+ ++ + L VD Sbjct: 142 GGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTVD 201 Query: 536 RRATPWLIVLMHSP-WYNSNNYHYMEG 613 R+ PWLI H Y+SN+++ +G Sbjct: 202 RKHQPWLIFTAHRVLGYSSNSWYADQG 228
>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid| phosphatase) (APase6) Length = 614 Score = 53.5 bits (127), Expect = 5e-07 Identities = 41/185 (22%), Positives = 57/185 (30%), Gaps = 71/185 (38%) Frame = +2 Query: 248 WDSWARFVERSVAYQPWIWTAGNHELDYAPEIGE---------------TVP-------- 358 WD W +++ P++ GNHE A G T P Sbjct: 286 WDLWQQWLNNVTLKIPYMVLPGNHEASCAEFDGPHNILTAYLNDDIANGTAPTDNLTYYS 345 Query: 359 -------FKPFTHRYRTPYLAAGSTEPLWYSVKIASAHIIVLSSYSSYG----------- 484 F + HR+R P G WYS AH + + + + Sbjct: 346 CPPSQRNFTAYQHRFRMPGPETGGVGNFWYSFDYGLAHFVSIDGETDFANSPEWNFAEDV 405 Query: 485 ------------------------------KYTPQWTWLSDELGRVDRRATPWLIVLMHS 574 K QW WL +L +VDR TPW+IV+ H Sbjct: 406 TGNETLPSESETFITDSGPFGNVNGSVHETKSYEQWHWLQQDLAKVDRSKTPWVIVMSHR 465 Query: 575 PWYNS 589 P Y+S Sbjct: 466 PMYSS 470
>Y2577_MYCTU (Q50644) Hypothetical protein Rv2577/MT2654| Length = 529 Score = 46.6 bits (109), Expect = 6e-05 Identities = 42/142 (29%), Positives = 56/142 (39%), Gaps = 15/142 (10%) Frame = +2 Query: 191 LFVGDLSYADAYPLHDN-RRWDSWARFVERSVAYQPWIWTAGNHELDYAPEIGE-TVPFK 364 L GDL YA+ D R W W RS Y+PW+ AGNHE E+G + + Sbjct: 213 LINGDLCYANL--AQDRIRTWSDWFDNNTRSARYRPWMPAAGNHE----NEVGNGPIGYD 266 Query: 365 PFTHRYRTPYLAAG-STEPLWYSVKIASAHIIVL-----------SSYSSYGKYTPQWTW 508 + + P + LWYS S +I L +SY Q W Sbjct: 267 AYQTYFAVPDSGSSPQLRGLWYSFTAGSVRVISLHNDDVCYQDGGNSYVRGYSGGEQRRW 326 Query: 509 LSDELGRVDRRA-TPWLIVLMH 571 L EL R + W++V MH Sbjct: 327 LQAELANARRDSEIDWVVVCMH 348
>PPA1_ASPNG (P20584) Phosphate-repressible acid phosphatase precursor (EC| 3.1.3.2) (Acid phosphatase PII) Length = 436 Score = 34.7 bits (78), Expect = 0.25 Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 5/91 (5%) Frame = +2 Query: 335 PEIGETVP-----FKPFTHRYRTPYLAAGSTEPLWYSVKIASAHIIVLSSYSSYGKYTPQ 499 P+ GE V F + H +R P G WYS AH + + + + +P+ Sbjct: 215 PDQGEVVANRRRNFTAYQHPFRMPGPETGGVGNFWYSFDYGLAHFVSIDGETDFAN-SPE 273 Query: 500 WTWLSDELGRVDRRATPWLIVLMHSPWYNSN 592 W + D G + + P+ N N Sbjct: 274 WNFAEDVTGNETLPSEAETFITDSGPFGNVN 304
>Y269_MYCPN (P75506) UPF0144 protein MG130 homolog (A65_orf493)| Length = 493 Score = 32.0 bits (71), Expect = 1.6 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +2 Query: 89 PDVPFKFGLIGDLGQTFDSNSTLSH--YEANGGDAVLFVGDLSYADAYPLHDNRRWDS 256 PDV K GL D+G+ D N +H A GD F D+ Y A H N+ D+ Sbjct: 322 PDVALKCGLYHDIGKADDENGKKNHTVTGAKIGDEFYFENDVKYTIAN--HHNKNVDN 377
>PPA5_HUMAN (P13686) Tartrate-resistant acid phosphatase type 5 precursor (EC| 3.1.3.2) (TR-AP) (Tartrate-resistant acid ATPase) (TrATPase) (Acid phosphatase 5, tartrate resistant) Length = 325 Score = 31.6 bits (70), Expect = 2.1 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 2/74 (2%) Frame = +2 Query: 176 GGDAVLFVGDLSY-ADAYPLHDNRRWDSWAR-FVERSVAYQPWIWTAGNHELDYAPEIGE 349 G D +L +GD Y ++D R +++ F +RS+ PW AGNH D+ + Sbjct: 62 GADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNH--DHLGNVSA 119 Query: 350 TVPFKPFTHRYRTP 391 + + + R+ P Sbjct: 120 QIAYSKISKRWNFP 133
>GLGB1_STRAW (Q82JF0) 1,4-alpha-glucan branching enzyme 1 (EC 2.4.1.18)| (Glycogen branching enzyme 1) (BE 1) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 1) Length = 838 Score = 30.0 bits (66), Expect = 6.0 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Frame = +1 Query: 1 LKXWRQVLLRDGVRPHGADLLLHHP----PQARPRRPLQVR 111 + W + L DG R G+D+ HP PQ R RP +R Sbjct: 784 IPAWHETLNTDGARYGGSDVTNPHPVKPEPQGRHGRPASIR 824
>EGF_HUMAN (P01133) Pro-epidermal growth factor precursor (EGF) [Contains:| Epidermal growth factor (Urogastrone)] Length = 1207 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = -1 Query: 132 WPRSPMSPNLKGTSGPGLGRVVKEKVRTVWPNPIA**YLTPXL 4 W + ++P ++ +S GLGR+V +WP+ I +LT L Sbjct: 614 WTDTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKL 656
>TBX4_MOUSE (P70325) T-box transcription factor TBX4 (T-box protein 4)| Length = 552 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 7/47 (14%) Frame = +2 Query: 299 IWTAGNHELDYAPEIGETVPFKPFTHRY-------RTPYLAAGSTEP 418 +WT+ + Y+ + ETVP++PF + R P +AA S +P Sbjct: 426 MWTSVSPYTSYSVQTMETVPYQPFPAHFTATTVMPRLPTIAAQSAQP 472
>PPOCM_SPIOL (Q94IG7) Protoporphyrinogen oxidase, chloroplast/mitochondrial| precursor (EC 1.3.3.4) (Protox II) (SO-POX2) Length = 531 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = +2 Query: 194 FVGDLSYADAYPLHDNRRWDSWARFVERSVAYQPWIWTAGNHE 322 FV ++ A+PL+ R +DS R +E+ P ++ AGNH+ Sbjct: 457 FVNHFYWSKAFPLY-GRNYDSVLRAIEKMERDLPGLFYAGNHK 498
>TBX4_HUMAN (P57082) T-box transcription factor TBX4 (T-box protein 4)| Length = 545 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 7/47 (14%) Frame = +2 Query: 299 IWTAGNHELDYAPEIGETVPFKPFTHRY-------RTPYLAAGSTEP 418 +WT+ + Y+ + ETVP++PF + R P L+A S++P Sbjct: 419 MWTSVSPYTSYSVQTMETVPYQPFPTHFTATTMMPRLPTLSAQSSQP 465
>SRG1_CAEEL (P46570) Serpentine receptor class gamma-1 (Protein srg-1)| Length = 288 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = +2 Query: 188 VLFVGDLSYADAYPLHDNRRWDSWARFVERSVAYQP--WIWT 307 +LFV + + +PL + W W + + ++A P WIWT Sbjct: 124 ILFVANRASCVLWPLSYSLFWKKWLKSILTTMAISPCLWIWT 165
>YHK9_SCHPO (O94428) Hypothetical protein C660.09 in chromosome II| Length = 115 Score = 29.6 bits (65), Expect = 7.9 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +2 Query: 59 FSFTTLPKPGPDVPFKFGLIGDLGQTFDSNSTLSHYEA 172 F + KP P +PF IGDL Q S +SH+++ Sbjct: 8 FEDRKVSKPSPVLPFDVSNIGDLSQGVHSPLGISHFDS 45 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,372,953 Number of Sequences: 219361 Number of extensions: 1260512 Number of successful extensions: 4079 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3984 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4072 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
