ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62j06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK058368.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-G03, full insert sequence Length = 1475 Score = 698 bits (352), Expect = 0.0 Identities = 558/626 (89%), Gaps = 3/626 (0%) Strand = Plus / Plus Query: 16 caagtactactacgcgatggggttcggccacacggtgcggaccttctccttcaccaccct 75 ||||||||||||||| ||||| |||| ||||| || || ||||||||||||||||| | Sbjct: 443 caagtactactacgccatgggcttcgatcacaccgtccgtaccttctccttcaccacgcc 502 Query: 76 ccccaagcccggccccgacgtccccttcaagttcgggctcatcggtgacctgggccagac 135 |||||||||| ||||||| ||||||||||||||| |||||||||||||| || ||||| Sbjct: 503 gcccaagcccgctcccgacgcccccttcaagttcggcctcatcggtgacctcgggcagac 562 Query: 136 gttcgactccaacagcacgctgtcgcactacgaggccaacggcggcgacgcggtgctctt 195 ||||||||| |||||||||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 563 gttcgactcgaacagcacgctggcgcactacgaggccaacggcggcgacgccgtcctctt 622 Query: 196 cgtgggcgacctctcctacgccgacgcctacccgctgcacgacaaccggcggtgggacag 255 ||| ||||||||||||||||||||| |||||| || ||||||||| || ||||||| Sbjct: 623 cgtcggcgacctctcctacgccgacaactaccctctccacgacaacaaccgctgggacac 682 Query: 256 ctgggcgcgcttcgtggagcgcagcgtggcgtaccagccgtggatctggacggccggcaa 315 |||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 683 gtgggcgcgcttcgtcgagcgcagcgtcgcgtaccagccatggatctggaccgccggcaa 742 Query: 316 ccacgagctggactacgcgccggagatcggcgagacggtgcccttcaagcccttcaccca 375 ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| Sbjct: 743 ccacgagctggactacgcgccggagctgggcgagacggtccccttcaagcccttcaccca 802 Query: 376 ccgctaccgcacgccgtacctcgccgccggcagcacggagccgctctggtactcggtgaa 435 ||| |||| |||||||||| |||||||||||||||||||||| |||||||||| || || Sbjct: 803 ccggtacccgacgccgtaccgcgccgccggcagcacggagccgttctggtactccgtcaa 862 Query: 436 gatcgcctccgcccacatcatcgtgctctcctcctactcctcctacggcaagtacacgcc 495 |||||||||||| ||| |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 863 gatcgcctccgcgcacgtcatcgtgctggcctcctactccgcctacggcaagtacacgcc 922 Query: 496 gcagtggacgtggctgagcgacgagctgg---gccgcgtcgaccgcagggccacgccgtg 552 ||||||||| |||||| || ||||| | |||||||||||||| | ||| ||||| Sbjct: 923 gcagtggacatggctgcaggaggagctcgccacccgcgtcgaccgcaagctcaccccgtg 982 Query: 553 gctcatcgtgctcatgcactcgccctggtacaacagcaacaactaccattacatggaggg 612 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 983 gctcatcgtgctcatgcactcgccgtggtacaacagcaacaactaccactacatggaggg 1042 Query: 613 ggagacgatgcgggtgcagttcgagc 638 |||||||||||| || |||||||||| Sbjct: 1043 ggagacgatgcgcgtccagttcgagc 1068
>dbj|AK066273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061L15, full insert sequence Length = 1853 Score = 690 bits (348), Expect = 0.0 Identities = 557/626 (88%), Gaps = 3/626 (0%) Strand = Plus / Plus Query: 16 caagtactactacgcgatggggttcggccacacggtgcggaccttctccttcaccaccct 75 ||||||||||||||| ||||| |||| ||||| || || ||||||||||||||||| | Sbjct: 444 caagtactactacgccatgggcttcgatcacaccgtccgtaccttctccttcaccacgcc 503 Query: 76 ccccaagcccggccccgacgtccccttcaagttcgggctcatcggtgacctgggccagac 135 |||||||||| ||||||| ||||||||||||||| |||||||||||||| || ||||| Sbjct: 504 gcccaagcccgctcccgacgcccccttcaagttcggcctcatcggtgacctcgggcagac 563 Query: 136 gttcgactccaacagcacgctgtcgcactacgaggccaacggcggcgacgcggtgctctt 195 ||||| ||| |||||||||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 564 gttcgtctcgaacagcacgctggcgcactacgaggccaacggcggcgacgccgtcctctt 623 Query: 196 cgtgggcgacctctcctacgccgacgcctacccgctgcacgacaaccggcggtgggacag 255 ||| ||||||||||||||||||||| |||||| || ||||||||| || ||||||| Sbjct: 624 cgtcggcgacctctcctacgccgacaactaccctctccacgacaacaaccgctgggacac 683 Query: 256 ctgggcgcgcttcgtggagcgcagcgtggcgtaccagccgtggatctggacggccggcaa 315 |||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 684 gtgggcgcgcttcgtcgagcgcagcgtcgcgtaccagccatggatctggaccgccggcaa 743 Query: 316 ccacgagctggactacgcgccggagatcggcgagacggtgcccttcaagcccttcaccca 375 ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| Sbjct: 744 ccacgagctggactacgcgccggagctgggcgagacggtccccttcaagcccttcaccca 803 Query: 376 ccgctaccgcacgccgtacctcgccgccggcagcacggagccgctctggtactcggtgaa 435 ||| |||| |||||||||| |||||||||||||||||||||| |||||||||| || || Sbjct: 804 ccggtacccgacgccgtaccgcgccgccggcagcacggagccgttctggtactccgtcaa 863 Query: 436 gatcgcctccgcccacatcatcgtgctctcctcctactcctcctacggcaagtacacgcc 495 |||||||||||| ||| |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 864 gatcgcctccgcgcacgtcatcgtgctggcctcctactccgcctacggcaagtacacgcc 923 Query: 496 gcagtggacgtggctgagcgacgagctgg---gccgcgtcgaccgcagggccacgccgtg 552 ||||||||| |||||| || ||||| | |||||||||||||| | ||| ||||| Sbjct: 924 gcagtggacatggctgcaggaggagctcgccacccgcgtcgaccgcaagctcaccccgtg 983 Query: 553 gctcatcgtgctcatgcactcgccctggtacaacagcaacaactaccattacatggaggg 612 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 984 gctcatcgtgctcatgcactcgccgtggtacaacagcaacaactaccactacatggaggg 1043 Query: 613 ggagacgatgcgggtgcagttcgagc 638 |||||||||||| || |||||||||| Sbjct: 1044 ggagacgatgcgcgtccagttcgagc 1069
>dbj|AB066561.1| Oryza sativa ossap2 mRNA for secretory acid phosphatase precursor, complete cds Length = 1836 Score = 670 bits (338), Expect = 0.0 Identities = 555/626 (88%), Gaps = 6/626 (0%) Strand = Plus / Plus Query: 16 caagtactactacgcgatggggttcggccacacggtgcggaccttctccttcaccaccct 75 ||||||||||||||| ||||| |||| ||||| || || ||||||||||||||||| | Sbjct: 426 caagtactactacgccatgggcttcgatcacaccgtccgtaccttctccttcaccacgcc 485 Query: 76 ccccaagcccggccccgacgtccccttcaagttcgggctcatcggtgacctgggccagac 135 |||||||||| ||||||| ||||||||||||||| |||||||||||||| || ||||| Sbjct: 486 gcccaagcccgctcccgacgcccccttcaagttcggcctcatcggtgacctcgggcagac 545 Query: 136 gttcgactccaacagcacgctgtcgcactacgaggccaacggcggcgacgcggtgctctt 195 ||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 546 gttcgactcgaacagcacgctggcgcactacgaggccaacggcggcgacgcgtccctctt 605 Query: 196 cgtgggcgacctctcctacgccgacgcctacccgctgcacgacaaccggcggtgggacag 255 ||| ||||||||||||||||||||| |||||| || ||||||||| || ||||||| Sbjct: 606 cgtcggcgacctctcctacgccgacaactaccctctccacgacaacaaccgctgggacac 665 Query: 256 ctgggcgcgcttcgtggagcgcagcgtggcgtaccagccgtggatctggacggccggcaa 315 |||||||||||||| |||||||||| |||||||||| ||||||||||| |||||||| Sbjct: 666 gtgggcgcgcttcgtcgagcgcagcg---cgtaccagccatggatctggaccgccggcaa 722 Query: 316 ccacgagctggactacgcgccggagatcggcgagacggtgcccttcaagcccttcaccca 375 ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| Sbjct: 723 ccacgagctggactacgcgccggagctgggcgagacggtccccttcaagcccttcaccca 782 Query: 376 ccgctaccgcacgccgtacctcgccgccggcagcacggagccgctctggtactcggtgaa 435 ||| |||| |||||||||| |||||||||||||||||||||| |||||||||| || || Sbjct: 783 ccggtacccgacgccgtaccgcgccgccggcagcacggagccgttctggtactccgtcaa 842 Query: 436 gatcgcctccgcccacatcatcgtgctctcctcctactcctcctacggcaagtacacgcc 495 |||||||||||| ||| |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 843 gatcgcctccgcgcacgtcatcgtgctggcctcctactccgcctacggcaagtacacgcc 902 Query: 496 gcagtggacgtggctgagcgacgagctgg---gccgcgtcgaccgcagggccacgccgtg 552 ||||||||| |||||| || ||||| | |||||||||||||| | ||| ||||| Sbjct: 903 gcagtggacatggctgcaggaggagctcgccacccgcgtcgaccgcaagctcaccccgtg 962 Query: 553 gctcatcgtgctcatgcactcgccctggtacaacagcaacaactaccattacatggaggg 612 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 963 gctcatcgtgctcatgcactcgccgtggtacaacagcaacaactaccactacatggaggg 1022 Query: 613 ggagacgatgcgggtgcagttcgagc 638 |||||||||||| || |||||||||| Sbjct: 1023 ggagacgatgcgcgtccagttcgagc 1048
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 605 bits (305), Expect = e-170 Identities = 469/523 (89%), Gaps = 3/523 (0%) Strand = Plus / Minus Query: 119 ggtgacctgggccagacgttcgactccaacagcacgctgtcgcactacgaggccaacggc 178 |||||||| || |||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 27341333 ggtgacctcgggcagacgttcgactcgaacagcacgctggcgcactacgaggccaacggc 27341274 Query: 179 ggcgacgcggtgctcttcgtgggcgacctctcctacgccgacgcctacccgctgcacgac 238 |||||||| || |||||||| ||||||||||||||||||||| |||||| || |||||| Sbjct: 27341273 ggcgacgccgtcctcttcgtcggcgacctctcctacgccgacaactaccctctccacgac 27341214 Query: 239 aaccggcggtgggacagctgggcgcgcttcgtggagcgcagcgtggcgtaccagccgtgg 298 ||| || ||||||| |||||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 27341213 aacaaccgctgggacacgtgggcgcgcttcgtcgagcgcagcgtcgcgtaccagccatgg 27341154 Query: 299 atctggacggccggcaaccacgagctggactacgcgccggagatcggcgagacggtgccc 358 |||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| ||| Sbjct: 27341153 atctggaccgccggcaaccacgagctggactacgcgccggagctgggcgagacggtcccc 27341094 Query: 359 ttcaagcccttcacccaccgctaccgcacgccgtacctcgccgccggcagcacggagccg 418 |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||| Sbjct: 27341093 ttcaagcccttcacccaccggtacccgacgccgtaccgcgccgccggcagcacggagccg 27341034 Query: 419 ctctggtactcggtgaagatcgcctccgcccacatcatcgtgctctcctcctactcctcc 478 |||||||||| || |||||||||||||| ||| |||||||||| ||||||||||| || Sbjct: 27341033 ttctggtactccgtcaagatcgcctccgcgcacgtcatcgtgctggcctcctactccgcc 27340974 Query: 479 tacggcaagtacacgccgcagtggacgtggctgagcgacgagctgg---gccgcgtcgac 535 |||||||||||||||||||||||||| |||||| || ||||| | |||||||||| Sbjct: 27340973 tacggcaagtacacgccgcagtggacatggctgcaggaggagctcgccacccgcgtcgac 27340914 Query: 536 cgcagggccacgccgtggctcatcgtgctcatgcactcgccctggtacaacagcaacaac 595 |||| | ||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 27340913 cgcaagctcaccccgtggctcatcgtgctcatgcactcgccgtggtacaacagcaacaac 27340854 Query: 596 taccattacatggagggggagacgatgcgggtgcagttcgagc 638 ||||| ||||||||||||||||||||||| || |||||||||| Sbjct: 27340853 taccactacatggagggggagacgatgcgcgtccagttcgagc 27340811 Score = 309 bits (156), Expect = 6e-81 Identities = 428/516 (82%), Gaps = 2/516 (0%) Strand = Plus / Minus Query: 110 gggctcatcggtgacctgggccagacgttcgactccaacagcacgctgtcgcactacgag 169 ||||||||||| ||| | || ||||| |||||||||||| ||| || | ||||||||| Sbjct: 27347249 gggctcatcggcgacatcgggcagaccttcgactccaacgccaccctcacccactacgag 27347190 Query: 170 gccaacggcggcgacgcggtgctcttcgtgggcgacctctcctacgccgacgcctacccg 229 ||| |||||||||||| || |||||| ||||||||||||||||||||||| |||||| Sbjct: 27347189 gcctccggcggcgacgccgtcctcttcatgggcgacctctcctacgccgacaagtacccg 27347130 Query: 230 ctgcacgacaaccggcggtgggacagctgggcgcgcttcgtggagcgcagcgtggcgtac 289 || ||||||||| |||||||||| |||| |||||| ||||||||||||||||||| Sbjct: 27347129 ctccacgacaacaaccggtgggacacgtggggccgcttctcggagcgcagcgtggcgtac 27347070 Query: 290 cagccgtggatctggacggccggcaaccacgagctggactacgcgccggagatcggcgag 349 ||||| ||||||||| ||| |||||||||||| | |||||||| |||||| | || ||| Sbjct: 27347069 cagccatggatctgggtggctggcaaccacgagatcgactacgccccggagctgggggag 27347010 Query: 350 acggtgcccttcaagcccttcacccaccgctaccgcacgccgtacctcgcc-gccggcag 408 ||| ||| ||||||||||||||||||||||||| |||||| |||||||| || | | Sbjct: 27347009 acgaagccgttcaagcccttcacccaccgctacccgacgccgcacctcgccagcgcgtcg 27346950 Query: 409 cacggagccgctctggtactcggtgaagatcgcctccgcccacatcatcgtgctctcctc 468 | |||||||| |||||||||||||||| | || || | |||||||||||||||||||| Sbjct: 27346949 c-cggagccgtactggtactcggtgaagctggcgtcggtgcacatcatcgtgctctcctc 27346891 Query: 469 ctactcctcctacggcaagtacacgccgcagtggacgtggctgagcgacgagctgggccg 528 ||||||| | | || |||||||||||||||||||| ||||||| | |||||||| || Sbjct: 27346890 ctactccgcgttcgccaagtacacgccgcagtggaagtggctggaggcggagctggggcg 27346831 Query: 529 cgtcgaccgcagggccacgccgtggctcatcgtgctcatgcactcgccctggtacaacag 588 || |||| || | ||||||||||| ||| || ||||||||| ||||||||||| Sbjct: 27346830 ggttaaccggagcgagacgccgtggctgatcatggcgtcgcactcgccgtggtacaacag 27346771 Query: 589 caacaactaccattacatggagggggagacgatgcg 624 |||||||| ||| ||||||||||||||| ||||||| Sbjct: 27346770 caacaacttccactacatggagggggagtcgatgcg 27346735 Score = 281 bits (142), Expect = 1e-72 Identities = 472/582 (81%) Strand = Plus / Minus Query: 57 ccttctccttcaccaccctccccaagcccggccccgacgtccccttcaagttcgggctca 116 ||||||||||||| || | ||||||||||| |||||||| || | |||||||||||||| Sbjct: 27338387 ccttctccttcacgacgccgcccaagcccgggcccgacgtgccgtacaagttcgggctca 27338328 Query: 117 tcggtgacctgggccagacgttcgactccaacagcacgctgtcgcactacgaggccaacg 176 |||| ||||| || ||||||||| |||||||| ||||||| ||||||||||| || Sbjct: 27338327 tcggcgacctcgggcagacgttccactccaacgacacgctgagccactacgaggcgtgcg 27338268 Query: 177 gcggcgacgcggtgctcttcgtgggcgacctctcctacgccgacgcctacccgctgcacg 236 |||||||||||||||| ||| | |||||||| || ||||| ||| | ||||| ||||| Sbjct: 27338267 gcggcgacgcggtgctgttcatcggcgacctgtcgtacgcggacaaccacccggggcacg 27338208 Query: 237 acaaccggcggtgggacagctgggcgcgcttcgtggagcgcagcgtggcgtaccagccgt 296 ||||| |||||||||| |||||||| ||||||||||| ||||||||||||||||||| Sbjct: 27338207 acaacaaccggtgggacacgtgggcgcggttcgtggagcggagcgtggcgtaccagccgt 27338148 Query: 297 ggatctggacggccggcaaccacgagctggactacgcgccggagatcggcgagacggtgc 356 ||||||||||| | || |||||||||||||||| |||||||||| | || |||||| || Sbjct: 27338147 ggatctggacgacggggaaccacgagctggacttcgcgccggagctgggggagacgacgc 27338088 Query: 357 ccttcaagcccttcacccaccgctaccgcacgccgtacctcgccgccggcagcacggagc 416 | |||||||| ||||| || | |||| ||||||| | || | || |||||| || Sbjct: 27338087 cgttcaagccgttcacgaacaggtacccgacgccgttcggggcgtcggggagcacgcggc 27338028 Query: 417 cgctctggtactcggtgaagatcgcctccgcccacatcatcgtgctctcctcctactcct 476 |||| ||||||||||||| ||| || || || ||| | |||||||| | || ||| | Sbjct: 27338027 cgctgtggtactcggtgaggatggcgtcggcgcacgtgatcgtgctggcgtcgtacgcgg 27337968 Query: 477 cctacggcaagtacacgccgcagtggacgtggctgagcgacgagctgggccgcgtcgacc 536 | ||||||||||||||||||||||||| ||||||| | |||||| | ||||| ||| Sbjct: 27337967 cgtacggcaagtacacgccgcagtggaggtggctggagggggagctgaggcgcgtggaca 27337908 Query: 537 gcagggccacgccgtggctcatcgtgctcatgcactcgccctggtacaacagcaacaact 596 | || ||||| ||||| |||||| | |||||||||| ||||||| ||||||| | Sbjct: 27337907 gggcggtgacgccatggctgatcgtgtgcgtgcactcgccgtggtacagcagcaacggat 27337848 Query: 597 accattacatggagggggagacgatgcgggtgcagttcgagc 638 |||| ||||||||||||||| ||||||| ||| ||||||||| Sbjct: 27337847 accactacatggagggggagtcgatgcgcgtggagttcgagc 27337806 Score = 103 bits (52), Expect = 7e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 16 caagtactactacgcgatggggttcggccacacggtgcggaccttctccttcaccaccct 75 ||||||||||||||| ||||| |||| ||||| || || ||||||||||||||||| | Sbjct: 27342771 caagtactactacgccatgggcttcgatcacaccgtccgtaccttctccttcaccacgcc 27342712 Query: 76 ccccaagcccggccccgacgtccccttcaagttcgggctcatcggtga 123 |||||||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 27342711 gcccaagcccgctcccgacgcccccttcaagttcggcctcatcggtga 27342664
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 605 bits (305), Expect = e-170 Identities = 469/523 (89%), Gaps = 3/523 (0%) Strand = Plus / Minus Query: 119 ggtgacctgggccagacgttcgactccaacagcacgctgtcgcactacgaggccaacggc 178 |||||||| || |||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 27266933 ggtgacctcgggcagacgttcgactcgaacagcacgctggcgcactacgaggccaacggc 27266874 Query: 179 ggcgacgcggtgctcttcgtgggcgacctctcctacgccgacgcctacccgctgcacgac 238 |||||||| || |||||||| ||||||||||||||||||||| |||||| || |||||| Sbjct: 27266873 ggcgacgccgtcctcttcgtcggcgacctctcctacgccgacaactaccctctccacgac 27266814 Query: 239 aaccggcggtgggacagctgggcgcgcttcgtggagcgcagcgtggcgtaccagccgtgg 298 ||| || ||||||| |||||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 27266813 aacaaccgctgggacacgtgggcgcgcttcgtcgagcgcagcgtcgcgtaccagccatgg 27266754 Query: 299 atctggacggccggcaaccacgagctggactacgcgccggagatcggcgagacggtgccc 358 |||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| ||| Sbjct: 27266753 atctggaccgccggcaaccacgagctggactacgcgccggagctgggcgagacggtcccc 27266694 Query: 359 ttcaagcccttcacccaccgctaccgcacgccgtacctcgccgccggcagcacggagccg 418 |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||| Sbjct: 27266693 ttcaagcccttcacccaccggtacccgacgccgtaccgcgccgccggcagcacggagccg 27266634 Query: 419 ctctggtactcggtgaagatcgcctccgcccacatcatcgtgctctcctcctactcctcc 478 |||||||||| || |||||||||||||| ||| |||||||||| ||||||||||| || Sbjct: 27266633 ttctggtactccgtcaagatcgcctccgcgcacgtcatcgtgctggcctcctactccgcc 27266574 Query: 479 tacggcaagtacacgccgcagtggacgtggctgagcgacgagctgg---gccgcgtcgac 535 |||||||||||||||||||||||||| |||||| || ||||| | |||||||||| Sbjct: 27266573 tacggcaagtacacgccgcagtggacatggctgcaggaggagctcgccacccgcgtcgac 27266514 Query: 536 cgcagggccacgccgtggctcatcgtgctcatgcactcgccctggtacaacagcaacaac 595 |||| | ||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 27266513 cgcaagctcaccccgtggctcatcgtgctcatgcactcgccgtggtacaacagcaacaac 27266454 Query: 596 taccattacatggagggggagacgatgcgggtgcagttcgagc 638 ||||| ||||||||||||||||||||||| || |||||||||| Sbjct: 27266453 taccactacatggagggggagacgatgcgcgtccagttcgagc 27266411 Score = 309 bits (156), Expect = 6e-81 Identities = 428/516 (82%), Gaps = 2/516 (0%) Strand = Plus / Minus Query: 110 gggctcatcggtgacctgggccagacgttcgactccaacagcacgctgtcgcactacgag 169 ||||||||||| ||| | || ||||| |||||||||||| ||| || | ||||||||| Sbjct: 27272849 gggctcatcggcgacatcgggcagaccttcgactccaacgccaccctcacccactacgag 27272790 Query: 170 gccaacggcggcgacgcggtgctcttcgtgggcgacctctcctacgccgacgcctacccg 229 ||| |||||||||||| || |||||| ||||||||||||||||||||||| |||||| Sbjct: 27272789 gcctccggcggcgacgccgtcctcttcatgggcgacctctcctacgccgacaagtacccg 27272730 Query: 230 ctgcacgacaaccggcggtgggacagctgggcgcgcttcgtggagcgcagcgtggcgtac 289 || ||||||||| |||||||||| |||| |||||| ||||||||||||||||||| Sbjct: 27272729 ctccacgacaacaaccggtgggacacgtggggccgcttctcggagcgcagcgtggcgtac 27272670 Query: 290 cagccgtggatctggacggccggcaaccacgagctggactacgcgccggagatcggcgag 349 ||||| ||||||||| ||| |||||||||||| | |||||||| |||||| | || ||| Sbjct: 27272669 cagccatggatctgggtggctggcaaccacgagatcgactacgccccggagctgggggag 27272610 Query: 350 acggtgcccttcaagcccttcacccaccgctaccgcacgccgtacctcgcc-gccggcag 408 ||| ||| ||||||||||||||||||||||||| |||||| |||||||| || | | Sbjct: 27272609 acgaagccgttcaagcccttcacccaccgctacccgacgccgcacctcgccagcgcgtcg 27272550 Query: 409 cacggagccgctctggtactcggtgaagatcgcctccgcccacatcatcgtgctctcctc 468 | |||||||| |||||||||||||||| | || || | |||||||||||||||||||| Sbjct: 27272549 c-cggagccgtactggtactcggtgaagctggcgtcggtgcacatcatcgtgctctcctc 27272491 Query: 469 ctactcctcctacggcaagtacacgccgcagtggacgtggctgagcgacgagctgggccg 528 ||||||| | | || |||||||||||||||||||| ||||||| | |||||||| || Sbjct: 27272490 ctactccgcgttcgccaagtacacgccgcagtggaagtggctggaggcggagctggggcg 27272431 Query: 529 cgtcgaccgcagggccacgccgtggctcatcgtgctcatgcactcgccctggtacaacag 588 || |||| || | ||||||||||| ||| || ||||||||| ||||||||||| Sbjct: 27272430 ggttaaccggagcgagacgccgtggctgatcatggcgtcgcactcgccgtggtacaacag 27272371 Query: 589 caacaactaccattacatggagggggagacgatgcg 624 |||||||| ||| ||||||||||||||| ||||||| Sbjct: 27272370 caacaacttccactacatggagggggagtcgatgcg 27272335 Score = 281 bits (142), Expect = 1e-72 Identities = 472/582 (81%) Strand = Plus / Minus Query: 57 ccttctccttcaccaccctccccaagcccggccccgacgtccccttcaagttcgggctca 116 ||||||||||||| || | ||||||||||| |||||||| || | |||||||||||||| Sbjct: 27263987 ccttctccttcacgacgccgcccaagcccgggcccgacgtgccgtacaagttcgggctca 27263928 Query: 117 tcggtgacctgggccagacgttcgactccaacagcacgctgtcgcactacgaggccaacg 176 |||| ||||| || ||||||||| |||||||| ||||||| ||||||||||| || Sbjct: 27263927 tcggcgacctcgggcagacgttccactccaacgacacgctgagccactacgaggcgtgcg 27263868 Query: 177 gcggcgacgcggtgctcttcgtgggcgacctctcctacgccgacgcctacccgctgcacg 236 |||||||||||||||| ||| | |||||||| || ||||| ||| | ||||| ||||| Sbjct: 27263867 gcggcgacgcggtgctgttcatcggcgacctgtcgtacgcggacaaccacccggggcacg 27263808 Query: 237 acaaccggcggtgggacagctgggcgcgcttcgtggagcgcagcgtggcgtaccagccgt 296 ||||| |||||||||| |||||||| ||||||||||| ||||||||||||||||||| Sbjct: 27263807 acaacaaccggtgggacacgtgggcgcggttcgtggagcggagcgtggcgtaccagccgt 27263748 Query: 297 ggatctggacggccggcaaccacgagctggactacgcgccggagatcggcgagacggtgc 356 ||||||||||| | || |||||||||||||||| |||||||||| | || |||||| || Sbjct: 27263747 ggatctggacgacggggaaccacgagctggacttcgcgccggagctgggggagacgacgc 27263688 Query: 357 ccttcaagcccttcacccaccgctaccgcacgccgtacctcgccgccggcagcacggagc 416 | |||||||| ||||| || | |||| ||||||| | || | || |||||| || Sbjct: 27263687 cgttcaagccgttcacgaacaggtacccgacgccgttcggggcgtcggggagcacgcggc 27263628 Query: 417 cgctctggtactcggtgaagatcgcctccgcccacatcatcgtgctctcctcctactcct 476 |||| ||||||||||||| ||| || || || ||| | |||||||| | || ||| | Sbjct: 27263627 cgctgtggtactcggtgaggatggcgtcggcgcacgtgatcgtgctggcgtcgtacgcgg 27263568 Query: 477 cctacggcaagtacacgccgcagtggacgtggctgagcgacgagctgggccgcgtcgacc 536 | ||||||||||||||||||||||||| ||||||| | |||||| | ||||| ||| Sbjct: 27263567 cgtacggcaagtacacgccgcagtggaggtggctggagggggagctgaggcgcgtggaca 27263508 Query: 537 gcagggccacgccgtggctcatcgtgctcatgcactcgccctggtacaacagcaacaact 596 | || ||||| ||||| |||||| | |||||||||| ||||||| ||||||| | Sbjct: 27263507 gggcggtgacgccatggctgatcgtgtgcgtgcactcgccgtggtacagcagcaacggat 27263448 Query: 597 accattacatggagggggagacgatgcgggtgcagttcgagc 638 |||| ||||||||||||||| ||||||| ||| ||||||||| Sbjct: 27263447 accactacatggagggggagtcgatgcgcgtggagttcgagc 27263406 Score = 103 bits (52), Expect = 7e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 16 caagtactactacgcgatggggttcggccacacggtgcggaccttctccttcaccaccct 75 ||||||||||||||| ||||| |||| ||||| || || ||||||||||||||||| | Sbjct: 27268371 caagtactactacgccatgggcttcgatcacaccgtccgtaccttctccttcaccacgcc 27268312 Query: 76 ccccaagcccggccccgacgtccccttcaagttcgggctcatcggtga 123 |||||||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 27268311 gcccaagcccgctcccgacgcccccttcaagttcggcctcatcggtga 27268264
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 605 bits (305), Expect = e-170 Identities = 469/523 (89%), Gaps = 3/523 (0%) Strand = Plus / Minus Query: 119 ggtgacctgggccagacgttcgactccaacagcacgctgtcgcactacgaggccaacggc 178 |||||||| || |||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 9653 ggtgacctcgggcagacgttcgactcgaacagcacgctggcgcactacgaggccaacggc 9594 Query: 179 ggcgacgcggtgctcttcgtgggcgacctctcctacgccgacgcctacccgctgcacgac 238 |||||||| || |||||||| ||||||||||||||||||||| |||||| || |||||| Sbjct: 9593 ggcgacgccgtcctcttcgtcggcgacctctcctacgccgacaactaccctctccacgac 9534 Query: 239 aaccggcggtgggacagctgggcgcgcttcgtggagcgcagcgtggcgtaccagccgtgg 298 ||| || ||||||| |||||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 9533 aacaaccgctgggacacgtgggcgcgcttcgtcgagcgcagcgtcgcgtaccagccatgg 9474 Query: 299 atctggacggccggcaaccacgagctggactacgcgccggagatcggcgagacggtgccc 358 |||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| ||| Sbjct: 9473 atctggaccgccggcaaccacgagctggactacgcgccggagctgggcgagacggtcccc 9414 Query: 359 ttcaagcccttcacccaccgctaccgcacgccgtacctcgccgccggcagcacggagccg 418 |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||| Sbjct: 9413 ttcaagcccttcacccaccggtacccgacgccgtaccgcgccgccggcagcacggagccg 9354 Query: 419 ctctggtactcggtgaagatcgcctccgcccacatcatcgtgctctcctcctactcctcc 478 |||||||||| || |||||||||||||| ||| |||||||||| ||||||||||| || Sbjct: 9353 ttctggtactccgtcaagatcgcctccgcgcacgtcatcgtgctggcctcctactccgcc 9294 Query: 479 tacggcaagtacacgccgcagtggacgtggctgagcgacgagctgg---gccgcgtcgac 535 |||||||||||||||||||||||||| |||||| || ||||| | |||||||||| Sbjct: 9293 tacggcaagtacacgccgcagtggacatggctgcaggaggagctcgccacccgcgtcgac 9234 Query: 536 cgcagggccacgccgtggctcatcgtgctcatgcactcgccctggtacaacagcaacaac 595 |||| | ||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 9233 cgcaagctcaccccgtggctcatcgtgctcatgcactcgccgtggtacaacagcaacaac 9174 Query: 596 taccattacatggagggggagacgatgcgggtgcagttcgagc 638 ||||| ||||||||||||||||||||||| || |||||||||| Sbjct: 9173 taccactacatggagggggagacgatgcgcgtccagttcgagc 9131 Score = 309 bits (156), Expect = 6e-81 Identities = 428/516 (82%), Gaps = 2/516 (0%) Strand = Plus / Minus Query: 110 gggctcatcggtgacctgggccagacgttcgactccaacagcacgctgtcgcactacgag 169 ||||||||||| ||| | || ||||| |||||||||||| ||| || | ||||||||| Sbjct: 15569 gggctcatcggcgacatcgggcagaccttcgactccaacgccaccctcacccactacgag 15510 Query: 170 gccaacggcggcgacgcggtgctcttcgtgggcgacctctcctacgccgacgcctacccg 229 ||| |||||||||||| || |||||| ||||||||||||||||||||||| |||||| Sbjct: 15509 gcctccggcggcgacgccgtcctcttcatgggcgacctctcctacgccgacaagtacccg 15450 Query: 230 ctgcacgacaaccggcggtgggacagctgggcgcgcttcgtggagcgcagcgtggcgtac 289 || ||||||||| |||||||||| |||| |||||| ||||||||||||||||||| Sbjct: 15449 ctccacgacaacaaccggtgggacacgtggggccgcttctcggagcgcagcgtggcgtac 15390 Query: 290 cagccgtggatctggacggccggcaaccacgagctggactacgcgccggagatcggcgag 349 ||||| ||||||||| ||| |||||||||||| | |||||||| |||||| | || ||| Sbjct: 15389 cagccatggatctgggtggctggcaaccacgagatcgactacgccccggagctgggggag 15330 Query: 350 acggtgcccttcaagcccttcacccaccgctaccgcacgccgtacctcgcc-gccggcag 408 ||| ||| ||||||||||||||||||||||||| |||||| |||||||| || | | Sbjct: 15329 acgaagccgttcaagcccttcacccaccgctacccgacgccgcacctcgccagcgcgtcg 15270 Query: 409 cacggagccgctctggtactcggtgaagatcgcctccgcccacatcatcgtgctctcctc 468 | |||||||| |||||||||||||||| | || || | |||||||||||||||||||| Sbjct: 15269 c-cggagccgtactggtactcggtgaagctggcgtcggtgcacatcatcgtgctctcctc 15211 Query: 469 ctactcctcctacggcaagtacacgccgcagtggacgtggctgagcgacgagctgggccg 528 ||||||| | | || |||||||||||||||||||| ||||||| | |||||||| || Sbjct: 15210 ctactccgcgttcgccaagtacacgccgcagtggaagtggctggaggcggagctggggcg 15151 Query: 529 cgtcgaccgcagggccacgccgtggctcatcgtgctcatgcactcgccctggtacaacag 588 || |||| || | ||||||||||| ||| || ||||||||| ||||||||||| Sbjct: 15150 ggttaaccggagcgagacgccgtggctgatcatggcgtcgcactcgccgtggtacaacag 15091 Query: 589 caacaactaccattacatggagggggagacgatgcg 624 |||||||| ||| ||||||||||||||| ||||||| Sbjct: 15090 caacaacttccactacatggagggggagtcgatgcg 15055 Score = 281 bits (142), Expect = 1e-72 Identities = 472/582 (81%) Strand = Plus / Minus Query: 57 ccttctccttcaccaccctccccaagcccggccccgacgtccccttcaagttcgggctca 116 ||||||||||||| || | ||||||||||| |||||||| || | |||||||||||||| Sbjct: 6707 ccttctccttcacgacgccgcccaagcccgggcccgacgtgccgtacaagttcgggctca 6648 Query: 117 tcggtgacctgggccagacgttcgactccaacagcacgctgtcgcactacgaggccaacg 176 |||| ||||| || ||||||||| |||||||| ||||||| ||||||||||| || Sbjct: 6647 tcggcgacctcgggcagacgttccactccaacgacacgctgagccactacgaggcgtgcg 6588 Query: 177 gcggcgacgcggtgctcttcgtgggcgacctctcctacgccgacgcctacccgctgcacg 236 |||||||||||||||| ||| | |||||||| || ||||| ||| | ||||| ||||| Sbjct: 6587 gcggcgacgcggtgctgttcatcggcgacctgtcgtacgcggacaaccacccggggcacg 6528 Query: 237 acaaccggcggtgggacagctgggcgcgcttcgtggagcgcagcgtggcgtaccagccgt 296 ||||| |||||||||| |||||||| ||||||||||| ||||||||||||||||||| Sbjct: 6527 acaacaaccggtgggacacgtgggcgcggttcgtggagcggagcgtggcgtaccagccgt 6468 Query: 297 ggatctggacggccggcaaccacgagctggactacgcgccggagatcggcgagacggtgc 356 ||||||||||| | || |||||||||||||||| |||||||||| | || |||||| || Sbjct: 6467 ggatctggacgacggggaaccacgagctggacttcgcgccggagctgggggagacgacgc 6408 Query: 357 ccttcaagcccttcacccaccgctaccgcacgccgtacctcgccgccggcagcacggagc 416 | |||||||| ||||| || | |||| ||||||| | || | || |||||| || Sbjct: 6407 cgttcaagccgttcacgaacaggtacccgacgccgttcggggcgtcggggagcacgcggc 6348 Query: 417 cgctctggtactcggtgaagatcgcctccgcccacatcatcgtgctctcctcctactcct 476 |||| ||||||||||||| ||| || || || ||| | |||||||| | || ||| | Sbjct: 6347 cgctgtggtactcggtgaggatggcgtcggcgcacgtgatcgtgctggcgtcgtacgcgg 6288 Query: 477 cctacggcaagtacacgccgcagtggacgtggctgagcgacgagctgggccgcgtcgacc 536 | ||||||||||||||||||||||||| ||||||| | |||||| | ||||| ||| Sbjct: 6287 cgtacggcaagtacacgccgcagtggaggtggctggagggggagctgaggcgcgtggaca 6228 Query: 537 gcagggccacgccgtggctcatcgtgctcatgcactcgccctggtacaacagcaacaact 596 | || ||||| ||||| |||||| | |||||||||| ||||||| ||||||| | Sbjct: 6227 gggcggtgacgccatggctgatcgtgtgcgtgcactcgccgtggtacagcagcaacggat 6168 Query: 597 accattacatggagggggagacgatgcgggtgcagttcgagc 638 |||| ||||||||||||||| ||||||| ||| ||||||||| Sbjct: 6167 accactacatggagggggagtcgatgcgcgtggagttcgagc 6126 Score = 103 bits (52), Expect = 7e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 16 caagtactactacgcgatggggttcggccacacggtgcggaccttctccttcaccaccct 75 ||||||||||||||| ||||| |||| ||||| || || ||||||||||||||||| | Sbjct: 11091 caagtactactacgccatgggcttcgatcacaccgtccgtaccttctccttcaccacgcc 11032 Query: 76 ccccaagcccggccccgacgtccccttcaagttcgggctcatcggtga 123 |||||||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 11031 gcccaagcccgctcccgacgcccccttcaagttcggcctcatcggtga 10984
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 165 bits (83), Expect = 2e-37 Identities = 205/247 (82%), Gaps = 14/247 (5%) Strand = Plus / Plus Query: 272 gagcgcagcgtggcgtaccagccgtggatctggacggccggcaaccacgagctggactac 331 |||| |||||| ||||||||||| ||||||||||| ||||||||||||||||| |||| | Sbjct: 33339609 gagcacagcgtcgcgtaccagccatggatctggaccgccggcaaccacgagctagacttc 33339668 Query: 332 gcgccggagatcggcgagacggtgcccttcaagcccttcacccaccgctaccgcacgccg 391 | ||||||| |||| ||||| || |||||||||||||||||||||||||||| || ||| Sbjct: 33339669 gtgccggagctcggggagaccgtccccttcaagcccttcacccaccgctacccgacaccg 33339728 Query: 392 tac------ctcgccgccggcagcacggagccgctctggtactcggtgaaga-------- 437 ||| | |||||||| ||||||| |||| |||||||||| || |||| Sbjct: 33339729 taccgcgcgcgcgccgccgccagcacgaagcccttctggtactccgtcaagatcgcctat 33339788 Query: 438 tcgcctccgcccacatcatcgtgctctcctcctactcctcctacggcaagtacacgccgc 497 |||||||||| ||| || ||||||| ||||||||||| |||||||||||||||||| || Sbjct: 33339789 tcgcctccgcgcacgtcgtcgtgctggcctcctactccacctacggcaagtacacgctgc 33339848 Query: 498 agtggac 504 ||||||| Sbjct: 33339849 agtggac 33339855 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 556 catcgtgctcatgcactcgccctggtacaacagcaacaactaccattacatggaggggga 615 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 33339891 catcgtgctcatgcactcgccgtggtacaacagcaacaactaccactacatggaggggga 33339950 Query: 616 gacgatgcgggtgcagttcgagc 638 || |||||| || |||||||||| Sbjct: 33339951 gatgatgcgtgtccagttcgagc 33339973 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctcc 77 |||||||||||||||||||| Sbjct: 43068724 cttctccttcaccaccctcc 43068743
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1070A12 Length = 148449 Score = 165 bits (83), Expect = 2e-37 Identities = 205/247 (82%), Gaps = 14/247 (5%) Strand = Plus / Plus Query: 272 gagcgcagcgtggcgtaccagccgtggatctggacggccggcaaccacgagctggactac 331 |||| |||||| ||||||||||| ||||||||||| ||||||||||||||||| |||| | Sbjct: 132856 gagcacagcgtcgcgtaccagccatggatctggaccgccggcaaccacgagctagacttc 132915 Query: 332 gcgccggagatcggcgagacggtgcccttcaagcccttcacccaccgctaccgcacgccg 391 | ||||||| |||| ||||| || |||||||||||||||||||||||||||| || ||| Sbjct: 132916 gtgccggagctcggggagaccgtccccttcaagcccttcacccaccgctacccgacaccg 132975 Query: 392 tac------ctcgccgccggcagcacggagccgctctggtactcggtgaaga-------- 437 ||| | |||||||| ||||||| |||| |||||||||| || |||| Sbjct: 132976 taccgcgcgcgcgccgccgccagcacgaagcccttctggtactccgtcaagatcgcctat 133035 Query: 438 tcgcctccgcccacatcatcgtgctctcctcctactcctcctacggcaagtacacgccgc 497 |||||||||| ||| || ||||||| ||||||||||| |||||||||||||||||| || Sbjct: 133036 tcgcctccgcgcacgtcgtcgtgctggcctcctactccacctacggcaagtacacgctgc 133095 Query: 498 agtggac 504 ||||||| Sbjct: 133096 agtggac 133102 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 556 catcgtgctcatgcactcgccctggtacaacagcaacaactaccattacatggaggggga 615 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 133138 catcgtgctcatgcactcgccgtggtacaacagcaacaactaccactacatggaggggga 133197 Query: 616 gacgatgcgggtgcagttcgagc 638 || |||||| || |||||||||| Sbjct: 133198 gatgatgcgtgtccagttcgagc 133220
>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415A04 Length = 160669 Score = 165 bits (83), Expect = 2e-37 Identities = 205/247 (82%), Gaps = 14/247 (5%) Strand = Plus / Plus Query: 272 gagcgcagcgtggcgtaccagccgtggatctggacggccggcaaccacgagctggactac 331 |||| |||||| ||||||||||| ||||||||||| ||||||||||||||||| |||| | Sbjct: 15775 gagcacagcgtcgcgtaccagccatggatctggaccgccggcaaccacgagctagacttc 15834 Query: 332 gcgccggagatcggcgagacggtgcccttcaagcccttcacccaccgctaccgcacgccg 391 | ||||||| |||| ||||| || |||||||||||||||||||||||||||| || ||| Sbjct: 15835 gtgccggagctcggggagaccgtccccttcaagcccttcacccaccgctacccgacaccg 15894 Query: 392 tac------ctcgccgccggcagcacggagccgctctggtactcggtgaaga-------- 437 ||| | |||||||| ||||||| |||| |||||||||| || |||| Sbjct: 15895 taccgcgcgcgcgccgccgccagcacgaagcccttctggtactccgtcaagatcgcctat 15954 Query: 438 tcgcctccgcccacatcatcgtgctctcctcctactcctcctacggcaagtacacgccgc 497 |||||||||| ||| || ||||||| ||||||||||| |||||||||||||||||| || Sbjct: 15955 tcgcctccgcgcacgtcgtcgtgctggcctcctactccacctacggcaagtacacgctgc 16014 Query: 498 agtggac 504 ||||||| Sbjct: 16015 agtggac 16021 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 556 catcgtgctcatgcactcgccctggtacaacagcaacaactaccattacatggaggggga 615 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 16057 catcgtgctcatgcactcgccgtggtacaacagcaacaactaccactacatggaggggga 16116 Query: 616 gacgatgcgggtgcagttcgagc 638 || |||||| || |||||||||| Sbjct: 16117 gatgatgcgtgtccagttcgagc 16139
>ref|NM_191538.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 684 Score = 133 bits (67), Expect = 8e-28 Identities = 97/107 (90%) Strand = Plus / Plus Query: 277 cagcgtggcgtaccagccgtggatctggacggccggcaaccacgagctggactacgcgcc 336 |||||| ||||||||||| ||||||||||| ||||||||||||||||| |||| || ||| Sbjct: 30 cagcgtcgcgtaccagccatggatctggaccgccggcaaccacgagctagacttcgtgcc 89 Query: 337 ggagatcggcgagacggtgcccttcaagcccttcacccaccgctacc 383 |||| |||| ||||| || |||||||||||||||||||||||||||| Sbjct: 90 ggagctcggggagaccgtccccttcaagcccttcacccaccgctacc 136 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 556 catcgtgctcatgcactcgccctggtacaacagcaacaactaccattacatggaggggga 615 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 207 catcgtgctcatgcactcgccgtggtacaacagcaacaactaccactacatggaggggga 266 Query: 616 gacgatgcgggtgcagttcgagc 638 || |||||| || |||||||||| Sbjct: 267 gatgatgcgtgtccagttcgagc 289
>ref|NM_119798.1| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase AT4G36350 mRNA, complete cds Length = 1401 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 569 cactcgccctggtacaacagcaacaactaccattacatgga 609 |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 940 cactcgccgtggtacaacagtaataactaccattacatgga 980
>gb|AY390529.1| Arabidopsis thaliana putative purple acid phosphatase (PAP25) mRNA, complete cds Length = 1401 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 569 cactcgccctggtacaacagcaacaactaccattacatgga 609 |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 940 cactcgccgtggtacaacagtaataactaccattacatgga 980
>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2 Length = 198354 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 569 cactcgccctggtacaacagcaacaactaccattacatgga 609 |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 195129 cactcgccgtggtacaacagtaataactaccattacatgga 195169
>emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 85 Length = 198750 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 569 cactcgccctggtacaacagcaacaactaccattacatgga 609 |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 55599 cactcgccgtggtacaacagtaataactaccattacatgga 55559
>emb|AL022141.1|ATF23E13 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E13 (ESSAII project) Length = 94695 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 569 cactcgccctggtacaacagcaacaactaccattacatgga 609 |||||||| ||||||||||| || ||||||||||||||||| Sbjct: 78877 cactcgccgtggtacaacagtaataactaccattacatgga 78837
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 367 cttcacccaccgctaccgcacgccgt 392 ||||||| |||||||||||||||||| Sbjct: 3883299 cttcaccgaccgctaccgcacgccgt 3883324
>dbj|AB161665.1| Cryptomeria japonica DNA, microsatellite locus, clone: CS1906 Length = 681 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 465 cctcctactcctcctacggcaa 486 |||||||||||||||||||||| Sbjct: 556 cctcctactcctcctacggcaa 535
>ref|NM_104516.1| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase AT1G56360 mRNA, complete cds Length = 1401 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 569 cactcgccctggtacaacagcaacaactaccattacatgga 609 ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 940 cactctccgtggtacaacagtaataactatcattacatgga 980
>gb|AY842022.1| Arabidopsis thaliana putative purple acid phosphatase (PAP6) mRNA, complete cds Length = 1401 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 569 cactcgccctggtacaacagcaacaactaccattacatgga 609 ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 940 cactctccgtggtacaacagtaataactatcattacatgga 980
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 cgccgtacctcgccgccggca 407 ||||||||||||||||||||| Sbjct: 3632002 cgccgtacctcgccgccggca 3632022 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cggagatcggcgagacggtg 355 |||||||||||||||||||| Sbjct: 1114072 cggagatcggcgagacggtg 1114091
>ref|XM_469605.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1761 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 385 cacgccgtacctcgccgccggcagc 409 |||||||||||||||||||| |||| Sbjct: 1044 cacgccgtacctcgccgccgtcagc 1020
>gb|AF399559.1| Homo sapiens clone OR1F1 olfactory receptor gene, partial cds Length = 650 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctccccaag 82 |||||||||||||||| |||||||| Sbjct: 15 cttctccttcaccaccgtccccaag 39
>ref|NM_012360.1| Homo sapiens olfactory receptor, family 1, subfamily F, member 1 (OR1F1), mRNA Length = 939 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctccccaag 82 |||||||||||||||| |||||||| Sbjct: 216 cttctccttcaccaccgtccccaag 240
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 cacgccgtacctcgccgccggcagc 409 |||||||||||||||||||| |||| Sbjct: 29493254 cacgccgtacctcgccgccgtcagc 29493278 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 cctctcctacgccgacgcct 224 |||||||||||||||||||| Sbjct: 9069495 cctctcctacgccgacgcct 9069514
>gb|DQ446366.1| Arabidopsis thaliana clone pENTR221-At1g56360 calcineurin-like phosphoesterase family protein (At1g56360) mRNA, complete cds Length = 1401 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 569 cactcgccctggtacaacagcaacaactaccattacatgga 609 ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 940 cactctccgtggtacaacagtaataactatcattacatgga 980
>gb|BC069335.1| Homo sapiens olfactory receptor, family 1, subfamily F, member 1, mRNA (cDNA clone MGC:97054 IMAGE:7262265), complete cds Length = 939 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctccccaag 82 |||||||||||||||| |||||||| Sbjct: 216 cttctccttcaccaccgtccccaag 240
>gb|AC010168.6| Homo sapiens 12p12-31.7-32.2 BAC RP11-174G6 (Rosewell Park Cancer Institute Human Bac Library) complete sequence Length = 104926 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 acaacagcaacaactaccatt 602 ||||||||||||||||||||| Sbjct: 97181 acaacagcaacaactaccatt 97161
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 ccaagcccggccccgacgtcc 98 ||||||||||||||||||||| Sbjct: 2721721 ccaagcccggccccgacgtcc 2721741
>tpg|BK004247.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR16-4 gene, complete cds Length = 939 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctccccaag 82 |||||||||||||||| |||||||| Sbjct: 216 cttctccttcaccaccgtccccaag 240
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 cacgccgtacctcgccgccggcagc 409 |||||||||||||||||||| |||| Sbjct: 29584676 cacgccgtacctcgccgccgtcagc 29584700 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 cctctcctacgccgacgcct 224 |||||||||||||||||||| Sbjct: 9067328 cctctcctacgccgacgcct 9067347
>gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BAC F13N6 genomic sequence, complete sequence Length = 90698 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 569 cactcgccctggtacaacagcaacaactaccattacatgga 609 ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 9161 cactctccgtggtacaacagtaataactatcattacatgga 9121
>gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14G9 genomic sequence, complete sequence Length = 111481 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 569 cactcgccctggtacaacagcaacaactaccattacatgga 609 ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 9070 cactctccgtggtacaacagtaataactatcattacatgga 9110
>gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genomic sequence, complete sequence Length = 132782 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 cacgccgtacctcgccgccggcagc 409 |||||||||||||||||||| |||| Sbjct: 15884 cacgccgtacctcgccgccgtcagc 15908
>dbj|AK108046.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-E10, full insert sequence Length = 1981 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 385 cacgccgtacctcgccgccggcagc 409 |||||||||||||||||||| |||| Sbjct: 1113 cacgccgtacctcgccgccgtcagc 1089
>gb|U86239.1|U86239 Homo sapiens olfactory receptor (OR16-90) gene, partial cds Length = 649 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctccccaag 82 |||||||||||||||| |||||||| Sbjct: 16 cttctccttcaccaccgtccccaag 40
>gb|U86237.1|U86237 Homo sapiens olfactory receptor (OR16-88) gene, partial cds Length = 649 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctccccaag 82 |||||||||||||||| |||||||| Sbjct: 16 cttctccttcaccaccgtccccaag 40
>gb|U86235.1|U86235 Homo sapiens olfactory receptor (OR16-36) gene, partial cds Length = 649 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctccccaag 82 |||||||||||||||| |||||||| Sbjct: 16 cttctccttcaccaccgtccccaag 40
>gb|U86234.1|U86234 Homo sapiens olfactory receptor (OR16-35) gene, partial cds Length = 649 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctccccaag 82 |||||||||||||||| |||||||| Sbjct: 16 cttctccttcaccaccgtccccaag 40
>emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence between D16S3070 and D16S3275, containing Familial Mediterranean Fever gene disease Length = 239566 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctccccaag 82 |||||||||||||||| |||||||| Sbjct: 163691 cttctccttcaccaccgtccccaag 163715
>emb|Y14442.1|HSOLFMF Homo sapiens mRNA for olfactory receptor protein, partial Length = 942 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctccccaag 82 |||||||||||||||| |||||||| Sbjct: 216 cttctccttcaccaccgtccccaag 240
>dbj|AB065907.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_470 Length = 1339 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctccccaag 82 |||||||||||||||| |||||||| Sbjct: 416 cttctccttcaccaccgtccccaag 440
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cggagatcggcgagacggtg 355 |||||||||||||||||||| Sbjct: 420596 cggagatcggcgagacggtg 420615
>ref|XM_472396.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1359 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 ggcgacctctcctacgccgacgcc 223 |||||||| ||||||||||||||| Sbjct: 535 ggcgacctgtcctacgccgacgcc 558
>ref|XM_471106.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 813 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tctcctcctactcctcctac 481 |||||||||||||||||||| Sbjct: 12 tctcctcctactcctcctac 31
>ref|NM_187511.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1344 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 cctctcctacgccgacgcct 224 |||||||||||||||||||| Sbjct: 411 cctctcctacgccgacgcct 430
>ref|NM_196310.1| Oryza sativa (japonica cultivar-group) putative lipase (OSJNBa0068A07.21), mRNA Length = 1206 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 cgccgtacctcgccgccggc 406 |||||||||||||||||||| Sbjct: 290 cgccgtacctcgccgccggc 309
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 331 cgcgccggagatcggcgagacggt 354 ||||||||||||| |||||||||| Sbjct: 3145546 cgcgccggagatccgcgagacggt 3145523
>ref|NM_189491.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctcc 77 |||||||||||||||||||| Sbjct: 144 cttctccttcaccaccctcc 163
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 gagctgggccgcgtcgaccg 537 |||||||||||||||||||| Sbjct: 3617834 gagctgggccgcgtcgaccg 3617815
>ref|XM_958399.1| Neurospora crassa OR74A hypothetical protein (NCU05404.1) partial mRNA Length = 1386 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 agatcgcctccgcccacatc 454 |||||||||||||||||||| Sbjct: 56 agatcgcctccgcccacatc 75
>ref|XM_325258.1| Neurospora crassa OR74A hypothetical protein (NCU05404.1) partial mRNA Length = 1386 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 agatcgcctccgcccacatc 454 |||||||||||||||||||| Sbjct: 56 agatcgcctccgcccacatc 75
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 cgacgagctgggccgcgtcg 533 |||||||||||||||||||| Sbjct: 1701731 cgacgagctgggccgcgtcg 1701712
>ref|XM_386436.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein (FG06260.1) partial mRNA Length = 1395 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cggccccgacgtccccttca 104 |||||||||||||||||||| Sbjct: 252 cggccccgacgtccccttca 271
>gb|AC146543.2| Gasterosteus aculeatus clone CH213-67L12, complete sequence Length = 197879 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 gctctcctcctactcctcct 479 |||||||||||||||||||| Sbjct: 161928 gctctcctcctactcctcct 161947
>gb|AC137603.16| Medicago truncatula clone mth2-14b10, complete sequence Length = 109793 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 575 ccctggtacaacagcaacaa 594 |||||||||||||||||||| Sbjct: 11879 ccctggtacaacagcaacaa 11898
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 gcagcgtggcgtaccagccg 295 |||||||||||||||||||| Sbjct: 3746826 gcagcgtggcgtaccagccg 3746807
>ref|XM_504621.1| Yarrowia lipolytica CLIB122, YALI0E31130g predicted mRNA Length = 2547 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ccccaagcccggccccgacg 95 |||||||||||||||||||| Sbjct: 1374 ccccaagcccggccccgacg 1393
>emb|AL162726.16| Human DNA sequence from clone RP11-15B24 on chromosome 9 Contains a cytochrome c oxidase III (COIII) (MTCO3) pseudogene, a novel pseudogene and three novel genes, complete sequence Length = 195824 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 580 gtacaacagcaacaactaccatta 603 |||||||| ||||||||||||||| Sbjct: 89110 gtacaacaacaacaactaccatta 89087
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 cgacgagctgggccgcgtcg 533 |||||||||||||||||||| Sbjct: 3036633 cgacgagctgggccgcgtcg 3036614
>emb|AL731635.3|OSJN00277 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016B03, complete sequence Length = 125780 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tctcctcctactcctcctac 481 |||||||||||||||||||| Sbjct: 4531 tctcctcctactcctcctac 4550
>emb|AL606689.4|OSJN00078 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042N22, complete sequence Length = 152676 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 tctcctcctactcctcctac 481 |||||||||||||||||||| Sbjct: 79892 tctcctcctactcctcctac 79873
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 ggcgacctctcctacgccgacgcc 223 |||||||| ||||||||||||||| Sbjct: 24372 ggcgacctgtcctacgccgacgcc 24349
>emb|AL389900.2|NCB15I20 Neurospora crassa DNA linkage group II BAC clone B15I20 Length = 47481 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 agatcgcctccgcccacatc 454 |||||||||||||||||||| Sbjct: 34378 agatcgcctccgcccacatc 34397
>emb|AL389901.1|NCB7F21 Neurospora crassa DNA linkage group II BAC clone B7F21 Length = 59412 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 agatcgcctccgcccacatc 454 |||||||||||||||||||| Sbjct: 49843 agatcgcctccgcccacatc 49824
>gb|AC144489.2| Gasterosteus aculeatus clone CH213-2D11, complete sequence Length = 228976 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 gctctcctcctactcctcct 479 |||||||||||||||||||| Sbjct: 9845 gctctcctcctactcctcct 9864
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 cgccgtacctcgccgccggc 406 |||||||||||||||||||| Sbjct: 136647 cgccgtacctcgccgccggc 136666
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 cgccgtacctcgccgccggc 406 |||||||||||||||||||| Sbjct: 147002 cgccgtacctcgccgccggc 146983
>gb|AC005912.1| Homo sapiens 12 BAC RPCI11-543P15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165516 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 ccttctccttcaccaccctcccca 80 ||||||||||| |||||||||||| Sbjct: 72710 ccttctccttctccaccctcccca 72733
>emb|BX322574.10| Zebrafish DNA sequence from clone DKEY-35I15 in linkage group 3, complete sequence Length = 150999 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 581 tacaacagcaacaactacca 600 |||||||||||||||||||| Sbjct: 119759 tacaacagcaacaactacca 119778 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 581 tacaacagcaacaactacca 600 |||||||||||||||||||| Sbjct: 119678 tacaacagcaacaactacca 119697
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ggtgctcttcgtgggcgacc 206 |||||||||||||||||||| Sbjct: 25811 ggtgctcttcgtgggcgacc 25792
>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08, complete sequence Length = 99910 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 cctctcctacgccgacgcct 224 |||||||||||||||||||| Sbjct: 76531 cctctcctacgccgacgcct 76550
>gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, complete sequence Length = 202651 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 gctctcctcctactcctcct 479 |||||||||||||||||||| Sbjct: 169153 gctctcctcctactcctcct 169172
>gb|AY686748.1| Rubrivivax gelatinosus strain 1 GprR (gprR) gene, partial cds; Rieske iron-sulfur protein (petA2) gene, complete cds; and FdxA (fdxA) gene, partial cds Length = 2234 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 cggcggcgacgcggtgctcttcgt 198 ||||||||| |||||||||||||| Sbjct: 395 cggcggcgaagcggtgctcttcgt 372
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 cgacgagctgggccgcgtcg 533 |||||||||||||||||||| Sbjct: 2185443 cgacgagctgggccgcgtcg 2185424
>gb|AC153435.6| Mus musculus 6 BAC RP23-112L19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 212041 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 tctcctcctactcctcctac 481 |||||||||||||||||||| Sbjct: 95651 tctcctcctactcctcctac 95632
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 ggcgacctctcctacgccgacgcc 223 |||||||| ||||||||||||||| Sbjct: 20293739 ggcgacctgtcctacgccgacgcc 20293716 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tctcctcctactcctcctac 481 |||||||||||||||||||| Sbjct: 2279212 tctcctcctactcctcctac 2279231 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 tctcctcctactcctcctac 481 |||||||||||||||||||| Sbjct: 1559726 tctcctcctactcctcctac 1559707
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 cgccgtacctcgccgccggc 406 |||||||||||||||||||| Sbjct: 12616560 cgccgtacctcgccgccggc 12616579
>gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0016G06, complete sequence Length = 119910 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 cctctcctacgccgacgcct 224 |||||||||||||||||||| Sbjct: 12675 cctctcctacgccgacgcct 12694
>emb|BX005394.8| Zebrafish DNA sequence from clone DKEY-3N15 in linkage group 3, complete sequence Length = 190575 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 581 tacaacagcaacaactacca 600 |||||||||||||||||||| Sbjct: 107802 tacaacagcaacaactacca 107783 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 581 tacaacagcaacaactacca 600 |||||||||||||||||||| Sbjct: 107721 tacaacagcaacaactacca 107702
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cttctccttcaccaccctcc 77 |||||||||||||||||||| Sbjct: 65753 cttctccttcaccaccctcc 65772
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 298 gatctggacggccggcaaccacgagctg 325 ||||||| || ||||||||||||||||| Sbjct: 3635163 gatctgggcgcccggcaaccacgagctg 3635190
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 ggcgcgcttcgtggagcgca 278 |||||||||||||||||||| Sbjct: 2550068 ggcgcgcttcgtggagcgca 2550087
>dbj|AK121649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060H09, full insert sequence Length = 1643 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 ggcgacctctcctacgccgacgcc 223 |||||||| ||||||||||||||| Sbjct: 592 ggcgacctgtcctacgccgacgcc 615
>dbj|AK108245.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-H05, full insert sequence Length = 1472 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 cgccgtacctcgccgccggc 406 |||||||||||||||||||| Sbjct: 353 cgccgtacctcgccgccggc 372
>dbj|AK105994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H04, full insert sequence Length = 1735 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 cctctcctacgccgacgcct 224 |||||||||||||||||||| Sbjct: 527 cctctcctacgccgacgcct 546
>dbj|AK103225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123A19, full insert sequence Length = 1990 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 cctctcctacgccgacgcct 224 |||||||||||||||||||| Sbjct: 788 cctctcctacgccgacgcct 807
>dbj|AK102985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116C01, full insert sequence Length = 2012 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 cctctcctacgccgacgcct 224 |||||||||||||||||||| Sbjct: 1053 cctctcctacgccgacgcct 1034
>dbj|AK101206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030P16, full insert sequence Length = 1965 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 cctctcctacgccgacgcct 224 |||||||||||||||||||| Sbjct: 821 cctctcctacgccgacgcct 840
>dbj|AK073177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033004M16, full insert sequence Length = 2293 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tctcctcctactcctcctac 481 |||||||||||||||||||| Sbjct: 40 tctcctcctactcctcctac 59
>dbj|AP003731.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-677N11, complete sequence Length = 33560 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gccgacgcctacccgctgca 234 |||||||||||||||||||| Sbjct: 777 gccgacgcctacccgctgca 796
>dbj|AP001822.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2336M4, complete sequence Length = 134278 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gccgacgcctacccgctgca 234 |||||||||||||||||||| Sbjct: 132366 gccgacgcctacccgctgca 132385
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 cgccgtacctcgccgccggc 406 |||||||||||||||||||| Sbjct: 12623900 cgccgtacctcgccgccggc 12623919
>emb|AL731612.3|OSJN00254 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070D17, complete sequence Length = 163376 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tctcctcctactcctcctac 481 |||||||||||||||||||| Sbjct: 104219 tctcctcctactcctcctac 104238
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ccccaagcccggccccgacg 95 |||||||||||||||||||| Sbjct: 3671357 ccccaagcccggccccgacg 3671376
>emb|AL626805.14| Mouse DNA sequence from clone RP23-118K16 on chromosome 4, complete sequence Length = 134717 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tctcctcctactcctcctac 481 |||||||||||||||||||| Sbjct: 69606 tctcctcctactcctcctac 69625
>dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic gene cluster Length = 104326 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 gatctggacggccggcaaccacgagctg 325 ||||||| || ||||||||||||||||| Sbjct: 2642 gatctgggcgcccggcaaccacgagctg 2615 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,377,238 Number of Sequences: 3902068 Number of extensions: 3377238 Number of successful extensions: 89375 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87186 Number of HSP's gapped (non-prelim): 2182 length of query: 642 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 619 effective length of database: 17,143,297,704 effective search space: 10611701278776 effective search space used: 10611701278776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
