ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62i24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073807.1| Oryza sativa (japonica cultivar-group) cDNA clon... 379 e-102
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 208 2e-50
3gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare str... 208 2e-50
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 208 2e-50
5emb|AL138823.14| Human DNA sequence from clone RP11-64J21 on chr... 44 0.55
6dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 44 0.55
7gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 44 0.55
8gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, comple... 44 0.55
9gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, comple... 44 0.55
10ref|NM_187511.1| Oryza sativa (japonica cultivar-group), predic... 42 2.2
11gb|AC091732.4| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
12ref|XM_418516.1| PREDICTED: Gallus gallus similar to KIAA0363 (L... 42 2.2
13ref|XM_584509.2| PREDICTED: Bos taurus hypothetical LOC507825 (L... 42 2.2
14gb|AC124213.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 2.2
15gb|AC121342.6| Homo sapiens X BAC RP11-86A5 (Roswell Park Cancer... 42 2.2
16gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
17dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
18gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
19dbj|AK105994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
20dbj|AK103225.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
21dbj|AK102985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
22dbj|AK101206.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
23gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
24gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 8.6
25gb|AY530550.1| Leucocarpus perfoliatus floricaula (FLO) mRNA, FL... 40 8.6
26ref|XM_545029.1| PREDICTED: Canis familiaris similar to alpha-ki... 40 8.6
27emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 8.6
28gb|AC163650.2| Mus musculus BAC clone RP24-383A20 from chromosom... 40 8.6
29emb|AL136128.9| Human DNA sequence from clone RP1-84N20 on chrom... 40 8.6
30emb|BX649501.24| Zebrafish DNA sequence from clone DKEY-123F20 i... 40 8.6
31dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
32gb|CP000249.1| Frankia sp. CcI3, complete genome 40 8.6
33emb|BX511085.16| Zebrafish DNA sequence from clone DKEY-273I10 i... 40 8.6
34dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
35dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
36emb|BX930474.1| Gallus gallus finished cDNA, clone ChEST628h5 40 8.6
37dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
38dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
39dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
40dbj|AK121605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
41dbj|AK070266.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
42gb|AY106230.1| Zea mays PCO119904 mRNA sequence 40 8.6
43gb|U33216.1|SPU33216 Streptomyces phaeochromogenes SphI methyltr... 40 8.6 
>dbj|AK073807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070I07, full
           insert sequence
          Length = 1870

 Score =  379 bits (191), Expect = e-102
 Identities = 368/427 (86%)
 Strand = Plus / Plus

                                                                       
Query: 200 gccgactcggtggttctcttcgccggcgcccgtggtggaggcgccgaggacggttgacgg 259
           |||||| |||||||||||||| |||||  | |||| ||||||||||| ||| |  |||||
Sbjct: 214 gccgacgcggtggttctcttccccggctacggtggcggaggcgccgatgaccgcggacgg 273

                                                                       
Query: 260 cctgactgtcgactctattgccgacaaggggtggacgatcctcgccgatgccgagagcga 319
            || || || ||||| || || |  |||||||||||||||||| |||| |||||||||||
Sbjct: 274 gctcacggtggactcgatcgcggggaaggggtggacgatcctccccgaggccgagagcga 333

                                                                       
Query: 320 ctggcggagccacgccgccgccgtcgcgcagtccatcaggcttattaagaagcgtctcaa 379
           |||||| ||||||||||||||||||||||||||| ||| ||| || |||||||| |||||
Sbjct: 334 ctggcgcagccacgccgccgccgtcgcgcagtccgtcaagctcatcaagaagcggctcaa 393

                                                                       
Query: 380 gtggaaatggttactggagaggtcgaagcagttggctgtggtattggagaagccagacct 439
           ||||  |||| |||| ||||| || | ||||||| ||||||| ||||||| ||| |||||
Sbjct: 394 gtggggatggatacttgagagatcaaggcagttgtctgtggtgttggagaggccggacct 453

                                                                       
Query: 440 ctgggaggatccagtttttgctgggaaggttagtcgtgaacaaggcgagctcatgggcaa 499
           |||||| ||||||||||| |||||||||||||| |||||||| || ||||||||||||||
Sbjct: 454 ctgggatgatccagttttcgctgggaaggttagccgtgaacatggtgagctcatgggcaa 513

                                                                       
Query: 500 gattaagtcagtgaatcaattcgagcaacagttgatggagcacatcgatatgttgaggct 559
           |||||| |||||||| |||||||||||  |||||||||||||||| || |||||||||||
Sbjct: 514 gattaaatcagtgaaccaattcgagcaggagttgatggagcacattgacatgttgaggct 573

                                                                       
Query: 560 tgcacgtgacgagggtgacaatgaacttgagacggaatccatgagagcattggccgatat 619
           |||| | || ||||  || |||||||||||||||||| ||||||| ||||| ||||| ||
Sbjct: 574 tgcaagagaagaggacgataatgaacttgagacggaaaccatgagggcattagccgaaat 633

                  
Query: 620 gagaaga 626
           |||||||
Sbjct: 634 gagaaga 640



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 69/77 (89%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                      
Query: 14 cgtcggagtagacgggaatggcttcccgcctcctaacc-gatcaacggccgcggtcctcg 72
          ||||||||  |||| ||||||||||||||||||||||| ||||||| ||||||  |||| 
Sbjct: 9  cgtcggagccgacgcgaatggcttcccgcctcctaaccagatcaaccgccgcgcgcctcc 68

                           
Query: 73 tctcccacctccgctcc 89
          |||||||||||||||||
Sbjct: 69 tctcccacctccgctcc 85
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  208 bits (105), Expect = 2e-50
 Identities = 183/209 (87%)
 Strand = Plus / Plus

                                                                            
Query: 386      atggttactggagaggtcgaagcagttggctgtggtattggagaagccagacctctggga 445
                |||| |||| ||||| || | ||||||| ||||||| ||||||| ||| |||||||||||
Sbjct: 10823224 atggatacttgagagatcaaggcagttgtctgtggtgttggagaggccggacctctggga 10823283

                                                                            
Query: 446      ggatccagtttttgctgggaaggttagtcgtgaacaaggcgagctcatgggcaagattaa 505
                 ||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||
Sbjct: 10823284 tgatccagttttcgctgggaaggttagccgtgaacatggtgagctcatgggcaagattaa 10823343

                                                                            
Query: 506      gtcagtgaatcaattcgagcaacagttgatggagcacatcgatatgttgaggcttgcacg 565
                 |||||||| |||||||||||  |||||||||||||||| || ||||||||||||||| |
Sbjct: 10823344 atcagtgaaccaattcgagcaggagttgatggagcacattgacatgttgaggcttgcaag 10823403

                                             
Query: 566      tgacgagggtgacaatgaacttgagacgg 594
                 || ||||  || ||||||||||||||||
Sbjct: 10823404 agaagaggacgataatgaacttgagacgg 10823432



 Score =  145 bits (73), Expect = 2e-31
 Identities = 154/181 (85%)
 Strand = Plus / Plus

                                                                            
Query: 200      gccgactcggtggttctcttcgccggcgcccgtggtggaggcgccgaggacggttgacgg 259
                |||||| |||||||||||||| |||||  | |||| ||||||||||| ||| |  |||||
Sbjct: 10822815 gccgacgcggtggttctcttccccggctacggtggcggaggcgccgatgaccgcggacgg 10822874

                                                                            
Query: 260      cctgactgtcgactctattgccgacaaggggtggacgatcctcgccgatgccgagagcga 319
                 || || || ||||| || || |  |||||||||||||||||| |||| |||||||||||
Sbjct: 10822875 gctcacggtggactcgatcgcggggaaggggtggacgatcctccccgaggccgagagcga 10822934

                                                                            
Query: 320      ctggcggagccacgccgccgccgtcgcgcagtccatcaggcttattaagaagcgtctcaa 379
                |||||| ||||||||||||||||||||||||||| ||| ||| || |||||||| |||||
Sbjct: 10822935 ctggcgcagccacgccgccgccgtcgcgcagtccgtcaagctcatcaagaagcggctcaa 10822994

                 
Query: 380      g 380
                |
Sbjct: 10822995 g 10822995



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 69/77 (89%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                            
Query: 14       cgtcggagtagacgggaatggcttcccgcctcctaacc-gatcaacggccgcggtcctcg 72
                ||||||||  |||| ||||||||||||||||||||||| ||||||| ||||||  |||| 
Sbjct: 10822610 cgtcggagccgacgcgaatggcttcccgcctcctaaccagatcaaccgccgcgcgcctcc 10822669

                                 
Query: 73       tctcccacctccgctcc 89
                |||||||||||||||||
Sbjct: 10822670 tctcccacctccgctcc 10822686



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 322     ggcggagccacgccgccgccgtcgc 346
               |||||||||||||||||| ||||||
Sbjct: 9069806 ggcggagccacgccgccgtcgtcgc 9069782
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>gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1275B08,
             from chromosome 3, complete sequence
          Length = 108833

 Score =  208 bits (105), Expect = 2e-50
 Identities = 183/209 (87%)
 Strand = Plus / Minus

                                                                         
Query: 386   atggttactggagaggtcgaagcagttggctgtggtattggagaagccagacctctggga 445
             |||| |||| ||||| || | ||||||| ||||||| ||||||| ||| |||||||||||
Sbjct: 31663 atggatacttgagagatcaaggcagttgtctgtggtgttggagaggccggacctctggga 31604

                                                                         
Query: 446   ggatccagtttttgctgggaaggttagtcgtgaacaaggcgagctcatgggcaagattaa 505
              ||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||
Sbjct: 31603 tgatccagttttcgctgggaaggttagccgtgaacatggtgagctcatgggcaagattaa 31544

                                                                         
Query: 506   gtcagtgaatcaattcgagcaacagttgatggagcacatcgatatgttgaggcttgcacg 565
              |||||||| |||||||||||  |||||||||||||||| || ||||||||||||||| |
Sbjct: 31543 atcagtgaaccaattcgagcaggagttgatggagcacattgacatgttgaggcttgcaag 31484

                                          
Query: 566   tgacgagggtgacaatgaacttgagacgg 594
              || ||||  || ||||||||||||||||
Sbjct: 31483 agaagaggacgataatgaacttgagacgg 31455



 Score =  145 bits (73), Expect = 2e-31
 Identities = 154/181 (85%)
 Strand = Plus / Minus

                                                                         
Query: 200   gccgactcggtggttctcttcgccggcgcccgtggtggaggcgccgaggacggttgacgg 259
             |||||| |||||||||||||| |||||  | |||| ||||||||||| ||| |  |||||
Sbjct: 32072 gccgacgcggtggttctcttccccggctacggtggcggaggcgccgatgaccgcggacgg 32013

                                                                         
Query: 260   cctgactgtcgactctattgccgacaaggggtggacgatcctcgccgatgccgagagcga 319
              || || || ||||| || || |  |||||||||||||||||| |||| |||||||||||
Sbjct: 32012 gctcacggtggactcgatcgcggggaaggggtggacgatcctccccgaggccgagagcga 31953

                                                                         
Query: 320   ctggcggagccacgccgccgccgtcgcgcagtccatcaggcttattaagaagcgtctcaa 379
             |||||| ||||||||||||||||||||||||||| ||| ||| || |||||||| |||||
Sbjct: 31952 ctggcgcagccacgccgccgccgtcgcgcagtccgtcaagctcatcaagaagcggctcaa 31893

              
Query: 380   g 380
             |
Sbjct: 31892 g 31892



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 69/77 (89%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                         
Query: 14    cgtcggagtagacgggaatggcttcccgcctcctaacc-gatcaacggccgcggtcctcg 72
             ||||||||  |||| ||||||||||||||||||||||| ||||||| ||||||  |||| 
Sbjct: 32277 cgtcggagccgacgcgaatggcttcccgcctcctaaccagatcaaccgccgcgcgcctcc 32218

                              
Query: 73    tctcccacctccgctcc 89
             |||||||||||||||||
Sbjct: 32217 tctcccacctccgctcc 32201
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  208 bits (105), Expect = 2e-50
 Identities = 183/209 (87%)
 Strand = Plus / Plus

                                                                            
Query: 386      atggttactggagaggtcgaagcagttggctgtggtattggagaagccagacctctggga 445
                |||| |||| ||||| || | ||||||| ||||||| ||||||| ||| |||||||||||
Sbjct: 10821325 atggatacttgagagatcaaggcagttgtctgtggtgttggagaggccggacctctggga 10821384

                                                                            
Query: 446      ggatccagtttttgctgggaaggttagtcgtgaacaaggcgagctcatgggcaagattaa 505
                 ||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||
Sbjct: 10821385 tgatccagttttcgctgggaaggttagccgtgaacatggtgagctcatgggcaagattaa 10821444

                                                                            
Query: 506      gtcagtgaatcaattcgagcaacagttgatggagcacatcgatatgttgaggcttgcacg 565
                 |||||||| |||||||||||  |||||||||||||||| || ||||||||||||||| |
Sbjct: 10821445 atcagtgaaccaattcgagcaggagttgatggagcacattgacatgttgaggcttgcaag 10821504

                                             
Query: 566      tgacgagggtgacaatgaacttgagacgg 594
                 || ||||  || ||||||||||||||||
Sbjct: 10821505 agaagaggacgataatgaacttgagacgg 10821533



 Score =  145 bits (73), Expect = 2e-31
 Identities = 154/181 (85%)
 Strand = Plus / Plus

                                                                            
Query: 200      gccgactcggtggttctcttcgccggcgcccgtggtggaggcgccgaggacggttgacgg 259
                |||||| |||||||||||||| |||||  | |||| ||||||||||| ||| |  |||||
Sbjct: 10820916 gccgacgcggtggttctcttccccggctacggtggcggaggcgccgatgaccgcggacgg 10820975

                                                                            
Query: 260      cctgactgtcgactctattgccgacaaggggtggacgatcctcgccgatgccgagagcga 319
                 || || || ||||| || || |  |||||||||||||||||| |||| |||||||||||
Sbjct: 10820976 gctcacggtggactcgatcgcggggaaggggtggacgatcctccccgaggccgagagcga 10821035

                                                                            
Query: 320      ctggcggagccacgccgccgccgtcgcgcagtccatcaggcttattaagaagcgtctcaa 379
                |||||| ||||||||||||||||||||||||||| ||| ||| || |||||||| |||||
Sbjct: 10821036 ctggcgcagccacgccgccgccgtcgcgcagtccgtcaagctcatcaagaagcggctcaa 10821095

                 
Query: 380      g 380
                |
Sbjct: 10821096 g 10821096



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 69/77 (89%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                            
Query: 14       cgtcggagtagacgggaatggcttcccgcctcctaacc-gatcaacggccgcggtcctcg 72
                ||||||||  |||| ||||||||||||||||||||||| ||||||| ||||||  |||| 
Sbjct: 10820711 cgtcggagccgacgcgaatggcttcccgcctcctaaccagatcaaccgccgcgcgcctcc 10820770

                                 
Query: 73       tctcccacctccgctcc 89
                |||||||||||||||||
Sbjct: 10820771 tctcccacctccgctcc 10820787



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 322     ggcggagccacgccgccgccgtcgc 346
               |||||||||||||||||| ||||||
Sbjct: 9067639 ggcggagccacgccgccgtcgtcgc 9067615
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>emb|AL138823.14| Human DNA sequence from clone RP11-64J21 on chromosome 13 Contains part
              of a novel gene similar to tumour-associated hydroquinone
              (NADH) oxidase TNOX, a ribosomal protein L36 (RPL36)
              pseudogene and a CpG island, complete sequence
          Length = 175112

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 481    aaggcgagctcatgggcaagat 502
              ||||||||||||||||||||||
Sbjct: 150797 aaggcgagctcatgggcaagat 150818
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 220     cgccggcgcccgtggtggaggcgccg 245
               ||||||||||||||||| ||||||||
Sbjct: 4812706 cgccggcgcccgtggtgcaggcgccg 4812731
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 220     cgccggcgcccgtggtggaggcgccg 245
               ||||||||||||||||| ||||||||
Sbjct: 4817630 cgccggcgcccgtggtgcaggcgccg 4817655
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>gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, complete sequence
          Length = 182101

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 138    tcctccctcctgggacccactc 159
              ||||||||||||||||||||||
Sbjct: 173797 tcctccctcctgggacccactc 173776
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>gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, complete sequence
          Length = 189301

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 138   tcctccctcctgggacccactc 159
             ||||||||||||||||||||||
Sbjct: 41992 tcctccctcctgggacccactc 41971
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>ref|NM_187511.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1344

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 322 ggcggagccacgccgccgccgtcgc 346
           |||||||||||||||||| ||||||
Sbjct: 722 ggcggagccacgccgccgtcgtcgc 698
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>gb|AC091732.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0091O09, complete sequence
          Length = 123427

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   ccggcgcccgtggtggaggcg 242
             |||||||||||||||||||||
Sbjct: 39125 ccggcgcccgtggtggaggcg 39105
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>ref|XM_418516.1| PREDICTED: Gallus gallus similar to KIAA0363 (LOC420409), mRNA
          Length = 3051

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 125  tggagctgccatgtcctccct 145
            |||||||||||||||||||||
Sbjct: 1586 tggagctgccatgtcctccct 1606
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>ref|XM_584509.2| PREDICTED: Bos taurus hypothetical LOC507825 (LOC507825), mRNA
          Length = 2676

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 332  cgccgccgccgtcgcgcagtccatc 356
            ||||||||||||||||||| |||||
Sbjct: 1946 cgccgccgccgtcgcgcagcccatc 1970
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>gb|AC124213.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAa0019N10, from chromosome 10, complete sequence
          Length = 148704

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 222    ccggcgcccgtggtggaggcg 242
              |||||||||||||||||||||
Sbjct: 127829 ccggcgcccgtggtggaggcg 127809
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>gb|AC121342.6| Homo sapiens X BAC RP11-86A5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 118301

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   cacatggagctgccatgtcct 141
             |||||||||||||||||||||
Sbjct: 82629 cacatggagctgccatgtcct 82649
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>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08,
             complete sequence
          Length = 99910

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 322   ggcggagccacgccgccgccgtcgc 346
             |||||||||||||||||| ||||||
Sbjct: 76842 ggcggagccacgccgccgtcgtcgc 76818
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 222      ccggcgcccgtggtggaggcg 242
                |||||||||||||||||||||
Sbjct: 11982147 ccggcgcccgtggtggaggcg 11982127
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>gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0016G06, complete sequence
          Length = 119910

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 322   ggcggagccacgccgccgccgtcgc 346
             |||||||||||||||||| ||||||
Sbjct: 12986 ggcggagccacgccgccgtcgtcgc 12962
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>dbj|AK105994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H04, full
           insert sequence
          Length = 1735

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 322 ggcggagccacgccgccgccgtcgc 346
           |||||||||||||||||| ||||||
Sbjct: 838 ggcggagccacgccgccgtcgtcgc 814
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>dbj|AK103225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123A19, full
            insert sequence
          Length = 1990

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 322  ggcggagccacgccgccgccgtcgc 346
            |||||||||||||||||| ||||||
Sbjct: 1099 ggcggagccacgccgccgtcgtcgc 1075
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>dbj|AK102985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116C01, full
           insert sequence
          Length = 2012

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 322 ggcggagccacgccgccgccgtcgc 346
           |||||||||||||||||| ||||||
Sbjct: 742 ggcggagccacgccgccgtcgtcgc 766
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>dbj|AK101206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030P16, full
            insert sequence
          Length = 1965

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 322  ggcggagccacgccgccgccgtcgc 346
            |||||||||||||||||| ||||||
Sbjct: 1132 ggcggagccacgccgccgtcgtcgc 1108
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 222      ccggcgcccgtggtggaggcg 242
                |||||||||||||||||||||
Sbjct: 11989487 ccggcgcccgtggtggaggcg 11989467
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 161     tggcgttcctgccaccgtca 180
               ||||||||||||||||||||
Sbjct: 2331212 tggcgttcctgccaccgtca 2331231
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>gb|AY530550.1| Leucocarpus perfoliatus floricaula (FLO) mRNA, FLOB paralog,
           partial cds
          Length = 888

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 323 gcggagccacgccgccgccgtcgc 346
           ||||||| ||||||||||||||||
Sbjct: 822 gcggagcaacgccgccgccgtcgc 845
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>ref|XM_545029.1| PREDICTED: Canis familiaris similar to alpha-kinase 1 (LOC487906),
           mRNA
          Length = 3714

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 333 gccgccgccgtcgcgcagtc 352
           ||||||||||||||||||||
Sbjct: 326 gccgccgccgtcgcgcagtc 307
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 323     gcggagccacgccgccgccg 342
               ||||||||||||||||||||
Sbjct: 2417208 gcggagccacgccgccgccg 2417189
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>gb|AC163650.2| Mus musculus BAC clone RP24-383A20 from chromosome 13, complete
             sequence
          Length = 210177

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 577   acaatgaacttgagacggaa 596
             ||||||||||||||||||||
Sbjct: 64691 acaatgaacttgagacggaa 64710
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>emb|AL136128.9| Human DNA sequence from clone RP1-84N20 on chromosome 6 Contains a
             novel gene, the 5' end of the TPD52L1 gene encoding two
             variants of tumor protein D52-like 1 protein and two CpG
             islands, complete sequence
          Length = 151875

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 422   attggagaagccagacctctggga 445
             |||||||||||| |||||||||||
Sbjct: 20991 attggagaagcctgacctctggga 20968
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>emb|BX649501.24| Zebrafish DNA sequence from clone DKEY-123F20 in linkage group 5,
              complete sequence
          Length = 194220

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 500    gattaagtcagtgaatcaat 519
              ||||||||||||||||||||
Sbjct: 121815 gattaagtcagtgaatcaat 121796
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>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1065G12
          Length = 165006

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   cgccgtcgcgcagtccatca 357
             ||||||||||||||||||||
Sbjct: 64116 cgccgtcgcgcagtccatca 64097
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    gccggcgcccgtggtggagg 240
              ||||||||||||||||||||
Sbjct: 507599 gccggcgcccgtggtggagg 507580
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>emb|BX511085.16| Zebrafish DNA sequence from clone DKEY-273I10 in linkage group 22,
              complete sequence
          Length = 117103

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 500    gattaagtcagtgaatcaat 519
              ||||||||||||||||||||
Sbjct: 108010 gattaagtcagtgaatcaat 107991
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 325     ggagccacgccgccgccgtcgcgc 348
               |||||||||||| |||||||||||
Sbjct: 4324427 ggagccacgccgacgccgtcgcgc 4324450
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 338      cgccgtcgcgcagtccatca 357
                ||||||||||||||||||||
Sbjct: 39262410 cgccgtcgcgcagtccatca 39262391
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>emb|BX930474.1| Gallus gallus finished cDNA, clone ChEST628h5
          Length = 1079

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 ccacgccgccgccgtcgcgc 348
           ||||||||||||||||||||
Sbjct: 693 ccacgccgccgccgtcgcgc 712
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>dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0035F12
          Length = 153439

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    cgccgtcgcgcagtccatca 357
              ||||||||||||||||||||
Sbjct: 138170 cgccgtcgcgcagtccatca 138151
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>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0551C06
          Length = 149829

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   cgccgtcgcgcagtccatca 357
             ||||||||||||||||||||
Sbjct: 43656 cgccgtcgcgcagtccatca 43637
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>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0568D10
          Length = 63101

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 325   ggagccacgccgccgccgtcgcgc 348
             |||||||||||| |||||||||||
Sbjct: 16007 ggagccacgccgacgccgtcgcgc 16030
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>dbj|AK121605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041O06, full
           insert sequence
          Length = 758

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 338 cgccgtcgcgcagtccatca 357
           ||||||||||||||||||||
Sbjct: 180 cgccgtcgcgcagtccatca 199
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>dbj|AK070266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045G07, full
           insert sequence
          Length = 882

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 338 cgccgtcgcgcagtccatca 357
           ||||||||||||||||||||
Sbjct: 180 cgccgtcgcgcagtccatca 199
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>gb|AY106230.1| Zea mays PCO119904 mRNA sequence
          Length = 548

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 338 cgccgtcgcgcagtccatca 357
           ||||||||||||||||||||
Sbjct: 194 cgccgtcgcgcagtccatca 213
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>gb|U33216.1|SPU33216 Streptomyces phaeochromogenes SphI methyltransferase (sphIM) and
           restriction endonuclease (sphIR) genes, complete cds
          Length = 2692

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 331 acgccgccgccgtcgcgcagtcca 354
           |||||||||||||||| |||||||
Sbjct: 166 acgccgccgccgtcgcccagtcca 143


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,719,427
Number of Sequences: 3902068
Number of extensions: 4719427
Number of successful extensions: 106376
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105109
Number of HSP's gapped (non-prelim): 1259
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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