Clone Information

BLAST Search Result

Clone Name	bah62i15
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FD6E2_SOYBN (P48631) Omega-6 fatty acid desaturase, endoplasmic ...	305	6e-83
2	FAD6E_BRAJU (Q39287) Omega-6 fatty acid desaturase, endoplasmic ...	292	6e-79
3	FAD6E_ARATH (P46313) Omega-6 fatty acid desaturase, endoplasmic ...	284	2e-76
4	FD6E1_SOYBN (P48630) Omega-6 fatty acid desaturase, endoplasmic ...	281	1e-75
5	FAD12_CREAL (O81931) Delta(12) fatty acid dehydrogenase (EC 1.14...	220	3e-57
6	FAD12_MORAP (Q9Y8H5) Delta-12 fatty acid desaturase (EC 1.14.19.-)	185	1e-46
7	FAD12_MORIS (P59668) Delta-12 fatty acid desaturase (EC 1.14.19.-)	184	1e-46
8	FAD3E_TOBAC (P48626) Omega-3 fatty acid desaturase, endoplasmic ...	131	2e-30
9	FAD3E_ARATH (P48623) Omega-3 fatty acid desaturase, endoplasmic ...	129	8e-30
10	FAD3E_SOYBN (P48625) Omega-3 fatty acid desaturase, endoplasmic ...	124	2e-28
11	FAD3C_SOYBN (P48621) Omega-3 fatty acid desaturase, chloroplast ...	122	8e-28
12	FAD3E_PHAAU (P32291) Omega-3 fatty acid desaturase, endoplasmic ...	122	8e-28
13	FAD3E_BRANA (P48624) Omega-3 fatty acid desaturase, endoplasmic ...	120	3e-27
14	FAD3C_SESIN (P48620) Omega-3 fatty acid desaturase, chloroplast ...	119	7e-27
15	FAD3C_ARATH (P46310) Omega-3 fatty acid desaturase, chloroplast ...	119	7e-27
16	FAD3C_RICCO (P48619) Omega-3 fatty acid desaturase, chloroplast ...	116	6e-26
17	FAD3D_ARATH (P48622) Temperature-sensitive omega-3 fatty acid de...	115	7e-26
18	FAD3C_BRANA (P48618) Omega-3 fatty acid desaturase, chloroplast ...	115	9e-26
19	DESA_SPIPL (Q54794) Fatty acid desaturase (EC 1.14.19.-) (Delta ...	49	8e-06
20	FAD6C_SPIOL (P48629) Omega-6 fatty acid desaturase, chloroplast ...	48	2e-05
21	FAD6C_ARATH (P46312) Omega-6 fatty acid desaturase, chloroplast ...	47	4e-05
22	FAD6C_BRANA (P48627) Omega-6 fatty acid desaturase, chloroplast ...	47	4e-05
23	FAD6C_SOYBN (P48628) Omega-6 fatty acid desaturase, chloroplast ...	46	7e-05
24	DESA_SYNY3 (P20388) Fatty acid desaturase (EC 1.14.19.-) (Delta ...	44	3e-04
25	FADS_BRARE (Q9DEX7) Delta-5/delta-6 fatty acid desaturase (EC 1....	41	0.002
26	PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regula...	37	0.043
27	PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regu...	36	0.073
28	PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regula...	35	0.12
29	PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regu...	33	0.62
30	PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regu...	33	0.62
31	Y115_ADE02 (P03290) Hypothetical protein E-115	32	1.4
32	PO3F3_HUMAN (P20264) POU domain, class 3, transcription factor 3...	32	1.4
33	PO3F2_RAT (P56222) POU domain, class 3, transcription factor 2 (...	32	1.4
34	PO3F2_MOUSE (P31360) POU domain, class 3, transcription factor 2...	32	1.4
35	PO3F2_HUMAN (P20265) POU domain, class 3, transcription factor 2...	32	1.4
36	EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-...	31	2.3
37	GP124_HUMAN (Q96PE1) Probable G-protein coupled receptor 124 pre...	31	2.3
38	PA_THOGV (P27194) Polymerase acidic protein (RNA-directed RNA po...	31	2.3
39	SYT3_MOUSE (O35681) Synaptotagmin-3 (Synaptotagmin III) (SytIII)	31	3.1
40	HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor	30	4.0
41	HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHR...	30	4.0
42	AROE_XANCP (Q8P3W6) Shikimate dehydrogenase (EC 1.1.1.25)	30	4.0
43	SYA_STRT2 (Q5M5L5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	30	4.0
44	SYA_STRT1 (Q5M126) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	30	4.0
45	HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor (Histid...	30	4.0
46	RL3_LEPIN (Q9XD36) 50S ribosomal protein L3	30	5.2
47	RL3_LEPIC (Q72NG1) 50S ribosomal protein L3	30	5.2
48	PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regu...	30	6.8
49	PO3F3_RAT (Q63262) POU domain, class 3, transcription factor 3 (...	30	6.8
50	Y691_RICPR (Q9ZCN2) Hypothetical protein RP691	30	6.8
51	PO3F3_MOUSE (P31361) POU domain, class 3, transcription factor 3...	30	6.8
52	TRMU2_THETN (Q8R7F0) Probable tRNA (5-methylaminomethyl-2-thiour...	30	6.8
53	RM09_YEAST (P31334) 60S ribosomal protein L9, mitochondrial prec...	30	6.8
54	SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dep...	29	8.9
55	Y307_RHOPA (P61415) UPF0314 protein RPA0307	29	8.9
56	LLCD_SYNY3 (Q08871) Linoleoyl-CoA desaturase (EC 1.14.19.3) (Del...	29	8.9
57	SYT3_HUMAN (Q9BQG1) Synaptotagmin-3 (Synaptotagmin III) (SytIII)	29	8.9
58	KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C...	29	8.9
59	FAD5_MORAP (O74212) Delta-5 fatty acid desaturase (EC 1.14.19.-)	29	8.9
60	GP124_MOUSE (Q91ZV8) Probable G-protein coupled receptor 124 pre...	29	8.9

>FD6E2_SOYBN (P48631) Omega-6 fatty acid desaturase, endoplasmic reticulum|
           isozyme 2 (EC 1.14.19.-)
          Length = 383

 Score =  305 bits (781), Expect = 6e-83
 Identities = 142/192 (73%), Positives = 157/192 (81%)
 Frame = +1

Query: 16  YTPYIYNNPIGRLVHIVVQLTLGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIF 195
           Y+ Y+ NNP GR++ + V LTLGWPLYLALN SGRPY RFACH+DPYGPIY+DRER QI+
Sbjct: 168 YSKYL-NNPPGRVLTLAVTLTLGWPLYLALNVSGRPYDRFACHYDPYGPIYSDRERLQIY 226

Query: 196 ISDVGXXXXXXXXXXXXXXFGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSTE 375
           ISD G               G  WVV VYGVPLL+VN +LVLIT+LQHTHPALPHY S+E
Sbjct: 227 ISDAGVLAVVYGLFRLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYTSSE 286

Query: 376 WDWLRGALATMDRDYGILNRVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQF 555
           WDWLRGALAT+DRDYGILN+VFHNITDTHVAHHLFS MPHYHAMEATKAIKPILGEYY+F
Sbjct: 287 WDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRF 346

Query: 556 DGTPVAKATWRE 591
           D TP  KA WRE
Sbjct: 347 DETPFVKAMWRE 358

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>FAD6E_BRAJU (Q39287) Omega-6 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-) (Delta-12 desaturase)
          Length = 384

 Score =  292 bits (747), Expect = 6e-79
 Identities = 139/193 (72%), Positives = 152/193 (78%), Gaps = 1/193 (0%)
 Frame = +1

Query: 16  YTPYIYNNPIGRLVHIVVQLTLGWPLYLALNASGRPYPR-FACHFDPYGPIYNDRERAQI 192
           Y  Y+ NNP+GR V + VQ TLGWPLY A N SGRPYP  FACHF P  PIYNDRER QI
Sbjct: 168 YGKYL-NNPLGRTVMLTVQFTLGWPLYWAFNVSGRPYPEGFACHFHPNAPIYNDRERLQI 226

Query: 193 FISDVGXXXXXXXXXXXXXXFGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDST 372
           ++SD G               G   +V +YGVPLLIVNA+LVLITYLQHTHP+LPHYDS+
Sbjct: 227 YVSDAGILAVCYGLYRYAAAQGVASMVCLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSS 286

Query: 373 EWDWLRGALATMDRDYGILNRVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQ 552
           EWDWLRGALAT+DRDYGILN+VFHNITDTHVAHHLFS MPHYHAME TKAIKPILG+YYQ
Sbjct: 287 EWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEVTKAIKPILGDYYQ 346

Query: 553 FDGTPVAKATWRE 591
           FDGTP  KA WRE
Sbjct: 347 FDGTPWVKAMWRE 359

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>FAD6E_ARATH (P46313) Omega-6 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-) (Delta-12 desaturase)
          Length = 383

 Score =  284 bits (726), Expect = 2e-76
 Identities = 134/192 (69%), Positives = 152/192 (79%)
 Frame = +1

Query: 16  YTPYIYNNPIGRLVHIVVQLTLGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIF 195
           Y  Y+ NNP+GR++ + VQ  LGWPLYLA N SGRPY  FACHF P  PIYNDRER QI+
Sbjct: 168 YGKYL-NNPLGRIMMLTVQFVLGWPLYLAFNVSGRPYDGFACHFFPNAPIYNDRERLQIY 226

Query: 196 ISDVGXXXXXXXXXXXXXXFGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSTE 375
           +SD G               G   ++ +YGVPLLIVNA+LVLITYLQHTHP+LPHYDS+E
Sbjct: 227 LSDAGILAVCFGLYRYAAAQGMASMICLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSE 286

Query: 376 WDWLRGALATMDRDYGILNRVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQF 555
           WDWLRGALAT+DRDYGILN+VFHNITDTHVAHHLFS MPHY+AMEATKAIKPILG+YYQF
Sbjct: 287 WDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILGDYYQF 346

Query: 556 DGTPVAKATWRE 591
           DGTP   A +RE
Sbjct: 347 DGTPWYVAMYRE 358

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>FD6E1_SOYBN (P48630) Omega-6 fatty acid desaturase, endoplasmic reticulum|
           isozyme 1 (EC 1.14.19.-)
          Length = 387

 Score =  281 bits (719), Expect = 1e-75
 Identities = 129/186 (69%), Positives = 146/186 (78%)
 Frame = +1

Query: 34  NNPIGRLVHIVVQLTLGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDVGX 213
           NNP+GR V ++V LT+GWP+YLA N SGRPY  FA H+ PY PIY++RER  I++SDV  
Sbjct: 177 NNPLGRAVSLLVTLTIGWPMYLAFNVSGRPYDSFASHYHPYAPIYSNRERLLIYVSDVAL 236

Query: 214 XXXXXXXXXXXXXFGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSTEWDWLRG 393
                         G  W++ VYGVPLLIVN +LV ITYLQHTH ALPHYDS+EWDWL+G
Sbjct: 237 FSVTYSLYRVATLKGLVWLLCVYGVPLLIVNGFLVTITYLQHTHFALPHYDSSEWDWLKG 296

Query: 394 ALATMDRDYGILNRVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQFDGTPVA 573
           ALATMDRDYGILN+VFH+ITDTHVAHHLFS MPHYHAMEAT AIKPILGEYYQFD TP  
Sbjct: 297 ALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHAMEATNAIKPILGEYYQFDDTPFY 356

Query: 574 KATWRE 591
           KA WRE
Sbjct: 357 KALWRE 362

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>FAD12_CREAL (O81931) Delta(12) fatty acid dehydrogenase (EC 1.14.99.33)|
           (Crepenynate synthase) (Delta-12 fatty acid acetylenase)
          Length = 375

 Score =  220 bits (560), Expect = 3e-57
 Identities = 99/188 (52%), Positives = 130/188 (69%)
 Frame = +1

Query: 28  IYNNPIGRLVHIVVQLTLGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDV 207
           + N+P GRL+ + +  TLG+PLYL  N SG+ Y RFA HFDP  PI+ +RER Q+ +SD+
Sbjct: 164 VLNHPPGRLLIMFITFTLGFPLYLFTNISGKKYERFANHFDPMSPIFKERERFQVLLSDL 223

Query: 208 GXXXXXXXXXXXXXXFGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSTEWDWL 387
           G               G  WV  +YG+P+L V  +  +ITYL HTH +LPHYDS+EW+WL
Sbjct: 224 GLLAVLYGVKLAVAAKGAAWVTCIYGIPVLGVFIFFDIITYLHHTHLSLPHYDSSEWNWL 283

Query: 388 RGALATMDRDYGILNRVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQFDGTP 567
           RGAL+T+DRD+G LN V H++T THV HHLFS +PHYHA EA  AI  +LG++Y+ D TP
Sbjct: 284 RGALSTIDRDFGFLNSVLHDVTHTHVMHHLFSYIPHYHAKEARDAINTVLGDFYKIDRTP 343

Query: 568 VAKATWRE 591
           + KA WRE
Sbjct: 344 ILKAMWRE 351

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>FAD12_MORAP (Q9Y8H5) Delta-12 fatty acid desaturase (EC 1.14.19.-)|
          Length = 400

 Score =  185 bits (469), Expect = 1e-46
 Identities = 90/184 (48%), Positives = 110/184 (59%), Gaps = 1/184 (0%)
 Frame = +1

Query: 40  PIGRLVHIVVQLTLGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDVGXXX 219
           PI  L  +V+Q   GWP YL +NASG+ Y R+  HF  Y PI+  R    I ISD+G   
Sbjct: 198 PIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLA 257

Query: 220 XXXXXXXXXXXFGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSTEWDWLRGAL 399
                           V + Y VP L VN WLVLIT+LQHT P LPHY    W++ RGAL
Sbjct: 258 ALGALIYASMQLSLLTVTKYYIVPYLFVNFWLVLITFLQHTDPKLPHYREGAWNFQRGAL 317

Query: 400 ATMDRDYG-ILNRVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQFDGTPVAK 576
            T+DR +G  L+ +FH I  THVAHHLFS MP YHA EAT  +K +LGEYY +D +P+  
Sbjct: 318 CTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVYDPSPIVV 377

Query: 577 ATWR 588
           A WR
Sbjct: 378 AVWR 381

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>FAD12_MORIS (P59668) Delta-12 fatty acid desaturase (EC 1.14.19.-)|
          Length = 400

 Score =  184 bits (468), Expect = 1e-46
 Identities = 89/184 (48%), Positives = 110/184 (59%), Gaps = 1/184 (0%)
 Frame = +1

Query: 40  PIGRLVHIVVQLTLGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDVGXXX 219
           PI  L  +V+Q   GWP YL +NASG+ Y R+  HF  Y PI+  R    I ISD+G   
Sbjct: 198 PIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLA 257

Query: 220 XXXXXXXXXXXFGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSTEWDWLRGAL 399
                           V + Y +P L VN WLVLIT+LQHT P LPHY    W++ RGAL
Sbjct: 258 ALGALIYASMQLSLLTVTKYYIIPYLFVNFWLVLITFLQHTDPKLPHYREGAWNFQRGAL 317

Query: 400 ATMDRDYG-ILNRVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQFDGTPVAK 576
            T+DR +G  L+ +FH I  THVAHHLFS MP YHA EAT  +K +LGEYY +D +P+  
Sbjct: 318 CTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVYDPSPIVV 377

Query: 577 ATWR 588
           A WR
Sbjct: 378 AVWR 381

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>FAD3E_TOBAC (P48626) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-)
          Length = 379

 Score =  131 bits (329), Expect = 2e-30
 Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
 Frame = +1

Query: 79  LGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDVGXXXXXXXXXXXXXXFG 258
           L +P+YL   + G+       HF+PY  ++   ER  +  S +               FG
Sbjct: 176 LAYPMYLMKRSPGKS----GSHFNPYSDLFQPHERKYVVTSTLCWTVMAALLLYLCTAFG 231

Query: 259 FWWVVRVYGVPLLIVNAWLVLITYLQHT--HPALPHYDSTEWDWLRGALATMDRDYGILN 432
              + ++YG P LI   WL  +TYL H      LP Y   EW +LRG L T+DRDYG+ N
Sbjct: 232 SLQMFKIYGAPYLIFVMWLDFVTYLHHHGYEKKLPWYRGKEWSYLRGGLTTVDRDYGLFN 291

Query: 433 RVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQ 552
            + H+I  THV HHLF  +PHYH  EATKA KP+LG+YY+
Sbjct: 292 NIHHDI-GTHVIHHLFPQIPHYHLREATKAAKPVLGKYYR 330

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>FAD3E_ARATH (P48623) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-)
          Length = 386

 Score =  129 bits (323), Expect = 8e-30
 Identities = 71/171 (41%), Positives = 92/171 (53%), Gaps = 3/171 (1%)
 Frame = +1

Query: 49  RLVHIVVQLT-LGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDVGXXXXX 225
           R++   V L  L +PLYL   + G+       HF+PY  ++   ER  I  S        
Sbjct: 169 RMLRYTVPLPMLAYPLYLCYRSPGKE----GSHFNPYSSLFAPSERKLIATSTTCWSIMF 224

Query: 226 XXXXXXXXXFGFWWVVRVYGVPLLIVNAWLVLITYLQHT--HPALPHYDSTEWDWLRGAL 399
                    FG   V++VYGVP +I   WL  +TYL H      LP Y   EW +LRG L
Sbjct: 225 VSLIALSFVFGPLAVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGL 284

Query: 400 ATMDRDYGILNRVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQ 552
            T+DRDYGI N + H+I  THV HHLF  +PHYH ++ATKA K +LG YY+
Sbjct: 285 TTIDRDYGIFNNIHHDI-GTHVIHHLFPQIPHYHLVDATKAAKHVLGRYYR 334

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>FAD3E_SOYBN (P48625) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-)
          Length = 380

 Score =  124 bits (311), Expect = 2e-28
 Identities = 71/183 (38%), Positives = 97/183 (53%), Gaps = 5/183 (2%)
 Frame = +1

Query: 19  TPYIYNN--PIGRLVHIVVQLTLG-WPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQ 189
           T  IY N   + RL+   V   L  +P+YL   + G+       HF+PY  ++   ER  
Sbjct: 156 TEKIYKNLDSMTRLIRFTVPFPLFVYPIYLFSRSPGKE----GSHFNPYSNLFPPSERKG 211

Query: 190 IFISDVGXXXXXXXXXXXXXXFGFWWVVRVYGVPLLIVNAWLVLITYLQHT--HPALPHY 363
           I IS +                    V+++YG+P  I   WL  +TYL H   H  LP Y
Sbjct: 212 IAISTLCWATMFSLLIYLSFITSPLLVLKLYGIPYWIFVMWLDFVTYLHHHGHHQKLPWY 271

Query: 364 DSTEWDWLRGALATMDRDYGILNRVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGE 543
              EW +LRG L T+DRDYG +  + H+I  THV HHLF  +PHYH +EAT+A KP+LG+
Sbjct: 272 RGKEWSYLRGGLTTVDRDYGWIYNIHHDI-GTHVIHHLFPQIPHYHLVEATQAAKPVLGD 330

Query: 544 YYQ 552
           YY+
Sbjct: 331 YYR 333

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>FAD3C_SOYBN (P48621) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 453

 Score =  122 bits (306), Expect = 8e-28
 Identities = 63/160 (39%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
 Frame = +1

Query: 79  LGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDVGXXXXXXXXXXXXXXFG 258
           L +P+YL   + G+       HFDP   ++   ER  +  S                  G
Sbjct: 250 LAFPVYLFSRSPGKT----GSHFDPSSDLFVPNERKDVITSTACWAAMLGLLVGLGFVMG 305

Query: 259 FWWVVRVYGVPLLIVNAWLVLITYLQHT--HPALPHYDSTEWDWLRGALATMDRDYGILN 432
              ++++YGVP +I   WL L+TYL H      LP Y   EW +LRG L T+DRDYG +N
Sbjct: 306 PIQLLKLYGVPYVIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWIN 365

Query: 433 RVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQ 552
            + H+I  THV HHLF  +PHYH +EAT+A KP+ G+YY+
Sbjct: 366 NIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVFGKYYR 404

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>FAD3E_PHAAU (P32291) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-) (Indole-3-acetic acid-induced protein ARG1)
          Length = 380

 Score =  122 bits (306), Expect = 8e-28
 Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 3/159 (1%)
 Frame = +1

Query: 85  WPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDVGXXXXXXXXXXXXXXFGFW 264
           +P YL   + G+       HF+PY  +++  ER  +  S +                G  
Sbjct: 178 YPFYLWNRSPGKE----GSHFNPYSNLFSPGERKGVVTSTLCWGIVLSVLLYLSLTIGPI 233

Query: 265 WVVRVYGVPLLIVNAWLVLITYLQH---THPALPHYDSTEWDWLRGALATMDRDYGILNR 435
           +++++YGVP LI   WL  +TYL H   TH  LP Y   EW +LRG L T+DRDYG +N 
Sbjct: 234 FMLKLYGVPYLIFVMWLDFVTYLHHHGYTHK-LPWYRGQEWSYLRGGLTTVDRDYGWINN 292

Query: 436 VFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQ 552
           V H+I  THV HHLF  +PHYH +EATK+ K +LG+YY+
Sbjct: 293 VHHDI-GTHVIHHLFPQIPHYHLVEATKSAKSVLGKYYR 330

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>FAD3E_BRANA (P48624) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC|
           1.14.19.-)
          Length = 383

 Score =  120 bits (301), Expect = 3e-27
 Identities = 67/171 (39%), Positives = 90/171 (52%), Gaps = 3/171 (1%)
 Frame = +1

Query: 49  RLVHIVVQLT-LGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDVGXXXXX 225
           R++   V L  L +P+YL   + G+       HF+PY  ++   ER  I  S        
Sbjct: 166 RMLRYTVPLPMLAYPIYLWYRSPGKE----GSHFNPYSSLFAPSERKLIATSTTCWSIML 221

Query: 226 XXXXXXXXXFGFWWVVRVYGVPLLIVNAWLVLITYLQHT--HPALPHYDSTEWDWLRGAL 399
                         V++VYGVP +I   WL  +TYL H      LP Y   EW +LRG L
Sbjct: 222 ATLVYLSFLVDPVTVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGL 281

Query: 400 ATMDRDYGILNRVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQ 552
            T+DRDYGI N + H+I  THV HHLF  +PHYH ++AT+A K +LG YY+
Sbjct: 282 TTIDRDYGIFNNIHHDI-GTHVIHHLFPQIPHYHLVDATRAAKHVLGRYYR 331

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>FAD3C_SESIN (P48620) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 447

 Score =  119 bits (298), Expect = 7e-27
 Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
 Frame = +1

Query: 79  LGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDVGXXXXXXXXXXXXXXFG 258
           L +P+YL   + G+       HF P   ++   E+  +  S V                G
Sbjct: 246 LAYPIYLWSRSPGKQ----GSHFHPDSDLFVPNEKKDVITSTVCWTAMLALLVGLSFVIG 301

Query: 259 FWWVVRVYGVPLLIVNAWLVLITYLQHT--HPALPHYDSTEWDWLRGALATMDRDYGILN 432
              ++++YG+P L    WL L+TYL H      LP Y   EW +LRG L T+DRDYG +N
Sbjct: 302 PVQLLKLYGIPYLGNVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWIN 361

Query: 433 RVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQ 552
            + H+I  THV HHLF  +PHYH +EAT+A KP+LG+YY+
Sbjct: 362 NIHHDI-GTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYR 400

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>FAD3C_ARATH (P46310) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 446

 Score =  119 bits (298), Expect = 7e-27
 Identities = 60/160 (37%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
 Frame = +1

Query: 79  LGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDVGXXXXXXXXXXXXXXFG 258
           L +P YL   + G+       H+ P   ++  +ER  +  S                  G
Sbjct: 242 LAYPFYLWARSPGKK----GSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIG 297

Query: 259 FWWVVRVYGVPLLIVNAWLVLITYLQHT--HPALPHYDSTEWDWLRGALATMDRDYGILN 432
              ++++YG+P  I   WL  +TYL H      LP Y   EW +LRG L T+DRDYG++N
Sbjct: 298 PIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLIN 357

Query: 433 RVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQ 552
            + H+I  THV HHLF  +PHYH +EAT+A KP+LG+YY+
Sbjct: 358 NIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 396

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>FAD3C_RICCO (P48619) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 460

 Score =  116 bits (290), Expect = 6e-26
 Identities = 60/160 (37%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
 Frame = +1

Query: 79  LGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDVGXXXXXXXXXXXXXXFG 258
           L +P YL   + G+       HF P   ++  +ER  I  S                  G
Sbjct: 256 LAYPFYLWSRSPGKK----GSHFHPDSGLFVPKERKDIITSTACWTAMAALLVYLNFSMG 311

Query: 259 FWWVVRVYGVPLLIVNAWLVLITYLQHT--HPALPHYDSTEWDWLRGALATMDRDYGILN 432
              ++++YG+P  I   WL  +TYL H      LP Y    W +LRG L T+DRDYG +N
Sbjct: 312 PVQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWSYLRGGLTTLDRDYGWIN 371

Query: 433 RVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQ 552
            + H+I  THV HHLF  +PHYH +EAT+A KP++G+YY+
Sbjct: 372 NIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVMGKYYR 410

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>FAD3D_ARATH (P48622) Temperature-sensitive omega-3 fatty acid desaturase,|
           chloroplast precursor (EC 1.14.19.-)
          Length = 435

 Score =  115 bits (289), Expect = 7e-26
 Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
 Frame = +1

Query: 79  LGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDVGXXXXXXXXXXXXXXFG 258
           L +P YL   + G+       H+ P   ++  +E+  +  S                  G
Sbjct: 235 LAYPFYLWNRSPGKQ----GSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFVMG 290

Query: 259 FWWVVRVYGVPLLIVNAWLVLITYLQHT--HPALPHYDSTEWDWLRGALATMDRDYGILN 432
              ++++YG+P  I   WL  +TYL H      LP Y   EW +LRG L T+DRDYG +N
Sbjct: 291 PIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWIN 350

Query: 433 RVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQ 552
            + H+I  THV HHLF  +PHYH +EAT+A KP+LG+YY+
Sbjct: 351 NIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 389

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>FAD3C_BRANA (P48618) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-) (Fragment)
          Length = 404

 Score =  115 bits (288), Expect = 9e-26
 Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
 Frame = +1

Query: 79  LGWPLYLALNASGRPYPRFACHFDPYGPIYNDRERAQIFISDVGXXXXXXXXXXXXXXFG 258
           L +P YL   + G+       H+ P   ++  +ER  +  S                  G
Sbjct: 200 LAYPFYLWARSPGKK----GSHYHPDSDLFLPKERNDVLTSTACWTAMAVLLVCLNFVMG 255

Query: 259 FWWVVRVYGVPLLIVNAWLVLITYLQHT--HPALPHYDSTEWDWLRGALATMDRDYGILN 432
              ++++Y +P  I   WL  +TYL H      LP Y   EW +LRG L T+DRDYG++N
Sbjct: 256 PMQMLKLYVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLIN 315

Query: 433 RVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQ 552
            + H+I  THV HHLF  +PHYH +EAT+A KP+LG+YY+
Sbjct: 316 NIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 354

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>DESA_SPIPL (Q54794) Fatty acid desaturase (EC 1.14.19.-) (Delta 12 desaturase)|
          Length = 351

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
 Frame = +1

Query: 256 GFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSTEWDWLRGALA-TMDRDYGILN 432
           G W  V+ + +P L+ + W+   T L HT   +P  +  +W      L+ T+  +Y    
Sbjct: 217 GVWGFVKFWVIPWLVFHFWMSTFTLLHHTIADIPFREPEQWHEAESQLSGTVHCNYSRWG 276

Query: 433 RVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEY 546
               +  + H+ HH+ + +P Y+    T   + I GEY
Sbjct: 277 EFLCHDINVHIPHHVTTAIPWYNLRTPTPVYRKIGGEY 314

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>FAD6C_SPIOL (P48629) Omega-6 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 447

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
 Frame = +1

Query: 271 VRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSTEWDWLRGALA-TMDRDYGILNRVFHN 447
           ++ + +P L  + W+   T + HT P +P   S EW+  +  L+ T+  DY     +  +
Sbjct: 303 IKFWLMPWLGYHFWMSTFTIVHHTAPHIPFKSSKEWNAAQAQLSGTVHCDYPRWIEILCH 362

Query: 448 ITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQFDGTPVAKATWR 588
               H+ HH+   +P Y+   A +++    GEY         K+ WR
Sbjct: 363 DISVHIPHHISPKIPSYNLRAANQSLNENWGEYLN-----KPKSNWR 404

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>FAD6C_ARATH (P46312) Omega-6 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 448

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
 Frame = +1

Query: 271 VRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSTEWDWLRGAL-ATMDRDYGILNRVFHN 447
           V+ + +P L  + W+   T + HT P +P   + EW+  +  L  T+  DY     +  +
Sbjct: 303 VKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCH 362

Query: 448 ITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQFDGTPVAKATWR 588
             + H+ HH+   +P Y+   A ++I+   G+Y     T +A   WR
Sbjct: 363 DINVHIPHHISPRIPSYNLRAAHESIQENWGKY-----TNLATWNWR 404

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>FAD6C_BRANA (P48627) Omega-6 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 443

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
 Frame = +1

Query: 271 VRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSTEWDWLRGAL-ATMDRDYGILNRVFHN 447
           V+ + +P L  + W+   T + HT P +P   + EW+  +  L  T+  DY     +  +
Sbjct: 298 VKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCH 357

Query: 448 ITDTHVAHHLFSNMPHYHAMEATKAIKPILGEYYQFDGTPVAKATWR 588
             + H+ HH+   +P Y+   A ++I+   G+Y     T +A   WR
Sbjct: 358 DINVHIPHHISPRIPSYNLRAAHQSIQENWGKY-----TNLATWNWR 399

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>FAD6C_SOYBN (P48628) Omega-6 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-)
          Length = 424

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
 Frame = +1

Query: 271 VRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSTEWDWLRGAL-ATMDRDYGILNRVFHN 447
           ++ + +P L  + W+   T + HT P +P   S EW+  +  L  T+  DY     +  +
Sbjct: 297 IKFWLMPWLGYHFWMSTFTMVHHTAPYIPFKYSEEWNRAQAQLNGTVHCDYPKWIEILCH 356

Query: 448 ITDTHVAHHLFSNMPHYHAMEATKAIKPILGEY 546
             + H+ HH+   +P Y+   A K+++   G+Y
Sbjct: 357 DINVHIPHHISPRIPSYNLRAAHKSLQENWGQY 389

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>DESA_SYNY3 (P20388) Fatty acid desaturase (EC 1.14.19.-) (Delta 12 desaturase)|
          Length = 351

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
 Frame = +1

Query: 256 GFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSTEWDWLRGAL-ATMDRDYGILN 432
           G W  V+ + +P L+ + W+   T + HT P +    + +W      L  T+  DY    
Sbjct: 218 GVWGFVKFWLMPWLVYHFWMSTFTIVHHTIPEIRFRPAADWSAAEAQLNGTVHCDYPRWV 277

Query: 433 RVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEY 546
            V  +  + H+ HHL   +P Y+   A  ++K   G +
Sbjct: 278 EVLCHDINVHIPHHLSVAIPSYNLRLAHGSLKENWGPF 315

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>FADS_BRARE (Q9DEX7) Delta-5/delta-6 fatty acid desaturase (EC 1.14.19.-)|
          Length = 444

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
 Frame = +1

Query: 253 FGFWWVVRVYGVPLLIVNAWLVLITYLQHTHPALPHYDSTEWDWLRGAL-ATMDRDYGIL 429
           +G +W + ++     + + W V +T + H  P    Y+  + DWL   L AT + +    
Sbjct: 314 YGVFWAIILFNFVRFMESHWFVWVTQMSHI-PMNIDYEKNQ-DWLSMQLVATCNIEQSAF 371

Query: 430 NRVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPILGEY 546
           N  F    +  + HHLF  +P ++   A   ++ +  +Y
Sbjct: 372 NDWFSGHLNFQIEHHLFPTVPRHNYWRAAPRVRALCEKY 410

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>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (PNUTS
           protein) (MHC class I region proline-rich protein CAT53)
          Length = 872

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 11/65 (16%)
 Frame = +3

Query: 372 GVGLAAGGARHHGPGLRHSQPR------VPQHHGHARGAPPLLQHAALPRHG-----GHQ 518
           G  + +G   H GPG  H  P       VP H GH    PP  +H     HG     GH 
Sbjct: 772 GGSMGSGHRSHEGPG--HGGPHGHRPHDVPSHRGHDHRGPPPHEHRGHDGHGGGGHRGHD 829

Query: 519 GDQAH 533
           G  +H
Sbjct: 830 GGHSH 834

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>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 888

 Score = 36.2 bits (82), Expect = 0.073
 Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 11/64 (17%)
 Frame = +3

Query: 375 VGLAAGGARHHGPGLRHSQPR------VPQHHGHARGAPPLLQHAALPRHG-----GHQG 521
           +G + G   H GPG  H  P       VP H GH    PP  +H     HG     GH G
Sbjct: 789 MGGSGGHRSHEGPG--HGGPHGHRPHDVPSHRGHDHRGPPPHEHRGHDGHGGGGHRGHDG 846

Query: 522 DQAH 533
             +H
Sbjct: 847 GHSH 850

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>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53) (Protein
            FB19)
          Length = 925

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 26/69 (37%), Positives = 28/69 (40%), Gaps = 15/69 (21%)
 Frame = +3

Query: 372  GVGLAAGGAR--HHGPGLRHSQPR------VPQHHGHARGAPPLLQHAAL--PRHG---- 509
            G G+ AGG    H GPG  H  P       VP H GH    PP  +H     P HG    
Sbjct: 821  GGGMGAGGGHRPHEGPG--HGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGH 878

Query: 510  -GHQGDQAH 533
             GH G   H
Sbjct: 879  RGHDGGHNH 887

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>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53) (Protein
            FB19)
          Length = 940

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
 Frame = +3

Query: 375  VGLAAGGARHHGPGLRHSQPR------VPQHHGHARGAPPLLQHAAL--PRHG-----GH 515
            +G + G   H GPG  H  P       VP H GH    PP  +H     P HG     GH
Sbjct: 839  MGGSGGHRPHEGPG--HGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGH 896

Query: 516  QGDQAH 533
             G  +H
Sbjct: 897  DGGHSH 902

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>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (Phosphatase 1 nuclear targeting subunit) (MHC class I
            region proline-rich protein CAT53) (FB19 protein)
            (PP1-binding protein of 114 kDa) (p99)
          Length = 940

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
 Frame = +3

Query: 375  VGLAAGGARHHGPGLRHSQPR------VPQHHGHARGAPPLLQHAAL--PRHG-----GH 515
            +G + G   H GPG  H  P       VP H GH    PP  +H     P HG     GH
Sbjct: 839  MGGSGGHRPHEGPG--HGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHRGH 896

Query: 516  QGDQAH 533
             G  +H
Sbjct: 897  DGGHSH 902

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>Y115_ADE02 (P03290) Hypothetical protein E-115|
          Length = 115

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
 Frame = -1

Query: 592 PRAMWPWRPGCRQTGSTRRGWA*SPW----WPPWR---GSAA 488
           PRA  P R  C    + RRGW  +PW    WP  R   GSA+
Sbjct: 52  PRAAPPPRASCAPRATPRRGWTMTPWSNATWPTRRAKTGSAS 93

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>PO3F3_HUMAN (P20264) POU domain, class 3, transcription factor 3|
           (Brain-specific homeobox/POU domain protein 1) (Brain-1)
           (Brn-1 protein)
          Length = 500

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 25/61 (40%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
 Frame = +3

Query: 372 GVGLAAGGARHH-GPGL-RHSQPRVPQHHGH----ARGAPPLLQHAALPRHGGHQGDQAH 533
           G G A GGA+    PGL R   P + +HH H    A   PP   HA  P H G  G  A 
Sbjct: 243 GGGGAGGGAQSLVHPGLVRGDTPELAEHHHHHHHHAHPHPPHPHHAQGPPHHGGGGGGAG 302

Query: 534 P 536
           P
Sbjct: 303 P 303

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>PO3F2_RAT (P56222) POU domain, class 3, transcription factor 2 (Nervous|
           system-specific octamer-binding transcription factor
           N-Oct-3) (Brain-specific homeobox/POU domain protein 2)
           (Brain-2) (Protein Brn-2)
          Length = 445

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 18/55 (32%), Positives = 19/55 (34%)
 Frame = +3

Query: 372 GVGLAAGGARHHGPGLRHSQPRVPQHHGHARGAPPLLQHAALPRHGGHQGDQAHP 536
           G G    G  HHG    H +P    HH H    P    H   P     QG   HP
Sbjct: 204 GAGGQPAGLHHHGLRDAHDEPHHADHHPHPHSHP----HQQPPPPPPPQGPPGHP 254

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>PO3F2_MOUSE (P31360) POU domain, class 3, transcription factor 2 (Nervous|
           system-specific octamer-binding transcription factor
           N-Oct-3) (Brain-specific homeobox/POU domain protein 2)
           (Brain-2) (Protein Brn-2)
          Length = 445

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 18/55 (32%), Positives = 19/55 (34%)
 Frame = +3

Query: 372 GVGLAAGGARHHGPGLRHSQPRVPQHHGHARGAPPLLQHAALPRHGGHQGDQAHP 536
           G G    G  HHG    H +P    HH H    P    H   P     QG   HP
Sbjct: 204 GAGGQPAGLHHHGLRDAHDEPHHADHHPHPHSHP----HQQPPPPPPPQGPPGHP 254

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>PO3F2_HUMAN (P20265) POU domain, class 3, transcription factor 2 (Nervous|
           system-specific octamer-binding transcription factor
           N-Oct-3) (Brain-specific homeobox/POU domain protein 2)
           (Brain-2) (Protein Brn-2)
          Length = 443

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 18/55 (32%), Positives = 19/55 (34%)
 Frame = +3

Query: 372 GVGLAAGGARHHGPGLRHSQPRVPQHHGHARGAPPLLQHAALPRHGGHQGDQAHP 536
           G G    G  HHG    H +P    HH H    P    H   P     QG   HP
Sbjct: 202 GAGGQPAGLHHHGLRDAHDEPHHADHHPHPHSHP----HQQPPPPPPPQGPPGHP 252

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>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)|
           (Ath-ExpAlpha-1.19)
          Length = 312

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 25/61 (40%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +3

Query: 405 HGPGLRHSQPRVPQHHGH-ARGAPPLLQHAALPRHGGHQGDQAHPRR-VLPV*RHPGRQG 578
           H PG R      P H  H A GA P   H A P HG H    AHP    LP   H G+  
Sbjct: 33  HVPGGRPGAH--PSHGAHPAHGAHP--SHGAHPSHGAHPSHGAHPSHGALP--SHGGQVP 86

Query: 579 H 581
           H
Sbjct: 87  H 87

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>GP124_HUMAN (Q96PE1) Probable G-protein coupled receptor 124 precursor (Tumor|
           endothelial marker 5)
          Length = 1331

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +3

Query: 387 AGGARHHGPGLRHSQPRVPQHH-GHARGAPPLLQHAALPRHGGHQGDQAHP 536
           AGG    G  LR SQP V   H  H      L++ +A PR  G  G   HP
Sbjct: 714 AGGWTSEGCQLRSSQPNVSALHCQHLGNVAVLMELSAFPREVGGAGAGLHP 764

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>PA_THOGV (P27194) Polymerase acidic protein (RNA-directed RNA polymerase|
           subunit P3)
          Length = 622

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = +1

Query: 265 WVVRVYGVPLLIVNAWLVLITYL---QHTHPALPHYDSTEW 378
           W+ +V+G    +V  W   I  L    HTH   P YD  +W
Sbjct: 22  WITQVHGHVRRVVECWKYTICCLISNMHTHRGAPQYDVFKW 62

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>SYT3_MOUSE (O35681) Synaptotagmin-3 (Synaptotagmin III) (SytIII)|
          Length = 587

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
 Frame = +3

Query: 378 GLAAGGARHHGPGLR-HSQPRVPQHHGHARGAPPLLQHAALPRHGGHQGDQ 527
           GL  GG  H G  L  H     P HHGH    PP    A L   GG  G +
Sbjct: 109 GLVGGGGHHLGASLGGHPLLGGPHHHGHTAHHPPF---AELLEPGGLGGSE 156

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>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 15/44 (34%), Positives = 15/44 (34%)
 Frame = +3

Query: 402 HHGPGLRHSQPRVPQHHGHARGAPPLLQHAALPRHGGHQGDQAH 533
           HH P   H     P HH H   AP    H     H GH     H
Sbjct: 191 HHAPHHHHHHHHAPHHHHHHHHAPHHHHH----HHHGHHHHHHH 230



 Score = 30.0 bits (66), Expect = 5.2
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = +3

Query: 402 HHGPGLRHSQPRVPQHHGHARGAPPLLQHAALPRHGGHQGDQAH 533
           HH P   H     P HH H   AP    H     H  H     H
Sbjct: 181 HHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGH 224



 Score = 29.6 bits (65), Expect = 6.8
 Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
 Frame = +3

Query: 390 GGARHHGPGLRHSQPRVPQHHGHARGAP-PLLQHAALPRHGGHQGDQAH 533
           G   HH P   H     P HH H   AP     H   P H  H     H
Sbjct: 167 GYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPH 215

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>HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHRP-II)|
          Length = 332

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 13/44 (29%), Positives = 14/44 (31%)
 Frame = +3

Query: 402 HHGPGLRHSQPRVPQHHGHARGAPPLLQHAALPRHGGHQGDQAH 533
           HH     H+      HH H         HAA   H  H  D  H
Sbjct: 127 HHAADAHHAHHAADAHHAHHAADAHHAHHAAYAHHAHHASDAHH 170



 Score = 29.3 bits (64), Expect = 8.9
 Identities = 13/44 (29%), Positives = 14/44 (31%)
 Frame = +3

Query: 402 HHGPGLRHSQPRVPQHHGHARGAPPLLQHAALPRHGGHQGDQAH 533
           HH     H+      HH H         HAA   H  H  D  H
Sbjct: 109 HHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHH 152



 Score = 29.3 bits (64), Expect = 8.9
 Identities = 13/44 (29%), Positives = 14/44 (31%)
 Frame = +3

Query: 402 HHGPGLRHSQPRVPQHHGHARGAPPLLQHAALPRHGGHQGDQAH 533
           HH     H+      HH H         HAA   H  H  D  H
Sbjct: 100 HHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHH 143



 Score = 29.3 bits (64), Expect = 8.9
 Identities = 13/44 (29%), Positives = 14/44 (31%)
 Frame = +3

Query: 402 HHGPGLRHSQPRVPQHHGHARGAPPLLQHAALPRHGGHQGDQAH 533
           HH     H+      HH H         HAA   H  H  D  H
Sbjct: 91  HHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHH 134



 Score = 29.3 bits (64), Expect = 8.9
 Identities = 13/44 (29%), Positives = 14/44 (31%)
 Frame = +3

Query: 402 HHGPGLRHSQPRVPQHHGHARGAPPLLQHAALPRHGGHQGDQAH 533
           HH     H+      HH H         HAA   H  H  D  H
Sbjct: 82  HHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHH 125



 Score = 29.3 bits (64), Expect = 8.9
 Identities = 13/44 (29%), Positives = 14/44 (31%)
 Frame = +3

Query: 402 HHGPGLRHSQPRVPQHHGHARGAPPLLQHAALPRHGGHQGDQAH 533
           HH     H+      HH H         HAA   H  H  D  H
Sbjct: 73  HHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHH 116

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>AROE_XANCP (Q8P3W6) Shikimate dehydrogenase (EC 1.1.1.25)|
          Length = 283

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/67 (31%), Positives = 24/67 (35%)
 Frame = +3

Query: 297 DRERVAGXXXXXXXXXXXXXXXRLDGVGLAAGGARHHGPGLRHSQPRVPQHHGHARGAPP 476
           DR RVAG                 DG GL       HG  LR  +  +    G ARG  P
Sbjct: 79  DRARVAGAVNTLVRNDGQWQGDNTDGAGLVRDLTERHGLDLRGRRVLLLGAGGAARGVAP 138

Query: 477 LLQHAAL 497
            L  A +
Sbjct: 139 ALLEAGI 145

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>SYA_STRT2 (Q5M5L5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 872

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 22/78 (28%), Positives = 35/78 (44%)
 Frame = +1

Query: 358 HYDSTEWDWLRGALATMDRDYGILNRVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPIL 537
           H    E + + GA   ++ D+   +RV  N T TH+ H    N+   HA++A    +   
Sbjct: 537 HTVEVEGELVVGANYKLEIDHSRRHRVMKNHTATHLLHAALHNIVGNHAVQAGSLNEQ-- 594

Query: 538 GEYYQFDGTPVAKATWRE 591
            E+ +FD T     T  E
Sbjct: 595 -EFLRFDFTHFEAVTPEE 611

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>SYA_STRT1 (Q5M126) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 872

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 22/78 (28%), Positives = 35/78 (44%)
 Frame = +1

Query: 358 HYDSTEWDWLRGALATMDRDYGILNRVFHNITDTHVAHHLFSNMPHYHAMEATKAIKPIL 537
           H    E + + GA   ++ D+   +RV  N T TH+ H    N+   HA++A    +   
Sbjct: 537 HTVEVEGELVVGANYKLEIDHSRRHRVMKNHTATHLLHAALHNIVGNHAVQAGSLNEQ-- 594

Query: 538 GEYYQFDGTPVAKATWRE 591
            E+ +FD T     T  E
Sbjct: 595 -EFLRFDFTHFEAVTPEE 611

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>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor|
           (Histidine-proline-rich glycoprotein) (HPRG) (Fragment)
          Length = 526

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 13/71 (18%)
 Frame = +3

Query: 405 HGPGLRHSQPRVPQHHGHARGAPPLLQHAALPR-HGGH-----------QGDQ-AHPRRV 545
           HGP      P  P  HGH    PP   H   P  HG H           +G Q  H   +
Sbjct: 375 HGPPPHGHPPHGPPPHGHPPHGPP--PHGHPPHGHGFHDHGPCDPPSHKEGPQDLHQHAM 432

Query: 546 LPV*RHPGRQG 578
            P  +HPG++G
Sbjct: 433 GPPPKHPGKRG 443



 Score = 29.6 bits (65), Expect = 6.8
 Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
 Frame = +3

Query: 393 GARHHGPGLRHSQPRVPQHHGHARGAPPLLQHAALPRHGGH-QGDQAHPRRVLPV*RHP 566
           G   HGP      P  P  HGH    PP       PRH  H      HP    P   HP
Sbjct: 332 GHHPHGPPPHGHHPHGPPPHGHPPHGPP-------PRHPPHGPPPHGHPPHGPPPHGHP 383

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>RL3_LEPIN (Q9XD36) 50S ribosomal protein L3|
          Length = 206

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +3

Query: 438 VPQHHGHARGAPPLLQHAALPRHGGHQGDQAHPRRVLPV*RHPGRQG 578
           V + HGHA G  P    +   RH G  G  + P RV    + PGR G
Sbjct: 122 VVKRHGHAGG--PGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTG 166

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>RL3_LEPIC (Q72NG1) 50S ribosomal protein L3|
          Length = 206

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +3

Query: 438 VPQHHGHARGAPPLLQHAALPRHGGHQGDQAHPRRVLPV*RHPGRQG 578
           V + HGHA G  P    +   RH G  G  + P RV    + PGR G
Sbjct: 122 VVKRHGHAGG--PGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTG 166

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>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53)
          Length = 940

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
 Frame = +3

Query: 375  VGLAAGGARHHGPGLRHSQPR------VPQHHGHARGAPPLLQHAAL--PRHG-----GH 515
            +G + G   H GPG  H  P       VP H GH    PP  +H     P HG     GH
Sbjct: 840  MGGSGGHRPHEGPG--HGGPHGHRPHDVPGHRGHDHRGPP-HEHRGHDGPGHGGGGHRGH 896

Query: 516  QGDQAH 533
             G  +H
Sbjct: 897  DGGHSH 902

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>PO3F3_RAT (Q63262) POU domain, class 3, transcription factor 3|
           (Brain-specific homeobox/POU domain protein 1) (Brain-1)
           (Brn-1 protein)
          Length = 497

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
 Frame = +3

Query: 372 GVGLAAGGARHH-GPGL-RHSQPRVPQHHGH----ARGAPPLLQHAALPRHGGHQG 521
           G G A GGA+    PGL R   P + +HH H    A   PP   HA  P H G  G
Sbjct: 242 GGGGAGGGAQSLVHPGLVRGDTPELAEHHHHHHHHAHPHPPHPHHAQGPPHHGGGG 297

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>Y691_RICPR (Q9ZCN2) Hypothetical protein RP691|
          Length = 656

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +1

Query: 361 YDSTEWDWLRGALATMDRDYGILNRVFHNITDTHVAHHLFSNMPHYH-AMEATKAIKPIL 537
           Y ST   ++R A   +   YG  N++  NIT   +AH +F    +Y+ A   T AI P++
Sbjct: 513 YASTSVKFMRLASLLVSTYYG--NKLIENITGEKLAHDMFFQKFYYNDAARLTVAIVPLI 570

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>PO3F3_MOUSE (P31361) POU domain, class 3, transcription factor 3|
           (Brain-specific homeobox/POU domain protein 1) (Brain-1)
           (Brn-1 protein)
          Length = 495

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
 Frame = +3

Query: 372 GVGLAAGGARHH-GPGL-RHSQPRVPQHHGH----ARGAPPLLQHAALPRHGGHQG 521
           G G A GGA+    PGL R   P + +HH H    A   PP   HA  P H G  G
Sbjct: 240 GGGGAGGGAQSLVHPGLVRGDTPELAEHHHHHHHHAHPHPPHPHHAQGPPHHGGGG 295

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>TRMU2_THETN (Q8R7F0) Probable tRNA|
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           2 (EC 2.1.1.61)
          Length = 364

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +1

Query: 295 LIVNAWLVLITYLQHTHPALPHYDSTEWDWLRGALATMDRDYGILNRVFHNITDTHVAHH 474
           L+  AW++   Y+   H A+  YD     +L        +D      V +N+T T + H 
Sbjct: 115 LLKRAWMIDAYYVATGHYAIKEYDEERGRYLLKKSVDTSKDQ---TYVLYNLTQTQLEHI 171

Query: 475 LF 480
           LF
Sbjct: 172 LF 173

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>RM09_YEAST (P31334) 60S ribosomal protein L9, mitochondrial precursor (YmL9)|
          Length = 269

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 501 RHGGHQGDQAHPRRVLPV*RHPGRQGH 581
           RHGG  G    P RVLP  + PG  G+
Sbjct: 200 RHGGSYGQNQDPGRVLPGRKMPGHMGN 226

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>SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dependent regulator|
            of chromatin subfamily C member 1 (SWI/SNF complex 155
            kDa subunit) (BRG1-associated factor 155)
          Length = 1105

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 22/67 (32%), Positives = 27/67 (40%)
 Frame = +3

Query: 372  GVGLAAGGARHHGPGLRHSQPRVPQHHGHARGAPPLLQHAALPRHGGHQGDQAHPRRVLP 551
            G GLA  GA  H   + H QP  P +        PL+ H   P H    G    P  ++P
Sbjct: 976  GPGLAPLGAAGHPGMMPHQQP--PPY--------PLMHHQMPPPHPPQPGQIPGPGSMMP 1025

Query: 552  V*RHPGR 572
                PGR
Sbjct: 1026 GQHMPGR 1032

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>Y307_RHOPA (P61415) UPF0314 protein RPA0307|
          Length = 203

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = -3

Query: 587 RHVALATGVPSNW*YSPRMGLIALVASMAW*CGMLEKRWCATCVSVMLWN 438
           R V+ A G+P  W  +  +GL+A+ A++ +  G +      TC +V LW+
Sbjct: 8   RPVSSAAGLPVRWALAVVLGLLAIQATVLFAMGRVP---ICTCGTVKLWH 54

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>LLCD_SYNY3 (Q08871) Linoleoyl-CoA desaturase (EC 1.14.19.3)|
           (Delta(6)-desaturase)
          Length = 359

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 25/119 (21%)
 Frame = +1

Query: 265 WVVRVYGVPL--------LIVNAWLVLITY--LQHTHPALPHY-DSTEWDWLRGALATMD 411
           W+  V+G+PL        +++ A +  +TY  +  T   L H  +STE+    G    +D
Sbjct: 213 WLGYVFGLPLALGFSIPEVLIGASVTYMTYGIVVCTIFMLAHVLESTEFLTPDGESGAID 272

Query: 412 RDYGIL----------NRVFHNI----TDTHVAHHLFSNMPHYHAMEATKAIKPILGEY 546
            ++ I           N  F N      +  V HHLF N+ H H  +    IK +  E+
Sbjct: 273 DEWAICQIRTTANFATNNPFWNWFCGGLNHQVTHHLFPNICHIHYPQLENIIKDVCQEF 331

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>SYT3_HUMAN (Q9BQG1) Synaptotagmin-3 (Synaptotagmin III) (SytIII)|
          Length = 590

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = +3

Query: 378 GLAAGGARHHGPGLR-HSQPRVPQHHGHARGAPPLLQ 485
           GL  GG  H   GL  H     P HH HA   PP  +
Sbjct: 108 GLVGGGGHHLAAGLGGHPLLGGPHHHAHAAHHPPFAE 144

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>KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C member 3|
           (Voltage-gated potassium channel subunit Kv3.3)
           (KSHIIID)
          Length = 757

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 408 GPGLRHSQPRVPQHHGHARGAP-PLLQHAALPRHGGHQGD 524
           GP    + P  P+  G  R  P P L  AA+ RHGG  GD
Sbjct: 47  GPAASPAGPPAPRGPGGRRAEPCPGLPAAAMGRHGGGGGD 86

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>FAD5_MORAP (O74212) Delta-5 fatty acid desaturase (EC 1.14.19.-)|
          Length = 446

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
 Frame = +1

Query: 268 VVRVYGVPLLIVNAWLVLITYLQHT-----HPALPHYDSTEWDWLRGALATMDRDYGILN 432
           V+ ++ V  ++ + WL L     H       P        + DW    + T  +DY   +
Sbjct: 316 VLLLFTVADMVSSYWLALTFQANHVVEEVQWPLPDENGIIQKDWAAMQVETT-QDYAHDS 374

Query: 433 RVFHNITDT---HVAHHLFSNMPHYHAMEATKAIKPILGEY 546
            ++ +IT +      HHLF N+  +H  +    IK    EY
Sbjct: 375 HLWTSITGSLNYQAVHHLFPNVSQHHYPDILAIIKNTCSEY 415

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>GP124_MOUSE (Q91ZV8) Probable G-protein coupled receptor 124 precursor (Tumor|
           endothelial marker 5)
          Length = 1329

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +3

Query: 390 GGARHHGPGLRHSQPRVPQHH-GHARGAPPLLQHAALPRHGGHQGDQAHP 536
           GG    G  LR+SQP V   +  H      L++  A PR  G  G   HP
Sbjct: 713 GGWSSEGCRLRYSQPNVSSLYCQHLGNVAVLMELNAFPREAGGSGAGLHP 762


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,004,426
Number of Sequences: 219361
Number of extensions: 1441695
Number of successful extensions: 5075
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 4726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5011
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result