ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62i14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK062475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-F06, full insert sequence Length = 701 Score = 313 bits (158), Expect = 4e-82 Identities = 407/490 (83%) Strand = Plus / Plus Query: 20 tggatgagctccgcgcgctcatggcgtcgcactcgccgccgatccacgcgctcctcatcc 79 |||| ||||| ||||||||||||||| | ||||| ||| || ||||||||||| || ||| Sbjct: 186 tggacgagctgcgcgcgctcatggcggcccactccccgtcgctccacgcgctcgtcgtcc 245 Query: 80 catccgaggatgcccaccagagcgagtacgtgtcggagcgggacaagcggcggcaattcc 139 | |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 246 cgtccgaggacgcccaccagagcgagtatgtgtcggagcgggacaagcggcggcagttcg 305 Query: 140 tctccgggttcaccgggagcgctgggttggcccttatcactacaagggaggcgttattat 199 ||||||| ||||||||||||||||| ||||| |||||||||| | ||||||| || | | Sbjct: 306 tctccggcttcaccgggagcgctggtttggcgcttatcactatgaaggaggcgctacttt 365 Query: 200 ggacggatggacgatacttcttgcaggccattaatcaacttagcgatcggtggagactca 259 |||||||||| || |||||||||||||| | ||||| | |||| |||| | | | Sbjct: 366 ggacggatgggcgttacttcttgcaggcagagcagcaactcactaatcgctggaaattga 425 Query: 260 tgcgcatgggagaagatccaccagtcgaagtctggatagctgataatctcgcggatgaag 319 ||||||||||||||||||| ||||| ||||| |||||||||||||| || | ||||||| Sbjct: 426 tgcgcatgggagaagatcccccagttgaagtttggatagctgataacctgtcagatgaag 485 Query: 320 cgattattggaattgattcatggtgcatctctgtggattctgctcagagatatgagcaag 379 | | ||||||||| || |||||||||||||||| || |||| |||||||||||||| | Sbjct: 486 ctgtcattggaattaatccatggtgcatctctgttgacactgcccagagatatgagcatg 545 Query: 380 catttttgaagaagaatcagacgttgtttcagctttcctctgacctcgtcgatgcagttt 439 |||||| |||||| | ||||| ||||||||||||| |||||| | || |||| | | | Sbjct: 546 cattttcaaagaagcaccagacactgtttcagctttcttctgacttggtagatgaaatat 605 Query: 440 ggaaacatcgtcctccgaatgatgctacacctgtaattgtgcaccctatagaatttgctg 499 |||| |||||||||| | ||||| ||||||| ||||||| ||| |||| | ||||| Sbjct: 606 ggaaggatcgtcctcctgttaatgctctacctgtatttgtgcaacctgtagagtatgctg 665 Query: 500 ggcgtagtgt 509 || ||||||| Sbjct: 666 ggtgtagtgt 675
>dbj|AK102913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113M01, full insert sequence Length = 2519 Score = 230 bits (116), Expect = 4e-57 Identities = 361/444 (81%), Gaps = 9/444 (2%) Strand = Plus / Plus Query: 20 tggatgagctccgcgcgctcatggcgtcgcactcgccgccgatccacgcgctcctcatcc 79 |||| ||||| ||||||||||||||| | ||||| |||||| ||||||||||| || ||| Sbjct: 108 tggacgagctgcgcgcgctcatggcggcccactccccgccgctccacgcgctcgtcgtcc 167 Query: 80 catccgaggatgcccaccagagcgagtacgtgtcggagcgggacaagcggcggcaattcc 139 ||||||| || ||||||||||||||||| ||| |||||||||||||||||| ||| ||| Sbjct: 168 catccgacgacgcccaccagagcgagtatgtggcggagcgggacaagcggctgcagttca 227 Query: 140 tctccgggttcaccggg---------agcgctgggttggcccttatcactacaagggagg 190 ||||||||||||||||| |||||||| ||||| |||||||||| | ||||| Sbjct: 228 tctccgggttcaccgggatcgcccgcagcgctggtttggctcttatcactatgaaggagg 287 Query: 191 cgttattatggacggatggacgatacttcttgcaggccattaatcaacttagcgatcggt 250 || || | ||||||||||| || ||||| |||||||| || || || || |||| | Sbjct: 288 cgctactgtggacggatgggcgttactttttgcaggcagagaagcagctcagtgatcact 347 Query: 251 ggagactcatgcgcatgggagaagatccaccagtcgaagtctggatagctgataatctcg 310 || | | ||| |||||||||||||||||||||| ||||| ||||| |||||||| || Sbjct: 348 gggaattgatgtgcatgggagaagatccaccagttgaagtttggattgctgataacctat 407 Query: 311 cggatgaagcgattattggaattgattcatggtgcatctctgtggattctgctcagagat 370 | |||||||| | ||||||||| || |||||||||||||||| || |||| || |||| Sbjct: 408 cagatgaagccgtcattggaattaatccatggtgcatctctgttgacactgcccaaagat 467 Query: 371 atgagcaagcatttttgaagaagaatcagacgttgtttcagctttcctctgacctcgtcg 430 ||||||| ||||||| |||||| | ||||| ||||||| ||||| |||||| | || | Sbjct: 468 atgagcatgcattttcaaagaagcaccagacactgtttcaactttcttctgacttggtag 527 Query: 431 atgcagtttggaaacatcgtcctc 454 ||| ||| ||||| ||||||||| Sbjct: 528 atgaagtatggaaggatcgtcctc 551 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 523 aaggagttaagagaaaagttacaacatgaaaaggctagcggcatcataattacggccctt 582 |||||||||||| |||| |||| ||||||||||||||| ||||| |||||| | |||||| Sbjct: 617 aaggagttaagaaaaaaattactacatgaaaaggctaggggcattataattgctgccctt 676 Query: 583 gatgaggttgcttggttg 600 |||||||||||||||||| Sbjct: 677 gatgaggttgcttggttg 694
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 155 bits (78), Expect = 2e-34 Identities = 219/266 (82%) Strand = Plus / Minus Query: 325 attggaattgattcatggtgcatctctgtggattctgctcagagatatgagcaagcattt 384 ||||||||| || |||||||||||||||| || |||| |||||||||||||| |||||| Sbjct: 27042276 attggaattaatccatggtgcatctctgttgacactgcccagagatatgagcatgcattt 27042217 Query: 385 ttgaagaagaatcagacgttgtttcagctttcctctgacctcgtcgatgcagtttggaaa 444 | |||||| | ||||| ||||||||||||| |||||| | || |||| | | ||||| Sbjct: 27042216 tcaaagaagcaccagacactgtttcagctttcttctgacttggtagatgaaatatggaag 27042157 Query: 445 catcgtcctccgaatgatgctacacctgtaattgtgcaccctatagaatttgctgggcgt 504 |||||||||| | ||||| ||||||| ||||||| ||| |||| | ||||||| || Sbjct: 27042156 gatcgtcctcctgttaatgctctacctgtatttgtgcaacctgtagagtatgctgggtgt 27042097 Query: 505 agtgtagcacaaaagatgaaggagttaagagaaaagttacaacatgaaaaggctagcggc 564 ||||| | |||| | ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 27042096 agtgttaccgaaaaacttaaggagttaagagaaaaattacaacatgaaaaggctaggggc 27042037 Query: 565 atcataattacggcccttgatgaggt 590 || |||||| | || ||||||||||| Sbjct: 27042036 attataattgctgcgcttgatgaggt 27042011 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 97 cagagcgagtacgtgtcggagcgggacaagcggcggcaattcctctccgggttcaccggg 156 ||||||||||| |||||||||||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 27043762 cagagcgagtatgtgtcggagcgggacaagcggcggcagttcgtctccggcttcaccggg 27043703 Query: 157 agcgctgg 164 |||||||| Sbjct: 27043702 agcgctgg 27043695 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 20 tggatgagctccgcgcgctcatggcgtcgcactcgccgccgatccacgcgctcctcatcc 79 |||| ||||| ||||||||||||||| | ||||| ||| || ||||||||||| || ||| Sbjct: 27044008 tggacgagctgcgcgcgctcatggcggcccactccccgtcgctccacgcgctcgtcgtcc 27043949 Query: 80 catccgaggatgcccaccag 99 | |||||||| ||||||||| Sbjct: 27043948 cgtccgaggacgcccaccag 27043929 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Minus Query: 166 ttggcccttatcactacaagggaggcgttattatggacggatggacgatacttcttgcag 225 ||||| |||||||||| | ||||||| || | ||||||||||| || |||||||||||| Sbjct: 27043085 ttggcgcttatcactatgaaggaggcgctactttggacggatgggcgttacttcttgcag 27043026 Query: 226 gccattaatcaacttagcgatcggtggagactcatgcgcatgggagaagatccaccagtc 285 || | ||||| | |||| |||| | | |||||||||||||||||||| ||||| Sbjct: 27043025 gcagagcagcaactcactaatcgctggaaattgatgcgcatgggagaagatcccccagtt 27042966 Query: 286 gaagtctggatagctgat 303 ||||| |||||||||||| Sbjct: 27042965 gaagtttggatagctgat 27042948
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 155 bits (78), Expect = 2e-34 Identities = 219/266 (82%) Strand = Plus / Minus Query: 325 attggaattgattcatggtgcatctctgtggattctgctcagagatatgagcaagcattt 384 ||||||||| || |||||||||||||||| || |||| |||||||||||||| |||||| Sbjct: 11086 attggaattaatccatggtgcatctctgttgacactgcccagagatatgagcatgcattt 11027 Query: 385 ttgaagaagaatcagacgttgtttcagctttcctctgacctcgtcgatgcagtttggaaa 444 | |||||| | ||||| ||||||||||||| |||||| | || |||| | | ||||| Sbjct: 11026 tcaaagaagcaccagacactgtttcagctttcttctgacttggtagatgaaatatggaag 10967 Query: 445 catcgtcctccgaatgatgctacacctgtaattgtgcaccctatagaatttgctgggcgt 504 |||||||||| | ||||| ||||||| ||||||| ||| |||| | ||||||| || Sbjct: 10966 gatcgtcctcctgttaatgctctacctgtatttgtgcaacctgtagagtatgctgggtgt 10907 Query: 505 agtgtagcacaaaagatgaaggagttaagagaaaagttacaacatgaaaaggctagcggc 564 ||||| | |||| | ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 10906 agtgttaccgaaaaacttaaggagttaagagaaaaattacaacatgaaaaggctaggggc 10847 Query: 565 atcataattacggcccttgatgaggt 590 || |||||| | || ||||||||||| Sbjct: 10846 attataattgctgcgcttgatgaggt 10821 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 97 cagagcgagtacgtgtcggagcgggacaagcggcggcaattcctctccgggttcaccggg 156 ||||||||||| |||||||||||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 12572 cagagcgagtatgtgtcggagcgggacaagcggcggcagttcgtctccggcttcaccggg 12513 Query: 157 agcgctgg 164 |||||||| Sbjct: 12512 agcgctgg 12505 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 20 tggatgagctccgcgcgctcatggcgtcgcactcgccgccgatccacgcgctcctcatcc 79 |||| ||||| ||||||||||||||| | ||||| ||| || ||||||||||| || ||| Sbjct: 12818 tggacgagctgcgcgcgctcatggcggcccactccccgtcgctccacgcgctcgtcgtcc 12759 Query: 80 catccgaggatgcccaccag 99 | |||||||| ||||||||| Sbjct: 12758 cgtccgaggacgcccaccag 12739 Score = 67.9 bits (34), Expect = 4e-08 Identities = 112/138 (81%) Strand = Plus / Minus Query: 166 ttggcccttatcactacaagggaggcgttattatggacggatggacgatacttcttgcag 225 ||||| |||||||||| | ||||||| || | ||||||||||| || |||||||||||| Sbjct: 11895 ttggcgcttatcactatgaaggaggcgctactttggacggatgggcgttacttcttgcag 11836 Query: 226 gccattaatcaacttagcgatcggtggagactcatgcgcatgggagaagatccaccagtc 285 || | ||||| | |||| |||| | | |||||||||||||||||||| ||||| Sbjct: 11835 gcagagcagcaactcactaatcgctggaaattgatgcgcatgggagaagatcccccagtt 11776 Query: 286 gaagtctggatagctgat 303 ||||| |||||||||||| Sbjct: 11775 gaagtttggatagctgat 11758
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Minus Query: 97 cagagcgagtacgtgtcggagcgggacaagcggcggcaattcctctccgggttcaccggg 156 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 55691 cagagcgagtacgtgtcggagcgggacaagcggcggcagttcgtctccgggttcaccggg 55632 Query: 157 agcgc 161 ||||| Sbjct: 55631 agcgc 55627 Score = 99.6 bits (50), Expect = 1e-17 Identities = 221/278 (79%) Strand = Plus / Minus Query: 313 gatgaagcgattattggaattgattcatggtgcatctctgtggattctgctcagagatat 372 |||||||| || |||||||| || |||||||||||||||| || |||| |||||||| Sbjct: 53959 gatgaagctgttgttggaattaatccatggtgcatctctgttgacactgcccagagatac 53900 Query: 373 gagcaagcatttttgaagaagaatcagacgttgtttcagctttcctctgacctcgtcgat 432 ||||| ||||||| |||||| | ||||| ||||||||||||| |||||| | | ||| Sbjct: 53899 gagcatgcattttcaaagaagcaccagacactgtttcagctttcttctgacttgatagat 53840 Query: 433 gcagtttggaaacatcgtcctccgaatgatgctacacctgtaattgtgcaccctatagaa 492 | | | ||||| |||||||| || || ||| ||||||| ||||||| ||| |||| Sbjct: 53839 gaaatatggaaggatcgtccttcggccgaggctctacctgtatttgtgcaacctgtagag 53780 Query: 493 tttgctgggcgtagtgtagcacaaaagatgaaggagttaagagaaaagttacaacatgaa 552 | |||||| |||| ||| | |||| | ||||| ||||||||||| || | ||||||| Sbjct: 53779 tatgctggccgtactgttaccgaaaaacttaaggaattaagagaaaaatttctacatgaa 53720 Query: 553 aaggctagcggcatcataattacggcccttgatgaggt 590 |||||||| ||||| |||||| | || ||||||||||| Sbjct: 53719 aaggctaggggcattataattgctgcacttgatgaggt 53682 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 97 cagagcgagtacgtgtcggagcgggacaagcggcggcaattcctctccgggttcaccggg 156 ||||||||||| ||| |||||||||||||||||| ||| ||| ||||||||||||||||| Sbjct: 71695 cagagcgagtatgtggcggagcgggacaagcggctgcagttcatctccgggttcaccggg 71636 Query: 157 a 157 | Sbjct: 71635 a 71635 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 20 tggatgagctccgcgcgctcatggcgtcgcactcgccgccgatccacgcgctcctcatcc 79 |||| ||||| ||||||||||||||| | ||||| |||||| ||||||||||| || ||| Sbjct: 71958 tggacgagctgcgcgcgctcatggcggcccactccccgccgctccacgcgctcgtcgtcc 71899 Query: 80 catccgaggatgcccaccag 99 ||||||| || ||||||||| Sbjct: 71898 catccgacgacgcccaccag 71879 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 523 aaggagttaagagaaaagttacaacatgaaaaggctagcggcatcataattacggccctt 582 |||||||||||| |||| |||| ||||||||||||||| ||||| |||||| | |||||| Sbjct: 69621 aaggagttaagaaaaaaattactacatgaaaaggctaggggcattataattgctgccctt 69562 Query: 583 gatgaggt 590 |||||||| Sbjct: 69561 gatgaggt 69554 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 20 tggatgagctccgcgcgctcatggcgtcgcactcgccgccgatccacgcgctcctcatcc 79 |||| ||||| ||||||||||||||| ||||||| |||||| ||||||||||| || ||| Sbjct: 55917 tggacgagctgcgcgcgctcatggcggcgcactccccgccgctccacgcgctcgtcgtcc 55858 Query: 80 catccgaggatgcccaccag 99 | ||||| || ||||||||| Sbjct: 55857 cctccgaagacgcccaccag 55838 Score = 75.8 bits (38), Expect = 1e-10 Identities = 107/130 (82%) Strand = Plus / Minus Query: 325 attggaattgattcatggtgcatctctgtggattctgctcagagatatgagcaagcattt 384 ||||||||| || |||||||||||||||| || |||| || ||||||||||| |||||| Sbjct: 69816 attggaattaatccatggtgcatctctgttgacactgcccaaagatatgagcatgcattt 69757 Query: 385 ttgaagaagaatcagacgttgtttcagctttcctctgacctcgtcgatgcagtttggaaa 444 | |||||| | ||||| ||||||| ||||| |||||| | || |||| ||| ||||| Sbjct: 69756 tcaaagaagcaccagacactgtttcaactttcttctgacttggtagatgaagtatggaag 69697 Query: 445 catcgtcctc 454 ||||||||| Sbjct: 69696 gatcgtcctc 69687 Score = 67.9 bits (34), Expect = 4e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 186 ggaggcgttattatggacggatggacgatacttcttgcaggccattaatcaacttagcga 245 ||||||| |||| ||||||||||| || |||||||||||||| | ||||| || || Sbjct: 54647 ggaggcgctattgtggacggatgggcgttacttcttgcaggcagagcagcaactcagtga 54588 Query: 246 tcggtggagactcatgcgcatgggagaagatccaccagtcgaagtctggatagctgat 303 ||| |||| | | ||||| |||||||||||||| || || ||||| |||||||||||| Sbjct: 54587 tcgctggaaattgatgcgaatgggagaagatcccccggttgaagtttggatagctgat 54530 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 263 gcatgggagaagatccaccagtcgaagtctggatagctgat 303 |||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 70794 gcatgggagaagatccaccagttgaagtttggattgctgat 70754
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Minus Query: 97 cagagcgagtacgtgtcggagcgggacaagcggcggcaattcctctccgggttcaccggg 156 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 19052873 cagagcgagtacgtgtcggagcgggacaagcggcggcagttcgtctccgggttcaccggg 19052814 Query: 157 agcgc 161 ||||| Sbjct: 19052813 agcgc 19052809 Score = 99.6 bits (50), Expect = 1e-17 Identities = 221/278 (79%) Strand = Plus / Minus Query: 313 gatgaagcgattattggaattgattcatggtgcatctctgtggattctgctcagagatat 372 |||||||| || |||||||| || |||||||||||||||| || |||| |||||||| Sbjct: 19051141 gatgaagctgttgttggaattaatccatggtgcatctctgttgacactgcccagagatac 19051082 Query: 373 gagcaagcatttttgaagaagaatcagacgttgtttcagctttcctctgacctcgtcgat 432 ||||| ||||||| |||||| | ||||| ||||||||||||| |||||| | | ||| Sbjct: 19051081 gagcatgcattttcaaagaagcaccagacactgtttcagctttcttctgacttgatagat 19051022 Query: 433 gcagtttggaaacatcgtcctccgaatgatgctacacctgtaattgtgcaccctatagaa 492 | | | ||||| |||||||| || || ||| ||||||| ||||||| ||| |||| Sbjct: 19051021 gaaatatggaaggatcgtccttcggccgaggctctacctgtatttgtgcaacctgtagag 19050962 Query: 493 tttgctgggcgtagtgtagcacaaaagatgaaggagttaagagaaaagttacaacatgaa 552 | |||||| |||| ||| | |||| | ||||| ||||||||||| || | ||||||| Sbjct: 19050961 tatgctggccgtactgttaccgaaaaacttaaggaattaagagaaaaatttctacatgaa 19050902 Query: 553 aaggctagcggcatcataattacggcccttgatgaggt 590 |||||||| ||||| |||||| | || ||||||||||| Sbjct: 19050901 aaggctaggggcattataattgctgcacttgatgaggt 19050864 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 97 cagagcgagtacgtgtcggagcgggacaagcggcggcaattcctctccgggttcaccggg 156 ||||||||||| ||| |||||||||||||||||| ||| ||| ||||||||||||||||| Sbjct: 19068877 cagagcgagtatgtggcggagcgggacaagcggctgcagttcatctccgggttcaccggg 19068818 Query: 157 a 157 | Sbjct: 19068817 a 19068817 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 20 tggatgagctccgcgcgctcatggcgtcgcactcgccgccgatccacgcgctcctcatcc 79 |||| ||||| ||||||||||||||| | ||||| |||||| ||||||||||| || ||| Sbjct: 19069140 tggacgagctgcgcgcgctcatggcggcccactccccgccgctccacgcgctcgtcgtcc 19069081 Query: 80 catccgaggatgcccaccag 99 ||||||| || ||||||||| Sbjct: 19069080 catccgacgacgcccaccag 19069061 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 523 aaggagttaagagaaaagttacaacatgaaaaggctagcggcatcataattacggccctt 582 |||||||||||| |||| |||| ||||||||||||||| ||||| |||||| | |||||| Sbjct: 19066803 aaggagttaagaaaaaaattactacatgaaaaggctaggggcattataattgctgccctt 19066744 Query: 583 gatgaggt 590 |||||||| Sbjct: 19066743 gatgaggt 19066736 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 20 tggatgagctccgcgcgctcatggcgtcgcactcgccgccgatccacgcgctcctcatcc 79 |||| ||||| ||||||||||||||| ||||||| |||||| ||||||||||| || ||| Sbjct: 19053099 tggacgagctgcgcgcgctcatggcggcgcactccccgccgctccacgcgctcgtcgtcc 19053040 Query: 80 catccgaggatgcccaccag 99 | ||||| || ||||||||| Sbjct: 19053039 cctccgaagacgcccaccag 19053020 Score = 75.8 bits (38), Expect = 1e-10 Identities = 107/130 (82%) Strand = Plus / Minus Query: 325 attggaattgattcatggtgcatctctgtggattctgctcagagatatgagcaagcattt 384 ||||||||| || |||||||||||||||| || |||| || ||||||||||| |||||| Sbjct: 19066998 attggaattaatccatggtgcatctctgttgacactgcccaaagatatgagcatgcattt 19066939 Query: 385 ttgaagaagaatcagacgttgtttcagctttcctctgacctcgtcgatgcagtttggaaa 444 | |||||| | ||||| ||||||| ||||| |||||| | || |||| ||| ||||| Sbjct: 19066938 tcaaagaagcaccagacactgtttcaactttcttctgacttggtagatgaagtatggaag 19066879 Query: 445 catcgtcctc 454 ||||||||| Sbjct: 19066878 gatcgtcctc 19066869 Score = 67.9 bits (34), Expect = 4e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 186 ggaggcgttattatggacggatggacgatacttcttgcaggccattaatcaacttagcga 245 ||||||| |||| ||||||||||| || |||||||||||||| | ||||| || || Sbjct: 19051829 ggaggcgctattgtggacggatgggcgttacttcttgcaggcagagcagcaactcagtga 19051770 Query: 246 tcggtggagactcatgcgcatgggagaagatccaccagtcgaagtctggatagctgat 303 ||| |||| | | ||||| |||||||||||||| || || ||||| |||||||||||| Sbjct: 19051769 tcgctggaaattgatgcgaatgggagaagatcccccggttgaagtttggatagctgat 19051712 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 263 gcatgggagaagatccaccagtcgaagtctggatagctgat 303 |||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 19067976 gcatgggagaagatccaccagttgaagtttggattgctgat 19067936
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Minus Query: 97 cagagcgagtacgtgtcggagcgggacaagcggcggcaattcctctccgggttcaccggg 156 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 19211522 cagagcgagtacgtgtcggagcgggacaagcggcggcagttcgtctccgggttcaccggg 19211463 Query: 157 agcgc 161 ||||| Sbjct: 19211462 agcgc 19211458 Score = 99.6 bits (50), Expect = 1e-17 Identities = 221/278 (79%) Strand = Plus / Minus Query: 313 gatgaagcgattattggaattgattcatggtgcatctctgtggattctgctcagagatat 372 |||||||| || |||||||| || |||||||||||||||| || |||| |||||||| Sbjct: 19209790 gatgaagctgttgttggaattaatccatggtgcatctctgttgacactgcccagagatac 19209731 Query: 373 gagcaagcatttttgaagaagaatcagacgttgtttcagctttcctctgacctcgtcgat 432 ||||| ||||||| |||||| | ||||| ||||||||||||| |||||| | | ||| Sbjct: 19209730 gagcatgcattttcaaagaagcaccagacactgtttcagctttcttctgacttgatagat 19209671 Query: 433 gcagtttggaaacatcgtcctccgaatgatgctacacctgtaattgtgcaccctatagaa 492 | | | ||||| |||||||| || || ||| ||||||| ||||||| ||| |||| Sbjct: 19209670 gaaatatggaaggatcgtccttcggccgaggctctacctgtatttgtgcaacctgtagag 19209611 Query: 493 tttgctgggcgtagtgtagcacaaaagatgaaggagttaagagaaaagttacaacatgaa 552 | |||||| |||| ||| | |||| | ||||| ||||||||||| || | ||||||| Sbjct: 19209610 tatgctggccgtactgttaccgaaaaacttaaggaattaagagaaaaatttctacatgaa 19209551 Query: 553 aaggctagcggcatcataattacggcccttgatgaggt 590 |||||||| ||||| |||||| | || ||||||||||| Sbjct: 19209550 aaggctaggggcattataattgctgcacttgatgaggt 19209513 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 97 cagagcgagtacgtgtcggagcgggacaagcggcggcaattcctctccgggttcaccggg 156 ||||||||||| ||| |||||||||||||||||| ||| ||| ||||||||||||||||| Sbjct: 19227526 cagagcgagtatgtggcggagcgggacaagcggctgcagttcatctccgggttcaccggg 19227467 Query: 157 a 157 | Sbjct: 19227466 a 19227466 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 20 tggatgagctccgcgcgctcatggcgtcgcactcgccgccgatccacgcgctcctcatcc 79 |||| ||||| ||||||||||||||| | ||||| |||||| ||||||||||| || ||| Sbjct: 19227789 tggacgagctgcgcgcgctcatggcggcccactccccgccgctccacgcgctcgtcgtcc 19227730 Query: 80 catccgaggatgcccaccag 99 ||||||| || ||||||||| Sbjct: 19227729 catccgacgacgcccaccag 19227710 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 523 aaggagttaagagaaaagttacaacatgaaaaggctagcggcatcataattacggccctt 582 |||||||||||| |||| |||| ||||||||||||||| ||||| |||||| | |||||| Sbjct: 19225452 aaggagttaagaaaaaaattactacatgaaaaggctaggggcattataattgctgccctt 19225393 Query: 583 gatgaggt 590 |||||||| Sbjct: 19225392 gatgaggt 19225385 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 20 tggatgagctccgcgcgctcatggcgtcgcactcgccgccgatccacgcgctcctcatcc 79 |||| ||||| ||||||||||||||| ||||||| |||||| ||||||||||| || ||| Sbjct: 19211748 tggacgagctgcgcgcgctcatggcggcgcactccccgccgctccacgcgctcgtcgtcc 19211689 Query: 80 catccgaggatgcccaccag 99 | ||||| || ||||||||| Sbjct: 19211688 cctccgaagacgcccaccag 19211669 Score = 75.8 bits (38), Expect = 1e-10 Identities = 107/130 (82%) Strand = Plus / Minus Query: 325 attggaattgattcatggtgcatctctgtggattctgctcagagatatgagcaagcattt 384 ||||||||| || |||||||||||||||| || |||| || ||||||||||| |||||| Sbjct: 19225647 attggaattaatccatggtgcatctctgttgacactgcccaaagatatgagcatgcattt 19225588 Query: 385 ttgaagaagaatcagacgttgtttcagctttcctctgacctcgtcgatgcagtttggaaa 444 | |||||| | ||||| ||||||| ||||| |||||| | || |||| ||| ||||| Sbjct: 19225587 tcaaagaagcaccagacactgtttcaactttcttctgacttggtagatgaagtatggaag 19225528 Query: 445 catcgtcctc 454 ||||||||| Sbjct: 19225527 gatcgtcctc 19225518 Score = 67.9 bits (34), Expect = 4e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 186 ggaggcgttattatggacggatggacgatacttcttgcaggccattaatcaacttagcga 245 ||||||| |||| ||||||||||| || |||||||||||||| | ||||| || || Sbjct: 19210478 ggaggcgctattgtggacggatgggcgttacttcttgcaggcagagcagcaactcagtga 19210419 Query: 246 tcggtggagactcatgcgcatgggagaagatccaccagtcgaagtctggatagctgat 303 ||| |||| | | ||||| |||||||||||||| || || ||||| |||||||||||| Sbjct: 19210418 tcgctggaaattgatgcgaatgggagaagatcccccggttgaagtttggatagctgat 19210361 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 263 gcatgggagaagatccaccagtcgaagtctggatagctgat 303 |||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 19226625 gcatgggagaagatccaccagttgaagtttggattgctgat 19226585
>dbj|AK105673.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A09, full insert sequence Length = 1721 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 546 acatgaaaaggctagcggcatcataattacggcccttgatgaggttgcttggttg 600 ||||||||||||||| ||||| |||||| | || ||||||||||||||||||||| Sbjct: 1 acatgaaaaggctaggggcattataattgctgcacttgatgaggttgcttggttg 55
>ref|NM_119840.2| Arabidopsis thaliana ATAPP1 AT4G36760 (ATAPP1) transcript variant AT4G36760.1 mRNA, complete cds Length = 2212 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 199 tggacggatggacgatacttcttgcaggccattaatcaacttagcgatcggtggagactc 258 ||||| ||||| |||||||||||||| || | | || ||||||||| ||||| ||| Sbjct: 238 tggacagatggtcgatacttcttgcaagcattgcaacagcttagcgatgagtggacacta 297 Query: 259 atgcgcatgggagaagatccaccagtcgaagtctggatagctgataatct 308 ||||| |||||||||||||| | || ||||| ||||| |||||||||| Sbjct: 298 atgcggatgggagaagatcctcttgttgaagtttggatgtctgataatct 347
>ref|NM_202967.1| Arabidopsis thaliana ATAPP1 AT4G36760 (ATAPP1) transcript variant AT4G36760.2 mRNA, complete cds Length = 2227 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 199 tggacggatggacgatacttcttgcaggccattaatcaacttagcgatcggtggagactc 258 ||||| ||||| |||||||||||||| || | | || ||||||||| ||||| ||| Sbjct: 249 tggacagatggtcgatacttcttgcaagcattgcaacagcttagcgatgagtggacacta 308 Query: 259 atgcgcatgggagaagatccaccagtcgaagtctggatagctgataatct 308 ||||| |||||||||||||| | || ||||| ||||| |||||||||| Sbjct: 309 atgcggatgggagaagatcctcttgttgaagtttggatgtctgataatct 358
>gb|AY552784.1| Arabidopsis thaliana aminopeptidase P short isoform mRNA, complete cds Length = 2078 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 199 tggacggatggacgatacttcttgcaggccattaatcaacttagcgatcggtggagactc 258 ||||| ||||| |||||||||||||| || | | || ||||||||| ||||| ||| Sbjct: 160 tggacagatggtcgatacttcttgcaagcattgcaacagcttagcgatgagtggacacta 219 Query: 259 atgcgcatgggagaagatccaccagtcgaagtctggatagctgataatct 308 ||||| |||||||||||||| | || ||||| ||||| |||||||||| Sbjct: 220 atgcggatgggagaagatcctcttgttgaagtttggatgtctgataatct 269
>gb|AF360249.1| Arabidopsis thaliana At4g36760 mRNA sequence Length = 2168 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 199 tggacggatggacgatacttcttgcaggccattaatcaacttagcgatcggtggagactc 258 ||||| ||||| |||||||||||||| || | | || ||||||||| ||||| ||| Sbjct: 237 tggacagatggtcgatacttcttgcaagcattgcaacagcttagcgatgagtggacacta 296 Query: 259 atgcgcatgggagaagatccaccagtcgaagtctggatagctgataatct 308 ||||| |||||||||||||| | || ||||| ||||| |||||||||| Sbjct: 297 atgcggatgggagaagatcctcttgttgaagtttggatgtctgataatct 346
>emb|BX827450.1|CNS0A2CM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS57ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2162 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 199 tggacggatggacgatacttcttgcaggccattaatcaacttagcgatcggtggagactc 258 ||||| ||||| |||||||||||||| || | | || ||||||||| ||||| ||| Sbjct: 249 tggacagatggtcgatacttcttgcaagcattgcaacagcttagcgatgagtggacacta 308 Query: 259 atgcgcatgggagaagatccaccagtcgaagtctggatagctgataatct 308 ||||| |||||||||||||| | || ||||| ||||| |||||||||| Sbjct: 309 atgcggatgggagaagatcctcttgttgaagtttggatgtctgataatct 358
>gb|AY143575.1| Arabidopsis thaliana aminopeptidase P mRNA, complete cds Length = 2140 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 199 tggacggatggacgatacttcttgcaggccattaatcaacttagcgatcggtggagactc 258 ||||| ||||| |||||||||||||| || | | || ||||||||| ||||| ||| Sbjct: 217 tggacagatggtcgatacttcttgcaagcattgcaacagcttagcgatgagtggacacta 276 Query: 259 atgcgcatgggagaagatccaccagtcgaagtctggatagctgataatct 308 ||||| |||||||||||||| | || ||||| ||||| |||||||||| Sbjct: 277 atgcggatgggagaagatcctcttgttgaagtttggatgtctgataatct 326
>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2 Length = 198354 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Minus Query: 199 tggacggatggacgatacttcttgcaggccattaatcaacttagcgatcggtggagactc 258 ||||| ||||| |||||||||||||| || | | || ||||||||| ||||| ||| Sbjct: 42298 tggacagatggtcgatacttcttgcaagcattgcaacagcttagcgatgagtggacacta 42239 Query: 259 atgcgcatgggagaagatcc 278 ||||| |||||||||||||| Sbjct: 42238 atgcggatgggagaagatcc 42219
>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86 Length = 198780 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Plus Query: 199 tggacggatggacgatacttcttgcaggccattaatcaacttagcgatcggtggagactc 258 ||||| ||||| |||||||||||||| || | | || ||||||||| ||||| ||| Sbjct: 14680 tggacagatggtcgatacttcttgcaagcattgcaacagcttagcgatgagtggacacta 14739 Query: 259 atgcgcatgggagaagatcc 278 ||||| |||||||||||||| Sbjct: 14740 atgcggatgggagaagatcc 14759
>ref|XM_421751.1| PREDICTED: Gallus gallus similar to X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (LOC423886), mRNA Length = 2106 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 gatgcccaccagagcgagtac 108 ||||||||||||||||||||| Sbjct: 196 gatgcccaccagagcgagtac 216
>gb|BC065174.1| Mus musculus X-prolyl aminopeptidase (aminopeptidase P) 1, soluble, mRNA (cDNA clone MGC:90061 IMAGE:6415314), complete cds Length = 2424 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 gatgcccaccagagcgagtac 108 ||||||||||||||||||||| Sbjct: 232 gatgcccaccagagcgagtac 252
>ref|NM_133216.2| Mus musculus X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (Xpnpep1), mRNA Length = 2424 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 gatgcccaccagagcgagtac 108 ||||||||||||||||||||| Sbjct: 232 gatgcccaccagagcgagtac 252
>gb|AC003992.2| Homo sapiens BAC clone CTA-250D13 from 7, complete sequence Length = 176109 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 aacatgaaaaggctagcggca 565 ||||||||||||||||||||| Sbjct: 27871 aacatgaaaaggctagcggca 27851
>gb|AC146849.1| Pan troglodytes BAC clone RP43-163I11 from 7, complete sequence Length = 147837 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 aacatgaaaaggctagcggca 565 ||||||||||||||||||||| Sbjct: 6159 aacatgaaaaggctagcggca 6139
>dbj|AK146033.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530025F06 product:X-prolyl aminopeptidase (aminopeptidase P) 1, soluble, full insert sequence Length = 2498 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 gatgcccaccagagcgagtac 108 ||||||||||||||||||||| Sbjct: 324 gatgcccaccagagcgagtac 344
>dbj|AK149676.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530009C13 product:X-prolyl aminopeptidase (aminopeptidase P) 1, soluble, full insert sequence Length = 2459 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 gatgcccaccagagcgagtac 108 ||||||||||||||||||||| Sbjct: 283 gatgcccaccagagcgagtac 303
>dbj|AK166715.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0006J06 product:X-prolyl aminopeptidase (aminopeptidase P) 1, soluble, full insert sequence Length = 2121 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 gatgcccaccagagcgagtac 108 ||||||||||||||||||||| Sbjct: 244 gatgcccaccagagcgagtac 264
>dbj|AK169024.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920075J04 product:X-prolyl aminopeptidase (aminopeptidase P) 1, soluble, full insert sequence Length = 3235 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 gatgcccaccagagcgagtac 108 ||||||||||||||||||||| Sbjct: 170 gatgcccaccagagcgagtac 190
>gb|AF363970.1|AF363970 Mus musculus cytosolic aminopeptidase P mRNA, complete cds Length = 2250 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 gatgcccaccagagcgagtac 108 ||||||||||||||||||||| Sbjct: 284 gatgcccaccagagcgagtac 304
>dbj|AP005268.1| Pan troglodytes DNA, chromosome 7 clone:PTB-029M21, complete sequence Length = 154715 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 aacatgaaaaggctagcggca 565 ||||||||||||||||||||| Sbjct: 102786 aacatgaaaaggctagcggca 102806
>gb|L43967.2| Mycoplasma genitalium G37, complete genome Length = 580076 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 tgaagcgattattggaattga 335 ||||||||||||||||||||| Sbjct: 127290 tgaagcgattattggaattga 127310
>gb|AC163745.4| Pan troglodytes BAC clone CH251-381N15 from chromosome 7, complete sequence Length = 185876 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 aacatgaaaaggctagcggca 565 ||||||||||||||||||||| Sbjct: 152182 aacatgaaaaggctagcggca 152162
>emb|AL672250.8| Mouse DNA sequence from clone RP23-148F9 on chromosome 2, complete sequence Length = 199204 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 520 atgaaggagttaagagaaaag 540 ||||||||||||||||||||| Sbjct: 45756 atgaaggagttaagagaaaag 45736
>ref|XM_459047.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D14454g) partial mRNA Length = 252 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 ttaagagaaaagttacaaca 548 |||||||||||||||||||| Sbjct: 178 ttaagagaaaagttacaaca 197
>ref|XM_447420.1| Candida glabrata CBS138 hypothetical protein (CAGL0I03938g) partial mRNA Length = 1107 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ttggaaacatcgtcctccga 457 |||||||||||||||||||| Sbjct: 266 ttggaaacatcgtcctccga 247
>gb|AC148486.17| Medicago truncatula clone mth2-56d23, complete sequence Length = 121459 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 atgaagcgattattggaattgatt 337 ||||| |||||||||||||||||| Sbjct: 105136 atgaatcgattattggaattgatt 105113
>gb|AC137824.25| Medicago truncatula clone mth2-10l10, complete sequence Length = 114536 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 atgaagcgattattggaattgatt 337 ||||| |||||||||||||||||| Sbjct: 7195 atgaatcgattattggaattgatt 7172
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 ttaagagaaaagttacaaca 548 |||||||||||||||||||| Sbjct: 1105161 ttaagagaaaagttacaaca 1105180
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 ttggaaacatcgtcctccga 457 |||||||||||||||||||| Sbjct: 345162 ttggaaacatcgtcctccga 345181
>emb|BX569788.6| Zebrafish DNA sequence from clone CH211-161N19 in linkage group 10, complete sequence Length = 162115 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 gtgtagcacaaaagatgaag 525 |||||||||||||||||||| Sbjct: 30513 gtgtagcacaaaagatgaag 30532
>gb|AC144374.5| Gallus gallus strain White Leghorn clone xx-37d21, complete sequence Length = 141874 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 caagcatttttgaagaagaa 395 |||||||||||||||||||| Sbjct: 93957 caagcatttttgaagaagaa 93976
>gb|AC105417.1| Homo sapiens chromosome 4 clone RP11-378N18, complete sequence Length = 75994 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 515 aaaagatgaaggagttaagagaaa 538 ||||||||||||| |||||||||| Sbjct: 73609 aaaagatgaaggatttaagagaaa 73586
>gb|AY225829.1| Acosmium subelegans isolate 1 LEGCYC gene, partial cds Length = 394 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 516 aaagatgaaggagttaagagaaaa 539 |||||||||||||| ||||||||| Sbjct: 370 aaagatgaaggagtcaagagaaaa 393
>gb|AC159262.3| Mus musculus BAC clone RP24-82I20 from chromosome 8, complete sequence Length = 235024 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tttcagctttcctctgacct 425 |||||||||||||||||||| Sbjct: 20834 tttcagctttcctctgacct 20853
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcatggcgtcgcactcgccg 57 |||||||||||||||||||| Sbjct: 27346801 tcatggcgtcgcactcgccg 27346782
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 agcaagcatttttgaagaag 393 |||||||||||||||||||| Sbjct: 21418349 agcaagcatttttgaagaag 21418368
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 agcaagcatttttgaagaag 393 |||||||||||||||||||| Sbjct: 22344 agcaagcatttttgaagaag 22363
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 agcaagcatttttgaagaag 393 |||||||||||||||||||| Sbjct: 118274 agcaagcatttttgaagaag 118293
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcatggcgtcgcactcgccg 57 |||||||||||||||||||| Sbjct: 27272401 tcatggcgtcgcactcgccg 27272382
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcatggcgtcgcactcgccg 57 |||||||||||||||||||| Sbjct: 15121 tcatggcgtcgcactcgccg 15102
>gb|AC122229.4| Mus musculus BAC clone RP23-132F18 from 8, complete sequence Length = 167956 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tttcagctttcctctgacct 425 |||||||||||||||||||| Sbjct: 55335 tttcagctttcctctgacct 55354 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,546,825 Number of Sequences: 3902068 Number of extensions: 4546825 Number of successful extensions: 91336 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91083 Number of HSP's gapped (non-prelim): 243 length of query: 600 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 577 effective length of database: 17,143,297,704 effective search space: 9891682775208 effective search space used: 9891682775208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
