ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62i08 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 239 bits (610), Expect = 1e-63 Identities = 117/120 (97%), Positives = 117/120 (97%) Frame = +2 Query: 2 GAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 181 GAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS Sbjct: 10 GAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 69 Query: 182 DDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAPAFMD 361 DDQQDITRGKGI DSLFQAPTG GTHEAVLSSYEYVSQGLRKYDF NTMGGFYIAPAFMD Sbjct: 70 DDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 129
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 207 bits (528), Expect = 4e-54 Identities = 104/122 (85%), Positives = 109/122 (89%), Gaps = 2/122 (1%) Frame = +2 Query: 2 GAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD--KWKGLAYD 175 GAPASTPTNFLGKKLKKQVTSAVNYHGKSS NRF VMA E +DE + TD +WKGLAYD Sbjct: 10 GAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQDRWKGLAYD 68 Query: 176 ISDDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAPAF 355 ISDDQQDITRGKG DSLFQAPTGDGTHEAVLSSYEY+SQGLR YDF NTMGGFYIAP+F Sbjct: 69 ISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPSF 128 Query: 356 MD 361 MD Sbjct: 129 MD 130
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 170 bits (431), Expect = 7e-43 Identities = 88/126 (69%), Positives = 102/126 (80%), Gaps = 6/126 (4%) Frame = +2 Query: 2 GAPASTPT--NFLGKKLKK-QVTSAVNYHGKSSKAN-RFTVMAAENIDEKRNTD--KWKG 163 GAPASTPT +FLGKKL K QV++AV YHGKSS +N RF MAA+ +DE + TD +WKG Sbjct: 10 GAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKG 69 Query: 164 LAYDISDDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYI 343 LAYDISDDQQDITRGKG+ D+LFQAP GDGTH AVLSSY+Y+SQG + Y+F N M GFYI Sbjct: 70 LAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYI 129 Query: 344 APAFMD 361 A FMD Sbjct: 130 AKGFMD 135
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 164 bits (416), Expect = 4e-41 Identities = 87/124 (70%), Positives = 97/124 (78%), Gaps = 4/124 (3%) Frame = +2 Query: 2 GAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNTD--KWKGLA 169 GAPASTPT FLGKK+K YHG + +R VMAA+ +D+ + TD +WKGLA Sbjct: 10 GAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQTDADRWKGLA 63 Query: 170 YDISDDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAP 349 YDISDDQQDITRGKGI DSLFQAP GDGTHEA+LSSYEY+SQGLRKYDF NTM G YIAP Sbjct: 64 YDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAP 123 Query: 350 AFMD 361 AFMD Sbjct: 124 AFMD 127
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 134 bits (338), Expect = 4e-32 Identities = 71/119 (59%), Positives = 85/119 (71%) Frame = +2 Query: 5 APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 184 APAST FLGKK V + + + K+N + A D++ + D+W+GLAYD SD Sbjct: 28 APAST---FLGKK----VVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSD 80 Query: 185 DQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAPAFMD 361 DQQDITRGKG+ DS+FQAP G GTH AVLSSYEYVSQGLR+Y+ N M GFYIAPAFMD Sbjct: 81 DQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMD 139
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 133 bits (335), Expect = 9e-32 Identities = 70/120 (58%), Positives = 86/120 (71%), Gaps = 3/120 (2%) Frame = +2 Query: 11 ASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK--WKGLAYDIS 181 AS P++ FLG LKK VN +SK + ++ ++DE + TDK WKGLA+D S Sbjct: 25 ASVPSSTFLGSSLKK-----VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTS 79 Query: 182 DDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAPAFMD 361 DDQQDITRGKG DSLFQAP G GTH A++SSYEY+S GLR+Y+F N M G+YIAPAFMD Sbjct: 80 DDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMD 139
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 131 bits (330), Expect = 4e-31 Identities = 73/123 (59%), Positives = 87/123 (70%), Gaps = 3/123 (2%) Frame = +2 Query: 2 GAPAST--PTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE-NIDEKRNTDKWKGLAY 172 GA AS T F G LKK SA + SS F ++A E + D++ + DKWKGLAY Sbjct: 22 GARASLVPSTAFFGSSLKK---SAAKFPKASS--GNFKIVAQEISEDQQTDKDKWKGLAY 76 Query: 173 DISDDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAPA 352 DISDDQQDITRGKG+ D+LFQAP GTH AV+SSY+Y+SQGLR+Y+ N M GFYIAPA Sbjct: 77 DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136 Query: 353 FMD 361 FMD Sbjct: 137 FMD 139
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 131 bits (330), Expect = 4e-31 Identities = 73/123 (59%), Positives = 87/123 (70%), Gaps = 3/123 (2%) Frame = +2 Query: 2 GAPAST--PTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE-NIDEKRNTDKWKGLAY 172 GA AS T F G LKK SA + SS F ++A E + D++ + DKWKGLAY Sbjct: 22 GARASLVPSTAFFGSSLKK---SAAKFPKASS--GNFKIVAQEISEDQQTDKDKWKGLAY 76 Query: 173 DISDDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAPA 352 DISDDQQDITRGKG+ D+LFQAP GTH AV+SSY+Y+SQGLR+Y+ N M GFYIAPA Sbjct: 77 DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136 Query: 353 FMD 361 FMD Sbjct: 137 FMD 139
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 131 bits (329), Expect = 5e-31 Identities = 72/122 (59%), Positives = 84/122 (68%), Gaps = 3/122 (2%) Frame = +2 Query: 5 APASTP-TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD--KWKGLAYD 175 A S P T F GK LKK V+ ++K+ R V ++D K+ TD +WKGL D Sbjct: 23 AGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRI-VAEQIDVDPKKQTDSDRWKGLVQD 81 Query: 176 ISDDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAPAF 355 SDDQQDITRGKG+ DSLFQAPTG GTH AVL SYEYVSQGLR+Y+ N + GFYIAPAF Sbjct: 82 FSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAF 141 Query: 356 MD 361 MD Sbjct: 142 MD 143
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 129 bits (324), Expect = 2e-30 Identities = 73/124 (58%), Positives = 83/124 (66%), Gaps = 5/124 (4%) Frame = +2 Query: 5 APASTP-TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE--NIDEKRNT--DKWKGLA 169 A S P T F GK LKK V+ NR +AAE + D K+ T D+WKGL Sbjct: 23 AGTSVPSTAFFGKTLKKVYGKGVS---SPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLV 79 Query: 170 YDISDDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAP 349 D SDDQQDI RGKG+ DSLFQAPTG GTH AVL SYEYVSQGLR+Y+ NT+ GFYIAP Sbjct: 80 QDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAP 139 Query: 350 AFMD 361 +FMD Sbjct: 140 SFMD 143
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 126 bits (317), Expect = 1e-29 Identities = 71/120 (59%), Positives = 79/120 (65%), Gaps = 1/120 (0%) Frame = +2 Query: 5 APASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 181 A AS PT+ FLG LKK SS+ TV AAEN E++NTDKW LA D S Sbjct: 23 AGASVPTSGFLGSSLKKHTNVRFP---SSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFS 77 Query: 182 DDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAPAFMD 361 DDQ DI RGKG+ DSLFQAP GTH + SS+EY SQGLRKYD N +G FYIAPAFMD Sbjct: 78 DDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMD 137
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 125 bits (315), Expect = 2e-29 Identities = 67/123 (54%), Positives = 88/123 (71%), Gaps = 3/123 (2%) Frame = +2 Query: 2 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 172 G AS P++ F G LKK ++S V + K + + V A + I+E + T D+W+GLAY Sbjct: 22 GGGASGPSSAFFGTSLKKVISSRVP-NSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAY 80 Query: 173 DISDDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAPA 352 D+SDDQQDITRGKG+ DSLFQAP GTH AV+SS++Y+S GLR+Y+F N GFYIAPA Sbjct: 81 DVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPA 140 Query: 353 FMD 361 F+D Sbjct: 141 FLD 143
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 125 bits (314), Expect = 3e-29 Identities = 63/113 (55%), Positives = 79/113 (69%), Gaps = 2/113 (1%) Frame = +2 Query: 29 FLGKKLKKQVTSAVNYHGKSSK--ANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDIT 202 FLG +LK V+ +SK F ++A ++ +++ DKW+GLA+D SDDQQDIT Sbjct: 30 FLGSRLK------VSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDIT 83 Query: 203 RGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAPAFMD 361 RGKG+ D LFQAP G GTH AVLSSYEY+S GLR Y + N + GFYIAPAFMD Sbjct: 84 RGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMD 136
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 125 bits (314), Expect = 3e-29 Identities = 72/123 (58%), Positives = 85/123 (69%), Gaps = 3/123 (2%) Frame = +2 Query: 2 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 172 GA AS PT+ F G LKK V S V + K + + V A + I+E + T D+WKGLAY Sbjct: 22 GAGASAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAY 80 Query: 173 DISDDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAPA 352 DISDDQQDITRGKG+ D LFQAP GTH AV+SSYEY+S GLR+ D N GFYIAPA Sbjct: 81 DISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQLD--NIKDGFYIAPA 138 Query: 353 FMD 361 F+D Sbjct: 139 FLD 141
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 122 bits (306), Expect = 2e-28 Identities = 65/120 (54%), Positives = 79/120 (65%), Gaps = 1/120 (0%) Frame = +2 Query: 5 APASTP-TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 181 A S P T F GK LKK V+ +NR + A+ +DE + D+WKGL + S Sbjct: 23 AGTSVPSTAFFGKSLKKVYAKGVS---SPKVSNRNLRVVAQEVDETKE-DRWKGLYDNTS 78 Query: 182 DDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFXNTMGGFYIAPAFMD 361 DDQQDI RGKG+ DSLFQAPTG GTH A+++SYEYVSQ L+ Y N + GFYIAPAFMD Sbjct: 79 DDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMD 138
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 72.0 bits (175), Expect = 3e-13 Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 3/78 (3%) Frame = +2 Query: 137 KRNTDKWKGL--AYDISDDQQDITRGKGIXDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 307 ++ +W+ + D SDDQQDITRG+ + D LFQ G GTH AVLSS EY+SQ + Sbjct: 37 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94 Query: 308 YDFXNTMGGFYIAPAFMD 361 F N GFYI+PAF+D Sbjct: 95 ASFNNIEDGFYISPAFLD 112
>PTR2_CANAL (P46030) Peptide transporter PTR2| Length = 623 Score = 31.2 bits (69), Expect = 0.65 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%) Frame = -2 Query: 252 PSPVGAWKSESXMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 106 P+P+ AWK+ S CW + E++Y R ++FL S FSAA+++ Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546
>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae| Length = 209 Score = 29.6 bits (65), Expect = 1.9 Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Frame = +2 Query: 5 APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 184 +PA+ P+ +G+K++ V+ ++ G K++ + + KR T ++ G + +SD Sbjct: 35 SPAADPSLMIGRKVEVPVS---DFTGNFRKSSTMVIFRVKECTGKRCTTEFIG--HKVSD 89 Query: 185 D--QQDITRGKGIXDSLFQAPTGDG 253 D ++ + R K D + + T DG Sbjct: 90 DTIRRMVRRRKERIDIIMPSKTKDG 114
>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC| 3.1.3.48) (Protein tyrosine phosphatase PTP-BL) (Protein-tyrosine phosphatase RIP) (protein tyrosine phosphatase DPZPTP) (PTP36) Length = 2453 Score = 29.3 bits (64), Expect = 2.5 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +2 Query: 173 DISDDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYVSQGLRK 307 D S +D RGKG+ THEA LS +V++GL K Sbjct: 195 DRSQAIRDRLRGKGLPTGRSSTSDALDTHEAPLSQQTFVNKGLSK 239
>DHOM_HELPJ (Q9ZL20) Homoserine dehydrogenase (EC 1.1.1.3) (HDH)| Length = 421 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +2 Query: 140 RNTDKWKGLAYDISDDQQDITRGKGI 217 R+ K KG A++ISDD + + KGI Sbjct: 46 RDVKKHKGYAFEISDDLESVIEDKGI 71
>DDX18_MOUSE (Q8K363) ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD box| protein 18) Length = 660 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -1 Query: 94 LGALAMVVHGRGHLLLELLPEEVG 23 +G A ++GRGH LL L PEE+G Sbjct: 503 VGRTARGLNGRGHALLILRPEELG 526
>DDX18_HUMAN (Q9NVP1) ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD box| protein 18) (Myc-regulated DEAD box protein) (MrDb) Length = 670 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -1 Query: 94 LGALAMVVHGRGHLLLELLPEEVG 23 +G A ++GRGH LL L PEE+G Sbjct: 513 VGRTARGLNGRGHALLILRPEELG 536
>RS7_PSYAR (Q4FQG4) 30S ribosomal protein S7| Length = 157 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 2/76 (2%) Frame = +2 Query: 20 PTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDI 199 P G + + + V HGK S A R A E + +KRN + D+ ++ + + Sbjct: 14 PDPKFGSQTVAKFINHVMSHGKKSTAERIVYGALETVSQKRNIEDPVSFFEDVLENVRPM 73 Query: 200 --TRGKGIXDSLFQAP 241 + + + + +Q P Sbjct: 74 VEVKARRVGGATYQVP 89
>ALMS1_HUMAN (Q8TCU4) Alstrom syndrome protein 1| Length = 4167 Score = 27.7 bits (60), Expect = 7.2 Identities = 18/63 (28%), Positives = 30/63 (47%) Frame = -2 Query: 297 PWLTYS*ELXTASWVPSPVGAWKSESXMPFPLVMSCWSSEISYARPFHLSVFLFSSMFSA 118 PWL+ EL ++VP + S S MP P M +++ I+++ H SS+ Sbjct: 2677 PWLS---ELVEPAFVPPKEVDFHSSSQMPSPEPMKKFTTSITFSSHRHSKCISNSSVVKV 2733 Query: 117 AMT 109 +T Sbjct: 2734 GVT 2736
>ATP6_ACACA (Q37385) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)| Length = 247 Score = 27.7 bits (60), Expect = 7.2 Identities = 21/60 (35%), Positives = 31/60 (51%) Frame = -2 Query: 273 LXTASWVPSPVGAWKSESXMPFPLVMSCWSSEISYARPFHLSVFLFSSMFSAAMTVNLLA 94 L S VP P+ +PF +V+ S I RPF LSV LF++M + +N+L+ Sbjct: 144 LFVPSGVPKPL--------IPFLVVIEVVSYLI---RPFSLSVRLFANMLAGHTLLNILS 192
>KADA_METTL (P43410) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)| Length = 192 Score = 27.3 bits (59), Expect = 9.4 Identities = 23/96 (23%), Positives = 39/96 (40%) Frame = +2 Query: 2 GAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 181 G P T K ++K +NY + F V EN+ E R D+ + L D Sbjct: 10 GVPGVGGTTITQKAMEKLSEEGINYKMVNFGTVMFEVAQEENLVEDR--DQMRKLDPDTQ 67 Query: 182 DDQQDITRGKGIXDSLFQAPTGDGTHEAVLSSYEYV 289 Q + G+ I + + ++P TH + + Y+ Sbjct: 68 KRIQKLA-GRKIAEMVKESPVVVDTHSTIKTPKGYL 102
>SFRS8_HUMAN (Q12872) Splicing factor, arginine/serine-rich 8 (Suppressor of| white apricot protein homolog) Length = 951 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +2 Query: 83 KSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIXDSLF 232 K+ K R+TV+A DEK+ + G++ D ++D D G + SLF Sbjct: 258 KAMKEGRYTVLAENKSDEKKKS----GVSSD-NEDDDDEEDGNYLHPSLF 302
>NORM_OCEIH (Q8CUL5) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 447 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 10/57 (17%) Frame = -2 Query: 258 WVPSPVGAWKSESXMPF----------PLVMSCWSSEISYARPFHLSVFLFSSMFSA 118 W+ S + + PF P +S W+ ++ P L++F +S+FSA Sbjct: 205 WIISGISIFMIHRVYPFHSYKVFQKILPPTLSYWADQLKIGLPIGLAIFFETSIFSA 261
>LAR_CAEEL (Q9BMN8) Tyrosine-protein phosphatase Lar-like precursor (EC| 3.1.3.48) (Protein-tyrosine phosphate 3) Length = 2200 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = +2 Query: 59 TSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIXD 223 T+ V + +S KA+ F V + +T+KWK L +S D+++ R + D Sbjct: 1071 TAVVQWDFESQKADSFVVKYMHEPGNRMDTEKWKQLPV-VSIDKENPKRFAVVSD 1124
>RT107_YEAST (P38850) Regulator of Ty1 transposition protein 107| Length = 1070 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/53 (24%), Positives = 27/53 (50%) Frame = +2 Query: 83 KSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIXDSLFQAP 241 K + + +++ E++ K++TDK+ L +SD+ I K +S + P Sbjct: 688 KQGEESTGKLISTEDVTSKKDTDKFSHLFEGLSDNDDHINDEKPAVNSKYTTP 740 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,589,439 Number of Sequences: 219361 Number of extensions: 683939 Number of successful extensions: 2307 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 2252 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2295 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
