ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62h20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_426816.1| PREDICTED: Gallus gallus similar to nucleoporin... 46 0.14
2gb|AC133096.3| Mus musculus BAC clone RP23-271C13 from chromosom... 44 0.54
3gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.54
4gb|AY693379.1| Musa acuminata putative receptor-like protein kin... 42 2.1
5gb|AC096781.6| Oryza sativa chromosome 10 BAC OSJNBa0013H08 geno... 42 2.1
6ref|XM_776393.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.1
7ref|XM_778692.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.1
8gb|AE006466.1| Homo sapiens 16p13.3 sequence section 5 of 8 42 2.1
9gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 gen... 42 2.1
10gb|AY081193.1| Homo sapiens somatostatin receptor subtype 5 gene... 42 2.1
11gb|AC090064.3| Homo sapiens chromosome 5 clone CTB-43C3, complet... 42 2.1
12gb|AC011407.6| Homo sapiens chromosome 5 clone CTB-54I1, complet... 42 2.1
13dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
14gb|AC009041.10| Homo sapiens chromosome 16 clone RP11-161M6, com... 42 2.1
15gb|AC017004.4| Homo sapiens BAC clone RP11-88C6 from 2, complete... 42 2.1
16dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.1
17gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
18emb|AL807777.6| Mouse DNA sequence from clone RP23-392C8 on chro... 42 2.1
19emb|AL031706.17|HS305F3 Human DNA sequence from clone LA16-305F3... 42 2.1
20ref|XM_450681.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.4
21ref|NM_192784.1| Oryza sativa (japonica cultivar-group), predic... 40 8.4
22ref|XM_463364.1| Oryza sativa (japonica cultivar-group), predic... 40 8.4
23gb|AF022985.2| Caenorhabditis elegans cosmid T15B7, complete seq... 40 8.4
24gb|BC067052.1| Mus musculus CXXC finger 4, mRNA (cDNA clone MGC:... 40 8.4
25ref|XM_363258.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.4
26gb|BC016400.1| Mus musculus heat shock protein 1 (chaperonin), m... 40 8.4
27gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
28ref|XM_844202.1| PREDICTED: Canis familiaris similar to calcipre... 40 8.4
29gb|AC122889.3| Mus musculus BAC clone RP23-93M3 from chromosome ... 40 8.4
30gb|AC122336.4| Mus musculus BAC clone RP23-351K21 from chromosom... 40 8.4
31ref|XM_723354.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 8.4
32gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 8.4
33gb|CP000088.1| Thermobifida fusca YX, complete genome 40 8.4
34gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 8.4
35dbj|AK143882.1| Mus musculus adult male kidney cDNA, RIKEN full-... 40 8.4
36gb|AC040166.6| Homo sapiens chromosome 16 clone RP11-44I4, compl... 40 8.4
37dbj|AK146831.1| Mus musculus 17 days embryo heart cDNA, RIKEN fu... 40 8.4
38ref|NM_010477.2| Mus musculus heat shock protein 1 (chaperonin) ... 40 8.4
39gb|S70834.1| luteinizing hormone beta-subunit [Coturnix coturnix... 40 8.4
40dbj|AK088844.1| Mus musculus 2 days neonate thymus thymic cells ... 40 8.4
41gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H... 40 8.4
42ref|NM_072337.2| Caenorhabditis elegans T15B7.3 (collagen) mRNA,... 40 8.4
43dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
44dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
45dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
46dbj|AK189577.1| Mus musculus cDNA, clone:Y0G0149K17, strand:plus... 40 8.4
47dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
48dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
49gb|AC108391.14| Mus musculus chromosome 1, clone RP23-16N14, com... 40 8.4
50dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
51dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
52gb|AC153792.4| Mus musculus BAC clone RP23-435D23 from 7, comple... 40 8.4
53emb|CR854847.7| Zebrafish DNA sequence from clone DKEY-266L9 in ... 40 8.4
54gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 8.4
55dbj|D12470.1|STMGASP S. fradiae DNA for glutamic acid-specific p... 40 8.4 
>ref|XM_426816.1| PREDICTED: Gallus gallus similar to nucleoporin like 2;
           nucleoporin-like protein 1; H_RG271G13.9 (LOC429260),
           partial mRNA
          Length = 1684

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 130 ggacgccgtggccgggctgcgcggcgg 156
           |||||||||||| ||||||||||||||
Sbjct: 374 ggacgccgtggcggggctgcgcggcgg 400
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>gb|AC133096.3| Mus musculus BAC clone RP23-271C13 from chromosome 1, complete sequence
          Length = 195512

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 394    gatgaaatcacatgtggtttct 415
              ||||||||||||||||||||||
Sbjct: 116240 gatgaaatcacatgtggtttct 116261
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 133     cgccgtggccgggctgcgcggc 154
               ||||||||||||||||||||||
Sbjct: 1742225 cgccgtggccgggctgcgcggc 1742204
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>gb|AY693379.1| Musa acuminata putative receptor-like protein kinase 2 gene,
           partial cds
          Length = 549

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 483 ggtggcggtgaagaagttgac 503
           |||||||||||||||||||||
Sbjct: 42  ggtggcggtgaagaagttgac 62
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>gb|AC096781.6| Oryza sativa chromosome 10 BAC OSJNBa0013H08 genomic sequence,
            complete sequence
          Length = 58293

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 220  atgtctcttctaatttcctcctgaa 244
            ||||||| |||||||||||||||||
Sbjct: 7133 atgtctcctctaatttcctcctgaa 7157
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>ref|XM_776393.1| PREDICTED: Strongylocentrotus purpuratus similar to angiogenic
           factor VG5Q (LOC576046), mRNA
          Length = 924

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 336 ggagtccatggtcatcgatga 356
           |||||||||||||||||||||
Sbjct: 96  ggagtccatggtcatcgatga 116
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>ref|XM_778692.1| PREDICTED: Strongylocentrotus purpuratus similar to angiogenic factor
            VG5Q (LOC578529), mRNA
          Length = 2142

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 336  ggagtccatggtcatcgatga 356
            |||||||||||||||||||||
Sbjct: 1473 ggagtccatggtcatcgatga 1493
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>gb|AE006466.1| Homo sapiens 16p13.3 sequence section 5 of 8
          Length = 265786

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 21   gctctcctgccgccgccgggg 41
            |||||||||||||||||||||
Sbjct: 8484 gctctcctgccgccgccgggg 8504
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>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence,
            complete sequence
          Length = 149978

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  atgtctcttctaatttcctcctgaa 244
            ||||||| |||||||||||||||||
Sbjct: 2962 atgtctcctctaatttcctcctgaa 2938
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>gb|AY081193.1| Homo sapiens somatostatin receptor subtype 5 gene, exons 1a and 1 and
            complete cds
          Length = 10494

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 21   gctctcctgccgccgccgggg 41
            |||||||||||||||||||||
Sbjct: 1979 gctctcctgccgccgccgggg 1999
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>gb|AC090064.3| Homo sapiens chromosome 5 clone CTB-43C3, complete sequence
          Length = 124882

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 395    atgaaatcacatgtggtttct 415
              |||||||||||||||||||||
Sbjct: 112947 atgaaatcacatgtggtttct 112967
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>gb|AC011407.6| Homo sapiens chromosome 5 clone CTB-54I1, complete sequence
          Length = 240957

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 395   atgaaatcacatgtggtttct 415
             |||||||||||||||||||||
Sbjct: 87085 atgaaatcacatgtggtttct 87105
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 220      atgtctcttctaatttcctcctgaa 244
                ||||||| |||||||||||||||||
Sbjct: 16384863 atgtctcctctaatttcctcctgaa 16384839
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>gb|AC009041.10| Homo sapiens chromosome 16 clone RP11-161M6, complete sequence
          Length = 162342

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 21     gctctcctgccgccgccgggg 41
              |||||||||||||||||||||
Sbjct: 143343 gctctcctgccgccgccgggg 143363
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>gb|AC017004.4| Homo sapiens BAC clone RP11-88C6 from 2, complete sequence
          Length = 184850

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 392    tggatgaaatcacatgtggtt 412
              |||||||||||||||||||||
Sbjct: 134666 tggatgaaatcacatgtggtt 134686
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 128    gaggacgccgtggccgggctgcgcg 152
              ||||| |||||||||||||||||||
Sbjct: 188572 gaggaggccgtggccgggctgcgcg 188596
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 220      atgtctcttctaatttcctcctgaa 244
                ||||||| |||||||||||||||||
Sbjct: 16393104 atgtctcctctaatttcctcctgaa 16393080
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>emb|AL807777.6| Mouse DNA sequence from clone RP23-392C8 on chromosome X, complete
              sequence
          Length = 189607

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 201    gaggggttactgaaaagtgatgtct 225
              |||||||||||| ||||||||||||
Sbjct: 161705 gaggggttactgtaaagtgatgtct 161729
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>emb|AL031706.17|HS305F3 Human DNA sequence from clone LA16-305F3 on chromosome 16. Contains
            two putative CpG islands, complete sequence
          Length = 13012

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 21   gctctcctgccgccgccgggg 41
            |||||||||||||||||||||
Sbjct: 7099 gctctcctgccgccgccgggg 7119
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>ref|XM_450681.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1206

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 gccgggctgcgcggcggctg 159
           ||||||||||||||||||||
Sbjct: 166 gccgggctgcgcggcggctg 185
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>ref|NM_192784.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1341

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 125 caggaggacgccgtggccgggctgcgcg 152
           |||||||||||||||||| || ||||||
Sbjct: 217 caggaggacgccgtggccaggatgcgcg 244
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>ref|XM_463364.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1404

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tggaggacgccgtcgtcgcc 193
           ||||||||||||||||||||
Sbjct: 485 tggaggacgccgtcgtcgcc 504
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>gb|AF022985.2| Caenorhabditis elegans cosmid T15B7, complete sequence
          Length = 36752

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     gctcgccgccgtgttgccgt 20
             ||||||||||||||||||||
Sbjct: 25989 gctcgccgccgtgttgccgt 26008
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>gb|BC067052.1| Mus musculus CXXC finger 4, mRNA (cDNA clone MGC:86040
           IMAGE:30619087), complete cds
          Length = 1313

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 25  tcctgccgccgccggggaag 44
           ||||||||||||||||||||
Sbjct: 554 tcctgccgccgccggggaag 535
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>ref|XM_363258.1| Magnaporthe grisea 70-15 hypothetical protein (MG01184.4) partial
           mRNA
          Length = 3306

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 181 cgccgtcgtcgccaaacgcc 200
           ||||||||||||||||||||
Sbjct: 62  cgccgtcgtcgccaaacgcc 81
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>gb|BC016400.1| Mus musculus heat shock protein 1 (chaperonin), mRNA (cDNA clone
          MGC:6709 IMAGE:3585270), complete cds
          Length = 2232

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 18 cgtgctctcctgccgccgcc 37
          ||||||||||||||||||||
Sbjct: 15 cgtgctctcctgccgccgcc 34
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>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07,
              complete sequence
          Length = 159932

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 488    cggtgaagaagttgaccaac 507
              ||||||||||||||||||||
Sbjct: 116663 cggtgaagaagttgaccaac 116644
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>ref|XM_844202.1| PREDICTED: Canis familiaris similar to calcipressin 1 isoform c,
           transcript variant 1 (LOC607887), mRNA
          Length = 2453

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 127 ggaggacgccgtggccgggc 146
           ||||||||||||||||||||
Sbjct: 93  ggaggacgccgtggccgggc 112
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>gb|AC122889.3| Mus musculus BAC clone RP23-93M3 from chromosome 1, complete sequence
          Length = 125681

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     cgtgctctcctgccgccgcc 37
              ||||||||||||||||||||
Sbjct: 123659 cgtgctctcctgccgccgcc 123678
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>gb|AC122336.4| Mus musculus BAC clone RP23-351K21 from chromosome 7, complete sequence
          Length = 189296

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   tgcgcggcggctgtgctctc 166
             ||||||||||||||||||||
Sbjct: 20516 tgcgcggcggctgtgctctc 20497
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>ref|XM_723354.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00094)
            partial mRNA
          Length = 9000

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 374  cactaccattatcacttttg 393
            ||||||||||||||||||||
Sbjct: 7300 cactaccattatcacttttg 7281
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 478     gtgacggtggcggtgaagaagttg 501
               ||||||| ||||||||||||||||
Sbjct: 3321463 gtgacggcggcggtgaagaagttg 3321440
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 136     cgtggccgggctgcgcggcg 155
               ||||||||||||||||||||
Sbjct: 1402439 cgtggccgggctgcgcggcg 1402458
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     gaggacgccgtcgtcgccaa 195
               ||||||||||||||||||||
Sbjct: 3995635 gaggacgccgtcgtcgccaa 3995616
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>dbj|AK143882.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
          library, clone:F520001E04 product:heat shock protein 1
          (chaperonin), full insert sequence
          Length = 2235

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 18 cgtgctctcctgccgccgcc 37
          ||||||||||||||||||||
Sbjct: 34 cgtgctctcctgccgccgcc 53
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>gb|AC040166.6| Homo sapiens chromosome 16 clone RP11-44I4, complete sequence
          Length = 136356

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   atgtggtttctctgaaaagc 424
             ||||||||||||||||||||
Sbjct: 34795 atgtggtttctctgaaaagc 34814
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>dbj|AK146831.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:I920062F22 product:heat shock protein 1
           (chaperonin), full insert sequence
          Length = 2283

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  cgtgctctcctgccgccgcc 37
           ||||||||||||||||||||
Sbjct: 81  cgtgctctcctgccgccgcc 100
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>ref|NM_010477.2| Mus musculus heat shock protein 1 (chaperonin) (Hspd1), mRNA
          Length = 2246

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 18 cgtgctctcctgccgccgcc 37
          ||||||||||||||||||||
Sbjct: 43 cgtgctctcctgccgccgcc 62
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>gb|S70834.1| luteinizing hormone beta-subunit [Coturnix coturnix=Japanese
           quails, ssp. japonica, adenohypophyseal, mRNA, 724 nt]
          Length = 724

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 475 aatgtgacggtggcggtgaagaag 498
           |||||||||||||||||| |||||
Sbjct: 187 aatgtgacggtggcggtggagaag 210
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>dbj|AK088844.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
          full-length enriched library, clone:E430028C20
          product:heat shock protein, 60 kDa, full insert
          sequence
          Length = 2246

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 18 cgtgctctcctgccgccgcc 37
          ||||||||||||||||||||
Sbjct: 43 cgtgctctcctgccgccgcc 62
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>gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H23, complete sequence
          Length = 159611

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    atgtggtttctctgaaaagc 424
              ||||||||||||||||||||
Sbjct: 158908 atgtggtttctctgaaaagc 158927
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>ref|NM_072337.2| Caenorhabditis elegans T15B7.3 (collagen) mRNA, complete cds
          Length = 996

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 1   gctcgccgccgtgttgccgt 20
           ||||||||||||||||||||
Sbjct: 904 gctcgccgccgtgttgccgt 923
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 140      gccgggctgcgcggcggctg 159
                ||||||||||||||||||||
Sbjct: 12198350 gccgggctgcgcggcggctg 12198369
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 488      cggtgaagaagttgaccaac 507
                ||||||||||||||||||||
Sbjct: 17586858 cggtgaagaagttgaccaac 17586839
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 125      caggaggacgccgtggccgggctgcgcg 152
                |||||||||||||||||| || ||||||
Sbjct: 24392651 caggaggacgccgtggccaggatgcgcg 24392624



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 174      tggaggacgccgtcgtcgcc 193
                ||||||||||||||||||||
Sbjct: 22614581 tggaggacgccgtcgtcgcc 22614600
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>dbj|AK189577.1| Mus musculus cDNA, clone:Y0G0149K17, strand:plus,
          reference:ENSEMBL:Mouse-Transcript-
          ENST:ENSMUST00000027123, based on BLAT search
          Length = 96

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 18 cgtgctctcctgccgccgcc 37
          ||||||||||||||||||||
Sbjct: 22 cgtgctctcctgccgccgcc 41
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>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0410E01
          Length = 166753

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 125    caggaggacgccgtggccgggctgcgcg 152
              |||||||||||||||||| || ||||||
Sbjct: 138555 caggaggacgccgtggccaggatgcgcg 138528
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>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1097D05
          Length = 144879

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    tggaggacgccgtcgtcgcc 193
              ||||||||||||||||||||
Sbjct: 130318 tggaggacgccgtcgtcgcc 130337
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>gb|AC108391.14| Mus musculus chromosome 1, clone RP23-16N14, complete sequence
          Length = 257730

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     cgtgctctcctgccgccgcc 37
              ||||||||||||||||||||
Sbjct: 210376 cgtgctctcctgccgccgcc 210357
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>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1759_F09
          Length = 149501

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    gccgggctgcgcggcggctg 159
              ||||||||||||||||||||
Sbjct: 109809 gccgggctgcgcggcggctg 109828
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>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0564H06
          Length = 146823

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    gccgggctgcgcggcggctg 159
              ||||||||||||||||||||
Sbjct: 132729 gccgggctgcgcggcggctg 132748
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>gb|AC153792.4| Mus musculus BAC clone RP23-435D23 from 7, complete sequence
          Length = 224041

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   tgcgcggcggctgtgctctc 166
             ||||||||||||||||||||
Sbjct: 95107 tgcgcggcggctgtgctctc 95088
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>emb|CR854847.7| Zebrafish DNA sequence from clone DKEY-266L9 in linkage group 11,
             complete sequence
          Length = 48855

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   tttctctgaaaagcaggaaa 430
             ||||||||||||||||||||
Sbjct: 39503 tttctctgaaaagcaggaaa 39522
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 125     caggaggacgccgtggccgg 144
               ||||||||||||||||||||
Sbjct: 2422627 caggaggacgccgtggccgg 2422608
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>dbj|D12470.1|STMGASP S. fradiae DNA for glutamic acid-specific protease, complete cds
          Length = 2064

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 cggaagggggcggcgtcagg 128
           ||||||||||||||||||||
Sbjct: 283 cggaagggggcggcgtcagg 264


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,696,013
Number of Sequences: 3902068
Number of extensions: 5696013
Number of successful extensions: 101396
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100503
Number of HSP's gapped (non-prelim): 893
length of query: 615
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 592
effective length of database: 17,143,297,704
effective search space: 10148832240768
effective search space used: 10148832240768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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