ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62h18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY224493.1| Oryza sativa (japonica cultivar-group) isolate 30868 unknown mRNA Length = 1503 Score = 759 bits (383), Expect = 0.0 Identities = 569/631 (90%) Strand = Plus / Plus Query: 16 gagatatcaaagaggctctctctccctttaggttccaccctagacaggtatgatggcttg 75 ||||||||||| ||||| ||||| ||||| || || || |||||||||||||||||||| Sbjct: 727 gagatatcaaaaaggctatctcttcctttgggatctactctagacaggtatgatggctta 786 Query: 76 cttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtccactg 135 ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 787 cttttttcggtgggaggaaatggaagatcatatgttgttattcttgagactggtccgctg 846 Query: 136 gctgacacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggcttttgt 195 ||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 847 gctgacacctcccagagcaagaagtactttgctcggatgactacaaaagtaggattttgt 906 Query: 196 agggtaagagtacctttttcggctttccgccctgtaaaaccagaagatcctcccctagac 255 ||||| || ||||| ||||| ||||| || || ||||| || ||||||||||||||||| Sbjct: 907 agggtgagggtaccattttcagcttttcggccagtaaaccctcaagatcctcccctagac 966 Query: 256 ccttttcttgtgcataccttcacaattaggtttgaaccaaaaagacagagacctggtgat 315 ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| Sbjct: 967 ccttttcttgtgcatacactaacaattaggtttgaacccaaaagacagagacctggtgat 1026 Query: 316 ggaacacaaggtgccactgaccccagaaattttgagctgatactggagtacatcaaagca 375 ||| | ||| |||| ||||||||||||||||||||||| ||| |||| ||||||||||| Sbjct: 1027 ggatctcaaagtgctactgaccccagaaattttgagcttatattggaatacatcaaagct 1086 Query: 376 ttacctaccggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaa 435 || ||||| |||||||||||||||||||| |||||||||||| ||||||| || |||||| Sbjct: 1087 ttgcctactggtcaagaaacagacttcattctggtctcatgctcaggttctgggattgaa 1146 Query: 436 cctaacagaagagaacaagttctcaaagcaaagaaggctggggaggatgcgctaagaagg 495 |||||||||||||||||||| ||||||||||| |||||||| |||||||| | |||||| Sbjct: 1147 cctaacagaagagaacaagtcctcaaagcaaaaaaggctggagaggatgcattgagaagg 1206 Query: 496 tcaggccttggatacacaattgtacggcctggtccgctgcaggaagaacctggcggtcag 555 |||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||| Sbjct: 1207 tcaggccttggatacacaatagtacgccctggtccactgcaggaagaacctggtggtcag 1266 Query: 556 cgtgcactgatctttgatcaaggaaacagaatctctcaggctatcagctgtgcggatgta 615 |||||| |||||||||||||||| ||||||||||| |||| |||||| || || |||||| Sbjct: 1267 cgtgcattgatctttgatcaagggaacagaatctcgcagggtatcagttgcgccgatgta 1326 Query: 616 gcagatatctgtgtcaaagcattgcatgatt 646 |||||||| |||||||||||||||||||||| Sbjct: 1327 gcagatatttgtgtcaaagcattgcatgatt 1357
>dbj|AK120907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031L08, full insert sequence Length = 2197 Score = 759 bits (383), Expect = 0.0 Identities = 569/631 (90%) Strand = Plus / Plus Query: 16 gagatatcaaagaggctctctctccctttaggttccaccctagacaggtatgatggcttg 75 ||||||||||| ||||| ||||| ||||| || || || |||||||||||||||||||| Sbjct: 1221 gagatatcaaaaaggctatctcttcctttgggatctactctagacaggtatgatggctta 1280 Query: 76 cttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtccactg 135 ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1281 cttttttcggtgggaggaaatggaagatcatatgttgttattcttgagactggtccgctg 1340 Query: 136 gctgacacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggcttttgt 195 ||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 1341 gctgacacctcccagagcaagaagtactttgctcggatgactacaaaagtaggattttgt 1400 Query: 196 agggtaagagtacctttttcggctttccgccctgtaaaaccagaagatcctcccctagac 255 ||||| || ||||| ||||| ||||| || || ||||| || ||||||||||||||||| Sbjct: 1401 agggtgagggtaccattttcagcttttcggccagtaaaccctcaagatcctcccctagac 1460 Query: 256 ccttttcttgtgcataccttcacaattaggtttgaaccaaaaagacagagacctggtgat 315 ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| Sbjct: 1461 ccttttcttgtgcatacactaacaattaggtttgaacccaaaagacagagacctggtgat 1520 Query: 316 ggaacacaaggtgccactgaccccagaaattttgagctgatactggagtacatcaaagca 375 ||| | ||| |||| ||||||||||||||||||||||| ||| |||| ||||||||||| Sbjct: 1521 ggatctcaaagtgctactgaccccagaaattttgagcttatattggaatacatcaaagct 1580 Query: 376 ttacctaccggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaa 435 || ||||| |||||||||||||||||||| |||||||||||| ||||||| || |||||| Sbjct: 1581 ttgcctactggtcaagaaacagacttcattctggtctcatgctcaggttctgggattgaa 1640 Query: 436 cctaacagaagagaacaagttctcaaagcaaagaaggctggggaggatgcgctaagaagg 495 |||||||||||||||||||| ||||||||||| |||||||| |||||||| | |||||| Sbjct: 1641 cctaacagaagagaacaagtcctcaaagcaaaaaaggctggagaggatgcattgagaagg 1700 Query: 496 tcaggccttggatacacaattgtacggcctggtccgctgcaggaagaacctggcggtcag 555 |||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||| Sbjct: 1701 tcaggccttggatacacaatagtacgccctggtccactgcaggaagaacctggtggtcag 1760 Query: 556 cgtgcactgatctttgatcaaggaaacagaatctctcaggctatcagctgtgcggatgta 615 |||||| |||||||||||||||| ||||||||||| |||| |||||| || || |||||| Sbjct: 1761 cgtgcattgatctttgatcaagggaacagaatctcgcagggtatcagttgcgccgatgta 1820 Query: 616 gcagatatctgtgtcaaagcattgcatgatt 646 |||||||| |||||||||||||||||||||| Sbjct: 1821 gcagatatttgtgtcaaagcattgcatgatt 1851
>ref|XM_464065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1797 Score = 474 bits (239), Expect = e-130 Identities = 512/603 (84%) Strand = Plus / Plus Query: 44 taggttccaccctagacaggtatgatggcttgcttctttcagtgggtggaaatggaagat 103 ||||||||||||||||||| || || ||||| ||||| || ||||||||||||||||||| Sbjct: 1049 taggttccaccctagacagatacgacggcttacttctatccgtgggtggaaatggaagat 1108 Query: 104 catatgttgttattcttgagactggtccactggctgacacctcgcagagtaagaagtatt 163 |||||||| | || ||||||||||||||||| ||||||||||| ||||| ||||| |||| Sbjct: 1109 catatgttatcatccttgagactggtccactagctgacacctcacagagcaagaaatatt 1168 Query: 164 ttgctcggatgactacaaaagtaggcttttgtagggtaagagtacctttttcggctttcc 223 |||||||||||| || |||||||| ||||| ||||| ||||| || || || | |||| Sbjct: 1169 ttgctcggatgaacactaaagtagggttttgcagggtgagagtgccgttctcagatttca 1228 Query: 224 gccctgtaaaaccagaagatcctcccctagacccttttcttgtgcataccttcacaatta 283 | || || || ||| | || ||||| || ||||||||||||||||| || || || || | Sbjct: 1229 ggccagtgaacccacaggaccctcctcttgacccttttcttgtgcacacattaaccataa 1288 Query: 284 ggtttgaaccaaaaagacagagacctggtgatggaacacaaggtgccactgaccccagaa 343 |||||||||| |||| ||||||||||||||| | ||||| || | |||||| |||| Sbjct: 1289 ggtttgaacccaaaaaacagagacctggtgactcgtctcaaggagctagtgacccaagaa 1348 Query: 344 attttgagctgatactggagtacatcaaagcattacctaccggtcaagaaacagacttca 403 |||| |||| ||| |||| | || ||||| ||||||| ||||||||||||||| | Sbjct: 1349 atttccagcttataatggaatttataaaagctctacctactggtcaagaaacagacattg 1408 Query: 404 tactggtctcatgcacaggttccggaattgaacctaacagaagagaacaagttctcaaag 463 | |||| ||||||||||| || ||||| ||||||||||||||||||||||| ||||||| Sbjct: 1409 ttttggtttcatgcacaggctctggaatcgaacctaacagaagagaacaagtcctcaaag 1468 Query: 464 caaagaaggctggggaggatgcgctaagaaggtcaggccttggatacacaattgtacggc 523 ||||||||||||| |||||||| || || || || ||||| ||||| ||||||||| | | Sbjct: 1469 caaagaaggctggagaggatgcactgaggagatccggcctcggatatacaattgtatgcc 1528 Query: 524 ctggtccgctgcaggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaaca 583 | ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1529 caggtcctctgcaggaagaacctggcggtcagcgtgctctgatctttgatcaagggaaca 1588 Query: 584 gaatctctcaggctatcagctgtgcggatgtagcagatatctgtgtcaaagcattgcatg 643 |||||||||||| |||||||||||| || |||||||||||||||||||| |||||||| | Sbjct: 1589 gaatctctcagggtatcagctgtgccgacgtagcagatatctgtgtcaaggcattgcacg 1648 Query: 644 att 646 ||| Sbjct: 1649 att 1651
>gb|AY110583.1| Zea mays CL25181_-1 mRNA sequence Length = 594 Score = 272 bits (137), Expect = 1e-69 Identities = 245/281 (87%) Strand = Plus / Minus Query: 366 catcaaagcattacctaccggtcaagaaacagacttcatactggtctcatgcacaggttc 425 |||||| || |||||||| ||||||||||||||||||||| |||| ||||| ||||||| Sbjct: 593 catcaaggctttacctactggtcaagaaacagacttcatattggtgtcatgttcaggttc 534 Query: 426 cggaattgaacctaacagaagagaacaagttctcaaagcaaagaaggctggggaggatgc 485 || |||||| |||||||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 533 tgggattgaatctaacagaagagaacaagttctcaaagccaagaaggctggagaagatgc 474 Query: 486 gctaagaaggtcaggccttggatacacaattgtacggcctggtccgctgcaggaagaacc 545 || | ||||||||||||||||| ||||| || || || ||||| |||||||||||||| Sbjct: 473 actgcggaggtcaggccttggatatacaatcgtgcgcccgggtcctctgcaggaagaacc 414 Query: 546 tggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcaggctatcagctg 605 ||| || ||||| || |||||||| |||||||| ||||||||||| |||| ||||||||| Sbjct: 413 tggtggccagcgcgcgctgatcttcgatcaagggaacagaatctcccagggtatcagctg 354 Query: 606 tgcggatgtagcagatatctgtgtcaaagcattgcatgatt 646 ||| ||||| || |||||||||||||| ||| ||||||||| Sbjct: 353 tgctgatgtggctgatatctgtgtcaaggcactgcatgatt 313
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 212 bits (107), Expect = 1e-51 Identities = 134/143 (93%) Strand = Plus / Minus Query: 61 aggtatgatggcttgcttctttcagtgggtggaaatggaagatcatatgttgttattctt 120 |||||||||||||| ||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 29248671 aggtatgatggcttacttttttcggtgggaggaaatggaagatcatatgttgttattctt 29248612 Query: 121 gagactggtccactggctgacacctcgcagagtaagaagtattttgctcggatgactaca 180 ||||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 29248611 gagactggtccgctggctgacacctcccagagcaagaagtactttgctcggatgactaca 29248552 Query: 181 aaagtaggcttttgtagggtaag 203 |||||||| |||||||||||||| Sbjct: 29248551 aaagtaggattttgtagggtaag 29248529 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 385 ggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaacctaacaga 444 |||||||||||||||||||| |||||||||||| ||||||| || ||||||||||||||| Sbjct: 29247836 ggtcaagaaacagacttcattctggtctcatgctcaggttctgggattgaacctaacaga 29247777 Query: 445 agagaacaagttctcaaagcaaagaagg 472 ||||||||||| ||||||||||| |||| Sbjct: 29247776 agagaacaagtcctcaaagcaaaaaagg 29247749 Score = 101 bits (51), Expect = 3e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 205 gtacctttttcggctttccgccctgtaaaaccagaagatcctcccctagacccttttctt 264 ||||| ||||| ||||| || || ||||| || |||||||||||||||||||||||||| Sbjct: 29248416 gtaccattttcagcttttcggccagtaaaccctcaagatcctcccctagacccttttctt 29248357 Query: 265 gtgcataccttcacaattaggtttgaaccaaaaagacag 303 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 29248356 gtgcatacactaacaattaggtttgaacccaaaagacag 29248318 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 301 cagagacctggtgatggaacacaaggtgccactgaccccagaaattttgagctgatactg 360 |||||||||||||||||| | ||| |||| ||||||||||||||||||||||| ||| || Sbjct: 29248216 cagagacctggtgatggatctcaaagtgctactgaccccagaaattttgagcttatattg 29248157 Query: 361 gagtacatcaaagc 374 || ||||||||||| Sbjct: 29248156 gaatacatcaaagc 29248143 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 535 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcag 594 |||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| ||| Sbjct: 29247363 caggaagaacctggtggtcagcgtgcattgatctttgatcaagggaacagaatctcgcag 29247304 Query: 595 g 595 | Sbjct: 29247303 g 29247303 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 470 aggctggggaggatgcgctaagaaggtcaggccttggatacacaattgtacggcctggtc 529 ||||||| |||||||| | |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 29247664 aggctggagaggatgcattgagaaggtcaggccttggatacacaatagtacgccctggtc 29247605 Query: 530 cgctgcagg 538 | ||||||| Sbjct: 29247604 cactgcagg 29247596 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 597 tatcagctgtgcggatgtagcagatatctgtgtcaaagcattgcatgatt 646 |||||| || || |||||||||||||| |||||||||||||||||||||| Sbjct: 29247213 tatcagttgcgccgatgtagcagatatttgtgtcaaagcattgcatgatt 29247164 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 16 gagatatcaaagaggctctctctccctttaggttccaccctagacaggtatgat 69 ||||||||||| ||||| ||||| ||||| || || || ||||||||||||||| Sbjct: 29248824 gagatatcaaaaaggctatctcttcctttgggatctactctagacaggtatgat 29248771
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 212 bits (107), Expect = 1e-51 Identities = 134/143 (93%) Strand = Plus / Minus Query: 61 aggtatgatggcttgcttctttcagtgggtggaaatggaagatcatatgttgttattctt 120 |||||||||||||| ||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 11469 aggtatgatggcttacttttttcggtgggaggaaatggaagatcatatgttgttattctt 11410 Query: 121 gagactggtccactggctgacacctcgcagagtaagaagtattttgctcggatgactaca 180 ||||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 11409 gagactggtccgctggctgacacctcccagagcaagaagtactttgctcggatgactaca 11350 Query: 181 aaagtaggcttttgtagggtaag 203 |||||||| |||||||||||||| Sbjct: 11349 aaagtaggattttgtagggtaag 11327 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 385 ggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaacctaacaga 444 |||||||||||||||||||| |||||||||||| ||||||| || ||||||||||||||| Sbjct: 10634 ggtcaagaaacagacttcattctggtctcatgctcaggttctgggattgaacctaacaga 10575 Query: 445 agagaacaagttctcaaagcaaagaagg 472 ||||||||||| ||||||||||| |||| Sbjct: 10574 agagaacaagtcctcaaagcaaaaaagg 10547 Score = 101 bits (51), Expect = 3e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 205 gtacctttttcggctttccgccctgtaaaaccagaagatcctcccctagacccttttctt 264 ||||| ||||| ||||| || || ||||| || |||||||||||||||||||||||||| Sbjct: 11214 gtaccattttcagcttttcggccagtaaaccctcaagatcctcccctagacccttttctt 11155 Query: 265 gtgcataccttcacaattaggtttgaaccaaaaagacag 303 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 11154 gtgcatacactaacaattaggtttgaacccaaaagacag 11116 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 301 cagagacctggtgatggaacacaaggtgccactgaccccagaaattttgagctgatactg 360 |||||||||||||||||| | ||| |||| ||||||||||||||||||||||| ||| || Sbjct: 11014 cagagacctggtgatggatctcaaagtgctactgaccccagaaattttgagcttatattg 10955 Query: 361 gagtacatcaaagc 374 || ||||||||||| Sbjct: 10954 gaatacatcaaagc 10941 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 535 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcag 594 |||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| ||| Sbjct: 10161 caggaagaacctggtggtcagcgtgcattgatctttgatcaagggaacagaatctcgcag 10102 Query: 595 g 595 | Sbjct: 10101 g 10101 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 470 aggctggggaggatgcgctaagaaggtcaggccttggatacacaattgtacggcctggtc 529 ||||||| |||||||| | |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 10462 aggctggagaggatgcattgagaaggtcaggccttggatacacaatagtacgccctggtc 10403 Query: 530 cgctgcagg 538 | ||||||| Sbjct: 10402 cactgcagg 10394 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 597 tatcagctgtgcggatgtagcagatatctgtgtcaaagcattgcatgatt 646 |||||| || || |||||||||||||| |||||||||||||||||||||| Sbjct: 10011 tatcagttgcgccgatgtagcagatatttgtgtcaaagcattgcatgatt 9962 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 16 gagatatcaaagaggctctctctccctttaggttccaccctagacaggtatgat 69 ||||||||||| ||||| ||||| ||||| || || || ||||||||||||||| Sbjct: 11622 gagatatcaaaaaggctatctcttcctttgggatctactctagacaggtatgat 11569
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 147 bits (74), Expect = 5e-32 Identities = 119/134 (88%) Strand = Plus / Plus Query: 70 ggcttgcttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggt 129 ||||| ||||| || ||||||||||||||||||||||||||| | || |||||||||||| Sbjct: 2003672 ggcttacttctatccgtgggtggaaatggaagatcatatgttatcatccttgagactggt 2003731 Query: 130 ccactggctgacacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggc 189 ||||| ||||||||||| ||||| ||||| |||||||||||||||| || |||||||| Sbjct: 2003732 ccactagctgacacctcacagagcaagaaatattttgctcggatgaacactaaagtaggg 2003791 Query: 190 ttttgtagggtaag 203 ||||| |||||||| Sbjct: 2003792 ttttgcagggtaag 2003805 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 535 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcag 594 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 2004833 caggaagaacctggcggtcagcgtgctctgatctttgatcaagggaacagaatctctcag 2004892 Query: 595 g 595 | Sbjct: 2004893 g 2004893 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 385 ggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaacctaacaga 444 ||||||||||||||| | | |||| ||||||||||| || ||||| |||||||||||| Sbjct: 2004267 ggtcaagaaacagacattgttttggtttcatgcacaggctctggaatcgaacctaacaga 2004326 Query: 445 agagaacaagttctcaaagcaaagaagg 472 ||||||||||| |||||||||||||||| Sbjct: 2004327 agagaacaagtcctcaaagcaaagaagg 2004354 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 592 caggctatcagctgtgcggatgtagcagatatctgtgtcaaagcattgcatgatt 646 |||| |||||||||||| || |||||||||||||||||||| |||||||| |||| Sbjct: 2004993 cagggtatcagctgtgccgacgtagcagatatctgtgtcaaggcattgcacgatt 2005047 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 244 cctcccctagacccttttcttgtgcataccttcacaattaggtttgaaccaaaaagacag 303 ||||| || ||||||||||||||||| || || || || ||||||||||| |||| |||| Sbjct: 2003950 cctcctcttgacccttttcttgtgcacacattaaccataaggtttgaacccaaaaaacag 2004009 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 44 taggttccaccctagacaggtatgat 69 ||||||||||||||||||||| |||| Sbjct: 2003542 taggttccaccctagacaggtgtgat 2003567 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 tctctcaggctatcagctgt 606 |||||||||||||||||||| Sbjct: 31669167 tctctcaggctatcagctgt 31669186
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 147 bits (74), Expect = 5e-32 Identities = 119/134 (88%) Strand = Plus / Plus Query: 70 ggcttgcttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggt 129 ||||| ||||| || ||||||||||||||||||||||||||| | || |||||||||||| Sbjct: 53880 ggcttacttctatccgtgggtggaaatggaagatcatatgttatcatccttgagactggt 53939 Query: 130 ccactggctgacacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggc 189 ||||| ||||||||||| ||||| ||||| |||||||||||||||| || |||||||| Sbjct: 53940 ccactagctgacacctcacagagcaagaaatattttgctcggatgaacactaaagtaggg 53999 Query: 190 ttttgtagggtaag 203 ||||| |||||||| Sbjct: 54000 ttttgcagggtaag 54013 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 535 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcag 594 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 55041 caggaagaacctggcggtcagcgtgctctgatctttgatcaagggaacagaatctctcag 55100 Query: 595 g 595 | Sbjct: 55101 g 55101 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 385 ggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaacctaacaga 444 ||||||||||||||| | | |||| ||||||||||| || ||||| |||||||||||| Sbjct: 54475 ggtcaagaaacagacattgttttggtttcatgcacaggctctggaatcgaacctaacaga 54534 Query: 445 agagaacaagttctcaaagcaaagaagg 472 ||||||||||| |||||||||||||||| Sbjct: 54535 agagaacaagtcctcaaagcaaagaagg 54562 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 592 caggctatcagctgtgcggatgtagcagatatctgtgtcaaagcattgcatgatt 646 |||| |||||||||||| || |||||||||||||||||||| |||||||| |||| Sbjct: 55201 cagggtatcagctgtgccgacgtagcagatatctgtgtcaaggcattgcacgatt 55255 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 244 cctcccctagacccttttcttgtgcataccttcacaattaggtttgaaccaaaaagacag 303 ||||| || ||||||||||||||||| || || || || ||||||||||| |||| |||| Sbjct: 54158 cctcctcttgacccttttcttgtgcacacattaaccataaggtttgaacccaaaaaacag 54217 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 44 taggttccaccctagacaggtatgat 69 ||||||||||||||||||||| |||| Sbjct: 53750 taggttccaccctagacaggtgtgat 53775
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 147 bits (74), Expect = 5e-32 Identities = 119/134 (88%) Strand = Plus / Plus Query: 70 ggcttgcttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggt 129 ||||| ||||| || ||||||||||||||||||||||||||| | || |||||||||||| Sbjct: 143233 ggcttacttctatccgtgggtggaaatggaagatcatatgttatcatccttgagactggt 143292 Query: 130 ccactggctgacacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggc 189 ||||| ||||||||||| ||||| ||||| |||||||||||||||| || |||||||| Sbjct: 143293 ccactagctgacacctcacagagcaagaaatattttgctcggatgaacactaaagtaggg 143352 Query: 190 ttttgtagggtaag 203 ||||| |||||||| Sbjct: 143353 ttttgcagggtaag 143366 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 535 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcag 594 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 144394 caggaagaacctggcggtcagcgtgctctgatctttgatcaagggaacagaatctctcag 144453 Query: 595 g 595 | Sbjct: 144454 g 144454 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 385 ggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaacctaacaga 444 ||||||||||||||| | | |||| ||||||||||| || ||||| |||||||||||| Sbjct: 143828 ggtcaagaaacagacattgttttggtttcatgcacaggctctggaatcgaacctaacaga 143887 Query: 445 agagaacaagttctcaaagcaaagaagg 472 ||||||||||| |||||||||||||||| Sbjct: 143888 agagaacaagtcctcaaagcaaagaagg 143915 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 592 caggctatcagctgtgcggatgtagcagatatctgtgtcaaagcattgcatgatt 646 |||| |||||||||||| || |||||||||||||||||||| |||||||| |||| Sbjct: 144554 cagggtatcagctgtgccgacgtagcagatatctgtgtcaaggcattgcacgatt 144608 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 244 cctcccctagacccttttcttgtgcataccttcacaattaggtttgaaccaaaaagacag 303 ||||| || ||||||||||||||||| || || || || ||||||||||| |||| |||| Sbjct: 143511 cctcctcttgacccttttcttgtgcacacattaaccataaggtttgaacccaaaaaacag 143570 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 44 taggttccaccctagacaggtatgat 69 ||||||||||||||||||||| |||| Sbjct: 143103 taggttccaccctagacaggtgtgat 143128
>ref|NM_101533.3| Arabidopsis thaliana oxidoreductase AT1G16720 mRNA, complete cds Length = 2100 Score = 123 bits (62), Expect = 8e-25 Identities = 230/286 (80%) Strand = Plus / Plus Query: 361 gagtacatcaaagcattacctaccggtcaagaaacagacttcatactggtctcatgcaca 420 |||||||| ||||| || ||| | ||||||||||||||||| || ||||| || || || Sbjct: 1439 gagtacataaaagctttgcctgcgggtcaagaaacagactttattctggtatcgtgtact 1498 Query: 421 ggttccggaattgaacctaacagaagagaacaagttctcaaagcaaagaaggctggggag 480 ||||| ||| | ||| | |||||||| || ||||| | ||||| |||| |||||| || Sbjct: 1499 ggttcgggagtagaagccaacagaagggagcaagtgttgaaagctaagagggctggtgaa 1558 Query: 481 gatgcgctaagaaggtcaggccttggatacacaattgtacggcctggtccgctgcaggaa 540 ||| | |||| || |||||||||||||||||||| | || |||||||| || |||| Sbjct: 1559 gattctttaaggagatcaggccttggatacacaatcattcgtcctggtcccttgaaggag 1618 Query: 541 gaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcaggctatc 600 ||||| ||||| || || || ||||| |||||||||||||||||||| ||||||| || Sbjct: 1619 gaaccaggcgggcaacgagctctgatatttgatcaaggaaacagaatttctcagggcatt 1678 Query: 601 agctgtgcggatgtagcagatatctgtgtcaaagcattgcatgatt 646 || || |||||||| || ||||| |||||||| ||| |||| |||| Sbjct: 1679 agttgcgcggatgtggctgatatatgtgtcaaggcactgcacgatt 1724 Score = 73.8 bits (37), Expect = 6e-10 Identities = 205/261 (78%) Strand = Plus / Plus Query: 58 gacaggtatgatggcttgcttctttcagtgggtggaaatggaagatcatatgttgttatt 117 |||||||| || ||||| ||||||| || ||||| ||||||||||| |||||||| || Sbjct: 1133 gacaggtacgaaggcttagttctttctgttggtgggaatggaagatcctatgttgtaatc 1192 Query: 118 cttgagactggtccactggctgacacctcgcagagtaagaagtattttgctcggatgact 177 ||||| |||||||| | || | || ||||| || ||||||| ||| |||| | | Sbjct: 1193 cttgaagctggtccatcatcagatatgtctcagagcaaacagtatttcgctaggatcagt 1252 Query: 178 acaaaagtaggcttttgtagggtaagagtacctttttcggctttccgccctgtaaaacca 237 || |||| ||| |||||| ||||||| || || ||||| ||||| || || || || ||| Sbjct: 1253 accaaagcagggttttgtcgggtaagggtgccattttcagcttttcgaccggtcaaccca 1312 Query: 238 gaagatcctcccctagacccttttcttgtgcataccttcacaattaggtttgaaccaaaa 297 |||||||| || ||||| || |||||||| || || || ||||| | ||||| || ||| Sbjct: 1313 gaagatccaccgctagatccatttcttgttcacacattgacaatacgctttgagcctaaa 1372 Query: 298 agacagagacctggtgatgga 318 |||||||| |||| ||||||| Sbjct: 1373 agacagaggcctgttgatgga 1393
>gb|AY128723.1| Arabidopsis thaliana unknown protein (At1g16720) mRNA, complete cds Length = 1863 Score = 123 bits (62), Expect = 8e-25 Identities = 230/286 (80%) Strand = Plus / Plus Query: 361 gagtacatcaaagcattacctaccggtcaagaaacagacttcatactggtctcatgcaca 420 |||||||| ||||| || ||| | ||||||||||||||||| || ||||| || || || Sbjct: 1366 gagtacataaaagctttgcctgcgggtcaagaaacagactttattctggtatcgtgtact 1425 Query: 421 ggttccggaattgaacctaacagaagagaacaagttctcaaagcaaagaaggctggggag 480 ||||| ||| | ||| | |||||||| || ||||| | ||||| |||| |||||| || Sbjct: 1426 ggttcgggagtagaagccaacagaagggagcaagtgttgaaagctaagagggctggtgaa 1485 Query: 481 gatgcgctaagaaggtcaggccttggatacacaattgtacggcctggtccgctgcaggaa 540 ||| | |||| || |||||||||||||||||||| | || |||||||| || |||| Sbjct: 1486 gattctttaaggagatcaggccttggatacacaatcattcgtcctggtcccttgaaggag 1545 Query: 541 gaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcaggctatc 600 ||||| ||||| || || || ||||| |||||||||||||||||||| ||||||| || Sbjct: 1546 gaaccaggcgggcaacgagctctgatatttgatcaaggaaacagaatttctcagggcatt 1605 Query: 601 agctgtgcggatgtagcagatatctgtgtcaaagcattgcatgatt 646 || || |||||||| || ||||| |||||||| ||| |||| |||| Sbjct: 1606 agttgcgcggatgtggctgatatatgtgtcaaggcactgcacgatt 1651 Score = 73.8 bits (37), Expect = 6e-10 Identities = 205/261 (78%) Strand = Plus / Plus Query: 58 gacaggtatgatggcttgcttctttcagtgggtggaaatggaagatcatatgttgttatt 117 |||||||| || ||||| ||||||| || ||||| ||||||||||| |||||||| || Sbjct: 1060 gacaggtacgaaggcttagttctttctgttggtgggaatggaagatcctatgttgtaatc 1119 Query: 118 cttgagactggtccactggctgacacctcgcagagtaagaagtattttgctcggatgact 177 ||||| |||||||| | || | || ||||| || ||||||| ||| |||| | | Sbjct: 1120 cttgaagctggtccatcatcagatatgtctcagagcaaacagtatttcgctaggatcagt 1179 Query: 178 acaaaagtaggcttttgtagggtaagagtacctttttcggctttccgccctgtaaaacca 237 || |||| ||| |||||| ||||||| || || ||||| ||||| || || || || ||| Sbjct: 1180 accaaagcagggttttgtcgggtaagggtgccattttcagcttttcgaccggtcaaccca 1239 Query: 238 gaagatcctcccctagacccttttcttgtgcataccttcacaattaggtttgaaccaaaa 297 |||||||| || ||||| || |||||||| || || || ||||| | ||||| || ||| Sbjct: 1240 gaagatccaccgctagatccatttcttgttcacacattgacaatacgctttgagcctaaa 1299 Query: 298 agacagagacctggtgatgga 318 |||||||| |||| ||||||| Sbjct: 1300 agacagaggcctgttgatgga 1320
>gb|AY062632.1| Arabidopsis thaliana Unknown protein (At1g16720; F17F16.7) mRNA, complete cds Length = 2040 Score = 123 bits (62), Expect = 8e-25 Identities = 230/286 (80%) Strand = Plus / Plus Query: 361 gagtacatcaaagcattacctaccggtcaagaaacagacttcatactggtctcatgcaca 420 |||||||| ||||| || ||| | ||||||||||||||||| || ||||| || || || Sbjct: 1439 gagtacataaaagctttgcctgcgggtcaagaaacagactttattctggtatcgtgtact 1498 Query: 421 ggttccggaattgaacctaacagaagagaacaagttctcaaagcaaagaaggctggggag 480 ||||| ||| | ||| | |||||||| || ||||| | ||||| |||| |||||| || Sbjct: 1499 ggttcgggagtagaagccaacagaagggagcaagtgttgaaagctaagagggctggtgaa 1558 Query: 481 gatgcgctaagaaggtcaggccttggatacacaattgtacggcctggtccgctgcaggaa 540 ||| | |||| || |||||||||||||||||||| | || |||||||| || |||| Sbjct: 1559 gattctttaaggagatcaggccttggatacacaatcattcgtcctggtcccttgaaggag 1618 Query: 541 gaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcaggctatc 600 ||||| ||||| || || || ||||| |||||||||||||||||||| ||||||| || Sbjct: 1619 gaaccaggcgggcaacgagctctgatatttgatcaaggaaacagaatttctcagggcatt 1678 Query: 601 agctgtgcggatgtagcagatatctgtgtcaaagcattgcatgatt 646 || || |||||||| || ||||| |||||||| ||| |||| |||| Sbjct: 1679 agttgcgcggatgtggctgatatatgtgtcaaggcactgcacgatt 1724 Score = 73.8 bits (37), Expect = 6e-10 Identities = 205/261 (78%) Strand = Plus / Plus Query: 58 gacaggtatgatggcttgcttctttcagtgggtggaaatggaagatcatatgttgttatt 117 |||||||| || ||||| ||||||| || ||||| ||||||||||| |||||||| || Sbjct: 1133 gacaggtacgaaggcttagttctttctgttggtgggaatggaagatcctatgttgtaatc 1192 Query: 118 cttgagactggtccactggctgacacctcgcagagtaagaagtattttgctcggatgact 177 ||||| |||||||| | || | || ||||| || ||||||| ||| |||| | | Sbjct: 1193 cttgaagctggtccatcatcagatatgtctcagagcaaacagtatttcgctaggatcagt 1252 Query: 178 acaaaagtaggcttttgtagggtaagagtacctttttcggctttccgccctgtaaaacca 237 || |||| ||| |||||| ||||||| || || ||||| ||||| || || || || ||| Sbjct: 1253 accaaagcagggttttgtcgggtaagggtgccattttcagcttttcgaccggtcaaccca 1312 Query: 238 gaagatcctcccctagacccttttcttgtgcataccttcacaattaggtttgaaccaaaa 297 |||||||| || ||||| || |||||||| || || || ||||| | ||||| || ||| Sbjct: 1313 gaagatccaccgctagatccatttcttgttcacacattgacaatacgctttgagcctaaa 1372 Query: 298 agacagagacctggtgatgga 318 |||||||| |||| ||||||| Sbjct: 1373 agacagaggcctgttgatgga 1393
>gb|AC144538.23| Medicago truncatula clone mth2-31l21, complete sequence Length = 135050 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 535 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctc 592 |||||||||||||| || |||||||| || || |||||||||||| ||||||| |||| Sbjct: 45235 caggaagaacctggtgggcagcgtgctctaatatttgatcaaggagacagaatatctc 45292 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 251 tagacccttttcttgtgcataccttcacaattaggtttgaaccaaaaagacag 303 |||||||||||||||| ||||| || ||||| ||||||| || | ||||||| Sbjct: 42878 tagacccttttcttgtacatacattaacaatacggtttgagcctagaagacag 42930 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 177 tacaaaagtaggcttttgtagggtaaga 204 ||||||||| || ||||||||||||||| Sbjct: 42662 tacaaaagtgggattttgtagggtaaga 42689
>gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19K19 genomic sequence, complete sequence Length = 93485 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 536 aggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcagg 595 |||| ||||| ||||| || || || ||||| |||||||||||||||||||| ||||||| Sbjct: 12992 aggaggaaccaggcgggcaacgagctctgatatttgatcaaggaaacagaatttctcagg 12933 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 77 ttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtcca 132 ||||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| Sbjct: 13968 ttctttctgttggtgggaatggaagatcctatgttgtaatccttgaagctggtcca 13913 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 tcaggccttggatacacaat 515 |||||||||||||||||||| Sbjct: 13098 tcaggccttggatacacaat 13079
>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete sequence Length = 90498 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 536 aggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcagg 595 |||| ||||| ||||| || || || ||||| |||||||||||||||||||| ||||||| Sbjct: 75269 aggaggaaccaggcgggcaacgagctctgatatttgatcaaggaaacagaatttctcagg 75210 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 77 ttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtcca 132 ||||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| Sbjct: 76245 ttctttctgttggtgggaatggaagatcctatgttgtaatccttgaagctggtcca 76190 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 tcaggccttggatacacaat 515 |||||||||||||||||||| Sbjct: 75375 tcaggccttggatacacaat 75356
>dbj|AP007265.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT11L01, TM1658, complete sequence Length = 99089 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 535 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcag 594 |||||||||||||| || ||||| || || || |||||||||||||| |||| |||||| Sbjct: 26564 caggaagaacctggtgggcagcgcgctctaatatttgatcaaggaaatcgaatatctcag 26505 Query: 595 g 595 | Sbjct: 26504 g 26504 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 177 tacaaaagtaggcttttgtagggtaagagta 207 ||||||||| || |||||||||||||||||| Sbjct: 29772 tacaaaagtgggattttgtagggtaagagta 29742
>gb|AF233439.7| Homo sapiens chromosome 8 clones GS1-24F4, CTD-2629I16 map p23.1, complete sequences Length = 231283 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 gatcatatgttgttattcttgagac 125 |||||||||| |||||||||||||| Sbjct: 63666 gatcatatgtggttattcttgagac 63690
>gb|AF205406.5| Homo sapiens chromosome 8 clone SCb-633e22 map p23.1, complete sequence Length = 168907 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 gatcatatgttgttattcttgagac 125 |||||||||| |||||||||||||| Sbjct: 16373 gatcatatgtggttattcttgagac 16397
>gb|AF298854.5| Homo sapiens chromosome 8 clone SCb-207i3 map p23.1, complete sequence Length = 110283 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 gatcatatgttgttattcttgagac 125 |||||||||| |||||||||||||| Sbjct: 26394 gatcatatgtggttattcttgagac 26418
>gb|AY342055.1| Siphonodentalium lobatum mitochondrion, complete genome Length = 13932 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 ggtccgctgcaggaagaacct 546 ||||||||||||||||||||| Sbjct: 7677 ggtccgctgcaggaagaacct 7657
>emb|CR382335.12| Zebrafish DNA sequence from clone DKEY-56I16 in linkage group 14, complete sequence Length = 159057 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 atcaaagaggctctctctccc 41 ||||||||||||||||||||| Sbjct: 19864 atcaaagaggctctctctccc 19884
>gb|AC118470.2| Homo sapiens chromosome 1 clone RP11-634B7, complete sequence Length = 59105 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ttcagtgggtggaaatggaag 101 ||||||||||||||||||||| Sbjct: 9478 ttcagtgggtggaaatggaag 9458
>gb|AC021785.10| Homo sapiens chromosome , clone RP11-21C17, complete sequence Length = 156232 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 aggtatgatggcttgcttctt 81 ||||||||||||||||||||| Sbjct: 82005 aggtatgatggcttgcttctt 81985
>gb|AC008919.9| Homo sapiens chromosome 5 clone CTD-2276O24, complete sequence Length = 106689 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 agcaaagaaggctggggagga 482 ||||||||||||||||||||| Sbjct: 56863 agcaaagaaggctggggagga 56843
>gb|AC022441.5| Homo sapiens chromosome 5 clone RP11-317O24, complete sequence Length = 193057 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 462 agcaaagaaggctggggagga 482 ||||||||||||||||||||| Sbjct: 175202 agcaaagaaggctggggagga 175222
>gb|AC133940.4| Mus musculus BAC clone RP23-433D1 from 16, complete sequence Length = 172079 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 attgaacctaacagaagagaa 450 ||||||||||||||||||||| Sbjct: 122993 attgaacctaacagaagagaa 123013
>emb|AL606921.6| Mouse DNA sequence from clone RP23-209C6 on chromosome 4, complete sequence Length = 173639 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 agacagagacctggtgatgga 318 ||||||||||||||||||||| Sbjct: 114597 agacagagacctggtgatgga 114617
>emb|AL831770.3| Human DNA sequence from clone RP13-297M11 on chromosome 1, complete sequence Length = 151857 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 462 agcaaagaaggctggggagga 482 ||||||||||||||||||||| Sbjct: 47494 agcaaagaaggctggggagga 47514
>gb|AC121842.3| Mus musculus BAC clone RP24-80L24 from chromosome 3, complete sequence Length = 173273 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 aaatggaagatcatatgttg 112 |||||||||||||||||||| Sbjct: 73076 aaatggaagatcatatgttg 73057
>gb|BC025830.1| Mus musculus RIKEN cDNA 4732466D17 gene, mRNA (cDNA clone IMAGE:5124369), partial cds Length = 3071 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 gctctctctccctttaggtt 49 |||||||||||||||||||| Sbjct: 1093 gctctctctccctttaggtt 1074
>gb|BC049922.1| Mus musculus RIKEN cDNA 4732466D17 gene, mRNA (cDNA clone IMAGE:5053952), partial cds Length = 2617 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 gctctctctccctttaggtt 49 |||||||||||||||||||| Sbjct: 640 gctctctctccctttaggtt 621
>ref|XM_782771.1| PREDICTED: Strongylocentrotus purpuratus similar to tau tubulin kinase 1 (LOC582833), mRNA Length = 6465 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cgagggagatatcaaagagg 30 |||||||||||||||||||| Sbjct: 5589 cgagggagatatcaaagagg 5608
>emb|AL627132.4| Zebrafish DNA sequence from clone RP71-1H3 in linkage group 13 Contains part of a putative novel gene, a novel LINE element similar to X. laevis TX1 and two CpG islands, complete sequence Length = 146039 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 agcaaagaaggctggggagg 481 |||||||||||||||||||| Sbjct: 122095 agcaaagaaggctggggagg 122076
>gb|AC161805.4| Mus musculus chromosome 1, clone RP24-325N3, complete sequence Length = 192649 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 gctctctctccctttaggtt 49 |||||||||||||||||||| Sbjct: 116502 gctctctctccctttaggtt 116521
>dbj|AK128969.1| Mus musculus cDNA fis, clone TRACH3014415, weakly similar to Carboxypeptidase S precursor (EC 3.4.17.4) Length = 3571 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 gctctctctccctttaggtt 49 |||||||||||||||||||| Sbjct: 1609 gctctctctccctttaggtt 1590
>dbj|AK143953.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F530005P20 product:Hypothetical peptidase family M20/M25/M40 containing protein, full insert sequence Length = 3361 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 gctctctctccctttaggtt 49 |||||||||||||||||||| Sbjct: 1598 gctctctctccctttaggtt 1579
>gb|AC115001.11| Mus musculus chromosome 1, clone RP24-128M9, complete sequence Length = 138851 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 gctctctctccctttaggtt 49 |||||||||||||||||||| Sbjct: 130001 gctctctctccctttaggtt 130020
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 tctctcaggctatcagctgt 606 |||||||||||||||||||| Sbjct: 48954 tctctcaggctatcagctgt 48973
>gb|AC154370.1| Mus musculus BAC clone RP24-576A8 from 17, complete sequence Length = 167763 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tgcttctttcagtgggtgga 93 |||||||||||||||||||| Sbjct: 62906 tgcttctttcagtgggtgga 62925
>emb|CT009580.9| Mouse DNA sequence from clone RP23-133F14 on chromosome 17, complete sequence Length = 191260 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tgcttctttcagtgggtgga 93 |||||||||||||||||||| Sbjct: 62133 tgcttctttcagtgggtgga 62114
>gb|AC154178.1| Mus musculus BAC clone RP23-465N18 from 17, complete sequence Length = 191399 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 620 atatctgtgtcaaagcattgcatg 643 |||| ||||||||||||||||||| Sbjct: 72803 atatatgtgtcaaagcattgcatg 72826 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,968,077 Number of Sequences: 3902068 Number of extensions: 5968077 Number of successful extensions: 111695 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 42 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 111473 Number of HSP's gapped (non-prelim): 216 length of query: 646 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 623 effective length of database: 17,143,297,704 effective search space: 10680274469592 effective search space used: 10680274469592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
