>TSN31_BRARE (Q7ZUB3) Tetraspanin-31 (Tspan-31) (Sarcoma amplified sequence|
           homolog)
          Length = 212

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +2

Query: 65  SDVPKC---CTRSKQCTICGTKCKQHSRSPL 148
           SD+  C   CT+ K+C  CG K  QHS   L
Sbjct: 144 SDLHLCTSPCTQKKECVTCGLKMLQHSSEAL 174

>NOP14_HUMAN (P78316) Probable nucleolar complex protein 14|
          Length = 857

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
 Frame = -2

Query: 186 LKPCVAHSLDHRKRGLLLCCLHL---------VPHMVHCLLLVQHLGTSDFASVSHKMTH 34
           L  C   SL    +GL +CCL L         +P +++ LL + ++ T + AS    + H
Sbjct: 577 LTKCPILSLQDVVKGLFVCCLFLEYVALSQRFIPELINFLLGILYIATPNKASQGSTLVH 636

>GIT3_SCHPO (O94744) Glucose receptor protein git3 (Glucose insensitive|
           transcription protein 3)
          Length = 466

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +3

Query: 15  RSYPKPYVSFYGSHLQNQMYPNVAPGASSVPYVEPSASNTAEAPFSDGPN 164
           +S P PY       L + ++PN+ PG+ S P     +    E  F D PN
Sbjct: 272 QSQPSPY----SRPLLSSVHPNLPPGSQSTPANLNQSGIHFEQDFRDSPN 317

>BUR1_CANGA (Q6FQ83) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC|
           2.7.11.23)
          Length = 667

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
 Frame = +3

Query: 45  YGSHLQNQMYP------NVAPGASSVPYVEPSASNTAEAPFSDGPNYGQHK 179
           Y S+ +N  YP      N  P   SVP+ +P A+    +    GP YG+++
Sbjct: 445 YQSNQKNDQYPIKRQKFNQNP---SVPHPQPKANRYGGSSLPSGPKYGRYE 492

>GUNC_PSEFL (P27033) Endoglucanase C precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase) (EGC)
           (Cellodextrinase C)
          Length = 748

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 16/66 (24%), Positives = 32/66 (48%)
 Frame = +3

Query: 24  PKPYVSFYGSHLQNQMYPNVAPGASSVPYVEPSASNTAEAPFSDGPNYGQHKVSTATNYA 203
           P PY    GS   + +  +    +SS   V PS+S+++  P S   +     V ++++ +
Sbjct: 219 PAPYGIVGGSSSPSSISSSSVRSSSSSSVVPPSSSSSSSVPSSSCSSVSSSSVVSSSSSS 278

Query: 204 LHVPSS 221
           + VP +
Sbjct: 279 VSVPGT 284

>PACC_NEUCR (Q7RVQ8) pH-response transcription factor pacC/RIM101|
          Length = 621

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +3

Query: 66  QMYPNVAPGASSVPYVEPSASNTAEAPFSDGPNYGQHKVSTATNYALHVPSST 224
           Q  P  AP  ++ P   P+AS    A  +  P    +  ++A+N     PS+T
Sbjct: 25  QTTPTPAPATAATPTTAPAASANGTAANAMKPEASSNSSNSASNGTTPAPSTT 77

>AMDR_EMENI (P15699) Acetamidase regulatory protein|
          Length = 765

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 63  NQMYPNVAPGASSVPYVEPSASNTAE 140
           N  Y NV P   S PY  P+AS+ +E
Sbjct: 142 NTQYQNVLPEPDSPPYSRPAASDPSE 167

>SMAD1_COTJA (Q9I962) Mothers against decapentaplegic homolog 1 (SMAD 1)|
           (Mothers against DPP homolog 1) (Mad-related protein 1)
          Length = 465

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +3

Query: 54  HLQNQMYPNVAPGASSVPYVEPSASNTAEAPF 149
           H  N  YPN +PG+SS  Y    AS+   +PF
Sbjct: 186 HSPNSSYPN-SPGSSSSTYPHSPASSDPGSPF 216

>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4|
            (Trithorax homolog 2)
          Length = 2715

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +2

Query: 74   PKCCTRSKQCTICGT--KCKQHSRSPLFRWSKLWATQGFNRHQLCSPCTLLHLEGS 235
            P   TR ++  IC    +CK    +P   W   W+      + LC  CT L+ +G+
Sbjct: 1285 PTRATRKRRHWICSACVRCKSCGATPGKNWDVEWSGD----YSLCPRCTQLYEKGN 1336

>HERC2_MOUSE (Q4U2R1) HECT domain and RCC1-like domain-containing protein 2|
          Length = 4836

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 141  LLLCCLHLVPHMVHCLLLVQHLGTSDFASVSHK 43
            LLLCCL     + H  L + H+GT     V H+
Sbjct: 1440 LLLCCLLKHEDLGHVALSLVHVGTLGIEQVKHR 1472

>XERD_CHLPN (Q9Z6N5) Tyrosine recombinase xerD|
          Length = 301

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = -2

Query: 222 WRRVHGEHSWWRLKPCVAHSLDHRKRGLLLCCLHLVPHMVHCLLLVQHLGTSDFASVSHK 43
           WRR+H        KP   HSL H          HL+ +     ++ + LG +  AS +  
Sbjct: 228 WRRIHNYAKQVTSKPVSPHSLRH------AFATHLLDNKADLRVIQEMLGHARIAS-TEV 280

Query: 42  MTHMV*DKISE 10
            TH+  D + E
Sbjct: 281 YTHVAADSLIE 291


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,060,698
Number of Sequences: 219361
Number of extensions: 834982
Number of successful extensions: 2987
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2984
length of database: 80,573,946
effective HSP length: 53
effective length of database: 68,947,813
effective search space used: 1654747512
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)