ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalp14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X98124.1|HVJIP H.vulgare gene encoding jasmonate-induced pro... 462 e-127
2gb|AC068051.7| Homo sapiens BAC clone RP11-172J1 from 2, complet... 44 0.48
3gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome 44 0.48
4emb|CR733803.2|CNS0GSZE Tetraodon nigroviridis full-length cDNA 42 1.9
5emb|CR711764.2|CNS0GC5C Tetraodon nigroviridis full-length cDNA 42 1.9
6emb|CR716404.2|CNS0GFQ5 Tetraodon nigroviridis full-length cDNA 42 1.9
7emb|CR708959.2|CNS0G9ZF Tetraodon nigroviridis full-length cDNA 42 1.9
8emb|CR699377.2|CNS0G2L9 Tetraodon nigroviridis full-length cDNA 42 1.9
9emb|CR698020.2|CNS0G1JK Tetraodon nigroviridis full-length cDNA 42 1.9
10emb|CR696410.2|CNS0G0AU Tetraodon nigroviridis full-length cDNA 42 1.9
11emb|CR696296.2|CNS0G07O Tetraodon nigroviridis full-length cDNA 42 1.9
12emb|CR695497.2|CNS0FZLH Tetraodon nigroviridis full-length cDNA 42 1.9
13emb|CR692536.2|CNS0FXB8 Tetraodon nigroviridis full-length cDNA 42 1.9
14emb|CR689433.2|CNS0FUX1 Tetraodon nigroviridis full-length cDNA 42 1.9
15emb|CR680402.2|CNS0FNY6 Tetraodon nigroviridis full-length cDNA 42 1.9
16emb|CR677964.2|CNS0FM2S Tetraodon nigroviridis full-length cDNA 42 1.9
17emb|CR677142.2|CNS0FLG2 Tetraodon nigroviridis full-length cDNA 42 1.9
18emb|CR676082.2|CNS0FKMW Tetraodon nigroviridis full-length cDNA 42 1.9
19emb|CR675727.2|CNS0FKD1 Tetraodon nigroviridis full-length cDNA 42 1.9
20emb|CR675512.2|CNS0FK72 Tetraodon nigroviridis full-length cDNA 42 1.9
21emb|CR674041.2|CNS0FJ27 Tetraodon nigroviridis full-length cDNA 42 1.9
22emb|CR673710.2|CNS0FIT0 Tetraodon nigroviridis full-length cDNA 42 1.9
23emb|CR671918.2|CNS0FHF8 Tetraodon nigroviridis full-length cDNA 42 1.9
24emb|CR671342.2|CNS0FGZ8 Tetraodon nigroviridis full-length cDNA 42 1.9
25emb|CR670529.2|CNS0FGCN Tetraodon nigroviridis full-length cDNA 42 1.9
26emb|CR669878.2|CNS0FFUK Tetraodon nigroviridis full-length cDNA 42 1.9
27emb|CR669596.2|CNS0FFMQ Tetraodon nigroviridis full-length cDNA 42 1.9
28emb|CR668449.2|CNS0FEQV Tetraodon nigroviridis full-length cDNA 42 1.9
29emb|CR667750.2|CNS0FE7G Tetraodon nigroviridis full-length cDNA 42 1.9
30emb|CR667585.2|CNS0FE2V Tetraodon nigroviridis full-length cDNA 42 1.9
31emb|CR665342.2|CNS0FCCK Tetraodon nigroviridis full-length cDNA 42 1.9
32emb|CR664863.2|CNS0FBZ9 Tetraodon nigroviridis full-length cDNA 42 1.9
33emb|CR664097.2|CNS0FBDZ Tetraodon nigroviridis full-length cDNA 42 1.9
34emb|CR661788.2|CNS0F9LU Tetraodon nigroviridis full-length cDNA 42 1.9
35emb|CR660976.2|CNS0F8ZA Tetraodon nigroviridis full-length cDNA 42 1.9
36emb|CR660605.2|CNS0F8OZ Tetraodon nigroviridis full-length cDNA 42 1.9
37emb|CR659570.2|CNS0F7W8 Tetraodon nigroviridis full-length cDNA 42 1.9
38emb|CR659084.2|CNS0F7IQ Tetraodon nigroviridis full-length cDNA 42 1.9
39emb|CR651699.2|CNS0F1TL Tetraodon nigroviridis full-length cDNA 42 1.9
40emb|CR651536.2|CNS0F1P2 Tetraodon nigroviridis full-length cDNA 42 1.9
41emb|CR651336.2|CNS0F1JI Tetraodon nigroviridis full-length cDNA 42 1.9
42emb|CR650557.2|CNS0F0XV Tetraodon nigroviridis full-length cDNA 42 1.9
43emb|CR649305.2|CNS0EZZ3 Tetraodon nigroviridis full-length cDNA 42 1.9
44emb|CR648318.2|CNS0EZ7O Tetraodon nigroviridis full-length cDNA 42 1.9
45emb|CR646958.2|CNS0EY5W Tetraodon nigroviridis full-length cDNA 42 1.9
46emb|CR645869.2|CNS0EXBN Tetraodon nigroviridis full-length cDNA 42 1.9
47emb|CR644577.2|CNS0EWBR Tetraodon nigroviridis full-length cDNA 42 1.9
48emb|CR643036.2|CNS0EV4Y Tetraodon nigroviridis full-length cDNA 42 1.9
49emb|CR641795.2|CNS0EU6H Tetraodon nigroviridis full-length cDNA 42 1.9
50emb|CR638894.2|CNS0ERXW Tetraodon nigroviridis full-length cDNA 42 1.9
51emb|CR638268.2|CNS0ERGI Tetraodon nigroviridis full-length cDNA 42 1.9
52emb|CR637928.2|CNS0ER72 Tetraodon nigroviridis full-length cDNA 42 1.9
53emb|CR636839.2|CNS0EQCT Tetraodon nigroviridis full-length cDNA 42 1.9
54emb|CR635741.2|CNS0EPIB Tetraodon nigroviridis full-length cDNA 42 1.9
55emb|CR634961.2|CNS0EOWN Tetraodon nigroviridis full-length cDNA 42 1.9
56emb|CR634400.2|CNS0EOH2 Tetraodon nigroviridis full-length cDNA 42 1.9
57emb|CR634390.2|CNS0EOGS Tetraodon nigroviridis full-length cDNA 42 1.9
58gb|AC096917.3| Homo sapiens chromosome 3 clone RP11-94D19, compl... 42 1.9
59gb|AF152363.1|AF152363 Homo sapiens constitutive fragile region ... 42 1.9
60ref|NM_178397.2| Mus musculus UBX domain containing 8 (Ubxd8), mRNA 40 7.5
61gb|AC006027.5| Homo sapiens BAC clone GS1-114I9 from 7, complete... 40 7.5
62gb|AY187250.1| Homo sapiens CARD4 isoform 2 (CARD4) mRNA, partia... 40 7.5
63gb|AY187249.1| Homo sapiens CARD4 isoform 1 (CARD4) mRNA, partia... 40 7.5
64emb|Z73912.1|CEZK524 Caenorhabditis elegans Cosmid ZK524, comple... 40 7.5
65gb|BC040339.1| Homo sapiens caspase recruitment domain family, m... 40 7.5
66emb|BX640421.1| Bordetella pertussis strain Tohama I, complete g... 40 7.5
67ref|NM_006092.1| Homo sapiens caspase recruitment domain family,... 40 7.5
68dbj|AK023969.1| Homo sapiens cDNA FLJ13907 fis, clone Y79AA10000... 40 7.5
69dbj|AK151617.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 7.5
70dbj|AK148529.1| Mus musculus adult pancreas islet cells cDNA, RI... 40 7.5
71dbj|AK170111.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 7.5
72ref|NM_001026704.2| Caenorhabditis elegans Leucyl tRNA Synthetas... 40 7.5
73ref|NM_001026705.2| Caenorhabditis elegans Leucyl tRNA Synthetas... 40 7.5
74gb|AC016717.8| Homo sapiens BAC clone RP11-314B1 from 2, complet... 40 7.5
75gb|AC010181.17| Homo sapiens 3 BAC RP11-68L1 (Roswell Park Cance... 40 7.5
76gb|AC020611.15| Homo sapiens 12 BAC RP11-1029F8 (Roswell Park Ca... 40 7.5
77gb|BC046817.1| Mus musculus UBX domain containing 8, mRNA (cDNA ... 40 7.5
78gb|BC048767.1| Mus musculus UBX domain containing 8, mRNA (cDNA ... 40 7.5
79gb|AC091530.4| Papio anubis clone RP41-444A14, complete sequence 40 7.5
80gb|AF149774.1|HSNOD1G2 Homo sapiens NOD1 protein (NOD1) gene, ex... 40 7.5
81gb|AF113925.1|AF113925 Homo sapiens Nod1 mRNA, complete cds 40 7.5
82gb|AF126484.1|AF126484 Homo sapiens CARD4 mRNA, complete cds 40 7.5
83dbj|AB096633.1| Caenorhabditis elegans lrs-2 mRNA for leucyl-tRN... 40 7.5
84dbj|AK122394.1| Mus musculus mRNA for mKIAA0887 protein 40 7.5
85gb|AC162526.3| Mus musculus BAC clone RP23-50I19 from chromosome... 40 7.5 
>emb|X98124.1|HVJIP H.vulgare gene encoding jasmonate-induced protein
          Length = 2897

 Score =  462 bits (233), Expect = e-127
 Identities = 269/281 (95%)
 Strand = Plus / Plus

                                                                        
Query: 109  aggtacggtaacggaatagctgtaaaatgcctcctctacaatgccactggtgccactttg 168
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2304 aggtacggtaacggaatagctgtaaaatgcctcatctacaatgccactggtgccactttg 2363

                                                                        
Query: 169  aactttgctaagtacaacgattggcacggccatatctatgatacaccctacccatcagat 228
            | ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2364 agcttggctaagtacaacgattggcacggccatatctatgatactccctacccatcagat 2423

                                                                        
Query: 229  attcagaatgggcaatggggtgcattcctccacgtccacccaagtggagctgccgctggt 288
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||
Sbjct: 2424 attcagaatgggcaatggggtgcattcctccacgtccacccaagtggtgctgcggttggt 2483

                                                                        
Query: 289  tcagctggtgccgttgtgtatcgtagcaagatcccctccagcagcagctcctgcgattgg 348
            ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 2484 tcagctggtgccgttgtgtatcgtaccaagatcccctccagcagcaggtcctgcgattgg 2543

                                                     
Query: 349  ttgttctcttggaccgtcccctacattggtggcaacggggt 389
            |||||||| ||||||| |||||||||||||| |||||||||
Sbjct: 2544 ttgttctcctggaccgccccctacattggtgacaacggggt 2584



 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/97 (90%), Gaps = 1/97 (1%)
 Strand = Plus / Plus

                                                                        
Query: 9    aacccattacccaaaagna-gttgcagactatgccatgaagatgatcaacgccggtggta 67
            |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2074 aacccattactcaaaaggatgttgcagactatgccatgaagatgatcaacgccggtggta 2133

                                                 
Query: 68   aggatgttaacgcgcaaaagttcgtcgacaacctcaa 104
            ||||| ||||||| | ||  ||||||||||| |||||
Sbjct: 2134 aggatattaacgcactaaccttcgtcgacaatctcaa 2170
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>gb|AC068051.7| Homo sapiens BAC clone RP11-172J1 from 2, complete sequence
          Length = 122076

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 222   atcagatattcagaatgggcaa 243
             ||||||||||||||||||||||
Sbjct: 72577 atcagatattcagaatgggcaa 72556
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>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 165     tttgaactttgctaagtacaac 186
               ||||||||||||||||||||||
Sbjct: 1607181 tttgaactttgctaagtacaac 1607160
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>emb|CR733803.2|CNS0GSZE Tetraodon nigroviridis full-length cDNA
          Length = 686

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR711764.2|CNS0GC5C Tetraodon nigroviridis full-length cDNA
          Length = 722

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 246 cctccagcagcagctcctgcg 266
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>emb|CR716404.2|CNS0GFQ5 Tetraodon nigroviridis full-length cDNA
          Length = 718

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR708959.2|CNS0G9ZF Tetraodon nigroviridis full-length cDNA
          Length = 722

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 246 cctccagcagcagctcctgcg 266
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>emb|CR699377.2|CNS0G2L9 Tetraodon nigroviridis full-length cDNA
          Length = 742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 238 cctccagcagcagctcctgcg 258
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>emb|CR698020.2|CNS0G1JK Tetraodon nigroviridis full-length cDNA
          Length = 834

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 334 cctccagcagcagctcctgcg 354
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>emb|CR696410.2|CNS0G0AU Tetraodon nigroviridis full-length cDNA
          Length = 744

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR696296.2|CNS0G07O Tetraodon nigroviridis full-length cDNA
          Length = 700

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 199 cctccagcagcagctcctgcg 219
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>emb|CR695497.2|CNS0FZLH Tetraodon nigroviridis full-length cDNA
          Length = 747

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR692536.2|CNS0FXB8 Tetraodon nigroviridis full-length cDNA
          Length = 555

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 77  cctccagcagcagctcctgcg 97
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>emb|CR689433.2|CNS0FUX1 Tetraodon nigroviridis full-length cDNA
          Length = 730

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 252 cctccagcagcagctcctgcg 272
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>emb|CR680402.2|CNS0FNY6 Tetraodon nigroviridis full-length cDNA
          Length = 747

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR677964.2|CNS0FM2S Tetraodon nigroviridis full-length cDNA
          Length = 747

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 242 cctccagcagcagctcctgcg 262
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>emb|CR677142.2|CNS0FLG2 Tetraodon nigroviridis full-length cDNA
          Length = 745

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR676082.2|CNS0FKMW Tetraodon nigroviridis full-length cDNA
          Length = 679

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 237 cctccagcagcagctcctgcg 257
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>emb|CR675727.2|CNS0FKD1 Tetraodon nigroviridis full-length cDNA
          Length = 753

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 236 cctccagcagcagctcctgcg 256
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>emb|CR675512.2|CNS0FK72 Tetraodon nigroviridis full-length cDNA
          Length = 742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR674041.2|CNS0FJ27 Tetraodon nigroviridis full-length cDNA
          Length = 724

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 241 cctccagcagcagctcctgcg 261
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>emb|CR673710.2|CNS0FIT0 Tetraodon nigroviridis full-length cDNA
          Length = 756

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 273 cctccagcagcagctcctgcg 293
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>emb|CR671918.2|CNS0FHF8 Tetraodon nigroviridis full-length cDNA
          Length = 745

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR671342.2|CNS0FGZ8 Tetraodon nigroviridis full-length cDNA
          Length = 735

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 236 cctccagcagcagctcctgcg 256
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>emb|CR670529.2|CNS0FGCN Tetraodon nigroviridis full-length cDNA
          Length = 745

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 241 cctccagcagcagctcctgcg 261
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>emb|CR669878.2|CNS0FFUK Tetraodon nigroviridis full-length cDNA
          Length = 812

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 238 cctccagcagcagctcctgcg 258
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>emb|CR669596.2|CNS0FFMQ Tetraodon nigroviridis full-length cDNA
          Length = 751

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 245 cctccagcagcagctcctgcg 265
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>emb|CR668449.2|CNS0FEQV Tetraodon nigroviridis full-length cDNA
          Length = 732

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 230 cctccagcagcagctcctgcg 250
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>emb|CR667750.2|CNS0FE7G Tetraodon nigroviridis full-length cDNA
          Length = 739

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 236 cctccagcagcagctcctgcg 256
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>emb|CR667585.2|CNS0FE2V Tetraodon nigroviridis full-length cDNA
          Length = 728

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 228 cctccagcagcagctcctgcg 248
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>emb|CR665342.2|CNS0FCCK Tetraodon nigroviridis full-length cDNA
          Length = 675

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 241 cctccagcagcagctcctgcg 261
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>emb|CR664863.2|CNS0FBZ9 Tetraodon nigroviridis full-length cDNA
          Length = 744

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 243 cctccagcagcagctcctgcg 263
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>emb|CR664097.2|CNS0FBDZ Tetraodon nigroviridis full-length cDNA
          Length = 734

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 236 cctccagcagcagctcctgcg 256
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>emb|CR661788.2|CNS0F9LU Tetraodon nigroviridis full-length cDNA
          Length = 751

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 246 cctccagcagcagctcctgcg 266
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>emb|CR660976.2|CNS0F8ZA Tetraodon nigroviridis full-length cDNA
          Length = 654

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 235 cctccagcagcagctcctgcg 255
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>emb|CR660605.2|CNS0F8OZ Tetraodon nigroviridis full-length cDNA
          Length = 758

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 252 cctccagcagcagctcctgcg 272
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>emb|CR659570.2|CNS0F7W8 Tetraodon nigroviridis full-length cDNA
          Length = 711

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 213 cctccagcagcagctcctgcg 233
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>emb|CR659084.2|CNS0F7IQ Tetraodon nigroviridis full-length cDNA
          Length = 747

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
to top
>emb|CR651699.2|CNS0F1TL Tetraodon nigroviridis full-length cDNA
          Length = 756

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 252 cctccagcagcagctcctgcg 272
to top
>emb|CR651536.2|CNS0F1P2 Tetraodon nigroviridis full-length cDNA
          Length = 743

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
to top
>emb|CR651336.2|CNS0F1JI Tetraodon nigroviridis full-length cDNA
          Length = 757

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 236 cctccagcagcagctcctgcg 256
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>emb|CR650557.2|CNS0F0XV Tetraodon nigroviridis full-length cDNA
          Length = 722

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 246 cctccagcagcagctcctgcg 266
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>emb|CR649305.2|CNS0EZZ3 Tetraodon nigroviridis full-length cDNA
          Length = 740

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 236 cctccagcagcagctcctgcg 256
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>emb|CR648318.2|CNS0EZ7O Tetraodon nigroviridis full-length cDNA
          Length = 743

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR646958.2|CNS0EY5W Tetraodon nigroviridis full-length cDNA
          Length = 743

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR645869.2|CNS0EXBN Tetraodon nigroviridis full-length cDNA
          Length = 736

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 236 cctccagcagcagctcctgcg 256
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>emb|CR644577.2|CNS0EWBR Tetraodon nigroviridis full-length cDNA
          Length = 742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 236 cctccagcagcagctcctgcg 256
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>emb|CR643036.2|CNS0EV4Y Tetraodon nigroviridis full-length cDNA
          Length = 749

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 246 cctccagcagcagctcctgcg 266
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>emb|CR641795.2|CNS0EU6H Tetraodon nigroviridis full-length cDNA
          Length = 688

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 236 cctccagcagcagctcctgcg 256
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>emb|CR638894.2|CNS0ERXW Tetraodon nigroviridis full-length cDNA
          Length = 734

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 236 cctccagcagcagctcctgcg 256
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>emb|CR638268.2|CNS0ERGI Tetraodon nigroviridis full-length cDNA
          Length = 749

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 246 cctccagcagcagctcctgcg 266
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>emb|CR637928.2|CNS0ER72 Tetraodon nigroviridis full-length cDNA
          Length = 686

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR636839.2|CNS0EQCT Tetraodon nigroviridis full-length cDNA
          Length = 736

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR635741.2|CNS0EPIB Tetraodon nigroviridis full-length cDNA
          Length = 757

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 254 cctccagcagcagctcctgcg 274
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>emb|CR634961.2|CNS0EOWN Tetraodon nigroviridis full-length cDNA
          Length = 737

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR634400.2|CNS0EOH2 Tetraodon nigroviridis full-length cDNA
          Length = 742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 244 cctccagcagcagctcctgcg 264
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>emb|CR634390.2|CNS0EOGS Tetraodon nigroviridis full-length cDNA
          Length = 740

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 cctccagcagcagctcctgcg 343
           |||||||||||||||||||||
Sbjct: 236 cctccagcagcagctcctgcg 256
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>gb|AC096917.3| Homo sapiens chromosome 3 clone RP11-94D19, complete sequence
          Length = 170184

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    ctatgccatgaagatgatcaa 56
             |||||||||||||||||||||
Sbjct: 15554 ctatgccatgaagatgatcaa 15574
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>gb|AF152363.1|AF152363 Homo sapiens constitutive fragile region FRA3B sequence
          Length = 185763

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 36     ctatgccatgaagatgatcaa 56
              |||||||||||||||||||||
Sbjct: 152410 ctatgccatgaagatgatcaa 152430
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>ref|NM_178397.2| Mus musculus UBX domain containing 8 (Ubxd8), mRNA
          Length = 4304

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  ccctccagcagcagctcctg 341
            ||||||||||||||||||||
Sbjct: 1683 ccctccagcagcagctcctg 1702
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>gb|AC006027.5| Homo sapiens BAC clone GS1-114I9 from 7, complete sequence
          Length = 68769

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 317   agatcccctccagcagcagctcct 340
             ||||| ||||||||||||||||||
Sbjct: 64110 agatctcctccagcagcagctcct 64133
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>gb|AY187250.1| Homo sapiens CARD4 isoform 2 (CARD4) mRNA, partial sequence;
           alternatively spliced
          Length = 493

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 317 agatcccctccagcagcagctcct 340
           ||||| ||||||||||||||||||
Sbjct: 59  agatctcctccagcagcagctcct 36
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>gb|AY187249.1| Homo sapiens CARD4 isoform 1 (CARD4) mRNA, partial sequence;
           alternatively spliced
          Length = 629

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 317 agatcccctccagcagcagctcct 340
           ||||| ||||||||||||||||||
Sbjct: 59  agatctcctccagcagcagctcct 36
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>emb|Z73912.1|CEZK524 Caenorhabditis elegans Cosmid ZK524, complete sequence
          Length = 30190

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 455   tgaagctgaaaaattcaagt 474
             ||||||||||||||||||||
Sbjct: 21860 tgaagctgaaaaattcaagt 21841
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>gb|BC040339.1| Homo sapiens caspase recruitment domain family, member 4, mRNA
           (cDNA clone MGC:17074 IMAGE:4338930), complete cds
          Length = 4422

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 317 agatcccctccagcagcagctcct 340
           ||||| ||||||||||||||||||
Sbjct: 913 agatctcctccagcagcagctcct 890
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>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    ctccagcagcagctcctgcg 343
              ||||||||||||||||||||
Sbjct: 109837 ctccagcagcagctcctgcg 109856
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>ref|NM_006092.1| Homo sapiens caspase recruitment domain family, member 4 (CARD4),
           mRNA
          Length = 4390

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 317 agatcccctccagcagcagctcct 340
           ||||| ||||||||||||||||||
Sbjct: 899 agatctcctccagcagcagctcct 876
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>dbj|AK023969.1| Homo sapiens cDNA FLJ13907 fis, clone Y79AA1000033, highly similar
           to Homo sapiens CARD4 mRNA
          Length = 4610

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 317 agatcccctccagcagcagctcct 340
           ||||| ||||||||||||||||||
Sbjct: 959 agatctcctccagcagcagctcct 936
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>dbj|AK151617.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830032D22 product:ETEA homolog [Homo
            sapiens], full insert sequence
          Length = 1750

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  ccctccagcagcagctcctg 341
            ||||||||||||||||||||
Sbjct: 1626 ccctccagcagcagctcctg 1645
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>dbj|AK148529.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length
            enriched library, clone:C820018J06 product:ETEA homolog
            [Homo sapiens], full insert sequence
          Length = 4286

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  ccctccagcagcagctcctg 341
            ||||||||||||||||||||
Sbjct: 1683 ccctccagcagcagctcctg 1702
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>dbj|AK170111.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630018A15
            product:ETEA homolog [Homo sapiens], full insert sequence
          Length = 1939

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  ccctccagcagcagctcctg 341
            ||||||||||||||||||||
Sbjct: 1705 ccctccagcagcagctcctg 1724
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>ref|NM_001026704.2| Caenorhabditis elegans Leucyl tRNA Synthetase family member (lrs-2)
            (lrs-2) mRNA, complete cds
          Length = 2583

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 455  tgaagctgaaaaattcaagt 474
            ||||||||||||||||||||
Sbjct: 2387 tgaagctgaaaaattcaagt 2406
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>ref|NM_001026705.2| Caenorhabditis elegans Leucyl tRNA Synthetase family member (lrs-2)
            (lrs-2) mRNA, complete cds
          Length = 2733

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 455  tgaagctgaaaaattcaagt 474
            ||||||||||||||||||||
Sbjct: 2387 tgaagctgaaaaattcaagt 2406
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>gb|AC016717.8| Homo sapiens BAC clone RP11-314B1 from 2, complete sequence
          Length = 210558

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 144   ctacaatgccactggtgccacttt 167
             |||||||||||||||| |||||||
Sbjct: 18137 ctacaatgccactggtcccacttt 18114
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>gb|AC010181.17| Homo sapiens 3 BAC RP11-68L1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 29651

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 319   atcccctccagcagcagctcctgc 342
             ||||||||||||| ||||||||||
Sbjct: 27082 atcccctccagcatcagctcctgc 27059
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>gb|AC020611.15| Homo sapiens 12 BAC RP11-1029F8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188972

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 45     gaagatgatcaacgccggtggtaa 68
              ||||||||||||||| ||||||||
Sbjct: 160083 gaagatgatcaacgctggtggtaa 160060
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>gb|BC046817.1| Mus musculus UBX domain containing 8, mRNA (cDNA clone MGC:61375
            IMAGE:5702561), complete cds
          Length = 4304

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  ccctccagcagcagctcctg 341
            ||||||||||||||||||||
Sbjct: 1683 ccctccagcagcagctcctg 1702
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>gb|BC048767.1| Mus musculus UBX domain containing 8, mRNA (cDNA clone IMAGE:6330214)
          Length = 1684

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  ccctccagcagcagctcctg 341
            ||||||||||||||||||||
Sbjct: 1529 ccctccagcagcagctcctg 1548
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>gb|AC091530.4| Papio anubis clone RP41-444A14, complete sequence
          Length = 162413

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 317   agatcccctccagcagcagctcct 340
             ||||| ||||||||||||||||||
Sbjct: 70565 agatctcctccagcagcagctcct 70588
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>gb|AF149774.1|HSNOD1G2 Homo sapiens NOD1 protein (NOD1) gene, exons 4 through 14 and
            complete cds
          Length = 34223

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 317  agatcccctccagcagcagctcct 340
            ||||| ||||||||||||||||||
Sbjct: 4464 agatctcctccagcagcagctcct 4441
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>gb|AF113925.1|AF113925 Homo sapiens Nod1 mRNA, complete cds
          Length = 4390

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 317 agatcccctccagcagcagctcct 340
           ||||| ||||||||||||||||||
Sbjct: 899 agatctcctccagcagcagctcct 876
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>gb|AF126484.1|AF126484 Homo sapiens CARD4 mRNA, complete cds
          Length = 3589

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 317 agatcccctccagcagcagctcct 340
           ||||| ||||||||||||||||||
Sbjct: 926 agatctcctccagcagcagctcct 903
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>dbj|AB096633.1| Caenorhabditis elegans lrs-2 mRNA for leucyl-tRNA synthetase
            (mitochondrial), complete cds
          Length = 2649

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 455  tgaagctgaaaaattcaagt 474
            ||||||||||||||||||||
Sbjct: 2291 tgaagctgaaaaattcaagt 2310
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>dbj|AK122394.1| Mus musculus mRNA for mKIAA0887 protein
          Length = 4221

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  ccctccagcagcagctcctg 341
            ||||||||||||||||||||
Sbjct: 1617 ccctccagcagcagctcctg 1636
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>gb|AC162526.3| Mus musculus BAC clone RP23-50I19 from chromosome 13, complete sequence
          Length = 219418

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   ccctccagcagcagctcctg 341
             ||||||||||||||||||||
Sbjct: 84180 ccctccagcagcagctcctg 84199


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,422,752
Number of Sequences: 3902068
Number of extensions: 4422752
Number of successful extensions: 80913
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80807
Number of HSP's gapped (non-prelim): 106
length of query: 554
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 531
effective length of database: 17,143,297,704
effective search space: 9103091080824
effective search space used: 9103091080824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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