ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalp09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_196491.1| Oryza sativa (japonica cultivar-group) putative... 355 1e-94
2dbj|AK066606.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 1e-94
3dbj|AK070876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 1e-94
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
5gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 157 5e-35
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 157 5e-35
7emb|AL049550.5|HSDJ90L14 Human DNA sequence from clone RP1-90L14... 46 0.13
8gb|BT013753.1| Lycopersicon esculentum clone 132619F, mRNA sequence 44 0.51
9gb|AC119432.7| Mus musculus chromosome 18, clone RP24-114K9, com... 44 0.51
10emb|AL954362.9| Mouse DNA sequence from clone RP23-345L22 on chr... 44 0.51
11gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome... 42 2.0
12emb|CR859434.1| Pongo pygmaeus mRNA; cDNA DKFZp469D0325 (from cl... 42 2.0
13emb|CR857494.1| Pongo pygmaeus mRNA; cDNA DKFZp468M1024 (from cl... 42 2.0
14dbj|AB026640.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.0
15ref|NM_117537.2| Arabidopsis thaliana unknown protein AT4G14570 ... 40 7.9
16ref|NM_196492.1| Oryza sativa (japonica cultivar-group) putative... 40 7.9
17ref|NM_186072.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.9
18gb|AC158514.2| Mus musculus BAC clone RP24-480D16 from chromosom... 40 7.9
19gb|AC149610.1| Mus musculus BAC clone RP23-263D11 from chromosom... 40 7.9
20gb|AC117219.2| Mus musculus BAC clone RP23-344D18 from chromosom... 40 7.9
21emb|AL157712.14| Human DNA sequence from clone RP11-339B9 on chr... 40 7.9
22gb|AC073427.7| Homo sapiens BAC clone RP11-746K19 from 4, comple... 40 7.9
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
24dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
25gb|AC159712.7| Mus musculus BAC RP23-236J3 (Roswell Park Cancer... 40 7.9
26gb|AC010894.10| Homo sapiens BAC clone RP11-483E17 from 2, compl... 40 7.9
27dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
28dbj|AP003207.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
29dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
30dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
31dbj|AB109759.1| Arabidopsis thaliana aare mRNA for acylamino aci... 40 7.9
32dbj|AK066318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
33dbj|AK061088.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
34emb|CR847537.9| Zebrafish DNA sequence from clone DKEYP-79B2 in ... 40 7.9

>ref|NM_196491.1| Oryza sativa (japonica cultivar-group) putative
           acylaminoacyl-peptidase like protein (OSJNBa0032I20.4),
           mRNA
          Length = 2346

 Score =  355 bits (179), Expect = 1e-94
 Identities = 474/571 (83%), Gaps = 4/571 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cacatctcaaaag-ttcctcaaantcagtgagtttccagtggtctcccttcccggttgaa 70
           ||||||||||||  ||||||||| || |||  |||||||||||||||||||||  | |||
Sbjct: 241 cacatctcaaaaaattcctcaaattctgtggatttccagtggtctcccttcccaatcgaa 300

                                                                       
Query: 71  atgagcggagtgtcagcagttgttccatcaccatccggngaaaagcttctgctggtacga 130
           ||||| ||||| ||||||||  ||||||| ||||| ||   ||| ||| | ||  |||| 
Sbjct: 301 atgagtggagtttcagcagtaattccatcgccatctgggagaaaacttttactaatacgg 360

                                                                       
Query: 131 aatgctgaggacgatgactcccctacaaaattagagatttgggggccctgtcaattggag 190
           ||| ||||||| |||   |||||||||||| ||||  ||||||| |||||||| ||||||
Sbjct: 361 aattctgaggatgat---tcccctacaaaactagaagtttggggcccctgtcagttggag 417

                                                                       
Query: 191 aacgaaatacatattgcacaatctattcatggatctctgtatgccgatggatggtttgaa 250
           ||||| || || |||||||||||| |||||||||| || |||| ||| | ||||||||||
Sbjct: 418 aacgagattcacattgcacaatctgttcatggatcactctatgtcgacgaatggtttgaa 477

                                                                       
Query: 251 gggatttcatggaaccaagaagaaactcttatagcttatgttgctgaggagcctcctcaa 310
           ||||| || ||||| |||||||| ||| |  ||||||| |||||||||||||||||||||
Sbjct: 478 gggatatcgtggaatcaagaagagactttagtagcttacgttgctgaggagcctcctcaa 537

                                                                       
Query: 311 ccaaagccagagttcaatgatttaggttacaggaaggaaggttcatctcaaaaggactgc 370
           || |||||||| |||||||||| ||| |||| |||||  || || ||| |||| ||||||
Sbjct: 538 ccgaagccagaattcaatgattcaggatacaagaaggctggctcgtctgaaaaagactgc 597

                                                                       
Query: 371 aggagctggaagggacaaggggatacagaagataactggggagaaacctatagtaagaaa 430
           | ||||||||||||| ||||||||   ||||| |  ||||||||||| |||   ||||||
Sbjct: 598 aagagctggaagggaaaaggggattgggaagaaacttggggagaaacgtattccaagaaa 657

                                                                       
Query: 431 aggatacctgctttgttcgccgctaacatctctagtggtgaagtacgagctttgaagggt 490
           ||||||||||| |||||||  |  ||||| || || |||||||| |||||| ||||||| 
Sbjct: 658 aggatacctgcattgttcgtggtcaacatttcaagcggtgaagtgcgagctgtgaagggc 717

                                                                       
Query: 491 atacctagatcattgagtgttggccaggtgatttgggctccatcgtcttcatatagtttg 550
           ||||| ||| |||| ||||||||||| ||||||||||||||||| || ||| ||||  ||
Sbjct: 718 ataccgagaacattaagtgttggccaagtgatttgggctccatcatcatcacatagcctg 777

                                          
Query: 551 gtttttgtggcatggtcagatgataatggtt 581
           ||||||||||| ||||||  |||||||||||
Sbjct: 778 gtttttgtggcgtggtcatctgataatggtt 808



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>dbj|AK066606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071P22, full
            insert sequence
          Length = 1667

 Score =  355 bits (179), Expect = 1e-94
 Identities = 474/571 (83%), Gaps = 4/571 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cacatctcaaaag-ttcctcaaantcagtgagtttccagtggtctcccttcccggttgaa 70
            ||||||||||||  ||||||||| || |||  |||||||||||||||||||||  | |||
Sbjct: 461  cacatctcaaaaaattcctcaaattctgtggatttccagtggtctcccttcccaatcgaa 520

                                                                        
Query: 71   atgagcggagtgtcagcagttgttccatcaccatccggngaaaagcttctgctggtacga 130
            ||||| ||||| ||||||||  ||||||| ||||| ||   ||| ||| | ||  |||| 
Sbjct: 521  atgagtggagtttcagcagtaattccatcgccatctgggagaaaacttttactaatacgg 580

                                                                        
Query: 131  aatgctgaggacgatgactcccctacaaaattagagatttgggggccctgtcaattggag 190
            ||| ||||||| |||   |||||||||||| ||||  ||||||| |||||||| ||||||
Sbjct: 581  aattctgaggatgat---tcccctacaaaactagaagtttggggcccctgtcagttggag 637

                                                                        
Query: 191  aacgaaatacatattgcacaatctattcatggatctctgtatgccgatggatggtttgaa 250
            ||||| || || |||||||||||| |||||||||| || |||| ||| | ||||||||||
Sbjct: 638  aacgagattcacattgcacaatctgttcatggatcactctatgtcgacgaatggtttgaa 697

                                                                        
Query: 251  gggatttcatggaaccaagaagaaactcttatagcttatgttgctgaggagcctcctcaa 310
            ||||| || ||||| |||||||| ||| |  ||||||| |||||||||||||||||||||
Sbjct: 698  gggatatcgtggaatcaagaagagactttagtagcttacgttgctgaggagcctcctcaa 757

                                                                        
Query: 311  ccaaagccagagttcaatgatttaggttacaggaaggaaggttcatctcaaaaggactgc 370
            || |||||||| |||||||||| ||| |||| |||||  || || ||| |||| ||||||
Sbjct: 758  ccgaagccagaattcaatgattcaggatacaagaaggctggctcgtctgaaaaagactgc 817

                                                                        
Query: 371  aggagctggaagggacaaggggatacagaagataactggggagaaacctatagtaagaaa 430
            | ||||||||||||| ||||||||   ||||| |  ||||||||||| |||   ||||||
Sbjct: 818  aagagctggaagggaaaaggggattgggaagaaacttggggagaaacgtattccaagaaa 877

                                                                        
Query: 431  aggatacctgctttgttcgccgctaacatctctagtggtgaagtacgagctttgaagggt 490
            ||||||||||| |||||||  |  ||||| || || |||||||| |||||| ||||||| 
Sbjct: 878  aggatacctgcattgttcgtggtcaacatttcaagcggtgaagtgcgagctgtgaagggc 937

                                                                        
Query: 491  atacctagatcattgagtgttggccaggtgatttgggctccatcgtcttcatatagtttg 550
            ||||| ||| |||| ||||||||||| ||||||||||||||||| || ||| ||||  ||
Sbjct: 938  ataccgagaacattaagtgttggccaagtgatttgggctccatcatcatcacatagcctg 997

                                           
Query: 551  gtttttgtggcatggtcagatgataatggtt 581
            ||||||||||| ||||||  |||||||||||
Sbjct: 998  gtttttgtggcgtggtcatctgataatggtt 1028



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>dbj|AK070876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072L05, full
           insert sequence
          Length = 2875

 Score =  355 bits (179), Expect = 1e-94
 Identities = 474/571 (83%), Gaps = 4/571 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cacatctcaaaag-ttcctcaaantcagtgagtttccagtggtctcccttcccggttgaa 70
           ||||||||||||  ||||||||| || |||  |||||||||||||||||||||  | |||
Sbjct: 391 cacatctcaaaaaattcctcaaattctgtggatttccagtggtctcccttcccaatcgaa 450

                                                                       
Query: 71  atgagcggagtgtcagcagttgttccatcaccatccggngaaaagcttctgctggtacga 130
           ||||| ||||| ||||||||  ||||||| ||||| ||   ||| ||| | ||  |||| 
Sbjct: 451 atgagtggagtttcagcagtaattccatcgccatctgggagaaaacttttactaatacgg 510

                                                                       
Query: 131 aatgctgaggacgatgactcccctacaaaattagagatttgggggccctgtcaattggag 190
           ||| ||||||| |||   |||||||||||| ||||  ||||||| |||||||| ||||||
Sbjct: 511 aattctgaggatgat---tcccctacaaaactagaagtttggggcccctgtcagttggag 567

                                                                       
Query: 191 aacgaaatacatattgcacaatctattcatggatctctgtatgccgatggatggtttgaa 250
           ||||| || || |||||||||||| |||||||||| || |||| ||| | ||||||||||
Sbjct: 568 aacgagattcacattgcacaatctgttcatggatcactctatgtcgacgaatggtttgaa 627

                                                                       
Query: 251 gggatttcatggaaccaagaagaaactcttatagcttatgttgctgaggagcctcctcaa 310
           ||||| || ||||| |||||||| ||| |  ||||||| |||||||||||||||||||||
Sbjct: 628 gggatatcgtggaatcaagaagagactttagtagcttacgttgctgaggagcctcctcaa 687

                                                                       
Query: 311 ccaaagccagagttcaatgatttaggttacaggaaggaaggttcatctcaaaaggactgc 370
           || |||||||| |||||||||| ||| |||| |||||  || || ||| |||| ||||||
Sbjct: 688 ccgaagccagaattcaatgattcaggatacaagaaggctggctcgtctgaaaaagactgc 747

                                                                       
Query: 371 aggagctggaagggacaaggggatacagaagataactggggagaaacctatagtaagaaa 430
           | ||||||||||||| ||||||||   ||||| |  ||||||||||| |||   ||||||
Sbjct: 748 aagagctggaagggaaaaggggattgggaagaaacttggggagaaacgtattccaagaaa 807

                                                                       
Query: 431 aggatacctgctttgttcgccgctaacatctctagtggtgaagtacgagctttgaagggt 490
           ||||||||||| |||||||  |  ||||| || || |||||||| |||||| ||||||| 
Sbjct: 808 aggatacctgcattgttcgtggtcaacatttcaagcggtgaagtgcgagctgtgaagggc 867

                                                                       
Query: 491 atacctagatcattgagtgttggccaggtgatttgggctccatcgtcttcatatagtttg 550
           ||||| ||| |||| ||||||||||| ||||||||||||||||| || ||| ||||  ||
Sbjct: 868 ataccgagaacattaagtgttggccaagtgatttgggctccatcatcatcacatagcctg 927

                                          
Query: 551 gtttttgtggcatggtcagatgataatggtt 581
           ||||||||||| ||||||  |||||||||||
Sbjct: 928 gtttttgtggcgtggtcatctgataatggtt 958



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  157 bits (79), Expect = 5e-35
 Identities = 175/207 (84%)
 Strand = Plus / Plus

                                                                            
Query: 243      ggtttgaagggatttcatggaaccaagaagaaactcttatagcttatgttgctgaggagc 302
                ||||||||||||| || ||||| |||||||| ||| |  ||||||| |||||||||||||
Sbjct: 14023192 ggtttgaagggatatcgtggaatcaagaagagactttagtagcttacgttgctgaggagc 14023251

                                                                            
Query: 303      ctcctcaaccaaagccagagttcaatgatttaggttacaggaaggaaggttcatctcaaa 362
                |||||||||| |||||||| |||||||||| ||| |||| |||||  || || ||| |||
Sbjct: 14023252 ctcctcaaccgaagccagaattcaatgattcaggatacaagaaggctggctcgtctgaaa 14023311

                                                                            
Query: 363      aggactgcaggagctggaagggacaaggggatacagaagataactggggagaaacctata 422
                | ||||||| ||||||||||||| ||||||||   ||||| |  ||||||||||| ||| 
Sbjct: 14023312 aagactgcaagagctggaagggaaaaggggattgggaagaaacttggggagaaacgtatt 14023371

                                           
Query: 423      gtaagaaaaggatacctgctttgttcg 449
                  ||||||||||||||||| |||||||
Sbjct: 14023372 ccaagaaaaggatacctgcattgttcg 14023398



 Score =  117 bits (59), Expect = 4e-23
 Identities = 177/215 (82%), Gaps = 4/215 (1%)
 Strand = Plus / Plus

                                                                            
Query: 12       cacatctcaaaag-ttcctcaaantcagtgagtttccagtggtctcccttcccggttgaa 70
                ||||||||||||  ||||||||| || |||  |||||||||||||||||||||  | |||
Sbjct: 14022820 cacatctcaaaaaattcctcaaattctgtggatttccagtggtctcccttcccaatcgaa 14022879

                                                                            
Query: 71       atgagcggagtgtcagcagttgttccatcaccatccggngaaaagcttctgctggtacga 130
                ||||| ||||| ||||||||  ||||||| ||||| ||   ||| ||| | ||  |||| 
Sbjct: 14022880 atgagtggagtttcagcagtaattccatcgccatctgggagaaaacttttactaatacgg 14022939

                                                                            
Query: 131      aatgctgaggacgatgactcccctacaaaattagagatttgggggccctgtcaattggag 190
                ||| ||||||| |||   |||||||||||| ||||  ||||||| |||||||| ||||||
Sbjct: 14022940 aattctgaggatgat---tcccctacaaaactagaagtttggggcccctgtcagttggag 14022996

                                                   
Query: 191      aacgaaatacatattgcacaatctattcatggatc 225
                ||||| || || |||||||||||| ||||||||||
Sbjct: 14022997 aacgagattcacattgcacaatctgttcatggatc 14023031



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                            
Query: 467      ggtgaagtacgagctttgaagggtatacctagatcattgagtgttggccaggtgatttgg 526
                |||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| |||||||||
Sbjct: 14023498 ggtgaagtgcgagctgtgaagggcataccgagaacattaagtgttggccaagtgatttgg 14023557

                                                                       
Query: 527      gctccatcgtcttcatatagtttggtttttgtggcatggtcagatgataatggtt 581
                |||||||| || ||| ||||  ||||||||||||| ||||||  |||||||||||
Sbjct: 14023558 gctccatcatcatcacatagcctggtttttgtggcgtggtcatctgataatggtt 14023612



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>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score =  157 bits (79), Expect = 5e-35
 Identities = 175/207 (84%)
 Strand = Plus / Plus

                                                                         
Query: 243   ggtttgaagggatttcatggaaccaagaagaaactcttatagcttatgttgctgaggagc 302
             ||||||||||||| || ||||| |||||||| ||| |  ||||||| |||||||||||||
Sbjct: 39321 ggtttgaagggatatcgtggaatcaagaagagactttagtagcttacgttgctgaggagc 39380

                                                                         
Query: 303   ctcctcaaccaaagccagagttcaatgatttaggttacaggaaggaaggttcatctcaaa 362
             |||||||||| |||||||| |||||||||| ||| |||| |||||  || || ||| |||
Sbjct: 39381 ctcctcaaccgaagccagaattcaatgattcaggatacaagaaggctggctcgtctgaaa 39440

                                                                         
Query: 363   aggactgcaggagctggaagggacaaggggatacagaagataactggggagaaacctata 422
             | ||||||| ||||||||||||| ||||||||   ||||| |  ||||||||||| ||| 
Sbjct: 39441 aagactgcaagagctggaagggaaaaggggattgggaagaaacttggggagaaacgtatt 39500

                                        
Query: 423   gtaagaaaaggatacctgctttgttcg 449
               ||||||||||||||||| |||||||
Sbjct: 39501 ccaagaaaaggatacctgcattgttcg 39527



 Score =  117 bits (59), Expect = 4e-23
 Identities = 177/215 (82%), Gaps = 4/215 (1%)
 Strand = Plus / Plus

                                                                         
Query: 12    cacatctcaaaag-ttcctcaaantcagtgagtttccagtggtctcccttcccggttgaa 70
             ||||||||||||  ||||||||| || |||  |||||||||||||||||||||  | |||
Sbjct: 38949 cacatctcaaaaaattcctcaaattctgtggatttccagtggtctcccttcccaatcgaa 39008

                                                                         
Query: 71    atgagcggagtgtcagcagttgttccatcaccatccggngaaaagcttctgctggtacga 130
             ||||| ||||| ||||||||  ||||||| ||||| ||   ||| ||| | ||  |||| 
Sbjct: 39009 atgagtggagtttcagcagtaattccatcgccatctgggagaaaacttttactaatacgg 39068

                                                                         
Query: 131   aatgctgaggacgatgactcccctacaaaattagagatttgggggccctgtcaattggag 190
             ||| ||||||| |||   |||||||||||| ||||  ||||||| |||||||| ||||||
Sbjct: 39069 aattctgaggatgat---tcccctacaaaactagaagtttggggcccctgtcagttggag 39125

                                                
Query: 191   aacgaaatacatattgcacaatctattcatggatc 225
             ||||| || || |||||||||||| ||||||||||
Sbjct: 39126 aacgagattcacattgcacaatctgttcatggatc 39160



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                         
Query: 467   ggtgaagtacgagctttgaagggtatacctagatcattgagtgttggccaggtgatttgg 526
             |||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| |||||||||
Sbjct: 39627 ggtgaagtgcgagctgtgaagggcataccgagaacattaagtgttggccaagtgatttgg 39686

                                                                    
Query: 527   gctccatcgtcttcatatagtttggtttttgtggcatggtcagatgataatggtt 581
             |||||||| || ||| ||||  ||||||||||||| ||||||  |||||||||||
Sbjct: 39687 gctccatcatcatcacatagcctggtttttgtggcgtggtcatctgataatggtt 39741



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  157 bits (79), Expect = 5e-35
 Identities = 175/207 (84%)
 Strand = Plus / Plus

                                                                            
Query: 243      ggtttgaagggatttcatggaaccaagaagaaactcttatagcttatgttgctgaggagc 302
                ||||||||||||| || ||||| |||||||| ||| |  ||||||| |||||||||||||
Sbjct: 14031434 ggtttgaagggatatcgtggaatcaagaagagactttagtagcttacgttgctgaggagc 14031493

                                                                            
Query: 303      ctcctcaaccaaagccagagttcaatgatttaggttacaggaaggaaggttcatctcaaa 362
                |||||||||| |||||||| |||||||||| ||| |||| |||||  || || ||| |||
Sbjct: 14031494 ctcctcaaccgaagccagaattcaatgattcaggatacaagaaggctggctcgtctgaaa 14031553

                                                                            
Query: 363      aggactgcaggagctggaagggacaaggggatacagaagataactggggagaaacctata 422
                | ||||||| ||||||||||||| ||||||||   ||||| |  ||||||||||| ||| 
Sbjct: 14031554 aagactgcaagagctggaagggaaaaggggattgggaagaaacttggggagaaacgtatt 14031613

                                           
Query: 423      gtaagaaaaggatacctgctttgttcg 449
                  ||||||||||||||||| |||||||
Sbjct: 14031614 ccaagaaaaggatacctgcattgttcg 14031640



 Score =  117 bits (59), Expect = 4e-23
 Identities = 177/215 (82%), Gaps = 4/215 (1%)
 Strand = Plus / Plus

                                                                            
Query: 12       cacatctcaaaag-ttcctcaaantcagtgagtttccagtggtctcccttcccggttgaa 70
                ||||||||||||  ||||||||| || |||  |||||||||||||||||||||  | |||
Sbjct: 14031062 cacatctcaaaaaattcctcaaattctgtggatttccagtggtctcccttcccaatcgaa 14031121

                                                                            
Query: 71       atgagcggagtgtcagcagttgttccatcaccatccggngaaaagcttctgctggtacga 130
                ||||| ||||| ||||||||  ||||||| ||||| ||   ||| ||| | ||  |||| 
Sbjct: 14031122 atgagtggagtttcagcagtaattccatcgccatctgggagaaaacttttactaatacgg 14031181

                                                                            
Query: 131      aatgctgaggacgatgactcccctacaaaattagagatttgggggccctgtcaattggag 190
                ||| ||||||| |||   |||||||||||| ||||  ||||||| |||||||| ||||||
Sbjct: 14031182 aattctgaggatgat---tcccctacaaaactagaagtttggggcccctgtcagttggag 14031238

                                                   
Query: 191      aacgaaatacatattgcacaatctattcatggatc 225
                ||||| || || |||||||||||| ||||||||||
Sbjct: 14031239 aacgagattcacattgcacaatctgttcatggatc 14031273



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                            
Query: 467      ggtgaagtacgagctttgaagggtatacctagatcattgagtgttggccaggtgatttgg 526
                |||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| |||||||||
Sbjct: 14031740 ggtgaagtgcgagctgtgaagggcataccgagaacattaagtgttggccaagtgatttgg 14031799

                                                                       
Query: 527      gctccatcgtcttcatatagtttggtttttgtggcatggtcagatgataatggtt 581
                |||||||| || ||| ||||  ||||||||||||| ||||||  |||||||||||
Sbjct: 14031800 gctccatcatcatcacatagcctggtttttgtggcgtggtcatctgataatggtt 14031854



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>emb|AL049550.5|HSDJ90L14 Human DNA sequence from clone RP1-90L14 on chromosome 6q14.1-15
             Contains the 3' end of a novel gene, complete sequence
          Length = 104594

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 13    acatctcaaaagttcctcaaantcag 38
             ||||||||||||||||||||| ||||
Sbjct: 81907 acatctcaaaagttcctcaaactcag 81882



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>gb|BT013753.1| Lycopersicon esculentum clone 132619F, mRNA sequence
          Length = 2620

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 211 atctattcatggatctctgtatgccgatggatggtttgaagggatttcatggaa 264
           |||||| ||||||||| | ||| | ||||||||||| || |||||||| |||||
Sbjct: 536 atctatccatggatctgtatattctgatggatggttcgaggggatttcctggaa 589



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>gb|AC119432.7| Mus musculus chromosome 18, clone RP24-114K9, complete sequence
          Length = 190138

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 211    atctattcatggatctctgtat 232
              ||||||||||||||||||||||
Sbjct: 127670 atctattcatggatctctgtat 127691



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>emb|AL954362.9| Mouse DNA sequence from clone RP23-345L22 on chromosome X, complete
             sequence
          Length = 199559

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 232   tgccgatggatggtttgaagggattt 257
             |||||||||||||||| |||||||||
Sbjct: 43517 tgccgatggatggtttcaagggattt 43542



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>gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome 1, complete
            sequence
          Length = 154695

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 542  tatagtttggtttttgtggca 562
            |||||||||||||||||||||
Sbjct: 3092 tatagtttggtttttgtggca 3072



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>emb|CR859434.1| Pongo pygmaeus mRNA; cDNA DKFZp469D0325 (from clone DKFZp469D0325)
          Length = 2784

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 208  acaatctattcatggatctct 228
            |||||||||||||||||||||
Sbjct: 1319 acaatctattcatggatctct 1339



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>emb|CR857494.1| Pongo pygmaeus mRNA; cDNA DKFZp468M1024 (from clone DKFZp468M1024)
          Length = 2374

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 208 acaatctattcatggatctct 228
           |||||||||||||||||||||
Sbjct: 918 acaatctattcatggatctct 938



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>dbj|AB026640.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8A10
          Length = 31132

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 268   agaagaaactcttatagctta 288
             |||||||||||||||||||||
Sbjct: 21175 agaagaaactcttatagctta 21195



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>ref|NM_117537.2| Arabidopsis thaliana unknown protein AT4G14570 mRNA, complete cds
          Length = 2423

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 gatggatggtttgaagggat 255
           ||||||||||||||||||||
Sbjct: 448 gatggatggtttgaagggat 467



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>ref|NM_196492.1| Oryza sativa (japonica cultivar-group) putative
           acylaminoacyl-peptidase like protein (OSJNBa0032I20.5),
           mRNA
          Length = 2406

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 242 tggtttgaagggatttcatggaaccaagaaga 273
           |||||| | |||||||| ||||||||||||||
Sbjct: 415 tggtttcatgggatttcctggaaccaagaaga 446



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>ref|NM_186072.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 951

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 368 tgcaggagctggaagggaca 387
           ||||||||||||||||||||
Sbjct: 788 tgcaggagctggaagggaca 807



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>gb|AC158514.2| Mus musculus BAC clone RP24-480D16 from chromosome 12, complete sequence
          Length = 204825

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    tcatctcaaaaggactgcag 372
              ||||||||||||||||||||
Sbjct: 179991 tcatctcaaaaggactgcag 180010



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>gb|AC149610.1| Mus musculus BAC clone RP23-263D11 from chromosome 9, complete sequence
          Length = 187063

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 380    aagggacaaggggatacaga 399
              ||||||||||||||||||||
Sbjct: 156838 aagggacaaggggatacaga 156857



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>gb|AC117219.2| Mus musculus BAC clone RP23-344D18 from chromosome 9, complete sequence
          Length = 216199

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   aagggacaaggggatacaga 399
             ||||||||||||||||||||
Sbjct: 52566 aagggacaaggggatacaga 52585



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>emb|AL157712.14| Human DNA sequence from clone RP11-339B9 on chromosome 10 Contains two
             CpG islands, complete sequence
          Length = 131112

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   ccctacaaaattagagattt 170
             ||||||||||||||||||||
Sbjct: 67129 ccctacaaaattagagattt 67148



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>gb|AC073427.7| Homo sapiens BAC clone RP11-746K19 from 4, complete sequence
          Length = 157152

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   agctggaagggacaagggga 393
             ||||||||||||||||||||
Sbjct: 84239 agctggaagggacaagggga 84220



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 368      tgcaggagctggaagggaca 387
                ||||||||||||||||||||
Sbjct: 28021126 tgcaggagctggaagggaca 28021145



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 260      tggaaccaagaagaaactct 279
                ||||||||||||||||||||
Sbjct: 14373852 tggaaccaagaagaaactct 14373833



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>gb|AC159712.7| Mus musculus  BAC RP23-236J3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 221910

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    cagtgagtttccagtggtct 55
             ||||||||||||||||||||
Sbjct: 83401 cagtgagtttccagtggtct 83382



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>gb|AC010894.10| Homo sapiens BAC clone RP11-483E17 from 2, complete sequence
          Length = 181663

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   gaaccaagaagaaactctta 281
             ||||||||||||||||||||
Sbjct: 91852 gaaccaagaagaaactctta 91833



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>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1343_D04
          Length = 143407

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 368    tgcaggagctggaagggaca 387
              ||||||||||||||||||||
Sbjct: 110460 tgcaggagctggaagggaca 110479



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>dbj|AP003207.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1157F09
          Length = 148802

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    tggaaccaagaagaaactct 279
              ||||||||||||||||||||
Sbjct: 125129 tggaaccaagaagaaactct 125110



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>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0025H06
          Length = 151547

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 260   tggaaccaagaagaaactct 279
             ||||||||||||||||||||
Sbjct: 35249 tggaaccaagaagaaactct 35230



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>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0450A04
          Length = 162545

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 368  tgcaggagctggaagggaca 387
            ||||||||||||||||||||
Sbjct: 4422 tgcaggagctggaagggaca 4441



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>dbj|AB109759.1| Arabidopsis thaliana aare mRNA for acylamino acid-releasing enzyme,
           complete cds
          Length = 2295

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 gatggatggtttgaagggat 255
           ||||||||||||||||||||
Sbjct: 448 gatggatggtttgaagggat 467



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>dbj|AK066318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067G13, full
           insert sequence
          Length = 2732

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 242 tggtttgaagggatttcatggaaccaagaaga 273
           |||||| | |||||||| ||||||||||||||
Sbjct: 553 tggtttcatgggatttcctggaaccaagaaga 584



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>dbj|AK061088.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-G08, full
           insert sequence
          Length = 1031

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 tgcaggagctggaagggaca 387
           ||||||||||||||||||||
Sbjct: 191 tgcaggagctggaagggaca 172



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>emb|CR847537.9| Zebrafish DNA sequence from clone DKEYP-79B2 in linkage group 3,
             complete sequence
          Length = 144825

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 156   caaaattagagatttgggggccct 179
             |||| |||||||||||||||||||
Sbjct: 54590 caaacttagagatttgggggccct 54567


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,497,239
Number of Sequences: 3902068
Number of extensions: 6497239
Number of successful extensions: 95388
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95177
Number of HSP's gapped (non-prelim): 205
length of query: 584
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 561
effective length of database: 17,143,297,704
effective search space: 9617390011944
effective search space used: 9617390011944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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