Clone Name | baalp09 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_196491.1| Oryza sativa (japonica cultivar-group) putative acylaminoacyl-peptidase like protein (OSJNBa0032I20.4), mRNA Length = 2346 Score = 355 bits (179), Expect = 1e-94 Identities = 474/571 (83%), Gaps = 4/571 (0%) Strand = Plus / Plus Query: 12 cacatctcaaaag-ttcctcaaantcagtgagtttccagtggtctcccttcccggttgaa 70 |||||||||||| ||||||||| || ||| ||||||||||||||||||||| | ||| Sbjct: 241 cacatctcaaaaaattcctcaaattctgtggatttccagtggtctcccttcccaatcgaa 300 Query: 71 atgagcggagtgtcagcagttgttccatcaccatccggngaaaagcttctgctggtacga 130 ||||| ||||| |||||||| ||||||| ||||| || ||| ||| | || |||| Sbjct: 301 atgagtggagtttcagcagtaattccatcgccatctgggagaaaacttttactaatacgg 360 Query: 131 aatgctgaggacgatgactcccctacaaaattagagatttgggggccctgtcaattggag 190 ||| ||||||| ||| |||||||||||| |||| ||||||| |||||||| |||||| Sbjct: 361 aattctgaggatgat---tcccctacaaaactagaagtttggggcccctgtcagttggag 417 Query: 191 aacgaaatacatattgcacaatctattcatggatctctgtatgccgatggatggtttgaa 250 ||||| || || |||||||||||| |||||||||| || |||| ||| | |||||||||| Sbjct: 418 aacgagattcacattgcacaatctgttcatggatcactctatgtcgacgaatggtttgaa 477 Query: 251 gggatttcatggaaccaagaagaaactcttatagcttatgttgctgaggagcctcctcaa 310 ||||| || ||||| |||||||| ||| | ||||||| ||||||||||||||||||||| Sbjct: 478 gggatatcgtggaatcaagaagagactttagtagcttacgttgctgaggagcctcctcaa 537 Query: 311 ccaaagccagagttcaatgatttaggttacaggaaggaaggttcatctcaaaaggactgc 370 || |||||||| |||||||||| ||| |||| ||||| || || ||| |||| |||||| Sbjct: 538 ccgaagccagaattcaatgattcaggatacaagaaggctggctcgtctgaaaaagactgc 597 Query: 371 aggagctggaagggacaaggggatacagaagataactggggagaaacctatagtaagaaa 430 | ||||||||||||| |||||||| ||||| | ||||||||||| ||| |||||| Sbjct: 598 aagagctggaagggaaaaggggattgggaagaaacttggggagaaacgtattccaagaaa 657 Query: 431 aggatacctgctttgttcgccgctaacatctctagtggtgaagtacgagctttgaagggt 490 ||||||||||| ||||||| | ||||| || || |||||||| |||||| ||||||| Sbjct: 658 aggatacctgcattgttcgtggtcaacatttcaagcggtgaagtgcgagctgtgaagggc 717 Query: 491 atacctagatcattgagtgttggccaggtgatttgggctccatcgtcttcatatagtttg 550 ||||| ||| |||| ||||||||||| ||||||||||||||||| || ||| |||| || Sbjct: 718 ataccgagaacattaagtgttggccaagtgatttgggctccatcatcatcacatagcctg 777 Query: 551 gtttttgtggcatggtcagatgataatggtt 581 ||||||||||| |||||| ||||||||||| Sbjct: 778 gtttttgtggcgtggtcatctgataatggtt 808
>dbj|AK066606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071P22, full insert sequence Length = 1667 Score = 355 bits (179), Expect = 1e-94 Identities = 474/571 (83%), Gaps = 4/571 (0%) Strand = Plus / Plus Query: 12 cacatctcaaaag-ttcctcaaantcagtgagtttccagtggtctcccttcccggttgaa 70 |||||||||||| ||||||||| || ||| ||||||||||||||||||||| | ||| Sbjct: 461 cacatctcaaaaaattcctcaaattctgtggatttccagtggtctcccttcccaatcgaa 520 Query: 71 atgagcggagtgtcagcagttgttccatcaccatccggngaaaagcttctgctggtacga 130 ||||| ||||| |||||||| ||||||| ||||| || ||| ||| | || |||| Sbjct: 521 atgagtggagtttcagcagtaattccatcgccatctgggagaaaacttttactaatacgg 580 Query: 131 aatgctgaggacgatgactcccctacaaaattagagatttgggggccctgtcaattggag 190 ||| ||||||| ||| |||||||||||| |||| ||||||| |||||||| |||||| Sbjct: 581 aattctgaggatgat---tcccctacaaaactagaagtttggggcccctgtcagttggag 637 Query: 191 aacgaaatacatattgcacaatctattcatggatctctgtatgccgatggatggtttgaa 250 ||||| || || |||||||||||| |||||||||| || |||| ||| | |||||||||| Sbjct: 638 aacgagattcacattgcacaatctgttcatggatcactctatgtcgacgaatggtttgaa 697 Query: 251 gggatttcatggaaccaagaagaaactcttatagcttatgttgctgaggagcctcctcaa 310 ||||| || ||||| |||||||| ||| | ||||||| ||||||||||||||||||||| Sbjct: 698 gggatatcgtggaatcaagaagagactttagtagcttacgttgctgaggagcctcctcaa 757 Query: 311 ccaaagccagagttcaatgatttaggttacaggaaggaaggttcatctcaaaaggactgc 370 || |||||||| |||||||||| ||| |||| ||||| || || ||| |||| |||||| Sbjct: 758 ccgaagccagaattcaatgattcaggatacaagaaggctggctcgtctgaaaaagactgc 817 Query: 371 aggagctggaagggacaaggggatacagaagataactggggagaaacctatagtaagaaa 430 | ||||||||||||| |||||||| ||||| | ||||||||||| ||| |||||| Sbjct: 818 aagagctggaagggaaaaggggattgggaagaaacttggggagaaacgtattccaagaaa 877 Query: 431 aggatacctgctttgttcgccgctaacatctctagtggtgaagtacgagctttgaagggt 490 ||||||||||| ||||||| | ||||| || || |||||||| |||||| ||||||| Sbjct: 878 aggatacctgcattgttcgtggtcaacatttcaagcggtgaagtgcgagctgtgaagggc 937 Query: 491 atacctagatcattgagtgttggccaggtgatttgggctccatcgtcttcatatagtttg 550 ||||| ||| |||| ||||||||||| ||||||||||||||||| || ||| |||| || Sbjct: 938 ataccgagaacattaagtgttggccaagtgatttgggctccatcatcatcacatagcctg 997 Query: 551 gtttttgtggcatggtcagatgataatggtt 581 ||||||||||| |||||| ||||||||||| Sbjct: 998 gtttttgtggcgtggtcatctgataatggtt 1028
>dbj|AK070876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072L05, full insert sequence Length = 2875 Score = 355 bits (179), Expect = 1e-94 Identities = 474/571 (83%), Gaps = 4/571 (0%) Strand = Plus / Plus Query: 12 cacatctcaaaag-ttcctcaaantcagtgagtttccagtggtctcccttcccggttgaa 70 |||||||||||| ||||||||| || ||| ||||||||||||||||||||| | ||| Sbjct: 391 cacatctcaaaaaattcctcaaattctgtggatttccagtggtctcccttcccaatcgaa 450 Query: 71 atgagcggagtgtcagcagttgttccatcaccatccggngaaaagcttctgctggtacga 130 ||||| ||||| |||||||| ||||||| ||||| || ||| ||| | || |||| Sbjct: 451 atgagtggagtttcagcagtaattccatcgccatctgggagaaaacttttactaatacgg 510 Query: 131 aatgctgaggacgatgactcccctacaaaattagagatttgggggccctgtcaattggag 190 ||| ||||||| ||| |||||||||||| |||| ||||||| |||||||| |||||| Sbjct: 511 aattctgaggatgat---tcccctacaaaactagaagtttggggcccctgtcagttggag 567 Query: 191 aacgaaatacatattgcacaatctattcatggatctctgtatgccgatggatggtttgaa 250 ||||| || || |||||||||||| |||||||||| || |||| ||| | |||||||||| Sbjct: 568 aacgagattcacattgcacaatctgttcatggatcactctatgtcgacgaatggtttgaa 627 Query: 251 gggatttcatggaaccaagaagaaactcttatagcttatgttgctgaggagcctcctcaa 310 ||||| || ||||| |||||||| ||| | ||||||| ||||||||||||||||||||| Sbjct: 628 gggatatcgtggaatcaagaagagactttagtagcttacgttgctgaggagcctcctcaa 687 Query: 311 ccaaagccagagttcaatgatttaggttacaggaaggaaggttcatctcaaaaggactgc 370 || |||||||| |||||||||| ||| |||| ||||| || || ||| |||| |||||| Sbjct: 688 ccgaagccagaattcaatgattcaggatacaagaaggctggctcgtctgaaaaagactgc 747 Query: 371 aggagctggaagggacaaggggatacagaagataactggggagaaacctatagtaagaaa 430 | ||||||||||||| |||||||| ||||| | ||||||||||| ||| |||||| Sbjct: 748 aagagctggaagggaaaaggggattgggaagaaacttggggagaaacgtattccaagaaa 807 Query: 431 aggatacctgctttgttcgccgctaacatctctagtggtgaagtacgagctttgaagggt 490 ||||||||||| ||||||| | ||||| || || |||||||| |||||| ||||||| Sbjct: 808 aggatacctgcattgttcgtggtcaacatttcaagcggtgaagtgcgagctgtgaagggc 867 Query: 491 atacctagatcattgagtgttggccaggtgatttgggctccatcgtcttcatatagtttg 550 ||||| ||| |||| ||||||||||| ||||||||||||||||| || ||| |||| || Sbjct: 868 ataccgagaacattaagtgttggccaagtgatttgggctccatcatcatcacatagcctg 927 Query: 551 gtttttgtggcatggtcagatgataatggtt 581 ||||||||||| |||||| ||||||||||| Sbjct: 928 gtttttgtggcgtggtcatctgataatggtt 958
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 157 bits (79), Expect = 5e-35 Identities = 175/207 (84%) Strand = Plus / Plus Query: 243 ggtttgaagggatttcatggaaccaagaagaaactcttatagcttatgttgctgaggagc 302 ||||||||||||| || ||||| |||||||| ||| | ||||||| ||||||||||||| Sbjct: 14023192 ggtttgaagggatatcgtggaatcaagaagagactttagtagcttacgttgctgaggagc 14023251 Query: 303 ctcctcaaccaaagccagagttcaatgatttaggttacaggaaggaaggttcatctcaaa 362 |||||||||| |||||||| |||||||||| ||| |||| ||||| || || ||| ||| Sbjct: 14023252 ctcctcaaccgaagccagaattcaatgattcaggatacaagaaggctggctcgtctgaaa 14023311 Query: 363 aggactgcaggagctggaagggacaaggggatacagaagataactggggagaaacctata 422 | ||||||| ||||||||||||| |||||||| ||||| | ||||||||||| ||| Sbjct: 14023312 aagactgcaagagctggaagggaaaaggggattgggaagaaacttggggagaaacgtatt 14023371 Query: 423 gtaagaaaaggatacctgctttgttcg 449 ||||||||||||||||| ||||||| Sbjct: 14023372 ccaagaaaaggatacctgcattgttcg 14023398 Score = 117 bits (59), Expect = 4e-23 Identities = 177/215 (82%), Gaps = 4/215 (1%) Strand = Plus / Plus Query: 12 cacatctcaaaag-ttcctcaaantcagtgagtttccagtggtctcccttcccggttgaa 70 |||||||||||| ||||||||| || ||| ||||||||||||||||||||| | ||| Sbjct: 14022820 cacatctcaaaaaattcctcaaattctgtggatttccagtggtctcccttcccaatcgaa 14022879 Query: 71 atgagcggagtgtcagcagttgttccatcaccatccggngaaaagcttctgctggtacga 130 ||||| ||||| |||||||| ||||||| ||||| || ||| ||| | || |||| Sbjct: 14022880 atgagtggagtttcagcagtaattccatcgccatctgggagaaaacttttactaatacgg 14022939 Query: 131 aatgctgaggacgatgactcccctacaaaattagagatttgggggccctgtcaattggag 190 ||| ||||||| ||| |||||||||||| |||| ||||||| |||||||| |||||| Sbjct: 14022940 aattctgaggatgat---tcccctacaaaactagaagtttggggcccctgtcagttggag 14022996 Query: 191 aacgaaatacatattgcacaatctattcatggatc 225 ||||| || || |||||||||||| |||||||||| Sbjct: 14022997 aacgagattcacattgcacaatctgttcatggatc 14023031 Score = 109 bits (55), Expect = 1e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 467 ggtgaagtacgagctttgaagggtatacctagatcattgagtgttggccaggtgatttgg 526 |||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| ||||||||| Sbjct: 14023498 ggtgaagtgcgagctgtgaagggcataccgagaacattaagtgttggccaagtgatttgg 14023557 Query: 527 gctccatcgtcttcatatagtttggtttttgtggcatggtcagatgataatggtt 581 |||||||| || ||| |||| ||||||||||||| |||||| ||||||||||| Sbjct: 14023558 gctccatcatcatcacatagcctggtttttgtggcgtggtcatctgataatggtt 14023612
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 157 bits (79), Expect = 5e-35 Identities = 175/207 (84%) Strand = Plus / Plus Query: 243 ggtttgaagggatttcatggaaccaagaagaaactcttatagcttatgttgctgaggagc 302 ||||||||||||| || ||||| |||||||| ||| | ||||||| ||||||||||||| Sbjct: 39321 ggtttgaagggatatcgtggaatcaagaagagactttagtagcttacgttgctgaggagc 39380 Query: 303 ctcctcaaccaaagccagagttcaatgatttaggttacaggaaggaaggttcatctcaaa 362 |||||||||| |||||||| |||||||||| ||| |||| ||||| || || ||| ||| Sbjct: 39381 ctcctcaaccgaagccagaattcaatgattcaggatacaagaaggctggctcgtctgaaa 39440 Query: 363 aggactgcaggagctggaagggacaaggggatacagaagataactggggagaaacctata 422 | ||||||| ||||||||||||| |||||||| ||||| | ||||||||||| ||| Sbjct: 39441 aagactgcaagagctggaagggaaaaggggattgggaagaaacttggggagaaacgtatt 39500 Query: 423 gtaagaaaaggatacctgctttgttcg 449 ||||||||||||||||| ||||||| Sbjct: 39501 ccaagaaaaggatacctgcattgttcg 39527 Score = 117 bits (59), Expect = 4e-23 Identities = 177/215 (82%), Gaps = 4/215 (1%) Strand = Plus / Plus Query: 12 cacatctcaaaag-ttcctcaaantcagtgagtttccagtggtctcccttcccggttgaa 70 |||||||||||| ||||||||| || ||| ||||||||||||||||||||| | ||| Sbjct: 38949 cacatctcaaaaaattcctcaaattctgtggatttccagtggtctcccttcccaatcgaa 39008 Query: 71 atgagcggagtgtcagcagttgttccatcaccatccggngaaaagcttctgctggtacga 130 ||||| ||||| |||||||| ||||||| ||||| || ||| ||| | || |||| Sbjct: 39009 atgagtggagtttcagcagtaattccatcgccatctgggagaaaacttttactaatacgg 39068 Query: 131 aatgctgaggacgatgactcccctacaaaattagagatttgggggccctgtcaattggag 190 ||| ||||||| ||| |||||||||||| |||| ||||||| |||||||| |||||| Sbjct: 39069 aattctgaggatgat---tcccctacaaaactagaagtttggggcccctgtcagttggag 39125 Query: 191 aacgaaatacatattgcacaatctattcatggatc 225 ||||| || || |||||||||||| |||||||||| Sbjct: 39126 aacgagattcacattgcacaatctgttcatggatc 39160 Score = 109 bits (55), Expect = 1e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 467 ggtgaagtacgagctttgaagggtatacctagatcattgagtgttggccaggtgatttgg 526 |||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| ||||||||| Sbjct: 39627 ggtgaagtgcgagctgtgaagggcataccgagaacattaagtgttggccaagtgatttgg 39686 Query: 527 gctccatcgtcttcatatagtttggtttttgtggcatggtcagatgataatggtt 581 |||||||| || ||| |||| ||||||||||||| |||||| ||||||||||| Sbjct: 39687 gctccatcatcatcacatagcctggtttttgtggcgtggtcatctgataatggtt 39741
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 157 bits (79), Expect = 5e-35 Identities = 175/207 (84%) Strand = Plus / Plus Query: 243 ggtttgaagggatttcatggaaccaagaagaaactcttatagcttatgttgctgaggagc 302 ||||||||||||| || ||||| |||||||| ||| | ||||||| ||||||||||||| Sbjct: 14031434 ggtttgaagggatatcgtggaatcaagaagagactttagtagcttacgttgctgaggagc 14031493 Query: 303 ctcctcaaccaaagccagagttcaatgatttaggttacaggaaggaaggttcatctcaaa 362 |||||||||| |||||||| |||||||||| ||| |||| ||||| || || ||| ||| Sbjct: 14031494 ctcctcaaccgaagccagaattcaatgattcaggatacaagaaggctggctcgtctgaaa 14031553 Query: 363 aggactgcaggagctggaagggacaaggggatacagaagataactggggagaaacctata 422 | ||||||| ||||||||||||| |||||||| ||||| | ||||||||||| ||| Sbjct: 14031554 aagactgcaagagctggaagggaaaaggggattgggaagaaacttggggagaaacgtatt 14031613 Query: 423 gtaagaaaaggatacctgctttgttcg 449 ||||||||||||||||| ||||||| Sbjct: 14031614 ccaagaaaaggatacctgcattgttcg 14031640 Score = 117 bits (59), Expect = 4e-23 Identities = 177/215 (82%), Gaps = 4/215 (1%) Strand = Plus / Plus Query: 12 cacatctcaaaag-ttcctcaaantcagtgagtttccagtggtctcccttcccggttgaa 70 |||||||||||| ||||||||| || ||| ||||||||||||||||||||| | ||| Sbjct: 14031062 cacatctcaaaaaattcctcaaattctgtggatttccagtggtctcccttcccaatcgaa 14031121 Query: 71 atgagcggagtgtcagcagttgttccatcaccatccggngaaaagcttctgctggtacga 130 ||||| ||||| |||||||| ||||||| ||||| || ||| ||| | || |||| Sbjct: 14031122 atgagtggagtttcagcagtaattccatcgccatctgggagaaaacttttactaatacgg 14031181 Query: 131 aatgctgaggacgatgactcccctacaaaattagagatttgggggccctgtcaattggag 190 ||| ||||||| ||| |||||||||||| |||| ||||||| |||||||| |||||| Sbjct: 14031182 aattctgaggatgat---tcccctacaaaactagaagtttggggcccctgtcagttggag 14031238 Query: 191 aacgaaatacatattgcacaatctattcatggatc 225 ||||| || || |||||||||||| |||||||||| Sbjct: 14031239 aacgagattcacattgcacaatctgttcatggatc 14031273 Score = 109 bits (55), Expect = 1e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 467 ggtgaagtacgagctttgaagggtatacctagatcattgagtgttggccaggtgatttgg 526 |||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| ||||||||| Sbjct: 14031740 ggtgaagtgcgagctgtgaagggcataccgagaacattaagtgttggccaagtgatttgg 14031799 Query: 527 gctccatcgtcttcatatagtttggtttttgtggcatggtcagatgataatggtt 581 |||||||| || ||| |||| ||||||||||||| |||||| ||||||||||| Sbjct: 14031800 gctccatcatcatcacatagcctggtttttgtggcgtggtcatctgataatggtt 14031854
>emb|AL049550.5|HSDJ90L14 Human DNA sequence from clone RP1-90L14 on chromosome 6q14.1-15 Contains the 3' end of a novel gene, complete sequence Length = 104594 Score = 46.1 bits (23), Expect = 0.13 Identities = 25/26 (96%) Strand = Plus / Minus Query: 13 acatctcaaaagttcctcaaantcag 38 ||||||||||||||||||||| |||| Sbjct: 81907 acatctcaaaagttcctcaaactcag 81882
>gb|BT013753.1| Lycopersicon esculentum clone 132619F, mRNA sequence Length = 2620 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 211 atctattcatggatctctgtatgccgatggatggtttgaagggatttcatggaa 264 |||||| ||||||||| | ||| | ||||||||||| || |||||||| ||||| Sbjct: 536 atctatccatggatctgtatattctgatggatggttcgaggggatttcctggaa 589
>gb|AC119432.7| Mus musculus chromosome 18, clone RP24-114K9, complete sequence Length = 190138 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 211 atctattcatggatctctgtat 232 |||||||||||||||||||||| Sbjct: 127670 atctattcatggatctctgtat 127691
>emb|AL954362.9| Mouse DNA sequence from clone RP23-345L22 on chromosome X, complete sequence Length = 199559 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 232 tgccgatggatggtttgaagggattt 257 |||||||||||||||| ||||||||| Sbjct: 43517 tgccgatggatggtttcaagggattt 43542
>gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome 1, complete sequence Length = 154695 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 542 tatagtttggtttttgtggca 562 ||||||||||||||||||||| Sbjct: 3092 tatagtttggtttttgtggca 3072
>emb|CR859434.1| Pongo pygmaeus mRNA; cDNA DKFZp469D0325 (from clone DKFZp469D0325) Length = 2784 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 acaatctattcatggatctct 228 ||||||||||||||||||||| Sbjct: 1319 acaatctattcatggatctct 1339
>emb|CR857494.1| Pongo pygmaeus mRNA; cDNA DKFZp468M1024 (from clone DKFZp468M1024) Length = 2374 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 acaatctattcatggatctct 228 ||||||||||||||||||||| Sbjct: 918 acaatctattcatggatctct 938
>dbj|AB026640.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8A10 Length = 31132 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 agaagaaactcttatagctta 288 ||||||||||||||||||||| Sbjct: 21175 agaagaaactcttatagctta 21195
>ref|NM_117537.2| Arabidopsis thaliana unknown protein AT4G14570 mRNA, complete cds Length = 2423 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gatggatggtttgaagggat 255 |||||||||||||||||||| Sbjct: 448 gatggatggtttgaagggat 467
>ref|NM_196492.1| Oryza sativa (japonica cultivar-group) putative acylaminoacyl-peptidase like protein (OSJNBa0032I20.5), mRNA Length = 2406 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 242 tggtttgaagggatttcatggaaccaagaaga 273 |||||| | |||||||| |||||||||||||| Sbjct: 415 tggtttcatgggatttcctggaaccaagaaga 446
>ref|NM_186072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 951 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 tgcaggagctggaagggaca 387 |||||||||||||||||||| Sbjct: 788 tgcaggagctggaagggaca 807
>gb|AC158514.2| Mus musculus BAC clone RP24-480D16 from chromosome 12, complete sequence Length = 204825 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tcatctcaaaaggactgcag 372 |||||||||||||||||||| Sbjct: 179991 tcatctcaaaaggactgcag 180010
>gb|AC149610.1| Mus musculus BAC clone RP23-263D11 from chromosome 9, complete sequence Length = 187063 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 aagggacaaggggatacaga 399 |||||||||||||||||||| Sbjct: 156838 aagggacaaggggatacaga 156857
>gb|AC117219.2| Mus musculus BAC clone RP23-344D18 from chromosome 9, complete sequence Length = 216199 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 aagggacaaggggatacaga 399 |||||||||||||||||||| Sbjct: 52566 aagggacaaggggatacaga 52585
>emb|AL157712.14| Human DNA sequence from clone RP11-339B9 on chromosome 10 Contains two CpG islands, complete sequence Length = 131112 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ccctacaaaattagagattt 170 |||||||||||||||||||| Sbjct: 67129 ccctacaaaattagagattt 67148
>gb|AC073427.7| Homo sapiens BAC clone RP11-746K19 from 4, complete sequence Length = 157152 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 agctggaagggacaagggga 393 |||||||||||||||||||| Sbjct: 84239 agctggaagggacaagggga 84220
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 tgcaggagctggaagggaca 387 |||||||||||||||||||| Sbjct: 28021126 tgcaggagctggaagggaca 28021145
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tggaaccaagaagaaactct 279 |||||||||||||||||||| Sbjct: 14373852 tggaaccaagaagaaactct 14373833
>gb|AC159712.7| Mus musculus BAC RP23-236J3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221910 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cagtgagtttccagtggtct 55 |||||||||||||||||||| Sbjct: 83401 cagtgagtttccagtggtct 83382
>gb|AC010894.10| Homo sapiens BAC clone RP11-483E17 from 2, complete sequence Length = 181663 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 gaaccaagaagaaactctta 281 |||||||||||||||||||| Sbjct: 91852 gaaccaagaagaaactctta 91833
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 tgcaggagctggaagggaca 387 |||||||||||||||||||| Sbjct: 110460 tgcaggagctggaagggaca 110479
>dbj|AP003207.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1157F09 Length = 148802 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tggaaccaagaagaaactct 279 |||||||||||||||||||| Sbjct: 125129 tggaaccaagaagaaactct 125110
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tggaaccaagaagaaactct 279 |||||||||||||||||||| Sbjct: 35249 tggaaccaagaagaaactct 35230
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 tgcaggagctggaagggaca 387 |||||||||||||||||||| Sbjct: 4422 tgcaggagctggaagggaca 4441
>dbj|AB109759.1| Arabidopsis thaliana aare mRNA for acylamino acid-releasing enzyme, complete cds Length = 2295 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gatggatggtttgaagggat 255 |||||||||||||||||||| Sbjct: 448 gatggatggtttgaagggat 467
>dbj|AK066318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067G13, full insert sequence Length = 2732 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 242 tggtttgaagggatttcatggaaccaagaaga 273 |||||| | |||||||| |||||||||||||| Sbjct: 553 tggtttcatgggatttcctggaaccaagaaga 584
>dbj|AK061088.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-G08, full insert sequence Length = 1031 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 tgcaggagctggaagggaca 387 |||||||||||||||||||| Sbjct: 191 tgcaggagctggaagggaca 172
>emb|CR847537.9| Zebrafish DNA sequence from clone DKEYP-79B2 in linkage group 3, complete sequence Length = 144825 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 caaaattagagatttgggggccct 179 |||| ||||||||||||||||||| Sbjct: 54590 caaacttagagatttgggggccct 54567 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,497,239 Number of Sequences: 3902068 Number of extensions: 6497239 Number of successful extensions: 95388 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95177 Number of HSP's gapped (non-prelim): 205 length of query: 584 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 561 effective length of database: 17,143,297,704 effective search space: 9617390011944 effective search space used: 9617390011944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)