>gb|AC137484.2| Rattus Norvegicus Strain BN/SsNHsd/MCW BAC, CH230-349A03, complete
              sequence
          Length = 164897

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 531    actgacttgttcatgttcttgt 552
              ||||||||||||||||||||||
Sbjct: 153090 actgacttgttcatgttcttgt 153111

>gb|AY591425.1| Ateles geoffroyi SMCX (SMCX) gene, partial cds
          Length = 2869

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 391  ccccaaattcgagatcctcct 411
            |||||||||||||||||||||
Sbjct: 2035 ccccaaattcgagatcctcct 2015

>gb|AC140368.3| Mus musculus BAC clone RP23-198E1 from 14, complete sequence
          Length = 177084

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 472   gatctgaaaataaaaacgaag 492
             |||||||||||||||||||||
Sbjct: 63298 gatctgaaaataaaaacgaag 63318

>ref|XM_883242.1| PREDICTED: Bos taurus hypothetical protein LOC617984 (LOC617984),
           partial mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 cgcggcgcttccttcccgga 309
           ||||||||||||||||||||
Sbjct: 644 cgcggcgcttccttcccgga 625

>gb|BC058692.1| Mus musculus RIKEN cDNA 1810042K04 gene, mRNA (cDNA clone MGC:63274
           IMAGE:6818127), complete cds
          Length = 823

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 436 ctgtttcctgcttcttgcga 455
           ||||||||||||||||||||
Sbjct: 407 ctgtttcctgcttcttgcga 388

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 620     ggcgcaatgtctgcggtaca 639
               ||||||||||||||||||||
Sbjct: 2438882 ggcgcaatgtctgcggtaca 2438901

>ref|NM_025604.1| Mus musculus RIKEN cDNA 1810042K04 gene (1810042K04Rik), mRNA
          Length = 840

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 436 ctgtttcctgcttcttgcga 455
           ||||||||||||||||||||
Sbjct: 422 ctgtttcctgcttcttgcga 403

>gb|AC130221.4| Mus musculus BAC clone RP23-168E11 from chromosome 5, complete sequence
          Length = 200384

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 436    ctgtttcctgcttcttgcga 455
              ||||||||||||||||||||
Sbjct: 108065 ctgtttcctgcttcttgcga 108084

>gb|BC027410.1| Mus musculus RIKEN cDNA 1810042K04 gene, mRNA (cDNA clone MGC:36857
           IMAGE:4237608), complete cds
          Length = 746

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 436 ctgtttcctgcttcttgcga 455
           ||||||||||||||||||||
Sbjct: 334 ctgtttcctgcttcttgcga 315

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 620     ggcgcaatgtctgcggtaca 639
               ||||||||||||||||||||
Sbjct: 1945676 ggcgcaatgtctgcggtaca 1945657

>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12,
             complete sequence
          Length = 116952

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 470   ttgatctgaaaataaaaacg 489
             ||||||||||||||||||||
Sbjct: 43293 ttgatctgaaaataaaaacg 43274

>emb|AJ311905.1|PWA311905 Pleurodeles waltl mRNA for Ikaros transcription factor
          Length = 1984

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 566 tttgcaggtagttctggcatcgct 589
           ||||||||||||| ||||||||||
Sbjct: 759 tttgcaggtagttgtggcatcgct 736

>gb|AC025816.1| Homo sapiens PAC clone RP5-907K21 from 7, complete sequence
          Length = 9021

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 562  tttgtttgcaggtagttctggcat 585
            |||||||||||||||| |||||||
Sbjct: 4579 tttgtttgcaggtagtcctggcat 4556

>dbj|AK012616.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2700096D16 product:SIMILAR TO
           RIKEN CDNA 1810042K04 GENE homolog [Homo sapiens], full
           insert sequence
          Length = 840

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 436 ctgtttcctgcttcttgcga 455
           ||||||||||||||||||||
Sbjct: 422 ctgtttcctgcttcttgcga 403

>dbj|AK007751.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810042K04
           product:unclassifiable, full insert sequence
          Length = 857

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 436 ctgtttcctgcttcttgcga 455
           ||||||||||||||||||||
Sbjct: 464 ctgtttcctgcttcttgcga 445

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 470      ttgatctgaaaataaaaacg 489
                ||||||||||||||||||||
Sbjct: 20532665 ttgatctgaaaataaaaacg 20532646

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 112      ccgctcctgcggttcgcaga 131
                ||||||||||||||||||||
Sbjct: 27016065 ccgctcctgcggttcgcaga 27016046

>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0461B08
          Length = 153743

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   ccgctcctgcggttcgcaga 131
             ||||||||||||||||||||
Sbjct: 69267 ccgctcctgcggttcgcaga 69248

>gb|AE000512.1| Thermotoga maritima MSB8, complete genome
          Length = 1860725

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 471   tgatctgaaaataaaaacga 490
             ||||||||||||||||||||
Sbjct: 41725 tgatctgaaaataaaaacga 41706

>gb|AC167333.3| Mus musculus BAC clone RP23-92L4 from chromosome 5, complete sequence
          Length = 236596

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   ctgtttcctgcttcttgcga 455
             ||||||||||||||||||||
Sbjct: 20817 ctgtttcctgcttcttgcga 20798

>dbj|AP004512.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10L16, TM0042,
            complete sequence
          Length = 85815

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 551  gtgctgctctgtttgtttgc 570
            ||||||||||||||||||||
Sbjct: 9580 gtgctgctctgtttgtttgc 9561


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,566,530
Number of Sequences: 3902068
Number of extensions: 4566530
Number of successful extensions: 73194
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72960
Number of HSP's gapped (non-prelim): 234
length of query: 639
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 616
effective length of database: 17,143,297,704
effective search space: 10560271385664
effective search space used: 10560271385664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)