ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalo24 |
|---|---|
| Clone Library Name | barley_pub |
>DBP2_CANAL (Q59LU0) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 562 Score = 273 bits (697), Expect = 4e-73 Identities = 131/171 (76%), Positives = 145/171 (84%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 +P PI F EA FPDY +Q + GF +PTPIQ QGWPMAL GRD+IGIA TGSGKTLSY Sbjct: 122 IPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSY 181 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LP +VH+ AQP+L+ GDGPIVL+LAPTRELAVQIQ E +KFG SR R+TC+YGGAPKG Sbjct: 182 CLPSIVHINAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKG 241 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 PQIRDL RGVEI IATPGRLIDMLEAG TNL+RVTYLVLDEADRMLDMGFE Sbjct: 242 PQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFE 292
>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 554 Score = 270 bits (689), Expect = 3e-72 Identities = 129/171 (75%), Positives = 142/171 (83%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 +P+P+ F EA FP Y + + GF PT IQ+QGWPMAL GRDV+GIAETGSGKTLSY Sbjct: 125 IPRPVETFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLSY 184 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LP +VH+ AQP L GDGPIVL+LAPTRELAVQIQAE TKFG SR R+TC+YGG PKG Sbjct: 185 CLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPKG 244 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 PQIRDL RGVE+ IATPGRLIDMLEAG TNLRRVTYLVLDEADRMLDMGFE Sbjct: 245 PQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFE 295
>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 563 Score = 269 bits (688), Expect = 4e-72 Identities = 130/171 (76%), Positives = 143/171 (83%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+P+ F EA FP Y + + GF +PT IQ+QGWPMAL GRDV+GIAETGSGKTLSY Sbjct: 135 VPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSY 194 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LP +VH+ AQP L GDGPIVLILAPTRELAVQIQAE +KFG SR R+TC+YGG PKG Sbjct: 195 CLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKG 254 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 PQIRDL RGVE+ IATPGRLIDMLEAG TNLRRVTYLVLDEADRMLDMGFE Sbjct: 255 PQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFE 305
>DBP2_ASPFU (Q4X195) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 547 Score = 267 bits (683), Expect = 1e-71 Identities = 129/171 (75%), Positives = 142/171 (83%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+P+ F EA FP Y + + GF PT IQ+QGWPMAL GRDV+GIAETGSGKTL+Y Sbjct: 116 VPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTY 175 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LP +VH+ AQP L GDGPIVLILAPTRELAVQIQAE +KFG SR R+TC+YGG PKG Sbjct: 176 CLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKG 235 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 PQIRDL RGVE+ IATPGRLIDMLEAG TNLRRVTYLVLDEADRMLDMGFE Sbjct: 236 PQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFE 286
>DBP2_DEBHA (Q6BY27) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 536 Score = 267 bits (682), Expect = 2e-71 Identities = 129/171 (75%), Positives = 143/171 (83%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 +PKPI F EA FPDY ++ + + GF +PT IQ QGWPMAL GRD++GIA TGSGKTLSY Sbjct: 100 IPKPITSFDEAGFPDYVLKEVKQQGFPKPTSIQCQGWPMALSGRDMVGIASTGSGKTLSY 159 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LP +VH+ AQP L GDGPIVL+LAPTRELAVQIQ E +KFGS SR R+TC+YGGAPKG Sbjct: 160 CLPSIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECSKFGSSSRIRNTCVYGGAPKG 219 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 QIRDL RGVEI IATPGRLIDMLE G TNLRRVTYLVLDEADRMLDMGFE Sbjct: 220 QQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFE 270
>DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-)| Length = 562 Score = 265 bits (678), Expect = 6e-71 Identities = 129/171 (75%), Positives = 141/171 (82%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VPKP+ F EA FP Y M + GF PT IQ+QGWPMAL GRDV+GIAETGSGKTL+Y Sbjct: 127 VPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTY 186 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LP +VH+ AQP L GDGPIVLILAPTRELAVQIQ E +KFG SR R+TC+YGG PKG Sbjct: 187 CLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKG 246 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 PQIRDL RGVE+ IATPGRLIDMLE+G TNLRRVTYLVLDEADRMLDMGFE Sbjct: 247 PQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFE 297
>DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 555 Score = 265 bits (677), Expect = 7e-71 Identities = 129/171 (75%), Positives = 140/171 (81%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VPKP+ F EA FP Y M + GF PT IQ+QGWPMAL GRDV+GIAETGSGKTL+Y Sbjct: 129 VPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTY 188 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LP +VH+ AQP L GDGPIVL+LAPTRELAVQIQ E KFG SR R+TC+YGG PKG Sbjct: 189 CLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKG 248 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 PQIRDL RGVE+ IATPGRLIDMLEAG TNLRRVTYLVLDEADRMLDMGFE Sbjct: 249 PQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFE 299
>DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 554 Score = 264 bits (675), Expect = 1e-70 Identities = 127/171 (74%), Positives = 143/171 (83%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VPKPIR F EA FP Y + + + GF +PT IQ QGWPMAL GRD+IG+A TGSGKTLSY Sbjct: 108 VPKPIRSFDEAGFPSYVLDEVKQEGFAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSY 167 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LPG+VH+ AQP L GDGPIVL+LAPTRELAVQIQ E +KFG+ SR R+TC+YGG PK Sbjct: 168 CLPGIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGASSRIRNTCVYGGVPKS 227 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 QIRDL+RGVEI+IATPGRLIDMLE G TNL+RVTYLVLDEADRMLDMGFE Sbjct: 228 QQIRDLQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFE 278
>DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 557 Score = 264 bits (674), Expect = 2e-70 Identities = 126/171 (73%), Positives = 144/171 (84%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VPKPIR F EA FP+Y ++ + + GF +PT IQ QGWPMAL GRD+IG+A TGSGKTLSY Sbjct: 109 VPKPIRTFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSY 168 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LPG+VH+ AQP L GDGP+VL+LAPTRELAVQIQ E +KFG SR R+TC+YGG PK Sbjct: 169 CLPGIVHINAQPLLSPGDGPVVLVLAPTRELAVQIQKECSKFGRSSRIRNTCVYGGVPKS 228 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 QIRDL+RGVEI+IATPGRLIDMLE G TNL+RVTYLVLDEADRMLDMGFE Sbjct: 229 QQIRDLQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFE 279
>DBP2_CANGA (Q6FLF3) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 544 Score = 262 bits (669), Expect = 6e-70 Identities = 126/171 (73%), Positives = 142/171 (83%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 +PKPI F EA FPDY ++ + GF +PT IQ QGWPMAL GRD++GIA TGSGKTLSY Sbjct: 105 IPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMVGIAATGSGKTLSY 164 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LPG+VH+ AQP L GDGPIVL+LAPTRELAVQIQ E +KFG SR R+TC+YGG P+G Sbjct: 165 CLPGIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPRG 224 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 QIR+L RG EIVIATPGRLIDMLEAG TNL+RVTYLVLDEADRMLDMGFE Sbjct: 225 QQIRELIRGAEIVIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFE 275
>DBP2_CRYNE (Q5KFM6) ATP-dependent RNA helicase DBP2-A (EC 3.6.1.-)| Length = 540 Score = 261 bits (668), Expect = 8e-70 Identities = 127/171 (74%), Positives = 141/171 (82%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+PI F EA FPDY M I + GF P+ IQ Q WPMAL GRD++ IAETGSGKT+S+ Sbjct: 105 VPRPITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISF 164 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LP +VH+ AQP L GDGPIVLILAPTRELAVQIQ EATKFG SR R+T IYGGAPKG Sbjct: 165 CLPAMVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKG 224 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 PQIRDL+RGVEI +ATPGRLIDMLE G TNL+RVTYLV+DEADRMLDMGFE Sbjct: 225 PQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFE 275
>DBP2_YARLI (Q6C4D4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 261 bits (668), Expect = 8e-70 Identities = 125/171 (73%), Positives = 142/171 (83%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 +PKP+ F EA FP Y ++ + + GF +PT IQ QGWPMAL GRDVIGIA TGSGKTLSY Sbjct: 111 IPKPVTNFDEAGFPPYVLKEVKQQGFEKPTAIQCQGWPMALTGRDVIGIASTGSGKTLSY 170 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LP +VH+ AQP L GDGPIVL+LAPTRELAVQIQ E +KFG S+ R+TC+YGG P+G Sbjct: 171 CLPAIVHINAQPMLSHGDGPIVLVLAPTRELAVQIQQECSKFGKSSKIRNTCVYGGVPRG 230 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 QIRDL RGVEIVIATPGRL+DMLE+G TNLRRVTYLVLDEADRMLDMGFE Sbjct: 231 QQIRDLARGVEIVIATPGRLLDMLESGKTNLRRVTYLVLDEADRMLDMGFE 281
>DBP2_YEAST (P24783) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) (DEAD box| protein 2) (p68-like protein) Length = 546 Score = 259 bits (662), Expect = 4e-69 Identities = 126/171 (73%), Positives = 139/171 (81%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 +PKPI F EA FPDY + + GF +PT IQ QGWPMAL GRD++GIA TGSGKTLSY Sbjct: 108 IPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSY 167 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LPG+VH+ AQP L GDGPIVL+LAPTRELAVQIQ E +KFG SR R+TC+YGG PK Sbjct: 168 CLPGIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKS 227 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 QIRDL RG EIVIATPGRLIDMLE G TNL+RVTYLVLDEADRMLDMGFE Sbjct: 228 QQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFE 278
>DBP2_SCHPO (P24782) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-) (p68-like| protein) Length = 550 Score = 258 bits (658), Expect = 1e-68 Identities = 122/171 (71%), Positives = 141/171 (82%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VPKP+ F EA FP+Y ++ + + GF PTPIQ Q WPMA+ GRD++GI+ TGSGKTLSY Sbjct: 117 VPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSY 176 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LP +VH+ AQP L GDGPIVL+LAPTRELAVQIQ E TKFG SR R+TC+YGG P+G Sbjct: 177 CLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRG 236 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 PQIRDL RGVEI IATPGRL+DML++ TNLRRVTYLVLDEADRMLDMGFE Sbjct: 237 PQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFE 287
>DDX17_MOUSE (Q501J6) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) Length = 650 Score = 254 bits (649), Expect = 1e-67 Identities = 124/176 (70%), Positives = 141/176 (80%), Gaps = 1/176 (0%) Frame = +3 Query: 72 RAGXV-PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSG 248 R G V PKP+ FH ANFP Y M + F EPTPIQ QG+P+AL GRD++GIA+TGSG Sbjct: 82 RGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSG 141 Query: 249 KTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYG 428 KTL+Y+LP +VH+ QP LE+GDGPI L+LAPTRELA Q+Q A +G SR +STCIYG Sbjct: 142 KTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYG 201 Query: 429 GAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GAPKGPQIRDL RGVEI IATPGRLID LE+G TNLRR TYLVLDEADRMLDMGFE Sbjct: 202 GAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFE 257
>DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD box protein p72) Length = 650 Score = 254 bits (649), Expect = 1e-67 Identities = 124/176 (70%), Positives = 141/176 (80%), Gaps = 1/176 (0%) Frame = +3 Query: 72 RAGXV-PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSG 248 R G V PKP+ FH ANFP Y M + F EPTPIQ QG+P+AL GRD++GIA+TGSG Sbjct: 82 RGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSG 141 Query: 249 KTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYG 428 KTL+Y+LP +VH+ QP LE+GDGPI L+LAPTRELA Q+Q A +G SR +STCIYG Sbjct: 142 KTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYG 201 Query: 429 GAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GAPKGPQIRDL RGVEI IATPGRLID LE+G TNLRR TYLVLDEADRMLDMGFE Sbjct: 202 GAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFE 257
>DBP2_USTMA (Q4PHU9) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 249 bits (636), Expect = 4e-66 Identities = 119/171 (69%), Positives = 137/171 (80%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VPKP+ F EA FPDY + I K GF EP+ IQ+Q WPMAL GRD++ IAETGSGKT+ + Sbjct: 125 VPKPVTSFDEAGFPDYILSEIKKMGFSEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGF 184 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LP +VH+ AQP L+ GDGPI LILAPTRELA QIQ E +FG SR R+ +YGG PKG Sbjct: 185 ALPAMVHINAQPLLKPGDGPIALILAPTRELANQIQVECNRFGGSSRLRTCAVYGGVPKG 244 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 PQIRDL+RG EI IATPGRLIDM++AG TNLRRVTYLV+DEADRMLDMGFE Sbjct: 245 PQIRDLQRGAEICIATPGRLIDMVDAGKTNLRRVTYLVMDEADRMLDMGFE 295
>DDX5_HUMAN (P17844) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) Length = 614 Score = 249 bits (635), Expect = 6e-66 Identities = 121/175 (69%), Positives = 138/175 (78%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 R PKP+ F+EANFP M IA+ F EPT IQAQGWP+AL G D++G+A+TGSGK Sbjct: 85 RGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGK 144 Query: 252 TLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGG 431 TLSY+LP +VH+ QP LE+GDGPI L+LAPTRELA Q+Q A ++ R +STCIYGG Sbjct: 145 TLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGG 204 Query: 432 APKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 APKGPQIRDL RGVEI IATPGRLID LE G TNLRR TYLVLDEADRMLDMGFE Sbjct: 205 APKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFE 259
>DDX5_MOUSE (Q61656) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) (DEAD box RNA helicase DEAD1) (mDEAD1) Length = 614 Score = 246 bits (629), Expect = 3e-65 Identities = 120/175 (68%), Positives = 137/175 (78%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 R PKP+ F+EANFP M IA+ F EPT IQAQGWP+AL G D++G+A+TGSGK Sbjct: 85 RGHNCPKPVLNFYEANFPANVMDVIARHNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGK 144 Query: 252 TLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGG 431 TLSY+LP +VH+ P LE+GDGPI L+LAPTRELA Q+Q A ++ R +STCIYGG Sbjct: 145 TLSYLLPAIVHINHHPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGG 204 Query: 432 APKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 APKGPQIRDL RGVEI IATPGRLID LE G TNLRR TYLVLDEADRMLDMGFE Sbjct: 205 APKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFE 259
>RM62_DROME (P19109) ATP-dependent RNA helicase p62 (EC 3.6.1.-)| Length = 719 Score = 240 bits (613), Expect = 2e-63 Identities = 116/173 (67%), Positives = 138/173 (79%) Frame = +3 Query: 78 GXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTL 257 G VP PI+ F E + PDY M+ I + G+ PT IQAQGWP+A+ G + +GIA+TGSGKTL Sbjct: 274 GQVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTL 333 Query: 258 SYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAP 437 YILP +VH+ Q L++GDGPI L+LAPTRELA QIQ AT+FGS S R+TC++GGAP Sbjct: 334 GYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAP 393 Query: 438 KGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 KG Q+RDL+RG EIVIATPGRLID L AG TNL+R TYLVLDEADRMLDMGFE Sbjct: 394 KGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFE 446
>DB10_NICSY (P46942) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-)| Length = 607 Score = 213 bits (541), Expect = 4e-55 Identities = 103/173 (59%), Positives = 130/173 (75%) Frame = +3 Query: 78 GXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTL 257 G VP P+ F FP ++ + ++GF PTPIQAQ WP+AL+GRD++ IA+TGSGKTL Sbjct: 138 GDVPAPLTSFEATGFPSEIVREMHQAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTL 197 Query: 258 SYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAP 437 Y++P +H+ Q R GP +L+L+PTRELA QIQAEA KFG SR TC+YGGAP Sbjct: 198 GYLMPAFIHL-QQRRKNPQLGPTILVLSPTRELATQIQAEAVKFGKSSRISCTCLYGGAP 256 Query: 438 KGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 KGPQ+R+L RGV+IV+ATPGRL D+LE +L +V+YLVLDEADRMLDMGFE Sbjct: 257 KGPQLRELSRGVDIVVATPGRLNDILEMRRVSLGQVSYLVLDEADRMLDMGFE 309
>HE64_TRYBB (Q26696) Putative DEAD-box RNA helicase HEL64 (EC 3.6.1.-)| Length = 568 Score = 192 bits (488), Expect = 6e-49 Identities = 93/158 (58%), Positives = 115/158 (72%) Frame = +3 Query: 123 PDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPR 302 P Y ++ + F PTP+QAQ WP+ L GRD++G+A+TGSGKTL +++P L H+ Q Sbjct: 110 PPYLLKKLTAQNFTAPTPVQAQSWPVLLSGRDLVGVAKTGSGKTLGFMVPALAHIAVQEP 169 Query: 303 LEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIV 482 L GDGP+V++LAPTRELA QI+ E TK C+YGGAPKGPQ+ LRRGV I+ Sbjct: 170 LRSGDGPMVVVLAPTRELAQQIE-EETKKVIPGDVYCGCVYGGAPKGPQLGLLRRGVHIL 228 Query: 483 IATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 +ATPGRLID L+ NL RVTYLVLDEADRMLDMGFE Sbjct: 229 VATPGRLIDFLDIKRINLHRVTYLVLDEADRMLDMGFE 266
>DDX43_HUMAN (Q9NXZ2) Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)| (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen) Length = 648 Score = 182 bits (462), Expect = 6e-46 Identities = 91/179 (50%), Positives = 129/179 (72%), Gaps = 3/179 (1%) Frame = +3 Query: 69 GRAGXVPKPIRFFHEAN--FPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 242 G +P P F +A +P+ M+ I K+GF +PTPIQ+Q WP+ L+G D+IG+A+TG Sbjct: 231 GEKRPIPNPTCTFDDAFQCYPEV-MENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTG 289 Query: 243 SGKTLSYILPGLVHVGAQPRLE-QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTC 419 +GKTL Y++PG +H+ QP L+ Q + P +L+L PTRELA+Q++ E K+ SY RS C Sbjct: 290 TGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKY-SYKGLRSVC 348 Query: 420 IYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 +YGG + QI +L++GV+I+IATPGRL D+ + NL+ +TYLVLDEAD+MLDMGFE Sbjct: 349 VYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFE 407
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 181 bits (458), Expect = 2e-45 Identities = 90/173 (52%), Positives = 118/173 (68%), Gaps = 3/173 (1%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 PKPI+ + + + ++ K G+ +PTPIQ Q P + GRD+IGIA+TGSGKT++++ Sbjct: 368 PKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFL 427 Query: 267 LPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGP 446 LP H+ Q LE+G+GPI +I+ PTRELA+QI E KF R C+YGG Sbjct: 428 LPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISE 487 Query: 447 QIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 QI +L+RG EI++ TPGR+IDML A TNLRRVTY+VLDEADRM DMGFE Sbjct: 488 QIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE 540
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 181 bits (458), Expect = 2e-45 Identities = 90/173 (52%), Positives = 118/173 (68%), Gaps = 3/173 (1%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 PKPI+ + + + ++ K G+ +PTPIQ Q P + GRD+IGIA+TGSGKT++++ Sbjct: 368 PKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFL 427 Query: 267 LPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGP 446 LP H+ Q LE+G+GPI +I+ PTRELA+QI E KF R C+YGG Sbjct: 428 LPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISE 487 Query: 447 QIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 QI +L+RG EI++ TPGR+IDML A TNLRRVTY+VLDEADRM DMGFE Sbjct: 488 QIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE 540
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 181 bits (458), Expect = 2e-45 Identities = 90/173 (52%), Positives = 118/173 (68%), Gaps = 3/173 (1%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 PKPI+ + + + ++ K G+ +PTPIQ Q P + GRD+IGIA+TGSGKT++++ Sbjct: 368 PKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFL 427 Query: 267 LPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGP 446 LP H+ Q LE+G+GPI +I+ PTRELA+QI E KF R C+YGG Sbjct: 428 LPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISE 487 Query: 447 QIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 QI +L+RG EI++ TPGR+IDML A TNLRRVTY+VLDEADRM DMGFE Sbjct: 488 QIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE 540
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (PRP5 homolog) Length = 1032 Score = 181 bits (458), Expect = 2e-45 Identities = 90/173 (52%), Positives = 118/173 (68%), Gaps = 3/173 (1%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 PKPI+ + + + ++ K G+ +PTPIQ Q P + GRD+IGIA+TGSGKT++++ Sbjct: 368 PKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFL 427 Query: 267 LPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGP 446 LP H+ Q LE+G+GPI +I+ PTRELA+QI E KF R C+YGG Sbjct: 428 LPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISE 487 Query: 447 QIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 QI +L+RG EI++ TPGR+IDML A TNLRRVTY+VLDEADRM DMGFE Sbjct: 488 QIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE 540
>DDX53_HUMAN (Q86TM3) Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-)| (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein) Length = 631 Score = 179 bits (454), Expect = 5e-45 Identities = 90/179 (50%), Positives = 129/179 (72%), Gaps = 3/179 (1%) Frame = +3 Query: 69 GRAGXVPKPIRFFHEA--NFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 242 G +PKP F +A +PD +++I + G ++PTPIQ+Q WP+ L+G D+I +A+TG Sbjct: 211 GEKRLIPKPTCRFKDAFQQYPDL-LKSIIRVGILKPTPIQSQAWPIILQGIDLIVVAQTG 269 Query: 243 SGKTLSYILPGLVHVGAQP-RLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTC 419 +GKTLSY++PG +H+ +QP EQ +GP +L+L PTRELA+ ++AE +K+ SY +S C Sbjct: 270 TGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKY-SYKGLKSIC 328 Query: 420 IYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 IYGG + QI D+ +GV+I+IATPGRL D+ NLR +TYLV+DEAD+MLDM FE Sbjct: 329 IYGGRNRNGQIEDISKGVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFE 387
>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1227 Score = 179 bits (453), Expect = 7e-45 Identities = 89/174 (51%), Positives = 117/174 (67%), Gaps = 3/174 (1%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VPKP++ + + + + G+ +PTPIQ Q P + GRDVIG+A+TGSGKT+++ Sbjct: 592 VPKPVQKWAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAF 651 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 +LP H+ QP L+ DGPI LI+ PTRELAVQI + F R+ C YGGAP Sbjct: 652 LLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIR 711 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 QI +L+RG EI++ TPGR+ID+L A TNL+RVTY+VLDEADRM DMGFE Sbjct: 712 EQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFE 765
>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1156 Score = 177 bits (448), Expect = 3e-44 Identities = 88/178 (49%), Positives = 117/178 (65%), Gaps = 3/178 (1%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 R PKP+ + P C+ I + G+ PTPIQ+Q P + GRD+IG+A+TGSGK Sbjct: 467 RGRDCPKPLTKWSHCGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGK 526 Query: 252 TLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGG 431 T++++LP H+ Q +E +GP+ +I+ PTRELAVQI E F R+ C+YGG Sbjct: 527 TMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGLRAACVYGG 586 Query: 432 APKGPQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 AP QI ++++ +IV+ATPGRLID+L A TNL RVTYLVLDEADRM DMGFE Sbjct: 587 APISEQIAEMKKTADIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFE 644
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 175 bits (443), Expect = 1e-43 Identities = 92/179 (51%), Positives = 122/179 (68%), Gaps = 4/179 (2%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 + G +P PIR + +++ P + ++ I K G+ EPTPIQ Q P+ L+ RD+IG+AETGSGK Sbjct: 382 KGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGK 441 Query: 252 TLSYILPGLVHVGAQP---RLEQGD-GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTC 419 T ++++P LV + P R+E+ D GP +ILAPTRELA QI+ E KFG R+ Sbjct: 442 TAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVA 501 Query: 420 IYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 + GG + Q LR G EIVIATPGRLID+LE + L R TY+VLDEADRM+DMGFE Sbjct: 502 VIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFE 560
>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1018 Score = 173 bits (439), Expect = 3e-43 Identities = 86/173 (49%), Positives = 117/173 (67%), Gaps = 3/173 (1%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 PKPI+ + + + A+ K + +PTPIQAQ P + GRD+IGIA+TGSGKT++++ Sbjct: 336 PKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFL 395 Query: 267 LPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGP 446 LP H+ Q + + +GP+ +I+ PTRELA+QI E KF R C+YGG Sbjct: 396 LPMFRHILDQRPVGEAEGPLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISE 455 Query: 447 QIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 QI +L+RG EI++ TPGR+IDML A + TNLRRVTY+V+DEADRM DMGFE Sbjct: 456 QIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFE 508
>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1211 Score = 172 bits (437), Expect = 5e-43 Identities = 90/178 (50%), Positives = 115/178 (64%), Gaps = 3/178 (1%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 R VPKP+ + + + I K G+ PT IQ+Q P + GRDVIG+A+TGSGK Sbjct: 566 RGVDVPKPVMKWSQCGLGVQTLDVIQKLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGK 625 Query: 252 TLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGG 431 T+++++P H+ Q LE +GPI LI+ PTRELA QI + F R+ C YGG Sbjct: 626 TIAFLIPMFRHIRDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGG 685 Query: 432 APKGPQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 AP QI +L+RG EIV+ TPGR+ID+L A TNLRRVTY+VLDEADRM DMGFE Sbjct: 686 APIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFE 743
>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) Length = 820 Score = 172 bits (436), Expect = 7e-43 Identities = 91/179 (50%), Positives = 121/179 (67%), Gaps = 4/179 (2%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 + G +P PIR + +++ P + ++ I K G+ EPTPIQ Q P+ L+ RD+IG+AETGSGK Sbjct: 382 KGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGK 441 Query: 252 TLSYILPGLVHVGAQP---RLEQGD-GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTC 419 T ++++P LV + P R+E+ D GP +ILAPTRELA QI+ E KFG R+ Sbjct: 442 TAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVA 501 Query: 420 IYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 + GG + Q LR G EIVIATPGRLID+LE + R TY+VLDEADRM+DMGFE Sbjct: 502 VIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVPSRCTYVVLDEADRMIDMGFE 560
>PRP11_SCHPO (Q9P7C7) Pre-mRNA-processing ATP-dependent RNA helicase prp11 (EC| 3.6.1.-) Length = 1014 Score = 171 bits (434), Expect = 1e-42 Identities = 89/173 (51%), Positives = 112/173 (64%), Gaps = 3/173 (1%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 PKP+ + + + I G+ +PT IQAQ P GRDVIG+A+TGSGKT++++ Sbjct: 414 PKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFL 473 Query: 267 LPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGP 446 LP H+ Q L+ G+GPI +I+ PTRELAVQI E F R+ C YGGAP Sbjct: 474 LPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKD 533 Query: 447 QIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 QI DL+RG EIV+ TPGR+ID+L A TNL R TYLVLDEADRM D+GFE Sbjct: 534 QIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFE 586
>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1173 Score = 171 bits (434), Expect = 1e-42 Identities = 89/174 (51%), Positives = 114/174 (65%), Gaps = 3/174 (1%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VPKP++ + + + I K GF T IQAQ P + GRDVIG+A+TGSGKT+++ Sbjct: 536 VPKPVQKWSQCGLGIQTLDVIDKLGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAF 595 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 ++P H+ Q LE +GPI LI+ PTRELA QI + F R+ C YGGAP Sbjct: 596 LIPMFRHIKDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIK 655 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 QI +L+RG EI++ TPGR+ID+L A TNLRRVTY+VLDEADRM DMGFE Sbjct: 656 DQIAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFE 709
>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1186 Score = 171 bits (434), Expect = 1e-42 Identities = 88/178 (49%), Positives = 115/178 (64%), Gaps = 3/178 (1%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 R VP+P+ + + + I + G+ PT IQAQ P + GRDVIG+A+TGSGK Sbjct: 545 RGVEVPRPVSKWSQCGLGVQTLDVIDRLGYSAPTSIQAQAIPAIMSGRDVIGVAKTGSGK 604 Query: 252 TLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGG 431 T+++++P H+ Q LE +GP+ LI+ PTRELA QI + F R+ C YGG Sbjct: 605 TIAFLIPMFRHIKDQRPLENMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGG 664 Query: 432 APKGPQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 AP QI DL+RG EI++ TPGR+ID+L A TNLRRVTY+VLDEADRM DMGFE Sbjct: 665 APIKDQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFE 722
>PRP5_DEBHA (Q6BML1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 913 Score = 166 bits (421), Expect = 4e-41 Identities = 89/181 (49%), Positives = 116/181 (64%), Gaps = 4/181 (2%) Frame = +3 Query: 66 RGRAGXVPKPIRFFHEANFPDYCMQAI-AKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 242 R R +PI + + P M I + + P+ IQAQ P + GRD+IG+A+TG Sbjct: 305 RVRGVNCTRPIIRWSQLGLPSTIMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTG 364 Query: 243 SGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCI 422 SGKTLS++LP L H+ QP L +GDGPI LI+ PTRELA+QI E F S C Sbjct: 365 SGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKELNHFTKKLNISSCCC 424 Query: 423 YGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGF 593 +GG+ QI +L++G +I++ TPGR+ID+L A TNL+RVTYLVLDEADRM DMGF Sbjct: 425 FGGSSIESQIAELKKGAQIIVGTPGRIIDLLAANSGRVTNLQRVTYLVLDEADRMFDMGF 484 Query: 594 E 596 E Sbjct: 485 E 485
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 165 bits (417), Expect = 1e-40 Identities = 86/174 (49%), Positives = 111/174 (63%), Gaps = 3/174 (1%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 +PKP++ + + + I GF +PTPIQ Q P+ + GRDVIG+A+TGSGKT+++ Sbjct: 556 IPKPVQKWSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAF 615 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LP L HV Q + DG I LI+ PTREL QI ++ F + R YGG Sbjct: 616 ALPMLRHVKDQDPVTGDDGAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGGNAIK 675 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 QI +L+RG EI++ATPGRLID+L A TNL+R TYLVLDEADRM DMGFE Sbjct: 676 DQIAELKRGAEIIVATPGRLIDLLAANGGRVTNLKRATYLVLDEADRMFDMGFE 729
>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1072 Score = 164 bits (416), Expect = 1e-40 Identities = 84/178 (47%), Positives = 113/178 (63%), Gaps = 3/178 (1%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 R PKP+R + P C+ I G+ PT IQAQ P + GRDVIGIA+TGSGK Sbjct: 394 RGQDAPKPVRNWGAFGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGK 453 Query: 252 TLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGG 431 T++++LP L HV Q + +GPI ++++PTRELA QI E F R++C GG Sbjct: 454 TVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGG 513 Query: 432 APKGPQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 + I +++G E+VI TPGR+ID+L A + TN+RR TY+V+DEADRM DMGFE Sbjct: 514 SSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEADRMFDMGFE 571
>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 803 Score = 161 bits (407), Expect = 2e-39 Identities = 83/180 (46%), Positives = 114/180 (63%), Gaps = 5/180 (2%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 + G VP P+R + E+ P M+ + K G+ EPTPIQ P+A++ RD+IG+A TGSGK Sbjct: 358 KGGSVPNPMRSWDESGLPKRLMELVNKVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGK 417 Query: 252 TLSYILPGLVHVGAQPRLEQ-----GDGPIVLILAPTRELAVQIQAEATKFGSYSRTRST 416 T S++LP LV++ PR+++ DGP ++LAPTRELA QI+ EA KF Sbjct: 418 TASFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGFNVV 477 Query: 417 CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 I GG Q LR G EI+IATPGRL+D +E L + Y+++DEADRM+D+GFE Sbjct: 478 SIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFE 537
>PRP28_ASPFU (Q4WPE9) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 796 Score = 159 bits (402), Expect = 6e-39 Identities = 82/180 (45%), Positives = 114/180 (63%), Gaps = 5/180 (2%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 + G VP P+R + E+ P ++ + + G+ EPTPIQ P+AL+ RD+IG+A TGSGK Sbjct: 355 KGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGK 414 Query: 252 TLSYILPGLVHVGAQPRLEQ-----GDGPIVLILAPTRELAVQIQAEATKFGSYSRTRST 416 T S++LP LV++ PR+++ DGP ++LAPTRELA QI+ EA KF Sbjct: 415 TASFLLPLLVYISELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEARKFTQPLGFNVV 474 Query: 417 CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 I GG Q LR G EI+IATPGRL+D +E L + Y+++DEADRM+D+GFE Sbjct: 475 SIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFE 534
>PRP5_CANAL (Q5ADL0) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 884 Score = 155 bits (392), Expect = 8e-38 Identities = 88/176 (50%), Positives = 113/176 (64%), Gaps = 5/176 (2%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIA-KSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLS 260 VP+PI + P I K F +P+ IQ+Q P L GRDVIGIA+TGSGKTLS Sbjct: 288 VPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLS 347 Query: 261 YILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRT-RSTCIYGGAP 437 Y+LP L H+ Q + GPI LIL+PTRELA+QI+ E F + R C YGG+ Sbjct: 348 YVLPMLRHIQDQQFSKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSS 407 Query: 438 KGPQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFE 596 QI +L++GVEI++ TPGR+ID+L A NL+R T++VLDEADRM D+GFE Sbjct: 408 IENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLGFE 463
>PRP28_GIBZE (Q4I7F9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 721 Score = 154 bits (390), Expect = 1e-37 Identities = 80/178 (44%), Positives = 113/178 (63%), Gaps = 3/178 (1%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 + G +P P+R + E+N P + + G+ +P+PIQ P+AL+ RD+IG+A TGSGK Sbjct: 279 KGGMIPNPMRSWQESNLPQRLLNIVDDVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGK 338 Query: 252 TLSYILPGLVHVGAQPRLEQ---GDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCI 422 T +++LP LV++ P L++ DGP LI+APTREL QI+ EA KF R I Sbjct: 339 TAAFLLPLLVYISDLPPLDEINKHDGPYALIMAPTRELVQQIETEARKFAGPLGFRVVSI 398 Query: 423 YGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GG Q +LR G EIV+ATPGRL+D +E L + Y+++DEADRM+D+GFE Sbjct: 399 VGGHQIEEQAYNLRDGAEIVVATPGRLLDCIERRLLVLSQCCYVIMDEADRMIDLGFE 456
>PRP5_ASHGO (Q754U8) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 816 Score = 152 bits (383), Expect = 9e-37 Identities = 91/182 (50%), Positives = 117/182 (64%), Gaps = 7/182 (3%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKS-GFVEPTPIQAQGWPMALKGRDVIGIAETGSG 248 R P+PI + + M + + F PTPIQAQ P + GRDVIGI++TGSG Sbjct: 227 RGRDCPRPILKWSQLGLNSGIMNLLTRELEFTVPTPIQAQAIPAIMSGRDVIGISKTGSG 286 Query: 249 KTLSYILPGLVHVGAQPRLEQGD--GPIVLILAPTRELAVQIQAEATKFGSYSRT-RSTC 419 KT+S+ILP L + AQ L GD GP+ LIL+PTRELA+QI E TKF S + RS C Sbjct: 287 KTVSFILPLLRQIKAQRPL-GGDETGPLGLILSPTRELALQIHEEVTKFTSGDPSIRSLC 345 Query: 420 IYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL---RRVTYLVLDEADRMLDMG 590 GG+ QI D++RGVEIVIATPGR ID+L NL +R+ ++V+DEADR+ D+G Sbjct: 346 CTGGSELKRQINDIKRGVEIVIATPGRFIDLLSLNSGNLINPKRIVFVVMDEADRLFDLG 405 Query: 591 FE 596 FE Sbjct: 406 FE 407
>AN3_XENLA (P24346) Putative ATP-dependent RNA helicase an3 (EC 3.6.1.-)| Length = 697 Score = 152 bits (383), Expect = 9e-37 Identities = 84/183 (45%), Positives = 109/183 (59%), Gaps = 13/183 (7%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P I FH+ + M I + + PTP+Q P+ ++ RD++ A+TGSGKT +++ Sbjct: 217 PPHIESFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIEKRDLMACAQTGSGKTAAFL 276 Query: 267 LPGLVHV------GAQPRLEQGDG-------PIVLILAPTRELAVQIQAEATKFGSYSRT 407 LP L + A L++ P+ L+LAPTRELAVQI EA KF SR Sbjct: 277 LPILSQIYADGPGDAMKHLQENGRYGRRKQFPLSLVLAPTRELAVQIYEEARKFAYRSRV 336 Query: 408 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDM 587 R +YGGA G QIRDL RG +++ATPGRL+DM+E G L YLVLDEADRMLDM Sbjct: 337 RPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDM 396 Query: 588 GFE 596 GFE Sbjct: 397 GFE 399
>PRP28_NEUCR (Q7SEL0) Pre-mRNA splicing ATP-dependent RNA helicase prp-28 (EC| 3.6.1.-) Length = 728 Score = 151 bits (382), Expect = 1e-36 Identities = 80/178 (44%), Positives = 108/178 (60%), Gaps = 3/178 (1%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 + G +P P+R + E+ P + + G+ EPTPIQ P+AL+ RD+IG+A TGSGK Sbjct: 284 KGGAIPNPMRSWEESTLPRRLLDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGK 343 Query: 252 TLSYILPGLVHVGAQPRLEQ---GDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCI 422 T +++LP LV++ P L + DGP LILAPTREL QI++EA KF + I Sbjct: 344 TAAFLLPLLVYISELPPLTEYNKNDGPYALILAPTRELVQQIESEAKKFATPLGFTVVSI 403 Query: 423 YGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GG Q LR G EI++ATPGRL+D LE + Y ++DEADRM+D GFE Sbjct: 404 VGGHSLEEQAFALRNGAEIIVATPGRLVDCLERRLLVFSQCCYTIMDEADRMIDQGFE 461
>DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-) (DEAD box| protein 1) (Helicase CA1) Length = 617 Score = 151 bits (381), Expect = 2e-36 Identities = 84/181 (46%), Positives = 109/181 (60%), Gaps = 10/181 (5%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+PI F + M+ I + F +PTP+Q P+ KGRD++ A+TGSGKT + Sbjct: 149 VPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGF 208 Query: 264 ILP---GLVHVGAQPRLEQGDG-------PIVLILAPTRELAVQIQAEATKFGSYSRTRS 413 + P L G P E+ P L+LAPTRELA QI EA KF S R Sbjct: 209 LFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFTYRSWVRP 268 Query: 414 TCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 +YGGAP G Q+R++ RG ++++ATPGRL D+LE G +L + YLVLDEADRMLDMGF Sbjct: 269 CVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGF 328 Query: 594 E 596 E Sbjct: 329 E 329
>PRP5_YEAST (P21372) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 849 Score = 149 bits (377), Expect = 5e-36 Identities = 88/176 (50%), Positives = 112/176 (63%), Gaps = 6/176 (3%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIA-KSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 PKP+ + + M I K F TPIQ+Q P + GRDVIGI++TGSGKT+SY Sbjct: 251 PKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISY 310 Query: 264 ILPGLVHVGAQ-PRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRT-RSTCIYGGAP 437 +LP L V AQ P + GP+ LILAPTRELA+QI E TKF + RS C GG+ Sbjct: 311 LLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSE 370 Query: 438 KGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL---RRVTYLVLDEADRMLDMGFE 596 QI DL+RG EIV+ATPGR ID+L L +R+T++V+DEADR+ D+GFE Sbjct: 371 MKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFE 426
>PRP5_KLULA (Q6CKI1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 812 Score = 149 bits (375), Expect = 8e-36 Identities = 84/174 (48%), Positives = 114/174 (65%), Gaps = 5/174 (2%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKS-GFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 PKP+ + + M I+ FV TPIQ Q P + GRDVIGI++TGSGKT+++ Sbjct: 241 PKPVTKWSQLGLSSEIMDLISNELQFVTLTPIQCQAIPAIMSGRDVIGISKTGSGKTVAF 300 Query: 264 ILPGLVHVGAQPRLEQGD-GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPK 440 +LP + + AQP L + GPI LIL PTRELAVQIQ EA KF S S C GG+ Sbjct: 301 LLPLVRQIKAQPPLAPDETGPIGLILTPTRELAVQIQEEALKFCKGSGISSICCVGGSEL 360 Query: 441 GPQIRDLRRGVEIVIATPGRLIDM--LEAGH-TNLRRVTYLVLDEADRMLDMGF 593 QI +L+RGV+I++ATPGR ID+ L +GH + R++++V+DEADR+ D+GF Sbjct: 361 KQQINELKRGVDIIVATPGRFIDLMTLNSGHLLSPTRISFVVMDEADRLFDLGF 414
>PL10_MOUSE (P16381) Putative ATP-dependent RNA helicase Pl10 (EC 3.6.1.-)| Length = 660 Score = 148 bits (374), Expect = 1e-35 Identities = 85/183 (46%), Positives = 108/183 (59%), Gaps = 13/183 (7%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P I F + + M I + + PTP+Q P+ + RD++ A+TGSGKT +++ Sbjct: 175 PPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 234 Query: 267 LPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELAVQIQAEATKFGSYSRT 407 LP L + G R + +G PI L+LAPTRELAVQI EA KF SR Sbjct: 235 LPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 294 Query: 408 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDM 587 R +YGGA G QIRDL RG +++ATPGRL+DM+E G L YLVLDEADRMLDM Sbjct: 295 RPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDM 354 Query: 588 GFE 596 GFE Sbjct: 355 GFE 357
>DDX3X_MOUSE (Q62167) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (DEAD box RNA helicase DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1Pas1-related sequence 2) Length = 661 Score = 148 bits (374), Expect = 1e-35 Identities = 85/183 (46%), Positives = 108/183 (59%), Gaps = 13/183 (7%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P I F + + M I + + PTP+Q P+ + RD++ A+TGSGKT +++ Sbjct: 175 PPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 234 Query: 267 LPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELAVQIQAEATKFGSYSRT 407 LP L + G R + +G PI L+LAPTRELAVQI EA KF SR Sbjct: 235 LPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 294 Query: 408 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDM 587 R +YGGA G QIRDL RG +++ATPGRL+DM+E G L YLVLDEADRMLDM Sbjct: 295 RPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDM 354 Query: 588 GFE 596 GFE Sbjct: 355 GFE 357
>DDX3X_HUMAN (O00571) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (Helicase-like protein 2) (HLP2) (DEAD box, X isoform) Length = 661 Score = 148 bits (374), Expect = 1e-35 Identities = 85/183 (46%), Positives = 108/183 (59%), Gaps = 13/183 (7%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P I F + + M I + + PTP+Q P+ + RD++ A+TGSGKT +++ Sbjct: 175 PPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 234 Query: 267 LPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELAVQIQAEATKFGSYSRT 407 LP L + G R + +G PI L+LAPTRELAVQI EA KF SR Sbjct: 235 LPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 294 Query: 408 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDM 587 R +YGGA G QIRDL RG +++ATPGRL+DM+E G L YLVLDEADRMLDM Sbjct: 295 RPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDM 354 Query: 588 GFE 596 GFE Sbjct: 355 GFE 357
>PRP28_CRYNE (Q5KNF8) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 738 Score = 147 bits (372), Expect = 2e-35 Identities = 77/178 (43%), Positives = 111/178 (62%), Gaps = 3/178 (1%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 R G +P P+R + E+ P + I + G+ EP+PIQ Q P+ ++ RD+IG+A+TGSGK Sbjct: 306 RGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGK 365 Query: 252 TLSYILPGLVHVGAQPRLEQGD---GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCI 422 T ++++P L ++G P L + GP LI+APTRELA QI+ E +F + I Sbjct: 366 TAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSI 425 Query: 423 YGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GG Q LR G EI+IATPGRL DM++ + + Y+V+DEADRM+D+GFE Sbjct: 426 VGGRSVEEQQFALRDGAEIIIATPGRLKDMVDKSILVMSQCRYVVMDEADRMVDLGFE 483
>DBP3_KLULA (Q6CT46) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 504 Score = 146 bits (369), Expect = 4e-35 Identities = 80/168 (47%), Positives = 106/168 (63%) Frame = +3 Query: 93 PIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILP 272 P F + +F D + I+K F +PTPIQA WP L G+DVIGIAETGSGKT ++ +P Sbjct: 92 PYLDFSQVSFIDQIQKEISK--FPKPTPIQAVSWPYLLAGKDVIGIAETGSGKTFAFGVP 149 Query: 273 GLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQI 452 + ++ ++ VL+++PTRELA QI RS C+YGG PK Q Sbjct: 150 AINNIVTSG--DKSSSVKVLVISPTRELASQIYDNLIVLTDACGLRSCCVYGGVPKDQQR 207 Query: 453 RDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 DLRR ++V+ATPGRL+D++E G +L V YLVLDEADRML+ GFE Sbjct: 208 EDLRRS-QVVVATPGRLLDLIEEGSVDLSHVNYLVLDEADRMLEKGFE 254
>PRP28_YARLI (Q6C024) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 575 Score = 146 bits (369), Expect = 4e-35 Identities = 78/177 (44%), Positives = 115/177 (64%), Gaps = 4/177 (2%) Frame = +3 Query: 78 GXVPKPIRFFHEAN-FPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKT 254 G +P P+R ++E P I++ G+ EPTPIQ P+AL RDVIG+AETGSGKT Sbjct: 155 GNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGVAETGSGKT 214 Query: 255 LSYILPGLVHVGAQPRLEQG---DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIY 425 S+++P + ++ P+L++ +GP LILAPTRELA+QI+ EA KF + + + Sbjct: 215 ASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAVKFCAPLGFKVVSVV 274 Query: 426 GGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GG Q ++ G E+++ATPGRL+D+++ L + Y+V+DEADRM+DMGFE Sbjct: 275 GGYSAQEQALAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMDEADRMVDMGFE 331
>DDX3Y_PONPY (Q5RF43) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 658 Score = 145 bits (367), Expect = 7e-35 Identities = 84/183 (45%), Positives = 108/183 (59%), Gaps = 13/183 (7%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P I F + + + M I + + PTP+Q P+ RD++ A+TGSGKT +++ Sbjct: 174 PPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFL 233 Query: 267 LPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELAVQIQAEATKFGSYSRT 407 LP L + G + + +G PI L+LAPTRELAVQI EA KF SR Sbjct: 234 LPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 293 Query: 408 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDM 587 R +YGGA G QIRDL RG +++ATPGRL+DM+E G L YLVLDEADRMLDM Sbjct: 294 RPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDM 353 Query: 588 GFE 596 GFE Sbjct: 354 GFE 356
>DDX3Y_HUMAN (O15523) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 145 bits (367), Expect = 7e-35 Identities = 84/183 (45%), Positives = 108/183 (59%), Gaps = 13/183 (7%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P I F + + + M I + + PTP+Q P+ RD++ A+TGSGKT +++ Sbjct: 174 PPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFL 233 Query: 267 LPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELAVQIQAEATKFGSYSRT 407 LP L + G + + +G PI L+LAPTRELAVQI EA KF SR Sbjct: 234 LPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 293 Query: 408 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDM 587 R +YGGA G QIRDL RG +++ATPGRL+DM+E G L YLVLDEADRMLDM Sbjct: 294 RPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDM 353 Query: 588 GFE 596 GFE Sbjct: 354 GFE 356
>DDX3Y_PANTR (Q6GVM6) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 145 bits (366), Expect = 9e-35 Identities = 84/183 (45%), Positives = 108/183 (59%), Gaps = 13/183 (7%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P I F + + + M I + + PTP+Q P+ RD++ A+TGSGKT +++ Sbjct: 174 PPHIENFGDIDMGEIIMGNIQLTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFL 233 Query: 267 LPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELAVQIQAEATKFGSYSRT 407 LP L + G + + +G PI L+LAPTRELAVQI EA KF SR Sbjct: 234 LPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 293 Query: 408 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDM 587 R +YGGA G QIRDL RG +++ATPGRL+DM+E G L YLVLDEADRMLDM Sbjct: 294 RPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDM 353 Query: 588 GFE 596 GFE Sbjct: 354 GFE 356
>DED1_ASPFU (Q4WP13) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 674 Score = 144 bits (364), Expect = 1e-34 Identities = 80/185 (43%), Positives = 106/185 (57%), Gaps = 14/185 (7%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+P+ F D+ + I + + PTP+Q P+ + GRD++ A+TGSGKT + Sbjct: 183 VPEPVNAFTNPPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGF 242 Query: 264 ILPGL---VHVGAQPRLEQGDG-----------PIVLILAPTRELAVQIQAEATKFGSYS 401 + P L G P Q G P LILAPTREL QI EA KF S Sbjct: 243 LFPILSQAFQTGPSPVPAQASGQFGYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRS 302 Query: 402 RTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRML 581 R +YGGA G Q+R + RG ++++ATPGRL+D++E G +L + YLVLDEADRML Sbjct: 303 WVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLVLDEADRML 362 Query: 582 DMGFE 596 DMGFE Sbjct: 363 DMGFE 367
>DED1_YEAST (P06634) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) (DEAD box| protein 1) Length = 604 Score = 144 bits (364), Expect = 1e-34 Identities = 80/181 (44%), Positives = 108/181 (59%), Gaps = 10/181 (5%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+PI F ++ I + F +PTP+Q P+ GRD++ A+TGSGKT + Sbjct: 137 VPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGF 196 Query: 264 ILPGLVH---VGAQPRLEQGDG-------PIVLILAPTRELAVQIQAEATKFGSYSRTRS 413 + P L G P+ E P +I+APTRELA QI EA KF S ++ Sbjct: 197 LFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVKA 256 Query: 414 TCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 +YGG+P G Q+R++ RG ++++ATPGRL D+LE G +L V YLVLDEADRMLDMGF Sbjct: 257 CVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGF 316 Query: 594 E 596 E Sbjct: 317 E 317
>PRP28_SCHPO (Q9Y7T7) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 662 Score = 144 bits (363), Expect = 2e-34 Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 3/174 (1%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 +P P+R + EA P ++ + K + EP+ IQ P+ L+ +D+IGIAETGSGKT ++ Sbjct: 244 LPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAAF 303 Query: 264 ILPGLVHVGAQPRLEQGD---GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGA 434 I+P ++ + P L + + GP ++LAPTRELA QIQ E KF R + GG Sbjct: 304 IIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGH 363 Query: 435 PKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 Q + +G IV+ATPGRL+D LE L + TY+V+DEADRMLDMGFE Sbjct: 364 AFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFE 417
>DDX3Y_MOUSE (Q62095) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) (DEAD-box RNA helicase DEAD2) (mDEAD2) (D1Pas1-related sequence 1) Length = 658 Score = 144 bits (362), Expect = 2e-34 Identities = 83/183 (45%), Positives = 107/183 (58%), Gaps = 13/183 (7%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P I F + + M I + + PTP+Q P+ + RD++ A+TGSGKT +++ Sbjct: 175 PPHIENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 234 Query: 267 LPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELAVQIQAEATKFGSYSRT 407 LP L + G + + +G PI L+LAPTRELAVQI EA KF SR Sbjct: 235 LPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 294 Query: 408 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDM 587 R +YGGA QIRDL RG +++ATPGRL+DM+E G L YLVLDEADRMLDM Sbjct: 295 RPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDM 354 Query: 588 GFE 596 GFE Sbjct: 355 GFE 357
>DED1_NEUCR (Q9P6U9) ATP-dependent RNA helicase ded-1 (EC 3.6.1.-)| Length = 688 Score = 143 bits (361), Expect = 3e-34 Identities = 79/183 (43%), Positives = 106/183 (57%), Gaps = 12/183 (6%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+P+ F ++ + I + + PTP+Q P+ + GRD++ A+TGSGKT + Sbjct: 189 VPEPVLTFSNPPLDNHLISNIQLARYNVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGF 248 Query: 264 ILPGL---VHVGAQPRLEQGDG---------PIVLILAPTRELAVQIQAEATKFGSYSRT 407 + P L H G P G P LILAPTREL QI EA KF S Sbjct: 249 LFPILSQSFHTGPSPIPASAAGAYGRQRKAYPTALILAPTRELVSQIYDEARKFAYRSWV 308 Query: 408 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDM 587 R +YGGA G Q+R + RG ++++ATPGRL+D++E G +L + YLVLDEADRMLDM Sbjct: 309 RPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDM 368 Query: 588 GFE 596 GFE Sbjct: 369 GFE 371
>PRP5_CANGA (Q6FML5) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 816 Score = 143 bits (360), Expect = 4e-34 Identities = 83/175 (47%), Positives = 108/175 (61%), Gaps = 5/175 (2%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKS-GFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 P+P+ + + P ++ I + TPIQ Q P + GRDVIGI++TGSGKT+SY Sbjct: 247 PRPVTKWSQLGIPYDIIRFIKDVFSYKSLTPIQTQTIPAIMSGRDVIGISKTGSGKTISY 306 Query: 264 ILPGLVHVGAQPRLEQGD-GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPK 440 +LP + HV AQ +L G+ GPI +I APTRELAVQI E K S S C GG+ Sbjct: 307 LLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQINEEVQKLISDLDISSICCTGGSDL 366 Query: 441 GPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL---RRVTYLVLDEADRMLDMGFE 596 QI L+ GVEI IATPGR ID+L NL R++++V+DEADR+ D GFE Sbjct: 367 KKQIDKLKTGVEIAIATPGRFIDLLSLNGGNLVSTLRISFVVMDEADRLFDFGFE 421
>DBP3_ASPFU (Q4WH83) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 503 Score = 142 bits (359), Expect = 6e-34 Identities = 77/149 (51%), Positives = 101/149 (67%), Gaps = 1/149 (0%) Frame = +3 Query: 153 SGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDG-PIV 329 S F PTPIQ+ WP+ GRDVIGIAETGSGKTL++ LP + + ++++ P Sbjct: 103 SSFSSPTPIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCIKKILDSGKVKRKHARPAA 162 Query: 330 LILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLID 509 +I++PTRELA+QI + +KFG+ R TCIYGG K Q R+ + IV+ATPGRL D Sbjct: 163 VIISPTRELAMQIYDQLSKFGASVDIRVTCIYGGVKKDEQ-REALKTAAIVVATPGRLKD 221 Query: 510 MLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 + + G +L +V YLVLDEADRMLD GFE Sbjct: 222 LKDDGSVDLGKVKYLVLDEADRMLDKGFE 250
>DED1_ASPOR (Q2UGK3) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 675 Score = 142 bits (358), Expect = 7e-34 Identities = 78/185 (42%), Positives = 105/185 (56%), Gaps = 14/185 (7%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+P+ F D+ + I + + PTP+Q P+ + GRD++ A+TGSGKT + Sbjct: 181 VPEPVNAFTNPPLDDHLIANITLAHYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGF 240 Query: 264 ILPGLVHV---GAQPRLEQGDG-----------PIVLILAPTRELAVQIQAEATKFGSYS 401 + P L G P G P LILAPTREL QI EA KF S Sbjct: 241 LFPILSQAFQNGPSPTPAPASGQFSYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRS 300 Query: 402 RTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRML 581 R +YGGA G Q+R + RG ++++ATPGRL+D++E G +L + YL+LDEADRML Sbjct: 301 WVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLILDEADRML 360 Query: 582 DMGFE 596 DMGFE Sbjct: 361 DMGFE 365
>PRP28_DEBHA (Q6BLU9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 580 Score = 142 bits (358), Expect = 7e-34 Identities = 79/185 (42%), Positives = 108/185 (58%), Gaps = 10/185 (5%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKS-GFVEPTPIQAQGWPMALKGRDVIGIAETGSG 248 + G + P+R + E+ P + + K+ G+ PTPIQ P+AL GRD++GIAETGSG Sbjct: 145 KGGDIENPLRCWAESKLPAKLLNILIKNLGYDSPTPIQRASIPLALNGRDIVGIAETGSG 204 Query: 249 KTLSYILPGLVHVGA---------QPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYS 401 KTL+++LP ++ + + + P+ LILAPTRELA+QI EA FG Sbjct: 205 KTLAFLLPLFSYILSVDSNYLLYEHQQESNFNKPLGLILAPTRELALQITKEAKLFGDKL 264 Query: 402 RTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRML 581 I GG + +R GV IV+ATPGRLID LE G NL + +DEAD+M+ Sbjct: 265 NLNVVTIIGGHQYEETVHSVRNGVHIVVATPGRLIDSLERGIINLSNCYFFTMDEADKMI 324 Query: 582 DMGFE 596 DMGFE Sbjct: 325 DMGFE 329
>DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 630 Score = 141 bits (356), Expect = 1e-33 Identities = 79/181 (43%), Positives = 107/181 (59%), Gaps = 10/181 (5%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+PI F ++ + S F +PTP+Q P+ GRD++ A+TGSGKT + Sbjct: 151 VPEPITAFTAPPLDPLLVENVKLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGF 210 Query: 264 ILPGLV--HVGAQPRLEQGDG--------PIVLILAPTRELAVQIQAEATKFGSYSRTRS 413 + P L ++ + + G P L++APTREL QI EA KF S R Sbjct: 211 LFPVLSESYMNGPAEVPETAGAFSSHKVYPTALVMAPTRELVSQIFDEAKKFAYRSWVRP 270 Query: 414 TCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 + +YGGA G QIR+L RG ++++ATPGRL D+LE G +L + YLVLDEADRMLDMGF Sbjct: 271 SVVYGGADIGGQIRNLERGCDLLVATPGRLKDLLERGRVSLASIKYLVLDEADRMLDMGF 330 Query: 594 E 596 E Sbjct: 331 E 331
>DED1_CANAL (Q5A4E2) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 141 bits (356), Expect = 1e-33 Identities = 78/181 (43%), Positives = 107/181 (59%), Gaps = 10/181 (5%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+PI F + ++ I S F +PTP+Q P+ GRD++ A+TGSGKT + Sbjct: 181 VPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGF 240 Query: 264 ILPGLVHV---GAQPRLEQGDG-------PIVLILAPTRELAVQIQAEATKFGSYSRTRS 413 + P L G P E P +L++APTREL QI E+ KF S R+ Sbjct: 241 LFPVLSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEESKKFSYRSWVRA 300 Query: 414 TCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 +YGGA G Q+R++ RG ++++ATPGRL D+L+ G +L + YLVLDEADRMLDMGF Sbjct: 301 CVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMGF 360 Query: 594 E 596 E Sbjct: 361 E 361
>DBP3_YARLI (Q6C9P3) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 532 Score = 140 bits (354), Expect = 2e-33 Identities = 73/146 (50%), Positives = 96/146 (65%) Frame = +3 Query: 159 FVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLIL 338 F PTPIQA WP L G+D++G+AETGSGKT ++ +P L HV + G G VL++ Sbjct: 144 FPRPTPIQAVSWPYLLAGKDMVGVAETGSGKTFTFAVPALEHVLS---TSGGKGVRVLVV 200 Query: 339 APTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE 518 +PTRELA+QI + + C+YGG PK Q DL+R VIATPGRL D+++ Sbjct: 201 SPTRELAMQIYDNIKELCDVVGLHAVCVYGGVPKEQQRSDLKR-ASFVIATPGRLCDLID 259 Query: 519 AGHTNLRRVTYLVLDEADRMLDMGFE 596 G +L +V+YLVLDEADRML+ GFE Sbjct: 260 EGSCDLSKVSYLVLDEADRMLEKGFE 285
>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 637 Score = 140 bits (353), Expect = 3e-33 Identities = 79/185 (42%), Positives = 106/185 (57%), Gaps = 14/185 (7%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+P+ F ++ + + + PTP+Q P+ GRD++ A+TGSGKT + Sbjct: 155 VPEPVTEFTNPPINPVLLENVKYARYATPTPVQKYSIPIVADGRDLMACAQTGSGKTGGF 214 Query: 264 ILPGL----VHVGAQPRLEQGDG----------PIVLILAPTRELAVQIQAEATKFGSYS 401 + P L + + P +EQ G P L+LAPTREL QI EA KF S Sbjct: 215 LFPILSALFTYGPSTPPVEQDTGYGYRRTKKVYPTALVLAPTRELVSQIHEEARKFAYRS 274 Query: 402 RTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRML 581 R +YGGA G Q+R L RG +++ ATPGRL+D++E G +L V YLVLDEADRML Sbjct: 275 WVRPAVVYGGADIGSQMRALDRGCDLLSATPGRLVDLIERGKISLANVKYLVLDEADRML 334 Query: 582 DMGFE 596 DMGFE Sbjct: 335 DMGFE 339
>DED1_ASHGO (Q75B50) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 623 Score = 140 bits (352), Expect = 4e-33 Identities = 80/180 (44%), Positives = 104/180 (57%), Gaps = 9/180 (5%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP PI F + ++ I + F +PTP+Q P+ KGRD++ A+TGSGKT + Sbjct: 141 VPDPITEFTSPPLDELLLENIKLARFTKPTPVQKYSVPIVAKGRDLMACAQTGSGKTGGF 200 Query: 264 ILPGLVHVGAQPRLEQGDG---------PIVLILAPTRELAVQIQAEATKFGSYSRTRST 416 + P L + D P ++LAPTRELA QI EA KF S + Sbjct: 201 LFPVLSQSFSNGPASTPDESGYYMRKAYPTAVVLAPTRELATQIFDEAKKFTYRSWVKPC 260 Query: 417 CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 +YGGA QIR+L RG ++++ATPGRL D+LE G +L V YLVLDEADRMLDMGFE Sbjct: 261 VVYGGADIRQQIRELERGCDLIVATPGRLNDLLERGKISLCSVKYLVLDEADRMLDMGFE 320
>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 974 Score = 139 bits (351), Expect = 5e-33 Identities = 78/186 (41%), Positives = 108/186 (58%), Gaps = 11/186 (5%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 251 R PKPI + + P M + + +PT IQAQ P + GRDVI +A+TGSGK Sbjct: 369 RGKDCPKPISKWTQLGLPGPTMGVLNDLRYDKPTSIQAQAIPAVMSGRDVISVAKTGSGK 428 Query: 252 TLSYILPGLVHVGAQPRLEQ--------GDGPIVLILAPTRELAVQIQAEATKFGSYSRT 407 TL+++LP L H+ + +E P+ +I+ PTREL VQI + F + Sbjct: 429 TLAFLLPMLRHIKHRVGVETHTTTLSGASSHPLGVIITPTRELCVQIYRDLRPFLAALEL 488 Query: 408 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRM 578 + C YGG+P QI L++G I++ TPGR+ID+L A +L RVT+LV+DEADRM Sbjct: 489 TAVCAYGGSPIKDQIAALKKGTHIIVCTPGRMIDLLAANQGRVLSLSRVTFLVIDEADRM 548 Query: 579 LDMGFE 596 DMGFE Sbjct: 549 FDMGFE 554
>DBP3_USTMA (Q4PDT1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 585 Score = 139 bits (351), Expect = 5e-33 Identities = 76/162 (46%), Positives = 100/162 (61%), Gaps = 9/162 (5%) Frame = +3 Query: 138 QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL---- 305 + + GF PTPIQA WP+ L+ +DV+GIAETGSGKT ++ LP L H+ + ++ Sbjct: 172 KTLDSQGFSTPTPIQACCWPVLLQNKDVVGIAETGSGKTFAFGLPALQHLVTKHKVLDSG 231 Query: 306 ---EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRG-- 470 +G VL++APTRELA+Q + K G C+YGG K Q+R L + Sbjct: 232 KKKAKGAQVNVLVIAPTRELAIQTEENMAKLGKSMGIGMICLYGGVSKQEQVRLLNQSPP 291 Query: 471 VEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 V IV+ TPGR++DM G +L VTYLVLDEADRMLD GFE Sbjct: 292 VRIVVGTPGRVLDMARDGSLDLSGVTYLVLDEADRMLDKGFE 333
>DED1_YARLI (Q6CB69) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 618 Score = 139 bits (349), Expect = 8e-33 Identities = 75/182 (41%), Positives = 106/182 (58%), Gaps = 11/182 (6%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+PI F ++ + I + + +PTP+Q P+ GRD++ A+TGSGKT + Sbjct: 155 VPEPINAFTSPPLEEHLLTNIKLARYNKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGF 214 Query: 264 ILPGLVHV---GAQP--------RLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTR 410 + P L G P + + P L+LAPTREL QI EA KF S R Sbjct: 215 LFPVLSQSFFHGPSPTPQPTGPRHMHKKAYPTALVLAPTRELVSQIYDEAKKFAYRSWVR 274 Query: 411 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMG 590 +YGGA G Q+R++ RG ++++A PGRL+D+++ G +L + YLVLDEADRMLDMG Sbjct: 275 PCVVYGGADIGEQMRNIERGCDLLVAAPGRLVDLIDRGKVSLENIKYLVLDEADRMLDMG 334 Query: 591 FE 596 FE Sbjct: 335 FE 336
>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)| Length = 454 Score = 138 bits (348), Expect = 1e-32 Identities = 72/154 (46%), Positives = 98/154 (63%), Gaps = 1/154 (0%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++A+A+ G+ EPTPIQ Q P L+GRD++ A+TG+GKT + LP L H+ + +G Sbjct: 13 LRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKG 72 Query: 315 DGPI-VLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIAT 491 P+ LIL PTRELA QI + Y RS ++GG PQ+ LR GV++++AT Sbjct: 73 RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVAT 132 Query: 492 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 PGRL+D+ L +V LVLDEADRMLDMGF Sbjct: 133 PGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGF 166
>DDX4_RAT (Q64060) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (rVLG) Length = 713 Score = 138 bits (347), Expect = 1e-32 Identities = 78/173 (45%), Positives = 104/173 (60%), Gaps = 4/173 (2%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P I F EAN IAK+G+ + TP+Q P+ L GRD++ A+TGSGKT +++ Sbjct: 269 PPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFL 328 Query: 267 LPGLVHVGAQ----PRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGA 434 LP L H+ R ++ P +I+APTREL QI EA KF + R+ IYGG Sbjct: 329 LPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGT 388 Query: 435 PKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 G IR + +G I+ ATPGRL+D++ L++V YLVLDEADRMLDMGF Sbjct: 389 QFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGF 441
>DDX4_HUMAN (Q9NQI0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) Length = 724 Score = 138 bits (347), Expect = 1e-32 Identities = 77/173 (44%), Positives = 104/173 (60%), Gaps = 4/173 (2%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P I F EAN IAK+G+ + TP+Q P+ L GRD++ A+TGSGKT +++ Sbjct: 284 PPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFL 343 Query: 267 LPGLVHVG----AQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGA 434 LP L H+ R ++ P +I+APTREL QI EA KF + R+ IYGG Sbjct: 344 LPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGT 403 Query: 435 PKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 G IR + +G I+ ATPGRL+D++ L+++ YLVLDEADRMLDMGF Sbjct: 404 QLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGF 456
>DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 617 Score = 138 bits (347), Expect = 1e-32 Identities = 79/181 (43%), Positives = 106/181 (58%), Gaps = 10/181 (5%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+ I F ++ I + F +PTP+Q P+ KGRD++ A+TGSGKT + Sbjct: 140 VPEAITEFTSPPLDSLLLENIKLARFTKPTPVQKYSVPIVSKGRDLMACAQTGSGKTGGF 199 Query: 264 ILPGLVHVGAQPRLEQG--DG--------PIVLILAPTRELAVQIQAEATKFGSYSRTRS 413 + P L E+ DG P +++APTRELA QI EA KF S + Sbjct: 200 LFPVLSESFLTGPAEKAANDGYSYQRKAFPTAVVMAPTRELATQIFDEAKKFCYRSWVKP 259 Query: 414 TCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 +YGGAP G Q+R++ G ++++ATPGRL D+LE G +L V YLVLDEADRMLDMGF Sbjct: 260 CVVYGGAPIGNQMREMDHGCDLLVATPGRLNDLLERGKVSLSNVKYLVLDEADRMLDMGF 319 Query: 594 E 596 E Sbjct: 320 E 320
>DDX4_PIG (Q6GWX0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (VASA-like protein) Length = 722 Score = 138 bits (347), Expect = 1e-32 Identities = 77/173 (44%), Positives = 104/173 (60%), Gaps = 4/173 (2%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P I F EAN IAK+G+ + TP+Q P+ L GRD++ A+TGSGKT +++ Sbjct: 282 PPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFL 341 Query: 267 LPGLVHVG----AQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGA 434 LP L H+ R ++ P +I+APTREL QI EA KF + R+ IYGG Sbjct: 342 LPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGT 401 Query: 435 PKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 G IR + +G I+ ATPGRL+D++ L+++ YLVLDEADRMLDMGF Sbjct: 402 QLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGF 454
>DDX4_MOUSE (Q61496) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (Mvh) Length = 702 Score = 137 bits (346), Expect = 2e-32 Identities = 77/173 (44%), Positives = 104/173 (60%), Gaps = 4/173 (2%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P I F EAN IAK+G+ + TP+Q P+ L GRD++ A+TGSGKT +++ Sbjct: 257 PPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFL 316 Query: 267 LPGLVHVGAQ----PRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGA 434 LP L H+ R ++ P +I+APTREL QI EA KF + R+ IYGG Sbjct: 317 LPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGT 376 Query: 435 PKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 G +R + +G I+ ATPGRL+D++ L++V YLVLDEADRMLDMGF Sbjct: 377 QFGHSVRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGF 429
>ABS_DROME (Q9V3C0) ATP-dependent RNA helicase abstrakt (EC 3.6.1.-) (DEAD box| protein abstrakt) Length = 619 Score = 137 bits (346), Expect = 2e-32 Identities = 79/177 (44%), Positives = 100/177 (56%), Gaps = 9/177 (5%) Frame = +3 Query: 93 PIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILP 272 PIR F E FP + +A G PTPIQ QG P L GRD+IGIA TGSGKTL ++LP Sbjct: 175 PIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLP 234 Query: 273 GLVHVGAQP---RLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRT------RSTCIY 425 ++ Q E+ +GP LI+ P+RELA Q + + + RS Sbjct: 235 VIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAM 294 Query: 426 GGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GG P + + RGV IV+ATPGRL+DML+ L YL +DEADRM+DMGFE Sbjct: 295 GGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFE 351
>DBP3_EMENI (Q5AWA6) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 137 bits (344), Expect = 3e-32 Identities = 73/147 (49%), Positives = 94/147 (63%) Frame = +3 Query: 156 GFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLI 335 GF PT IQ+ WP+ GRDVIGIAETGSGKTL++ LP L V ++ P+ ++ Sbjct: 92 GFASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQKSCRPLAVV 151 Query: 336 LAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDML 515 ++PTRELA+QI + KF + CI+GG K Q R+ + +V+ATPGRL D+ Sbjct: 152 ISPTRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQ-REALKSAAVVVATPGRLKDLQ 210 Query: 516 EAGHTNLRRVTYLVLDEADRMLDMGFE 596 G +L RV YLVLDEADRMLD GFE Sbjct: 211 NDGSLDLGRVKYLVLDEADRMLDKGFE 237
>DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 675 Score = 136 bits (343), Expect = 4e-32 Identities = 75/183 (40%), Positives = 106/183 (57%), Gaps = 12/183 (6%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+P+ F ++ + I + + PTP+Q P+ GRD++ A+TGSGKT + Sbjct: 181 VPEPVHQFTTPPLDEHLCRNIELAHYKVPTPVQKYSIPIVSGGRDLMACAQTGSGKTGGF 240 Query: 264 ILPGL------------VHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRT 407 + P L + Q ++ P LILAPTREL QI E+ KF S Sbjct: 241 LFPILSQAFINGPSAVPANAAGQFGRQRKAYPTSLILAPTRELVSQIFDESRKFAYRSWV 300 Query: 408 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDM 587 R +YGGA G Q+R + RG ++++ATPGRL+D++E G +L+ + YLVLDEADRMLDM Sbjct: 301 RPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDM 360 Query: 588 GFE 596 GFE Sbjct: 361 GFE 363
>DBP3_CRYNE (Q5KHB7) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 605 Score = 136 bits (342), Expect = 5e-32 Identities = 73/155 (47%), Positives = 101/155 (65%), Gaps = 9/155 (5%) Frame = +3 Query: 159 FVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL---EQGDGPI- 326 F +PTPIQA WP L +DV+GIAETGSGKTL++ +PG+ + P + ++G G + Sbjct: 193 FEKPTPIQACSWPALLSKKDVVGIAETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVP 252 Query: 327 ----VLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL-RRGVEIVIAT 491 +L+LAPTRELA Q + FG +S CI+GG K Q R+L ++ +V+ T Sbjct: 253 GQIQMLVLAPTRELAQQSHEHLSAFGEQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGT 312 Query: 492 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 PGR +D+ ++G +L V+YLVLDEADRMLD GFE Sbjct: 313 PGRTLDLADSGELDLSSVSYLVLDEADRMLDAGFE 347
>DED1_SCHPO (O13370) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 636 Score = 135 bits (340), Expect = 9e-32 Identities = 75/185 (40%), Positives = 104/185 (56%), Gaps = 16/185 (8%) Frame = +3 Query: 90 KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYIL 269 +P+ F + +Q I SG+ +PTP+Q P+ GRD++ A+TGSGKT ++ Sbjct: 166 EPVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLF 225 Query: 270 PGL----------------VHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYS 401 P L +G +PR P LILAPTREL QI E+ KF S Sbjct: 226 PILSLAFDKGPAAVPVDQDAGMGYRPRKAY---PTTLILAPTRELVCQIHEESRKFCYRS 282 Query: 402 RTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRML 581 R +YGGA QIR + +G +++ ATPGRL+D+++ G +L + +LVLDEADRML Sbjct: 283 WVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRML 342 Query: 582 DMGFE 596 DMGFE Sbjct: 343 DMGFE 347
>DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 627 Score = 135 bits (340), Expect = 9e-32 Identities = 77/181 (42%), Positives = 101/181 (55%), Gaps = 10/181 (5%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+PI FH + I + F +PTP+Q P+ GRD++ A+TGSGKT + Sbjct: 154 VPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGF 213 Query: 264 ILPGLVHVGAQPRLEQGDG----------PIVLILAPTRELAVQIQAEATKFGSYSRTRS 413 + P L + + P +ILAPTRELA QI EA KF S + Sbjct: 214 LFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRSWVKP 273 Query: 414 TCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 +YGGA QI+ +R G +++ATPGRL D+LE + +L V YLVLDEADRMLDMGF Sbjct: 274 MVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLDEADRMLDMGF 333 Query: 594 E 596 E Sbjct: 334 E 334
>PRP28_CANAL (Q59W52) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 581 Score = 135 bits (339), Expect = 1e-31 Identities = 76/177 (42%), Positives = 114/177 (64%), Gaps = 6/177 (3%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 +P P+R+++E + D + I++ G+ EPT +Q P+ALK RDV+G+AETGSGKTL++ Sbjct: 163 IPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGVAETGSGKTLAF 222 Query: 264 ILPGLVHVGA----QPRLEQ-GDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYG 428 ++P L ++ + + E+ + P+ LILAPTRELA+QI EA KF + I G Sbjct: 223 LIPVLNYILSIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKFCKKLGYQVLPIIG 282 Query: 429 GAPKGPQIRDL-RRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 G I + + GV +++ATPGRL+D +E +L + LV+DEADRM+DMGFE Sbjct: 283 GHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIVDLSKCYCLVMDEADRMIDMGFE 339
>DDX4_MACFA (Q4R5S7) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) Length = 725 Score = 135 bits (339), Expect = 1e-31 Identities = 76/173 (43%), Positives = 103/173 (59%), Gaps = 4/173 (2%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P I F EAN IAK+G+ + TP+Q P+ L GRD++ A+TGSGKT +++ Sbjct: 285 PPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFL 344 Query: 267 LPGLVHVG----AQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGA 434 LP L H+ ++ P +I+APTREL QI EA KF + R+ IYGG Sbjct: 345 LPILAHMMHDGITASCFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGT 404 Query: 435 PKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 G IR + +G I+ ATPGRL+D++ L+++ YLVLDEADRMLDMGF Sbjct: 405 QLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGF 457
>DBP3_YEAST (P20447) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-) (DEAD box| protein 3) (Helicase CA3) Length = 523 Score = 134 bits (338), Expect = 2e-31 Identities = 70/148 (47%), Positives = 96/148 (64%) Frame = +3 Query: 153 SGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVL 332 S F +PTPIQA WP L G+DV+G+AETGSGKT ++ +P + H+ + G VL Sbjct: 130 SKFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKR---GIQVL 186 Query: 333 ILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 512 +++PTRELA QI + C+YGG PK Q L++ ++V+ATPGRL+D+ Sbjct: 187 VISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDL 245 Query: 513 LEAGHTNLRRVTYLVLDEADRMLDMGFE 596 L+ G +L +V YLVLDEADRML+ GFE Sbjct: 246 LQEGSVDLSQVNYLVLDEADRMLEKGFE 273
>DED1_USTMA (Q4P733) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 134 bits (338), Expect = 2e-31 Identities = 78/184 (42%), Positives = 104/184 (56%), Gaps = 13/184 (7%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+P+ F + ++ I + + PTP+Q P+ GRD++G A+TGSGKT + Sbjct: 184 VPEPVTTFTSPPIDAHLLENIKLARYTNPTPVQKYSIPIIKLGRDLMGCAQTGSGKTGGF 243 Query: 264 ILP---GLVHVGAQP--RLEQGDG--------PIVLILAPTRELAVQIQAEATKFGSYSR 404 + P L G P E G P LILAPTREL QI EA KF S Sbjct: 244 LFPILSALFTHGPPPPSAAEMAQGGYNRRKAYPSTLILAPTRELVSQIHDEARKFTYRSW 303 Query: 405 TRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD 584 + +YGGA Q+R + RG +++ ATPGRL+D++E G +L V +LVLDEADRMLD Sbjct: 304 VKPAVVYGGADIVTQLRQIERGCDLLSATPGRLVDLMERGRISLSNVRFLVLDEADRMLD 363 Query: 585 MGFE 596 MGFE Sbjct: 364 MGFE 367
>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen| Mab46F11) Length = 661 Score = 134 bits (337), Expect = 2e-31 Identities = 74/170 (43%), Positives = 102/170 (60%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 VP+PI+ F A+ D + + KSG+ PTPIQ P+ GRD++ A+TGSGKT ++ Sbjct: 240 VPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAF 299 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 +LP L + P + P V+I++PTRELA+QI EA KF S + +YGG Sbjct: 300 LLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFR 359 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 Q + RG +VIATPGRL+D ++ ++VLDEADRMLDMGF Sbjct: 360 HQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGF 409
>DBP3_SCHPO (Q10202) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 578 Score = 132 bits (333), Expect = 6e-31 Identities = 68/146 (46%), Positives = 93/146 (63%) Frame = +3 Query: 159 FVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLIL 338 + EPTPIQA WP L GRDV+GIAETGSGKT+++ +P L ++ + P VL++ Sbjct: 185 YKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPALQYLNGLS--DNKSVPRVLVV 242 Query: 339 APTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE 518 +PTRELA+Q + ++ +YGGAPK Q R + ++I TPGRL+D++ Sbjct: 243 SPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQAR-AAKNASVIIGTPGRLLDLIN 301 Query: 519 AGHTNLRRVTYLVLDEADRMLDMGFE 596 G + +V YLVLDEADRMLD GFE Sbjct: 302 DGSIDCSQVGYLVLDEADRMLDTGFE 327
>EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 132 bits (333), Expect = 6e-31 Identities = 72/163 (44%), Positives = 102/163 (62%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F+E N + I K+GFVE +PIQ Q P+AL+G+DVIG A+TG+GKT ++ LP L Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEK 62 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + + Q L++APTRELAVQ Q E +FG + +YGG+ QI+ L+ Sbjct: 63 IRTEEATIQA-----LVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALK 117 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 G IV+ TPGRL+D+++ L+ + L+LDEAD ML+MGF Sbjct: 118 SGAHIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGF 160
>EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 132 bits (333), Expect = 6e-31 Identities = 72/163 (44%), Positives = 102/163 (62%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F+E N + I K+GFVE +PIQ Q P+AL+G+DVIG A+TG+GKT ++ LP L Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEK 62 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + + Q L++APTRELAVQ Q E +FG + +YGG+ QI+ L+ Sbjct: 63 IRTEEATIQA-----LVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALK 117 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 G IV+ TPGRL+D+++ L+ + L+LDEAD ML+MGF Sbjct: 118 SGAHIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGF 160
>DBP3_GIBZE (Q4IJH1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 581 Score = 132 bits (332), Expect = 8e-31 Identities = 66/148 (44%), Positives = 91/148 (61%) Frame = +3 Query: 153 SGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVL 332 + + PTPIQ+ WP L GRDVIG+AETGSGKT+++ LP + + A + Sbjct: 179 ANYKAPTPIQSASWPFTLSGRDVIGVAETGSGKTMAFALPCVEAISALKHKHTK----AV 234 Query: 333 ILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 512 +++PTRELA+Q + + +R + C+YGGA K Q L RG +I++ATPGRL D Sbjct: 235 VVSPTRELAMQTYEQMASVAALNRMKCVCLYGGASKDDQRNLLNRGADIIVATPGRLKDF 294 Query: 513 LEAGHTNLRRVTYLVLDEADRMLDMGFE 596 + G +L + VLDEADRMLD GFE Sbjct: 295 MSDGTVDLSHSAFAVLDEADRMLDKGFE 322
>DDX41_MOUSE (Q91VN6) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) Length = 622 Score = 132 bits (332), Expect = 8e-31 Identities = 75/180 (41%), Positives = 103/180 (57%), Gaps = 9/180 (5%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 +P PI+ F E FP ++ + K G + PTPIQ QG P L GRD+IGIA TGSGKTL + Sbjct: 176 IPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVF 235 Query: 264 ILPGLVHVGAQPR---LEQGDGPIVLILAPTRELA------VQIQAEATKFGSYSRTRST 416 LP ++ Q + + +GP LI+ P+RELA ++ + S R Sbjct: 236 TLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCA 295 Query: 417 CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GG Q+ +R GV +++ATPGRL+D+L+ +L YL LDEADRM+DMGFE Sbjct: 296 LCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFE 355
>DBP3_ASPOR (Q2UMH8) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 132 bits (332), Expect = 8e-31 Identities = 73/149 (48%), Positives = 94/149 (63%), Gaps = 1/149 (0%) Frame = +3 Query: 153 SGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD-GPIV 329 S F PT IQ+ WP+ GRDVIGIAETGSGKTL++ LP L + +Q P+ Sbjct: 98 SSFKSPTSIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKIQDSAMTKQKPYRPLA 157 Query: 330 LILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLID 509 +I++PTRELA+QI + KF R C++GG K Q R+ + +V+ATPGRL D Sbjct: 158 VIISPTRELAMQIYDQLLKFSGSVGVRVACVFGGVRKEEQ-REALKTAGVVVATPGRLKD 216 Query: 510 MLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 + G +L +V YLVLDEADRMLD GFE Sbjct: 217 LQNDGSVDLGKVKYLVLDEADRMLDKGFE 245
>DBP3_ASHGO (Q755A5) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 535 Score = 131 bits (329), Expect = 2e-30 Identities = 72/169 (42%), Positives = 101/169 (59%) Frame = +3 Query: 90 KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYIL 269 +P+ F N + I+K F +PTPIQA WP L G+DVIG+AETGSGKT ++ + Sbjct: 122 RPLLSFSHLNLHSAIQKEISK--FPKPTPIQAVSWPYLLAGKDVIGVAETGSGKTFAFGV 179 Query: 270 PGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 P + + ++ +G L+++PTRELA QI + C+YGG K Q Sbjct: 180 PAINSLMSEKSTPRGVK--CLVISPTRELASQIYDNLVQLTDKVGLNCCCVYGGVQKDSQ 237 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 L++ ++V+ATPGRL+D++E G L V YLVLDEADRML+ GFE Sbjct: 238 REQLKKA-QVVVATPGRLLDLIEEGSAKLAGVQYLVLDEADRMLEKGFE 285
>DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 613 Score = 130 bits (328), Expect = 2e-30 Identities = 66/164 (40%), Positives = 102/164 (62%), Gaps = 1/164 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F++ P++ ++A++ GF P+PIQ P L G DV+G+A+TGSGKT ++ LP L Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQ 66 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSR-TRSTCIYGGAPKGPQIRDL 461 + + P +L++APTRELA+Q+ F Y++ TR +YGG Q+R L Sbjct: 67 IDPSEK-----HPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRAL 121 Query: 462 RRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++G ++V+ TPGR++D + G NL + ++VLDEAD ML MGF Sbjct: 122 KQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGF 165
>DDX41_HUMAN (Q9UJV9) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) (DEAD box protein abstrakt homolog) Length = 622 Score = 130 bits (328), Expect = 2e-30 Identities = 75/180 (41%), Positives = 102/180 (56%), Gaps = 9/180 (5%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 +P PI+ F E FP ++ + K G PTPIQ QG P L GRD+IGIA TGSGKTL + Sbjct: 176 IPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVF 235 Query: 264 ILPGLVHVGAQPR---LEQGDGPIVLILAPTRELA------VQIQAEATKFGSYSRTRST 416 LP ++ Q + + +GP LI+ P+RELA ++ + S R Sbjct: 236 TLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCA 295 Query: 417 CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GG Q+ +R GV +++ATPGRL+D+L+ +L YL LDEADRM+DMGFE Sbjct: 296 LCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFE 355
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 130 bits (328), Expect = 2e-30 Identities = 71/154 (46%), Positives = 102/154 (66%), Gaps = 1/154 (0%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++A+ G+ +P+PIQA+ P L GRDV+G+A+TGSGKT ++ LP L ++ + R Sbjct: 17 LEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAFSLPLLNNIDPELR---- 72 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSR-TRSTCIYGGAPKGPQIRDLRRGVEIVIAT 491 P +L+LAPTRELAVQ+ T+F + R +YGG Q+R LR+G +IV+ T Sbjct: 73 -APQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 492 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 PGRL+D L+ G +L +++ LVLDEAD ML MGF Sbjct: 132 PGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGF 165
>DBP3_NEUCR (Q7S5R1) ATP-dependent RNA helicase dbp-3 (EC 3.6.1.-)| Length = 614 Score = 130 bits (327), Expect = 3e-30 Identities = 71/155 (45%), Positives = 99/155 (63%), Gaps = 8/155 (5%) Frame = +3 Query: 153 SGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPR-----LEQGD 317 + + PTPIQ+ WP +L GRDVIGIAETGSGKT+++ LP + + ++P+ ++ Sbjct: 197 AAYTNPTPIQSASWPFSLSGRDVIGIAETGSGKTMAFSLPCVESLASRPKPKFNSRDRTA 256 Query: 318 GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL---RRGVEIVIA 488 P +I++PTRELA+Q A + S + CI+GG+ K Q R+L GV+I+ A Sbjct: 257 HPRAVIVSPTRELAMQTHAALSGLASLVGLSAVCIFGGSDKNEQ-RNLLYKNNGVDIITA 315 Query: 489 TPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 TPGRL D L G +L V++ VLDEADRMLD GF Sbjct: 316 TPGRLKDFLSEGSISLANVSFAVLDEADRMLDRGF 350
>DBP3_CANAL (Q5APT8) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 564 Score = 129 bits (325), Expect = 5e-30 Identities = 71/169 (42%), Positives = 101/169 (59%) Frame = +3 Query: 90 KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYIL 269 +PI F + ++K F +PTPIQ+ WP L G+DVIG+AETGSGKT ++ + Sbjct: 152 RPILSFDQVQLTSAITSKLSK--FDKPTPIQSVSWPFLLSGKDVIGVAETGSGKTFAFGV 209 Query: 270 PGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 P + ++ + VL ++PTRELA+QI + + S +YGG K Q Sbjct: 210 PAINNIITTGNTKTLS---VLCISPTRELALQIYDNLIELTADSGVNCVAVYGGVSKDDQ 266 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 IR ++ +V+ATPGRL+D++ G NL +V YLVLDEADRML+ GFE Sbjct: 267 IRKIKTA-NVVVATPGRLVDLINDGAINLGKVNYLVLDEADRMLEKGFE 314
>DBP3_CANGA (Q6FS54) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 540 Score = 129 bits (324), Expect = 6e-30 Identities = 73/172 (42%), Positives = 104/172 (60%), Gaps = 3/172 (1%) Frame = +3 Query: 90 KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYIL 269 +P+ F++ + IAK F +PTPIQA WP L G+DVIG+AETGSGKT ++ + Sbjct: 127 RPLLAFNQISLDKEVQNEIAK--FPKPTPIQAVSWPYLLSGKDVIGVAETGSGKTFAFGV 184 Query: 270 PGLVHV---GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPK 440 P + ++ ++P+ G VL+++PTRELA QI +YGG PK Sbjct: 185 PAINNLLTSSSKPK-----GIKVLVISPTRELASQIYDNLVLLTQKVGIDCCVVYGGVPK 239 Query: 441 GPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 Q R + + +V+ATPGRL+D++E G +L V Y+VLDEADRML+ GFE Sbjct: 240 DDQRRQIAKS-NVVVATPGRLLDLIEEGSVDLSPVDYMVLDEADRMLEKGFE 290
>DBP3_DEBHA (Q6BZ77) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 527 Score = 129 bits (323), Expect = 8e-30 Identities = 72/169 (42%), Positives = 100/169 (59%) Frame = +3 Query: 90 KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYIL 269 +P+ F + + I+K F PTPIQA WP L G+DVIG+AETGSGKT ++ + Sbjct: 116 RPLLGFDQIDLDSRIASVISK--FPTPTPIQAVSWPYLLSGKDVIGVAETGSGKTFAFGV 173 Query: 270 PGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 P + ++ + G VL ++PTRELA+QI + + + +YGG K Q Sbjct: 174 PAINNILTHDK----KGLKVLCISPTRELALQIYDNLVDLTANTPLKCVAVYGGVSKHEQ 229 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 + LR +V+ATPGRLID+L G +L + YLVLDEADRML+ GFE Sbjct: 230 VSSLRNA-SVVVATPGRLIDLLNDGALSLDSIEYLVLDEADRMLEKGFE 277
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 129 bits (323), Expect = 8e-30 Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 1/154 (0%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++A+ G+ +P+PIQA+ P L GRDV+G+A+TGSGKT ++ LP L ++ P L+ Sbjct: 17 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNL--DPELK-- 72 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSR-TRSTCIYGGAPKGPQIRDLRRGVEIVIAT 491 P +L+LAPTRELAVQ+ T F + R +YGG Q+R LR+G +IV+ T Sbjct: 73 -APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 492 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 PGRL+D L+ G +L +++ LVLDEAD ML MGF Sbjct: 132 PGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGF 165
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 129 bits (323), Expect = 8e-30 Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 1/154 (0%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++A+ G+ +P+PIQA+ P L GRDV+G+A+TGSGKT ++ LP L ++ P L+ Sbjct: 17 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNL--DPELK-- 72 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSR-TRSTCIYGGAPKGPQIRDLRRGVEIVIAT 491 P +L+LAPTRELAVQ+ T F + R +YGG Q+R LR+G +IV+ T Sbjct: 73 -APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 492 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 PGRL+D L+ G +L +++ LVLDEAD ML MGF Sbjct: 132 PGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGF 165
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 129 bits (323), Expect = 8e-30 Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 1/154 (0%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++A+ G+ +P+PIQA+ P L GRDV+G+A+TGSGKT ++ LP L ++ P L+ Sbjct: 17 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNL--DPELK-- 72 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSR-TRSTCIYGGAPKGPQIRDLRRGVEIVIAT 491 P +L+LAPTRELAVQ+ T F + R +YGG Q+R LR+G +IV+ T Sbjct: 73 -APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 492 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 PGRL+D L+ G +L +++ LVLDEAD ML MGF Sbjct: 132 PGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGF 165
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 129 bits (323), Expect = 8e-30 Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 1/154 (0%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++A+ G+ +P+PIQA+ P L GRDV+G+A+TGSGKT ++ LP L ++ P L+ Sbjct: 17 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNL--DPELK-- 72 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSR-TRSTCIYGGAPKGPQIRDLRRGVEIVIAT 491 P +L+LAPTRELAVQ+ T F + R +YGG Q+R LR+G +IV+ T Sbjct: 73 -APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 492 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 PGRL+D L+ G +L +++ LVLDEAD ML MGF Sbjct: 132 PGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGF 165
>RRP3_EMENI (Q5B5E7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 128 bits (322), Expect = 1e-29 Identities = 78/174 (44%), Positives = 99/174 (56%), Gaps = 1/174 (0%) Frame = +3 Query: 75 AGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKT 254 +G P P + F E D +A G+ PTPIQ+Q P+AL+GRDVIG+AETGSGKT Sbjct: 38 SGEEPAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKT 97 Query: 255 LSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGA 434 ++ LP L + P+ G L+LAPTRELA QI GS R I GG Sbjct: 98 AAFALPMLQALMEAPQTLFG-----LVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGM 152 Query: 435 PKGPQIRDLRRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 593 Q L + I++ATPGRL+D LE +LR + YL +DEADR+LDM F Sbjct: 153 DMVAQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDMDF 206
>DEAD_BUCAP (Q8K9H6) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 128 bits (322), Expect = 1e-29 Identities = 71/156 (45%), Positives = 102/156 (65%), Gaps = 1/156 (0%) Frame = +3 Query: 129 YCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE 308 + +++++K G+V+P+PIQA P+ L+GRDV+G+A+TGSGKT ++ LP L ++ + Sbjct: 16 FIIKSLSKMGYVKPSPIQAACIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNLNINLK-- 73 Query: 309 QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTC-IYGGAPKGPQIRDLRRGVEIVI 485 P +L+LAPTRELAVQ+ + F Y +YGG Q+R LR+G +IV+ Sbjct: 74 ---APQILVLAPTRELAVQVAEAFSDFSKYIMGIHVLPLYGGQRYEVQLRALRQGPQIVV 130 Query: 486 ATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 TPGRL+D L+ G NL + LVLDEAD ML MGF Sbjct: 131 GTPGRLLDHLKRGTLNLSNLYALVLDEADEMLRMGF 166
>RRP3_DEBHA (Q6BQ61) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 477 Score = 128 bits (322), Expect = 1e-29 Identities = 75/166 (45%), Positives = 102/166 (61%), Gaps = 3/166 (1%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F+E ++AI + F +PTPIQ++ P AL+G+D+IG+A+TGSGKT ++ +P L Sbjct: 67 FNELKLIPELLEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQA 126 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + G L+LAPTRELA QI+ GS RS CI GG Q RDL Sbjct: 127 LWEAQAAYYG-----LVLAPTRELAYQIKETFDALGSSMGLRSVCIVGGMDMMDQARDLM 181 Query: 465 RGVEIVIATPGRLIDMLEAGHT---NLRRVTYLVLDEADRMLDMGF 593 R I++ATPGR++D LE HT +L+ + YLV+DEADR+LDM F Sbjct: 182 RKPHILVATPGRIMDHLE--HTKGFSLKNLKYLVMDEADRLLDMDF 225
>RRP3_YEAST (P38712) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-) (Ribosomal| RNA-processing protein RRP3) Length = 501 Score = 127 bits (320), Expect = 2e-29 Identities = 78/165 (47%), Positives = 99/165 (60%), Gaps = 2/165 (1%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E N +QA + +PTPIQ++ P AL+G D+IG+A+TGSGKT ++ +P L Sbjct: 83 FSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPIL-- 140 Query: 285 VGAQPRLEQGDGPI-VLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL 461 RL P ILAPTRELA QI+ GS RSTCI GG Q RDL Sbjct: 141 ----NRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDL 196 Query: 462 RRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 593 R I+IATPGRL+D LE +LR++ +LV+DEADR+LDM F Sbjct: 197 MRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEF 241
>RRP3_KLULA (Q6CT85) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 127 bits (319), Expect = 2e-29 Identities = 78/166 (46%), Positives = 99/166 (59%), Gaps = 3/166 (1%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E + ++A + +PTPIQ++ P ALKG D+IG+A+TGSGKT ++ +P L Sbjct: 69 FTELDLVPELIEACKNLNYNKPTPIQSKAIPPALKGSDIIGLAQTGSGKTAAFAIPILNQ 128 Query: 285 V--GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRD 458 + QP ILAPTRELA QI+ GS RSTCI GG Q RD Sbjct: 129 LWHDQQPYY-------ACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMSMMDQARD 181 Query: 459 LRRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 593 L R I+IATPGRL+D LE NLR++ YLV+DEADR+LDM F Sbjct: 182 LMRKPHIIIATPGRLMDHLENTKGFNLRKLKYLVMDEADRLLDMEF 227
>DEAD_BUCAI (P57453) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 127 bits (318), Expect = 3e-29 Identities = 71/156 (45%), Positives = 101/156 (64%), Gaps = 1/156 (0%) Frame = +3 Query: 129 YCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE 308 + +Q++ + G+V+P+PIQA P+ L+GRDV+G+A+TGSGKT ++ LP L ++ + Sbjct: 16 FIIQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNLNINLK-- 73 Query: 309 QGDGPIVLILAPTRELAVQIQAEATKFGSYS-RTRSTCIYGGAPKGPQIRDLRRGVEIVI 485 P +L+LAPTRELAVQ+ + F Y +YGG Q+R LR+G +IV+ Sbjct: 74 ---APQILVLAPTRELAVQVAEAFSDFSKYMIGIHVLPLYGGQRYELQLRALRQGPQIVV 130 Query: 486 ATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 TPGRL+D L+ G NL + LVLDEAD ML MGF Sbjct: 131 GTPGRLLDHLKRGTLNLSNLHGLVLDEADEMLRMGF 166
>RHLB_XYLFA (Q9PA24) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 126 bits (316), Expect = 5e-29 Identities = 73/156 (46%), Positives = 98/156 (62%), Gaps = 3/156 (1%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL--E 308 + + ++GF TPIQA P+AL GRD+ G A+TG+GKTL++++ + + ++P L Sbjct: 21 LTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNRLLSRPGLVNR 80 Query: 309 QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 488 + P LILAPTRELA+QI +A KFG R IYGG Q LR+G ++VIA Sbjct: 81 NPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDKQREMLRKGADVVIA 140 Query: 489 TPGRLIDMLEAGH-TNLRRVTYLVLDEADRMLDMGF 593 TPGRLID L+ +LR VLDEADRM D+GF Sbjct: 141 TPGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGF 176
>RHLB_XYLFT (Q879Y6) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 125 bits (314), Expect = 9e-29 Identities = 73/156 (46%), Positives = 97/156 (62%), Gaps = 3/156 (1%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL--E 308 + + ++GF TPIQA P+AL GRD+ G A+TG+GKTL++++ + + + P L Sbjct: 21 LTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNRLLSSPGLVNR 80 Query: 309 QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 488 + P LILAPTRELA+QI +A KFG R IYGG Q LR+G ++VIA Sbjct: 81 NPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDRQREMLRKGADVVIA 140 Query: 489 TPGRLIDMLEAGH-TNLRRVTYLVLDEADRMLDMGF 593 TPGRLID L+ +LR VLDEADRM D+GF Sbjct: 141 TPGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGF 176
>PRP28_KLULA (Q6CT49) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 539 Score = 125 bits (314), Expect = 9e-29 Identities = 77/182 (42%), Positives = 105/182 (57%), Gaps = 7/182 (3%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANF-PDYCMQAIAKS-GFVEPTPIQAQGWPMALKGRDVIGIAETGS 245 + G V KP+R +HE P+ + I + EPT IQ P + RD IG+A TGS Sbjct: 127 KGGTVEKPLRNWHELKLIPEDLLNIITNDLHYNEPTSIQRSTIPNVINNRDFIGVASTGS 186 Query: 246 GKTLSYILPGLVHVGAQPRLE---QGDGPIVLILAPTRELAVQIQAEATKFGSYSRT--R 410 GKTL+++LP L+ + P L + DGP+ L+LAPTRELA QIQ E + Sbjct: 187 GKTLAFLLPILIKLHGIPPLNSITKHDGPLALVLAPTRELAQQIQHEGQSITKLWKRPCN 246 Query: 411 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMG 590 I GG +LR G +I++ATPGRL+D L++ L++V LVLDEAD+M+D G Sbjct: 247 IVSIVGGHSLEEISANLRDGCDILVATPGRLLDCLDSHLLFLKQVNTLVLDEADKMIDFG 306 Query: 591 FE 596 FE Sbjct: 307 FE 308
>RHLB_PHOLL (Q7MYL2) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 125 bits (314), Expect = 9e-29 Identities = 72/168 (42%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Frame = +3 Query: 111 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 E F D+ + +A+ GF TPIQA P ++GRDV G A+TG+GKTL+++ Sbjct: 8 EKKFSDFALHPKVIEALDNKGFSNCTPIQALTLPFTVEGRDVAGQAQTGTGKTLAFLASA 67 Query: 276 LVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 ++ P E Q + P LI+APTRELAVQI ++A + + YGG Q Sbjct: 68 FHYLLTHPAAEERQTNQPRALIMAPTRELAVQIYSDAEDLAQATGLKMGLAYGGDGYDKQ 127 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++ L GV+I+I T GRLID + GH NL V +VLDEADRM D+GF Sbjct: 128 LKILESGVDILIGTTGRLIDYTKQGHINLNAVQVVVLDEADRMYDLGF 175
>DEAD_MYCTU (Q11039) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 563 Score = 125 bits (313), Expect = 1e-28 Identities = 67/154 (43%), Positives = 96/154 (62%), Gaps = 1/154 (0%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++AI G+ PT IQA P + G DV+G+A+TG+GKT ++ +P L + ++ Q Sbjct: 25 LRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQA 84 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSY-SRTRSTCIYGGAPKGPQIRDLRRGVEIVIAT 491 L+L PTRELA+Q+ ++G+Y S+ IYGG+ Q+ LRRG ++V+ T Sbjct: 85 -----LVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQVVVGT 139 Query: 492 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 PGR+ID LE +L RV +LVLDEAD ML MGF Sbjct: 140 PGRMIDHLERATLDLSRVDFLVLDEADEMLTMGF 173
>RRP3_CANGA (Q6FNK8) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 493 Score = 124 bits (312), Expect = 2e-28 Identities = 76/165 (46%), Positives = 98/165 (59%), Gaps = 2/165 (1%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + N +QA F +PTPIQA+ P AL G DVIG+A+TGSGKT ++ +P L Sbjct: 75 FAQLNLVPELIQACQNLNFTKPTPIQARAIPPALAGSDVIGLAQTGSGKTAAFAIPIL-- 132 Query: 285 VGAQPRLEQGDGPI-VLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL 461 +L + P +LAPTRELA QI+ GS R+TCI GG Q RDL Sbjct: 133 ----NKLWEDQQPYYACVLAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDL 188 Query: 462 RRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 593 R I+IATPGRL+D LE +L+ + +LV+DEADR+LDM F Sbjct: 189 MRKPHIIIATPGRLMDHLENTKGFSLKNLKFLVMDEADRLLDMEF 233
>RHLB_SALTY (P0A2P0) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 124 bits (312), Expect = 2e-28 Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 7/168 (4%) Frame = +3 Query: 111 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 E F D+ + +A+ K GF TPIQA P+ L GRDV G A+TG+GKT++++ Sbjct: 7 EQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 66 Query: 276 LVHVGAQPRLEQG--DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 ++ + P ++ + P LI+APTRELAVQI A+A + + YGG Q Sbjct: 67 FHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYGGDGYDKQ 126 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++ L GV+I+I T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>RHLB_SALTI (P0A2P1) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 124 bits (312), Expect = 2e-28 Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 7/168 (4%) Frame = +3 Query: 111 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 E F D+ + +A+ K GF TPIQA P+ L GRDV G A+TG+GKT++++ Sbjct: 7 EQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 66 Query: 276 LVHVGAQPRLEQG--DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 ++ + P ++ + P LI+APTRELAVQI A+A + + YGG Q Sbjct: 67 FHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYGGDGYDKQ 126 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++ L GV+I+I T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>RRP3_GIBZE (Q4IFI0) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 486 Score = 124 bits (310), Expect = 3e-28 Identities = 76/171 (44%), Positives = 98/171 (57%), Gaps = 1/171 (0%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 V P + F + D +A K + PTPIQ + P+AL+GRD+IG+AETGSGKT ++ Sbjct: 55 VDAPKKTFKDLGVNDALCEACEKLNYKYPTPIQEKSIPVALQGRDIIGLAETGSGKTAAF 114 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 LP L Q L++ L+LAPTRELA QI GS R I GG Sbjct: 115 ALPVL-----QALLDKPQPLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDMV 169 Query: 444 PQIRDLRRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 593 PQ L + IV+ATPGRL+D LE +LR + YL++DEADR+LDM F Sbjct: 170 PQAIALGKKPHIVVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDF 220
>RRP3_CANAL (Q5ACU6) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 399 Score = 123 bits (309), Expect = 3e-28 Identities = 71/150 (47%), Positives = 96/150 (64%), Gaps = 5/150 (3%) Frame = +3 Query: 159 FVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHV--GAQPRLEQGDGPIVL 332 F +PTPIQ++ P AL+G+D+IG+A+TGSGKT ++ +P L + QP L Sbjct: 3 FTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWHAQQPYF-------AL 55 Query: 333 ILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 512 +LAPTRELA QI+ GS RS+CI GG Q RDL R +++ATPGR++D Sbjct: 56 VLAPTRELAFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMRKPHVIVATPGRIMDH 115 Query: 513 LEAGHT---NLRRVTYLVLDEADRMLDMGF 593 LE HT +L+ + YLV+DEADR+LDM F Sbjct: 116 LE--HTKGFSLKNLKYLVMDEADRLLDMDF 143
>SRMB_ECOLI (P21507) ATP-dependent RNA helicase srmB (EC 3.6.1.-)| Length = 444 Score = 123 bits (309), Expect = 3e-28 Identities = 69/163 (42%), Positives = 93/163 (57%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E + ++A+ GF PT IQA P AL GRDV+G A TG+GKT +Y+LP L H Sbjct: 6 FSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQH 65 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + PR + G P +LIL PTRELA+Q+ A + ++ I GG Sbjct: 66 LLDFPRKKSGP-PRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFS 124 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 +IV+AT GRL+ ++ + + R V L+LDEADRMLDMGF Sbjct: 125 ENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGF 167
>RRP3_ASPFU (Q4WJE9) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 123 bits (308), Expect = 5e-28 Identities = 77/170 (45%), Positives = 97/170 (57%), Gaps = 1/170 (0%) Frame = +3 Query: 87 PKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI 266 P P + F + D +A G+ PTPIQA+ P+AL+GRD+IG+AETGSGKT ++ Sbjct: 49 PAP-KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFA 107 Query: 267 LPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGP 446 LP L Q +E LILAPTRELA QI GS R I GG Sbjct: 108 LPIL-----QALMENPQSFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVS 162 Query: 447 QIRDLRRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 593 Q L + I++ATPGRL+D LE +LR + YLV+DEADR+LDM F Sbjct: 163 QSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDF 212
>RRP3_ASHGO (Q75EW9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 123 bits (308), Expect = 5e-28 Identities = 75/166 (45%), Positives = 98/166 (59%), Gaps = 3/166 (1%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E + ++A F +PTPIQ++ P AL+G+D+IG+A+TGSGKT ++ +P L Sbjct: 68 FRELDLVPELIEACDNLNFTKPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFAIPIL-- 125 Query: 285 VGAQPRLEQGDGPI-VLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL 461 RL P ILAPTRELA QI+ GS R+TCI GG Q RDL Sbjct: 126 ----NRLWHDQQPYYACILAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDL 181 Query: 462 RRGVEIVIATPGRLIDMLEAGHTN--LRRVTYLVLDEADRMLDMGF 593 R I+IATPGRL+D LE LR+ +LV+DEADR+L+M F Sbjct: 182 MRKPHIIIATPGRLMDHLEVHKRGFALRKQQFLVMDEADRLLNMKF 227
>RHLB_SHIFL (P0A8K0) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 123 bits (308), Expect = 5e-28 Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 7/168 (4%) Frame = +3 Query: 111 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 E F D+ + +A+ K GF TPIQA P+ L GRDV G A+TG+GKT++++ Sbjct: 7 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 66 Query: 276 LVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 ++ + P + + + P LI+APTRELAVQI A+A + + YGG Q Sbjct: 67 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 126 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++ L GV+I+I T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>RHLB_ECOLI (P0A8J8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 123 bits (308), Expect = 5e-28 Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 7/168 (4%) Frame = +3 Query: 111 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 E F D+ + +A+ K GF TPIQA P+ L GRDV G A+TG+GKT++++ Sbjct: 7 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 66 Query: 276 LVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 ++ + P + + + P LI+APTRELAVQI A+A + + YGG Q Sbjct: 67 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 126 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++ L GV+I+I T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>RHLB_ECOL6 (P0A8J9) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 123 bits (308), Expect = 5e-28 Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 7/168 (4%) Frame = +3 Query: 111 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 E F D+ + +A+ K GF TPIQA P+ L GRDV G A+TG+GKT++++ Sbjct: 7 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 66 Query: 276 LVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 ++ + P + + + P LI+APTRELAVQI A+A + + YGG Q Sbjct: 67 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 126 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++ L GV+I+I T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>PRP28_CANGA (Q6FM43) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 582 Score = 121 bits (304), Expect = 1e-27 Identities = 79/188 (42%), Positives = 107/188 (56%), Gaps = 15/188 (7%) Frame = +3 Query: 78 GXVPKPIRFFHEAN-FPDYCMQAIAKS-GFVEPTPIQAQGWPMALKG-----RDVIGIAE 236 G V P+R + E N P ++A+ + GF EPT IQ P A+ RD++GIA Sbjct: 162 GAVKHPLRNWSETNVIPTDLVRALTEGMGFDEPTAIQRITIPNAISSNKSVPRDILGIAS 221 Query: 237 TGSGKTLSYILPGLVHVGAQP----RLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSR 404 TGSGKTL++ +P L + A P L+ DGP+ L+L PTRELA QI E + S Sbjct: 222 TGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQEINRLLSAWE 281 Query: 405 TR----STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEAD 572 + + I GG LR G +I+IATPGRL+D+L+ L ++ LVLDEAD Sbjct: 282 NKKNLNAVSIVGGHSMSDISHTLRNGCDILIATPGRLLDVLDNHLVVLNKIQSLVLDEAD 341 Query: 573 RMLDMGFE 596 RM+D+GFE Sbjct: 342 RMIDLGFE 349
>RHLB_YERPS (Q66G19) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 121 bits (303), Expect = 2e-27 Identities = 70/168 (41%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Frame = +3 Query: 111 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 E F D+ + +A+ GF TPIQA P+ L GRDV G A+TG+GKTL+++ Sbjct: 8 EQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLAST 67 Query: 276 LVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 ++ + P E Q + P LI+APTRELAVQI ++A + + YGG Q Sbjct: 68 FHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGGDGYDKQ 127 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++ L GV+I+I T GRLID + + NL + +VLDEADRM D+GF Sbjct: 128 LKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGF 175
>RHLB_YERPE (Q8ZAD8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 121 bits (303), Expect = 2e-27 Identities = 70/168 (41%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Frame = +3 Query: 111 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 E F D+ + +A+ GF TPIQA P+ L GRDV G A+TG+GKTL+++ Sbjct: 8 EQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLAST 67 Query: 276 LVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 ++ + P E Q + P LI+APTRELAVQI ++A + + YGG Q Sbjct: 68 FHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGGDGYDKQ 127 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++ L GV+I+I T GRLID + + NL + +VLDEADRM D+GF Sbjct: 128 LKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGF 175
>RHLB_ECO57 (Q8XAT4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 121 bits (303), Expect = 2e-27 Identities = 70/168 (41%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Frame = +3 Query: 111 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 E F D+ + +A+ K GF TPIQA P+ L GRDV G A+TG+GKT++++ Sbjct: 7 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 66 Query: 276 LVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 + + P + + + P LI+APTRELAVQI A+A + + YGG Q Sbjct: 67 FHCLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 126 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++ L GV+I+I T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 573 Score = 120 bits (302), Expect = 2e-27 Identities = 69/153 (45%), Positives = 96/153 (62%), Gaps = 3/153 (1%) Frame = +3 Query: 144 IAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGD 317 + +GF TPIQA P+AL G DV G A+TG+GKTL++++ + + +P L + + Sbjct: 24 LESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADRKPE 83 Query: 318 GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 497 P LILAPTRELA+QI +A KFG+ R +YGG Q L++GV+++IATPG Sbjct: 84 DPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPG 143 Query: 498 RLIDMLEAGH-TNLRRVTYLVLDEADRMLDMGF 593 RLID ++ +L VLDEADRM D+GF Sbjct: 144 RLIDYVKQHKVVSLHACEICVLDEADRMFDLGF 176
>RRP3_NEUCR (Q7RY59) ATP-dependent rRNA helicase rrp-3 (EC 3.6.1.-)| Length = 515 Score = 120 bits (302), Expect = 2e-27 Identities = 73/164 (44%), Positives = 94/164 (57%), Gaps = 1/164 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + D +A + G+ PTPIQ Q P+AL+ RD+IGIAETGSGKT ++ LP L Sbjct: 92 FKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGSGKTAAFALPIL-- 149 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 Q L++ L+LAPTRELA QI GS R I GG Q L Sbjct: 150 ---QALLDKPAPLFALVLAPTRELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALG 206 Query: 465 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 593 + +++ATPGRL+D LE +LR + YLV+DEADR+LDM F Sbjct: 207 KKPHVIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDF 250
>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 571 Score = 120 bits (302), Expect = 2e-27 Identities = 69/153 (45%), Positives = 96/153 (62%), Gaps = 3/153 (1%) Frame = +3 Query: 144 IAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGD 317 + +GF TPIQA P+AL G DV G A+TG+GKTL++++ + + +P L + + Sbjct: 24 LESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADRKPE 83 Query: 318 GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 497 P LILAPTRELA+QI +A KFG+ R +YGG Q L++GV+++IATPG Sbjct: 84 DPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPG 143 Query: 498 RLIDMLEAGH-TNLRRVTYLVLDEADRMLDMGF 593 RLID ++ +L VLDEADRM D+GF Sbjct: 144 RLIDYVKQHKVVSLHACEICVLDEADRMFDLGF 176
>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 574 Score = 120 bits (301), Expect = 3e-27 Identities = 69/153 (45%), Positives = 96/153 (62%), Gaps = 3/153 (1%) Frame = +3 Query: 144 IAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGD 317 + +GF TPIQA P+AL G DV G A+TG+GKTL++++ + + +P L + + Sbjct: 24 LESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLNRPALADRKPE 83 Query: 318 GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 497 P LILAPTRELA+QI +A KFG+ R +YGG Q L++GV+++IATPG Sbjct: 84 DPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPG 143 Query: 498 RLIDMLEAGH-TNLRRVTYLVLDEADRMLDMGF 593 RLID ++ +L VLDEADRM D+GF Sbjct: 144 RLIDYVKQHKVVSLHACEICVLDEADRMFDLGF 176
>RHLB_SHEON (Q8EJQ5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 439 Score = 120 bits (301), Expect = 3e-27 Identities = 64/154 (41%), Positives = 98/154 (63%), Gaps = 2/154 (1%) Frame = +3 Query: 138 QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHV--GAQPRLEQ 311 QA+A++GF TPIQA P+ L+ +D+ G A+TG+GKT+++++ H+ + P Q Sbjct: 22 QALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSSSIPEGRQ 81 Query: 312 GDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIAT 491 + P +I+APTRELA+QI +A ++R + +YGG Q + L +GV+I+I T Sbjct: 82 LNQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQGVDILIGT 141 Query: 492 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 GR+ID + G NL + +VLDEADRM D+GF Sbjct: 142 TGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGF 175
>RHLB_ERWCT (Q6CZD9) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 429 Score = 120 bits (301), Expect = 3e-27 Identities = 69/168 (41%), Positives = 97/168 (57%), Gaps = 7/168 (4%) Frame = +3 Query: 111 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 E F D+ + +A+ GF TPIQA P+ L GRDV G A+TG+GKTL+++ Sbjct: 7 EQKFSDFALHPQVIEALESKGFHYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLAST 66 Query: 276 LVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 ++ + P Q + P LI+APTRELAVQI ++A + + YGG Q Sbjct: 67 FHYLLSHPANAERQTNQPRALIMAPTRELAVQIHSDAEALSHLTGLKLGLAYGGDGYDKQ 126 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++ L GV+I++ T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLENGVDILVGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>RRP3_ASPOR (Q2UNB7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 120 bits (300), Expect = 4e-27 Identities = 73/164 (44%), Positives = 96/164 (58%), Gaps = 1/164 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E + +A G+ PT IQA+ P+AL+GRD+IG+AETGSGKT ++ LP L Sbjct: 54 FKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPIL-- 111 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 Q +++ L+LAPTRELA QI GS RST + GG Q L Sbjct: 112 ---QALMDKPSSFFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALG 168 Query: 465 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 593 + I++ATPGRL+D LE +LR + YLV+DEADR+LDM F Sbjct: 169 KKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDF 212
>HAS1_CANAL (Q5AK59) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 565 Score = 120 bits (300), Expect = 4e-27 Identities = 64/164 (39%), Positives = 102/164 (62%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F A+F + M+AI + GF + T +QA+ P L GRDV+G A+TGSGKTL++++P + Sbjct: 110 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPA-IE 168 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + +++ +G V+I+ PTRELA+QI A + + + GGA + + L Sbjct: 169 LLYSLKIKPRNGTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGADRRQEATKLA 228 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 +GV +++ATPGRL+D L+ + LV+DEADR+L++GFE Sbjct: 229 KGVNLLVATPGRLLDHLKNTQFVFSNLKALVIDEADRILEIGFE 272
>RHLB_PASMU (Q9CJS1) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 423 Score = 120 bits (300), Expect = 4e-27 Identities = 65/153 (42%), Positives = 95/153 (62%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 + A+ + GF TPIQA PM+L G+DV G A+TG+GKT++++ H+ Q + G Sbjct: 21 LAALQEKGFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKTMAFLTATFHHLLTQQGDKGG 80 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 P LILAPTRELAVQI +A + ++ YGG Q++ + +GV+I+I T Sbjct: 81 RQPRALILAPTRELAVQINNDAALLTKATGLKTGLAYGGDGYEKQLKAIEQGVDILIGTT 140 Query: 495 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 GR+ID ++ G L ++ +VLDEADRM D+GF Sbjct: 141 GRVIDYVKQGIVRLDKIQVVVLDEADRMFDLGF 173
>HAS1_NEUCR (Q7S2N9) ATP-dependent RNA helicase has-1 (EC 3.6.1.-)| Length = 578 Score = 119 bits (299), Expect = 5e-27 Identities = 65/164 (39%), Positives = 101/164 (61%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E N D M+AIA+ GF + T IQ +G P L G+DV+G A+TGSGKTL++++P + Sbjct: 109 FSELNLSDKTMKAIAEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEM 168 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + + R + +G +++ PTRELA+QI A + + GGA + + L Sbjct: 169 LSSL-RFKPRNGTGAIVVTPTRELALQIFGVARELMKNHSQTYGVVIGGANRRAEAEKLG 227 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 +GV ++IATPGRL+D L+ + + L++DEADR+L++GFE Sbjct: 228 KGVNLLIATPGRLLDHLQNTPFVFKNMRSLIIDEADRILEIGFE 271
>DDX47_HUMAN (Q9H0S4) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 119 bits (299), Expect = 5e-27 Identities = 74/165 (44%), Positives = 95/165 (57%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + D +A + G+ +PT IQ + P+AL+GRD+IG+AETGSGKT ++ LP L Sbjct: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL-- 83 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 LE L+L PTRELA QI + GS +S I GG Q L Sbjct: 84 ---NALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALA 140 Query: 465 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 596 + I+IATPGRLID LE NLR + YLV+DEADR+L+M FE Sbjct: 141 KKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFE 185
>DRS1_GIBZE (Q4I830) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 796 Score = 119 bits (298), Expect = 7e-27 Identities = 70/154 (45%), Positives = 99/154 (64%), Gaps = 1/154 (0%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 M+ +A GF +PTPIQA+ P+AL G+DV+G AETGSGKT ++ILP L + +P+ + Sbjct: 268 MRGLASVGFTKPTPIQAKSIPIALMGKDVVGGAETGSGKTGAFILPILERLLYRPK--KI 325 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 V++L PTRELA+Q A ATK +++ + T GG Q +L+ +++IATP Sbjct: 326 PTTRVVVLLPTRELAIQCHAVATKLAAFTDIKFTLAVGGLSLKAQELELKLRPDVIIATP 385 Query: 495 GRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGF 593 GR ID M + ++ V LVLDEADRML+ GF Sbjct: 386 GRFIDHMRNSASFSVDTVEILVLDEADRMLEDGF 419
>RHLB_HAEIN (P44922) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 415 Score = 119 bits (298), Expect = 7e-27 Identities = 69/153 (45%), Positives = 94/153 (61%), Gaps = 2/153 (1%) Frame = +3 Query: 141 AIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHV--GAQPRLEQG 314 A+AK GF TPIQA P++L GRDV G A+TG+GKT++++ H+ P L+ Sbjct: 23 ALAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKTMAFLTATFHHLLTHQDPNLKYP 82 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 P LILAPTRELAVQI +A S ++ YGG Q++ + RGV+I+I T Sbjct: 83 H-PRALILAPTRELAVQISNDAEFLAKASGLKTALAYGGDGYDKQLQAIERGVDILIGTT 141 Query: 495 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 GR+ID ++ G L + +VLDEADRM D+GF Sbjct: 142 GRVIDYVKQGVIGLDEIQVVVLDEADRMFDLGF 174
>DEAD_BUCBP (Q89AF9) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 602 Score = 118 bits (296), Expect = 1e-26 Identities = 67/155 (43%), Positives = 98/155 (63%), Gaps = 4/155 (2%) Frame = +3 Query: 141 AIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDG 320 A+ G+V+P+PIQA P +KG+DV+G+A+TGSGKT ++ LP L ++ R+ Q Sbjct: 20 ALNDIGYVQPSPIQAACIPYLIKGKDVLGMAQTGSGKTAAFALPLLHNIKLDVRVPQ--- 76 Query: 321 PIVLILAPTRELAVQIQAEATKFGSYSR----TRSTCIYGGAPKGPQIRDLRRGVEIVIA 488 +L+L PTRELAVQ+ A F ++S+ +YGG Q++ LR+G +I++ Sbjct: 77 --ILVLTPTRELAVQV---AEAFSNFSKKLIGVHVLALYGGQRYDLQLKSLRKGPQIIVG 131 Query: 489 TPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 TPGRL+D L+ +L + LVLDEAD ML MGF Sbjct: 132 TPGRLLDHLKRRTLSLSNLHSLVLDEADEMLRMGF 166
>DDX47_MOUSE (Q9CWX9) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 118 bits (295), Expect = 1e-26 Identities = 74/165 (44%), Positives = 94/165 (56%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + D +A + G+ +PT IQ + P+AL+GRD+IG+AETGSGKT ++ LP L Sbjct: 26 FKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL-- 83 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 LE L+L PTRELA QI + GS + I GG Q L Sbjct: 84 ---NALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALA 140 Query: 465 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 596 + IVIATPGRLID LE NLR + YLV+DEADR+L+M FE Sbjct: 141 KKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFE 185
>HAS1_GIBZE (Q4IEK8) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 590 Score = 117 bits (294), Expect = 2e-26 Identities = 64/164 (39%), Positives = 104/164 (63%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E + M+AI + F + T IQ +G P +L GRDV+G A+TGSGKTL++++P ++ Sbjct: 117 FEELKLSEKTMKAINEMKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIP-VIE 175 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + + R + +G V++++PTRELA+QI A + ++ + GGA + + L Sbjct: 176 MLSSLRFKPRNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAEAEKLA 235 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 +GV ++IATPGRL+D L+ + + LV+DEADR+L++GFE Sbjct: 236 KGVNLLIATPGRLLDHLQNTPFVFKNLKSLVIDEADRILEIGFE 279
>RRP3_CRYNE (Q5KBE2) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 484 Score = 117 bits (292), Expect = 3e-26 Identities = 70/158 (44%), Positives = 96/158 (60%), Gaps = 1/158 (0%) Frame = +3 Query: 123 PDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPR 302 P+ C +A A GF +P+ IQA+ P AL+G+D+IG+A+TGSGKT ++ LP L Q Sbjct: 47 PELC-RACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPIL-----QTL 100 Query: 303 LEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIV 482 E L+LAPTRELA QI + T GS R+ + GG Q L + I+ Sbjct: 101 WENPQPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSKRPHII 160 Query: 483 IATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 593 +ATPGRL+D LE +L+ + YLV+DEADR+LD+ F Sbjct: 161 VATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDF 198
>RHLB_PSESM (Q887N8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 115 bits (288), Expect = 1e-25 Identities = 71/166 (42%), Positives = 94/166 (56%), Gaps = 3/166 (1%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 FH+ N M AI GF TPIQA LKG+D IG A+TG+GKT ++++ + Sbjct: 10 FHDFNLAPELMHAIQDLGFPYCTPIQAGVLGFTLKGKDAIGRAQTGTGKTAAFLISIIEQ 69 Query: 285 VG-AQPRLEQGDG-PIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRD 458 + P E+ G P LI+APTREL VQI +A Y+ GG Q++ Sbjct: 70 LTQTPPPAERYMGEPRALIIAPTRELVVQIAKDAADLTKYTNLNVMTFVGGMDFDKQLKQ 129 Query: 459 LR-RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 L R +I++ATPGRL+D + G +L V +VLDEADRMLDMGF Sbjct: 130 LEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGF 175
>RHLB_PSEAE (Q9HXE5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 115 bits (288), Expect = 1e-25 Identities = 69/166 (41%), Positives = 93/166 (56%), Gaps = 3/166 (1%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 FH+ N M AI GF TPIQAQ L+G+D IG A+TG+GKT ++++ + Sbjct: 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 70 Query: 285 V--GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRD 458 + P+ P LI+APTREL VQI +A Y+ GG Q++ Sbjct: 71 LLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQ 130 Query: 459 LR-RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 L R +I++ATPGRL+D + G +L V +VLDEADRMLDMGF Sbjct: 131 LEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGF 176
>HAS1_ASHGO (Q74Z73) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 504 Score = 115 bits (287), Expect = 1e-25 Identities = 64/165 (38%), Positives = 101/165 (61%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E N ++AI K GF + T +QA+ P + GRDV+G A+TGSGKTL+++LP + Sbjct: 41 FDELNLSSQTLKAIGKMGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEM 100 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + + + + +G V+++ PTRELA+QI A + + + GGA + + L Sbjct: 101 LHSL-KFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLA 159 Query: 465 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 596 +GV ++IATPGRL+D L+ + + LV+DEADR+L++GFE Sbjct: 160 KGVNLLIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFE 204
>RHLB_VIBCH (Q9KV52) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 438 Score = 115 bits (287), Expect = 1e-25 Identities = 67/168 (39%), Positives = 96/168 (57%), Gaps = 7/168 (4%) Frame = +3 Query: 111 EANFPDYCMQ-----AIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 E F D+ +Q + K GFV TPIQA P+ L G+D+ G A+TG+GKTL+++ Sbjct: 8 EHKFADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTAT 67 Query: 276 LVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 H+ P E P +I+APTRELA+QI +A + + ++ YGG Q Sbjct: 68 FNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQ 127 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 + L+ GV+I+I T GR+ID + NL + +VLDEADRM D+GF Sbjct: 128 LAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGF 175
>RRP3_YARLI (Q6CH58) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 480 Score = 114 bits (285), Expect = 2e-25 Identities = 68/164 (41%), Positives = 93/164 (56%), Gaps = 1/164 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + D + + F +PTPIQAQ P AL+GRD+IG+A+TGSGKT ++ +P L Sbjct: 66 FKDLGVIDSICETCEELKFTKPTPIQAQSIPYALEGRDIIGLAQTGSGKTAAFAIPVL-- 123 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 Q E ++LAPTRELA QI GS R+ + GG Q L Sbjct: 124 ---QSLYENPQPLYCVVLAPTRELAYQISETFEALGSAMGLRTAVVVGGMNMMTQAVALS 180 Query: 465 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 593 + +++ATPGRL+D LE +LR + +LV+DEADR+LDM F Sbjct: 181 KKPHVIVATPGRLVDHLENTKGFSLRTLKFLVMDEADRLLDMEF 224
>HAS1_DEBHA (Q6BH93) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 568 Score = 113 bits (283), Expect = 4e-25 Identities = 65/165 (39%), Positives = 103/165 (62%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F EA + ++AI GF + T +QA+ P L GRDV+G A+TGSGKTL++++P + Sbjct: 106 FEEAGLSEPTLKAIKDMGFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPA-IE 164 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + R + +G V++++PTRELA+QI A + ++ + GGA + + L Sbjct: 165 MLYSLRFKPRNGTGVVVVSPTRELALQIFGVARELMAHHSQTFGIVIGGANRRQEAEKLM 224 Query: 465 RGVEIVIATPGRLIDMLEAGHTNL-RRVTYLVLDEADRMLDMGFE 596 +GV ++IATPGRL+D L+ + + V LV+DEADR+L++GFE Sbjct: 225 KGVNLLIATPGRLLDHLQNTQGFVFKNVKALVIDEADRILEIGFE 269
>HAS1_CANGA (Q6FIL3) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 494 Score = 113 bits (283), Expect = 4e-25 Identities = 64/165 (38%), Positives = 100/165 (60%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F N M+AI K GF + TP+QA+ P + GRDV+G A+TGSGKTL+++LP + Sbjct: 31 FKSLNLSQPTMRAIEKMGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLP-TIE 89 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + + + +G V+I+ PTRELA+QI + + + GGA + + L Sbjct: 90 LLHSLKFKPRNGTGVIIITPTRELALQIFGVVRELMEFHSQTFGIVIGGANRRQEAEKLM 149 Query: 465 RGVEIVIATPGRLIDMLEAGHTNL-RRVTYLVLDEADRMLDMGFE 596 +GV +++ATPGRL+D L+ + + + LV+DEADR+L++GFE Sbjct: 150 KGVNLLVATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFE 194
>SRMB_HAEIN (P44701) ATP-dependent RNA helicase srmB homolog (EC 3.6.1.-)| Length = 439 Score = 113 bits (283), Expect = 4e-25 Identities = 60/163 (36%), Positives = 93/163 (57%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + + ++A+ K G+ PT IQ + P A++ DV+G A TG+GKT +++LP L H Sbjct: 6 FEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQH 65 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + PR + G P +L+L PTRELA+Q+ +A + ++ I GG Sbjct: 66 LLDYPRRKPGP-PRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDVFN 124 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++V+ATPGRL+ ++ + + R V L+ DEADRML MGF Sbjct: 125 TNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGF 167
>RHLB_VIBVU (Q8DDN6) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 435 Score = 113 bits (282), Expect = 5e-25 Identities = 62/155 (40%), Positives = 92/155 (59%), Gaps = 2/155 (1%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE-- 308 ++ + K GF TPIQA P+ L G+D+ G A+TG+GKTL+++ H+ P E Sbjct: 21 VEGLEKKGFEFCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAHEGR 80 Query: 309 QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 488 Q P +I+APTRELA+QI +A + + ++ YGG Q+ L+ GV+++I Sbjct: 81 QPTQPRAIIMAPTRELAIQIYNDAEPLIASTGIKAALAYGGESYDKQLTKLQGGVDVLIG 140 Query: 489 TPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 T GR+ID + NL + +VLDEADRM D+GF Sbjct: 141 TTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGF 175
>DBPA_BACSU (P42305) ATP-dependent RNA helicase dbpA (EC 3.6.1.-)| Length = 479 Score = 113 bits (282), Expect = 5e-25 Identities = 61/153 (39%), Positives = 96/153 (62%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++A+ G+ EPT +Q P AL+ +D++ ++TGSGKT S+ +P L + Sbjct: 14 LRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIP-LCELANWDE---- 68 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 + P LIL PTRELAVQ++ + T G + R ++T ++G + Q +L++ IV+ TP Sbjct: 69 NKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTP 128 Query: 495 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 GR++D +E G L R++YLV+DEAD ML+MGF Sbjct: 129 GRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGF 161
>RHLB_VIBPA (Q87KH5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 437 Score = 112 bits (281), Expect = 6e-25 Identities = 63/154 (40%), Positives = 91/154 (59%), Gaps = 2/154 (1%) Frame = +3 Query: 138 QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE--Q 311 + + K GF TPIQA P+ L G+D+ G A+TG+GKTL+++ H+ P E Q Sbjct: 22 EGLEKKGFEYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNHLLTTPEHEGRQ 81 Query: 312 GDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIAT 491 P +I+APTRELA+QI +A + + ++ YGG Q+ L+ GV+I+I T Sbjct: 82 PTQPRAIIMAPTRELAIQIFNDAEPLIASTGLKAALAYGGESYDKQLAKLQDGVDILIGT 141 Query: 492 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 GR+ID + NL + +VLDEADRM D+GF Sbjct: 142 TGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGF 175
>RRP3_USTMA (Q4P3U9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 551 Score = 112 bits (281), Expect = 6e-25 Identities = 68/154 (44%), Positives = 89/154 (57%), Gaps = 1/154 (0%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++A GF PTPIQ + P AL+ RDVIG+A+TGSGKT ++ +P L + P+ Sbjct: 116 VEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQALWDNPK---- 171 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 +LAPTRELA QI + GS RS I GG Q L + +++ATP Sbjct: 172 -PFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATP 230 Query: 495 GRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 593 GRL D LE +LR + YLV+DEADR+LDM F Sbjct: 231 GRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDF 264
>RHLB_PSEPK (Q88NB7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 398 Score = 112 bits (281), Expect = 6e-25 Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 3/166 (1%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 FH+ + M AI GF TPIQAQ L+G+D IG A+TG+GKT ++++ + Sbjct: 11 FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 70 Query: 285 VGAQPRLEQG--DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRD 458 + P ++ P LI+APTREL VQI +A Y+ GG Q++ Sbjct: 71 LQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQLKA 130 Query: 459 LR-RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 L R +I++ATPGRL+D + G +L V +VLDEADRMLDMGF Sbjct: 131 LEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGF 176
>DDX21_MOUSE (Q9JIK5) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 851 Score = 112 bits (281), Expect = 6e-25 Identities = 63/143 (44%), Positives = 92/143 (64%), Gaps = 3/143 (2%) Frame = +3 Query: 174 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHV--GAQPRLEQGDGPIVLILAPT 347 PIQA+ + G+D+I A TG+GKT S+ +P + + G Q R ++G P VL+LAPT Sbjct: 283 PIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQER-KRGRAPQVLVLAPT 341 Query: 348 RELAVQIQAEATKFGSYSRTRST-CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAG 524 RELA Q+ + F ++ S C YGG P G QI +R G++I++ TPGR+ D L+ G Sbjct: 342 RELANQVSKD---FSDITKKLSVACFYGGTPYGGQIERMRSGIDILVGTPGRIKDHLQNG 398 Query: 525 HTNLRRVTYLVLDEADRMLDMGF 593 +L ++ ++VLDE D+MLDMGF Sbjct: 399 KLDLTKLKHVVLDEVDQMLDMGF 421
>HAS1_KLULA (Q6CXB7) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 497 Score = 112 bits (280), Expect = 8e-25 Identities = 63/165 (38%), Positives = 101/165 (61%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + D M+AI K GF + T +Q + P L G+DV+G A+TGSGKTL++++P + Sbjct: 36 FSDLKLSDGTMKAIGKMGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEM 95 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + + + + +G V+++ PTRELA+QI A + + + GGA + + L Sbjct: 96 LHSL-KFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEADKLM 154 Query: 465 RGVEIVIATPGRLIDMLEAGHTNL-RRVTYLVLDEADRMLDMGFE 596 +GV I+IATPGRL+D L+ + + + LV+DEADR+L++GFE Sbjct: 155 KGVNILIATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFE 199
>HAS1_ASPFU (Q4WQM4) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 622 Score = 112 bits (280), Expect = 8e-25 Identities = 66/165 (40%), Positives = 100/165 (60%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E + ++AI GF T IQ + P L GRDV+G A+TGSGKTLS+++P + Sbjct: 142 FTELGLSEKTLKAINDMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEM 201 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + A R + +G V++++PTRELA+QI A + Y + GGA + + L Sbjct: 202 LSAL-RFKPRNGTGVIVVSPTRELALQIFGVARELCQYHSQTYGIVIGGANRRAEAEKLM 260 Query: 465 RGVEIVIATPGRLIDMLEAGHTNL-RRVTYLVLDEADRMLDMGFE 596 +GV ++IATPGRL+D L+ + + + LV+DEADR+L++GFE Sbjct: 261 KGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFE 305
>RRP3_SCHPO (Q9P6N8) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 112 bits (279), Expect = 1e-24 Identities = 67/164 (40%), Positives = 90/164 (54%), Gaps = 1/164 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E D +A K GF PTPIQ + P+ L RDVIG+A+TGSGKT ++ LP + Sbjct: 48 FKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQE 107 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + P ++LAPTRELA QI + G RS I GG Q L Sbjct: 108 LWNNP-----SPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALS 162 Query: 465 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 593 + +++ TPGRL+D LE +L+ + YL++DEADR+LDM F Sbjct: 163 KKPHVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDF 206
>H669_METJA (Q58083) Probable ATP-dependent RNA helicase MJ0669 (EC 3.6.1.-)| Length = 367 Score = 112 bits (279), Expect = 1e-24 Identities = 65/164 (39%), Positives = 93/164 (56%), Gaps = 1/164 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGR-DVIGIAETGSGKTLSYILPGLV 281 F+E N D + AI GF +PT IQ + P+ L +++ A TGSGKT S+ +P L+ Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIP-LI 66 Query: 282 HVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL 461 + + + +G +IL PTRELA+Q+ E + IYGG PQI+ L Sbjct: 67 EL-----VNENNGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKAL 121 Query: 462 RRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 + IV+ TPGR++D + G NL+ V Y +LDEAD ML+MGF Sbjct: 122 KNA-NIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGF 164
>RHLB_MANSM (Q65RG7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 417 Score = 112 bits (279), Expect = 1e-24 Identities = 60/153 (39%), Positives = 93/153 (60%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++A+ +GF TPIQA P++L G+DV G A+TG+GKT++++ H+ P + Sbjct: 21 LEALESNGFEYCTPIQALSLPISLAGKDVAGQAQTGTGKTMAFLTATFHHLLEHP--VKT 78 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 + P LI+APTRELAVQI +A + + ++ YGG Q++ + G +I+I T Sbjct: 79 NHPRALIMAPTRELAVQIAHDAERMVKTTGLKTALAYGGDGYDKQLKAIEAGADIIIGTT 138 Query: 495 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 GR+ID ++ L + +VLDEADRM D+GF Sbjct: 139 GRIIDYVKQNIIALSHIQVVVLDEADRMFDLGF 171
>PRP28_YEAST (P23394) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) (Helicase CA8) Length = 588 Score = 112 bits (279), Expect = 1e-24 Identities = 77/190 (40%), Positives = 100/190 (52%), Gaps = 15/190 (7%) Frame = +3 Query: 72 RAGXVPKPIRFFHEANF--PDYCMQAIAKSGFVEPTPIQAQGWPMAL---KGRDVIGIAE 236 + G V P+R + E N D I + F PTPIQ P + RD +G+A Sbjct: 163 KGGTVENPLRNWEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLGVAS 222 Query: 237 TGSGKTLSYILPGLVHVGAQP----RLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSR 404 TGSGKTL++++P L+ + P L+ DGP LILAPTREL QIQ E K Sbjct: 223 TGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQKETQKVTKIWS 282 Query: 405 TRST------CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDE 566 S I GG L G +I++ATPGRLID LE +++V LVLDE Sbjct: 283 KESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQVETLVLDE 342 Query: 567 ADRMLDMGFE 596 AD+M+D+GFE Sbjct: 343 ADKMIDLGFE 352
>DDX21_HUMAN (Q9NR30) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 783 Score = 111 bits (278), Expect = 1e-24 Identities = 65/165 (39%), Positives = 100/165 (60%), Gaps = 5/165 (3%) Frame = +3 Query: 114 ANFP--DYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGL--V 281 +NFP + ++ + G PIQA+ + G+D+I A TG+GKT S+ +P + + Sbjct: 189 SNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKL 248 Query: 282 HVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRST-CIYGGAPKGPQIRD 458 H Q R ++G P VL+LAPTRELA Q+ + F ++ S C YGG P G Q Sbjct: 249 HGELQDR-KRGRAPQVLVLAPTRELANQVSKD---FSDITKKLSVACFYGGTPYGGQFER 304 Query: 459 LRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 +R G++I++ TPGR+ D ++ G +L ++ ++VLDE D+MLDMGF Sbjct: 305 MRNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQMLDMGF 349
>RHLB_IDILO (Q5QYF8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 425 Score = 110 bits (275), Expect = 3e-24 Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 6/167 (3%) Frame = +3 Query: 111 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 E F D + QAI+ +GF TPIQA P+AL RDV G A+TG+GKTL+++L Sbjct: 8 ETRFADLALHPKIQQAISSAGFEYCTPIQALSLPVALSNRDVAGQAQTGTGKTLAFLLAT 67 Query: 276 LVHVGAQPRLEQGD-GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQI 452 + E+ + GP LI+APTRELA+QI +A + + IYGG Q Sbjct: 68 FNRLMQNESSEKTESGPRALIMAPTRELAIQIAHDADALIEHCGLKMGVIYGGEGYEGQK 127 Query: 453 RDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 L +I++ T GRLID + +L+ + +VLDEADRM D+GF Sbjct: 128 EQLAAQPDILVGTTGRLIDFYKQDLFSLKDIEVVVLDEADRMFDLGF 174
>GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-) (Germline| helicase 1) Length = 763 Score = 110 bits (275), Expect = 3e-24 Identities = 65/173 (37%), Positives = 93/173 (53%), Gaps = 5/173 (2%) Frame = +3 Query: 90 KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYIL 269 KP + F EAN + + +A +G+ + TPIQ P+ +G D++ A+TGSGKT +++L Sbjct: 338 KPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLL 397 Query: 270 PGLVHVGAQPRL----EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAP 437 P + + L E G P +IL PTRELA QI E KF + +YGG Sbjct: 398 PIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLA 457 Query: 438 KGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD-MGF 593 G + +G I++ T GR+ E G L + + VLDEADRM+D MGF Sbjct: 458 VGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGF 510
>DBP4_YEAST (P20448) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-) (DEAD box| protein 4) (Helicase CA4) (Helicase UF1) Length = 770 Score = 110 bits (275), Expect = 3e-24 Identities = 64/167 (38%), Positives = 103/167 (61%), Gaps = 1/167 (0%) Frame = +3 Query: 99 RFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGL 278 +FF + D ++ + +S F++ T IQA P++L+G DV+ A+TGSGKTL++++P + Sbjct: 41 KFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVP-V 99 Query: 279 VHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRD 458 + + + + DG LI++PTRELA+QI TK GS++ + + GG ++ Sbjct: 100 IEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDVKFELER 159 Query: 459 LRRGVEIVIATPGRLIDML-EAGHTNLRRVTYLVLDEADRMLDMGFE 596 + R + I+I TPGR++ L +A N + LVLDEADR LDMGF+ Sbjct: 160 ISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFK 205
>RHLB_VIBVY (Q7MGP7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 435 Score = 110 bits (274), Expect = 4e-24 Identities = 63/160 (39%), Positives = 92/160 (57%), Gaps = 7/160 (4%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI-------LPGLVHVGA 293 ++ + K GF TPIQA P+ L G+D+ G A+TG+GKTL+++ L H G Sbjct: 21 VEGLEKKGFEFCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTHAHEGR 80 Query: 294 QPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGV 473 QP P +I+APTRELA+QI +A + + ++ YGG Q+ L+ GV Sbjct: 81 QPTQ-----PRAIIMAPTRELAIQIYNDAEPLIASTGIKAALAYGGESYDKQLAKLQGGV 135 Query: 474 EIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 +++I T GR+ID + NL + +VLDEADRM D+GF Sbjct: 136 DVLIGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGF 175
>DDX49_MOUSE (Q4FZF3) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 480 Score = 110 bits (274), Expect = 4e-24 Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 1/163 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E + ++ + G +PTP+Q P L+GRD +G A+TGSGKT +++LP L Sbjct: 4 FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + P G L+L PTRELA QI + G + I GG Q +L Sbjct: 64 LSEDPY-----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELS 118 Query: 465 RGVEIVIATPGRLIDMLEAGHT-NLRRVTYLVLDEADRMLDMG 590 R +VIATPGRL D L + +T N++++ +LV+DEADR+L+ G Sbjct: 119 RKPHVVIATPGRLADHLRSSNTFNMKKIQFLVMDEADRLLEQG 161
>HAS1_YEAST (Q03532) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-) (Helicase| associated with SET1 protein 1) Length = 505 Score = 109 bits (273), Expect = 5e-24 Identities = 61/165 (36%), Positives = 98/165 (59%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E ++AI K GF T +QA+ P L GRDV+G A+TGSGKTL++++P + Sbjct: 44 FEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPA-IE 102 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + + + +G ++++ PTRELA+QI A + + + GGA + + L Sbjct: 103 LLHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLM 162 Query: 465 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 596 +GV ++IATPGRL+D L+ + + L++DEADR+L++GFE Sbjct: 163 KGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFE 207
>DDX54_MOUSE (Q8K4L0) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) Length = 874 Score = 109 bits (272), Expect = 7e-24 Identities = 60/152 (39%), Positives = 87/152 (57%) Frame = +3 Query: 138 QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD 317 + I K G+ PTPIQ + P+ L G+DV+ +A TGSGKT ++LP + A+ Sbjct: 108 KGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLKAR---SAQT 164 Query: 318 GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 497 G LIL+PTRELA+Q + G ++ ++ I GG Q L +I+IATPG Sbjct: 165 GARALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPG 224 Query: 498 RLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 RL+ + + L+ V Y+V DEADR+ +MGF Sbjct: 225 RLVHVAVEMNLKLQSVEYVVFDEADRLFEMGF 256
>GLH3_CAEEL (O01836) ATP-dependent RNA helicase glh-3 (EC 3.6.1.-) (Germline| helicase 3) Length = 720 Score = 109 bits (272), Expect = 7e-24 Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 5/173 (2%) Frame = +3 Query: 90 KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYIL 269 +P + F +++ P + + ++G+ TPIQ P+ G+D++ A+TGSGKT +++L Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354 Query: 270 PGLVHVGAQPRL----EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAP 437 P + + + L E G P +IL PTRELA QI E KF S +YGG Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGIN 414 Query: 438 KGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD-MGF 593 G + +G I++ T GR+ E G L + YLVLDEADRM+D MGF Sbjct: 415 VGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGF 467
>HAS1_EMENI (Q5BBY1) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 609 Score = 108 bits (271), Expect = 9e-24 Identities = 64/165 (38%), Positives = 99/165 (60%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E + +Q I + GF T IQ + P L GRDV+G A+TGSGKTL++++P + Sbjct: 130 FTELGLSEKTLQGIKEMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 189 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + A R + +G V++++PTRELA+QI A + + + GGA + + L Sbjct: 190 LSAL-RFKPRNGTGVIVVSPTRELALQIFGVARELLTAHSQTYGIVIGGANRRAEAEKLT 248 Query: 465 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 596 +GV ++IATPGRL+D L+ + + LV+DEADR+L++GFE Sbjct: 249 KGVNLLIATPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVGFE 293
>HAS1_SCHPO (Q09916) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 578 Score = 108 bits (271), Expect = 9e-24 Identities = 65/168 (38%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +3 Query: 96 IRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 I F + + +AI + GF T IQ + P L GRDV+G A+TGSGKTL++++P Sbjct: 88 IEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPT 147 Query: 276 LVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIR 455 + + A + + +G V+I++PTRELA+QI A + Y + GGA + + Sbjct: 148 IEMLYAL-KFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGGANRRAEAD 206 Query: 456 DLRRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 596 L +GV +++ATPGRL+D L+ R + LV+DEADR+L++GFE Sbjct: 207 KLVKGVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFE 254
>YN21_CAEEL (P34580) Putative ATP-dependent RNA helicase T26G10.1 in chromosome| III (EC 3.6.1.-) Length = 489 Score = 108 bits (271), Expect = 9e-24 Identities = 67/165 (40%), Positives = 92/165 (55%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E A + G+++P+ IQ P AL+G+DVIG+AETGSGKT ++ +P L Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL-- 103 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 Q L+ L+L PTRELA QI + GS + I GG Q L Sbjct: 104 ---QSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALA 160 Query: 465 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 596 R I++ATPGRL+D LE NL+ + +L++DEADR+L+M FE Sbjct: 161 RRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFE 205
>DBP10_SCHPO (Q09719) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 848 Score = 108 bits (270), Expect = 1e-23 Identities = 61/153 (39%), Positives = 86/153 (56%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++AI K GF PTPIQ + P+ L+GRDV+G+A TGSGKT ++++P + H+ + Sbjct: 81 LRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLA---N 137 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 LIL+P RELA+Q F + RS I GG Q L +IV+ATP Sbjct: 138 SNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKPDIVVATP 197 Query: 495 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 GR + + L + Y+V DEADR+ +MGF Sbjct: 198 GRFLHLKVEMKLELSSIEYVVFDEADRLFEMGF 230
>DBP10_DEBHA (Q6BL34) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 932 Score = 108 bits (269), Expect = 2e-23 Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 1/164 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F F + + I+K GF +PTPIQ + P+ ++ RDV+G+A TGSGKT ++ LP + Sbjct: 99 FPSFGFSKFLLTNISKKGFKQPTPIQRKTIPLIMENRDVVGMARTGSGKTAAFTLPLVEK 158 Query: 285 VGAQ-PRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL 461 + + PR+ G +IL+P+RELA Q + +F + RS + GG Q + Sbjct: 159 LKSHSPRV----GVRAIILSPSRELASQTFKQVKEFSKGTDLRSIVLIGGDSLEEQFSSM 214 Query: 462 RRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++++ATPGR + + L+ V Y+V DEADR+ +MGF Sbjct: 215 MTNPDVIVATPGRFLHLKVEMELELKTVEYIVFDEADRLFEMGF 258
>HAS1_ASPOR (Q2UUN6) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 596 Score = 108 bits (269), Expect = 2e-23 Identities = 61/165 (36%), Positives = 99/165 (60%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E + M+ I GF T +Q + P L GRDV+G A+TGSGKTLS+++P + Sbjct: 121 FTELGLSEKTMKGIEGMGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEM 180 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + A R + +G +I++PTRELA+QI + + ++ + GGA + + L Sbjct: 181 LSAL-RFKPRNGTGAIIVSPTRELALQIFGQVRELLAHHSQTYGIVIGGANRRAEAEKLM 239 Query: 465 RGVEIVIATPGRLIDMLEAGHTNL-RRVTYLVLDEADRMLDMGFE 596 +GV +++ATPGRL+D L+ + + + L++DEADR+L++GFE Sbjct: 240 KGVNLLVATPGRLLDHLQNTQGFVFKNLRTLIIDEADRILEVGFE 284
>DRS1_ASPOR (Q2UQI6) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 820 Score = 108 bits (269), Expect = 2e-23 Identities = 67/164 (40%), Positives = 94/164 (57%), Gaps = 1/164 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E N ++ +A F PTPIQ + P+AL G+D++G A TGSGKT ++++P L Sbjct: 304 FQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILER 363 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + +PR + V IL PTRELAVQ ATK +Y+ + GG Q L+ Sbjct: 364 LLFRPR--KVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENILK 421 Query: 465 RGVEIVIATPGRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGF 593 + +++IATPGR ID M + + + LVLDEADRML+ GF Sbjct: 422 KRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGF 465
>DRS1_SCHPO (Q09903) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 754 Score = 108 bits (269), Expect = 2e-23 Identities = 66/164 (40%), Positives = 96/164 (58%), Gaps = 1/164 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F N ++ ++ GF PT IQ + P+AL G+D++G A TGSGKT ++I+P L Sbjct: 261 FQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILER 320 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + +P+ + VLIL PTRELA+Q + ATK S++ GG Q ++LR Sbjct: 321 LLYRPK--KVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELR 378 Query: 465 RGVEIVIATPGRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGF 593 + +IVIATPGR ID M + + + +V+DEADRML+ GF Sbjct: 379 KRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGF 422
>DDX49_HUMAN (Q9Y6V7) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 483 Score = 108 bits (269), Expect = 2e-23 Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 1/163 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E + ++ + G +PTP+Q P L+GRD +G A+TGSGKT +++LP L Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + P G L+L PTRELA QI + G + I GG Q +L Sbjct: 64 LSEDPY-----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELS 118 Query: 465 RGVEIVIATPGRLIDMLEAGHT-NLRRVTYLVLDEADRMLDMG 590 R +VIATPGRL D L + +T +++++ +LV+DEADR+L+ G Sbjct: 119 RKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQG 161
>DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 808 Score = 107 bits (268), Expect = 2e-23 Identities = 69/166 (41%), Positives = 91/166 (54%), Gaps = 3/166 (1%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F N ++A+ F PTPIQA+ P+AL GRD++G A TGSGKT ++++P L Sbjct: 224 FTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILER 283 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYS--RTRSTCIYGGAPKGPQIRD 458 + + R + G VL+L PTRELAVQ +A R + GG Q Sbjct: 284 LCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSLNAQAHT 343 Query: 459 LRRGVEIVIATPGRLIDML-EAGHTNLRRVTYLVLDEADRMLDMGF 593 LR +I+IATPGRLID L L + LV+DEADRML+ GF Sbjct: 344 LRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGF 389
>DBP8_YARLI (Q6C799) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 442 Score = 107 bits (268), Expect = 2e-23 Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 4/167 (2%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + P++ ++++ +P+ IQ P +KG+D IG A TGSGKT+++ P L Sbjct: 3 FTDLGLPEWLNESLSNMAITKPSAIQKACIPQIMKGKDCIGGARTGSGKTIAFAAPMLAE 62 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 P G L+L PTRELA+QI + T G+ R IYGG Q +L+ Sbjct: 63 WSKDPC-----GIFGLVLTPTRELAIQIAEQFTALGANMNIRVALIYGGVDMVKQSLELQ 117 Query: 465 RGVEIVIATPGRLIDMLEAGHTN----LRRVTYLVLDEADRMLDMGF 593 + VIATPGRL D + + + RRV Y+V+DEADR+L GF Sbjct: 118 KMPHFVIATPGRLADHIRSSGEDTIRGFRRVRYVVMDEADRLLTPGF 164
>DDX50_HUMAN (Q9BQ39) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 737 Score = 107 bits (267), Expect = 3e-23 Identities = 62/164 (37%), Positives = 98/164 (59%), Gaps = 4/164 (2%) Frame = +3 Query: 114 ANFP--DYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHV 287 +NFP + ++ + G PIQ + + +G+D+I A TG+GKT S+ +P + + Sbjct: 140 SNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 199 Query: 288 GA-QPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRST-CIYGGAPKGPQIRDL 461 Q +++ P VL+LAPTRELA Q+ A F +R S C YGG QI + Sbjct: 200 QRNQETIKKSRSPKVLVLAPTRELANQV---AKDFKDITRKLSVACFYGGTSYQSQINHI 256 Query: 462 RRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 R G++I++ TPGR+ D L++G +L ++ ++VLDE D+MLD+GF Sbjct: 257 RNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGF 300
>MAK5_CRYNE (Q5KC99) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 772 Score = 107 bits (266), Expect = 3e-23 Identities = 68/164 (41%), Positives = 97/164 (59%), Gaps = 18/164 (10%) Frame = +3 Query: 153 SGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG-DGPI- 326 S F PT IQ++ P + GRDV+G+AETGSGKTL+Y LP L ++ Q + + G P+ Sbjct: 190 SSFTAPTAIQSRAIPAGITGRDVVGVAETGSGKTLAYSLPILHYLLGQRKSKAGIKRPLS 249 Query: 327 VLILAPTRELAVQI---------QAEATKFGSY----SRTRSTCIYGGAPKGPQIRDLRR 467 L+L PTRELA+Q+ A AT G R + GG Q R L R Sbjct: 250 ALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQKRILER 309 Query: 468 GVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMG 590 G ++++ATPGRL D+++A T++R + +LV+DEADRM++ G Sbjct: 310 GCDVIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENG 353
>DDX50_MOUSE (Q99MJ9) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 734 Score = 106 bits (265), Expect = 4e-23 Identities = 58/142 (40%), Positives = 89/142 (62%), Gaps = 2/142 (1%) Frame = +3 Query: 174 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGA-QPRLEQGDGPIVLILAPTR 350 PIQ + + +G+D+I A TG+GKT S+ +P + + Q +++ P VL+LAPTR Sbjct: 159 PIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTR 218 Query: 351 ELAVQIQAEATKFGSYSRTRST-CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH 527 ELA Q+ A F +R S C YGG QI +R G++I++ TPGR+ D L++G Sbjct: 219 ELANQV---AKDFKDITRKLSVACFYGGTSYQSQINQIRNGIDILVGTPGRIKDHLQSGR 275 Query: 528 TNLRRVTYLVLDEADRMLDMGF 593 +L ++ ++VLDE D+MLD+GF Sbjct: 276 LDLSKLRHVVLDEVDQMLDLGF 297
>IF4A_CRYPV (O02494) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 405 Score = 106 bits (265), Expect = 4e-23 Identities = 61/167 (36%), Positives = 87/167 (52%) Frame = +3 Query: 96 IRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 + F N ++ I GF +P+ IQ +G L G D IG A++G+GKT ++++ Sbjct: 30 VECFEALNLEGDLLRGIFAYGFEKPSAIQQRGIKPILDGYDTIGQAQSGTGKTATFVIAA 89 Query: 276 LVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIR 455 L + Q VL+LAPTRELA QIQ A G Y R GG + Sbjct: 90 LQKIDYSLNACQ-----VLLLAPTRELAQQIQKVALALGDYCELRCHACVGGTSVRDDMN 144 Query: 456 DLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 L+ GV +V+ TPGR+ DML+ G+ + + +LDEAD ML GF+ Sbjct: 145 KLKSGVHMVVGTPGRVFDMLDKGYLRVDNLKLFILDEADEMLSRGFK 191
>YQFR_BACSU (P54475) Probable ATP-dependent RNA helicase yqfR (EC 3.6.1.-)| Length = 438 Score = 106 bits (264), Expect = 6e-23 Identities = 65/158 (41%), Positives = 90/158 (56%), Gaps = 3/158 (1%) Frame = +3 Query: 129 YCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE 308 + + A+ + GF EPT IQ + P LK VIG ++TG+GKT +Y+LP L + + Sbjct: 14 FIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVV 73 Query: 309 QGDGPIVLILAPTRELAVQIQAEATKFGSY---SRTRSTCIYGGAPKGPQIRDLRRGVEI 479 Q V+I APTRELA QI EA K S+ RS C GG K I L+ + Sbjct: 74 Q-----VVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQPHL 128 Query: 480 VIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 V+ TPGR+ D+++ ++ + LV+DEAD MLDMGF Sbjct: 129 VVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGF 166
>DDX27_HUMAN (Q96GQ7) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 796 Score = 106 bits (264), Expect = 6e-23 Identities = 65/165 (39%), Positives = 89/165 (53%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + N ++AI GF +PTPIQ P+ L G+D+ A TG+GKT ++ LP L Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + +PR Q VL+L PTREL +Q+ + + + + GG Q LR Sbjct: 280 LIYKPR--QAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALR 337 Query: 465 RGVEIVIATPGRLIDML-EAGHTNLRRVTYLVLDEADRMLDMGFE 596 +I+IATPGRLID L +L + L+LDEADRMLD FE Sbjct: 338 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 382
>DBP10_CANAL (Q5ANB2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 908 Score = 106 bits (264), Expect = 6e-23 Identities = 55/155 (35%), Positives = 91/155 (58%) Frame = +3 Query: 129 YCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE 308 + + IAK G+ +PTPIQ + P+ ++GRDV+G+A TGSGKT +++LP + + ++ Sbjct: 109 FILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLIERLKSR---- 164 Query: 309 QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 488 Q G +IL+P+RELA+Q + +F + +S + GG + +I++ Sbjct: 165 QPGGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDFSKMMTKPDIIVC 224 Query: 489 TPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 TPGR + + +L V Y+V DEADR+ +MGF Sbjct: 225 TPGRFLHLKVEMQYDLMTVQYIVFDEADRLFEMGF 259
>DBP10_CANGA (Q6FNA2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 969 Score = 105 bits (263), Expect = 8e-23 Identities = 56/151 (37%), Positives = 89/151 (58%) Frame = +3 Query: 144 IAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGP 323 I+K GF +PTPIQ + P+ L+ RD++G+A TGSGKT +++LP + + G Sbjct: 130 ISKRGFRQPTPIQRKTIPLILQNRDIVGMARTGSGKTAAFVLPMIEKLKTH---SSKIGA 186 Query: 324 IVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRL 503 +IL+P+RELA+Q + +F + RS + GG Q + +++IATPGR Sbjct: 187 RAIILSPSRELAMQTHSVFKEFSRGTHLRSVLLTGGDSLEDQFGMMMTNPDVIIATPGRF 246 Query: 504 IDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 + + + +L+ V Y V DEADR+ +MGF+ Sbjct: 247 LHLKVEMNLDLKSVEYAVFDEADRLFEMGFQ 277
>GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-) (Germline| helicase 2) Length = 974 Score = 105 bits (263), Expect = 8e-23 Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 5/173 (2%) Frame = +3 Query: 90 KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYIL 269 K + F EAN + + +A +G+ + TPIQ P+ +G D++ A+TGSGKT +++L Sbjct: 549 KTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLL 608 Query: 270 PGLVHVGAQPRL----EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAP 437 P + + + L E G P +IL PTREL QI E KF + +YGG Sbjct: 609 PIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLA 668 Query: 438 KGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD-MGF 593 G + +G I++ T GR+ E G L + + VLDEADRM+D MGF Sbjct: 669 VGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGF 721
>DRS1_ASPFU (Q4WRV2) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 830 Score = 105 bits (262), Expect = 1e-22 Identities = 66/166 (39%), Positives = 95/166 (57%), Gaps = 1/166 (0%) Frame = +3 Query: 99 RFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGL 278 R F + N ++ +A F PTPIQ + P+AL G+D++G A TGSGKT ++++P L Sbjct: 310 RSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPIL 369 Query: 279 VHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRD 458 + +PR + V IL PTRELAVQ ATK +++ + GG Q Sbjct: 370 ERLLFRPR--KVPTSRVAILMPTRELAVQCYNVATKLATHTDITFCQLVGGFSLREQENI 427 Query: 459 LRRGVEIVIATPGRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGF 593 L++ +++IATPGR ID M + + + LVLDEADRML+ GF Sbjct: 428 LKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGF 473
>DBP10_KLULA (Q6CIR0) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 973 Score = 105 bits (262), Expect = 1e-22 Identities = 58/151 (38%), Positives = 89/151 (58%) Frame = +3 Query: 144 IAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGP 323 I+K GF +PTPIQ + P+ L+ RD++G+A TGSGKT +++LP + + G Sbjct: 141 ISKKGFRQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFVLPMIEKLKTH---SAKIGV 197 Query: 324 IVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRL 503 +IL+P+RELA+Q +F S RS + GG Q + ++VIATPGR Sbjct: 198 RAVILSPSRELAIQTHRVFKEFSKGSDLRSILLTGGDSLEDQFGMMMGNPDVVIATPGRF 257 Query: 504 IDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 + + + +L+ V Y+V DEADR+ +MGF+ Sbjct: 258 LHLKVEMNLDLKSVEYVVFDEADRLFEMGFQ 288
>DDX54_HUMAN (Q8TDD1) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) (ATP-dependent RNA helicase DP97) Length = 881 Score = 105 bits (262), Expect = 1e-22 Identities = 59/152 (38%), Positives = 84/152 (55%) Frame = +3 Query: 138 QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD 317 + I K G+ PTPIQ + P+ L G+DV+ +A TGSGKT ++LP + Sbjct: 109 KGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLKTH---SAQT 165 Query: 318 GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 497 G LIL+PTRELA+Q + G ++ ++ I GG Q L +I+IATPG Sbjct: 166 GARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPG 225 Query: 498 RLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 RL+ + L+ V Y+V DEADR+ +MGF Sbjct: 226 RLVHVAVEMSLKLQSVEYVVFDEADRLFEMGF 257
>DBP10_NEUCR (Q7S9J4) ATP-dependent RNA helicase dbp-10 (EC 3.6.1.-)| Length = 934 Score = 105 bits (261), Expect = 1e-22 Identities = 56/156 (35%), Positives = 93/156 (59%), Gaps = 1/156 (0%) Frame = +3 Query: 129 YCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHV-GAQPRL 305 + ++AI + GF PTPIQ + P+ L+ +DV+G+A TGSGKT ++++P + + G PR+ Sbjct: 109 HLLRAITRKGFSVPTPIQRKAIPLILERKDVVGMARTGSGKTAAFVIPMIERLKGHSPRV 168 Query: 306 EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVI 485 G LI++P+RELA+Q + G + ++ + GG Q + +I+I Sbjct: 169 ----GSRALIMSPSRELALQTLKVVKELGRGTDLKTVLLVGGDSLEEQFGMMASNPDIII 224 Query: 486 ATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ATPGR + + + +L + Y+V DEADR+ +MGF Sbjct: 225 ATPGRFLHLKVEMNLSLASIKYVVFDEADRLFEMGF 260
>DDX27_MOUSE (Q921N6) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 760 Score = 104 bits (259), Expect = 2e-22 Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + N ++AI GF +PTPIQ P+ L G+D+ A TG+GKT ++ LP L Sbjct: 186 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 245 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + +PR Q VL+L PTREL +Q+ + + + + GG Q LR Sbjct: 246 LIYKPR--QAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALR 303 Query: 465 RGVEIVIATPGRLIDML-EAGHTNLRRVTYLVLDEADRMLDMGFE 596 +I+IATPGRLID L +L + L+LDEAD+MLD FE Sbjct: 304 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADKMLDEYFE 348
>DDX48_HUMAN (P38919) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) (Eukaryotic initiation factor 4A-like NUK-34) (Nuclear matrix protein 265) (hNMP 265) (Eukaryotic translation initiation factor 4A isoform 3) Length = 411 Score = 103 bits (258), Expect = 3e-22 Identities = 62/154 (40%), Positives = 83/154 (53%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++ I GF +P+ IQ + +KGRDVI +++G+GKT ++ + L + Q R Q Sbjct: 50 LRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQA 109 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 LILAPTRELAVQIQ G Y + GG G IR L G +V TP Sbjct: 110 -----LILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164 Query: 495 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GR+ DM+ R + LVLDEAD ML+ GF+ Sbjct: 165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFK 198
>DBP10_ASHGO (Q757U8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 960 Score = 103 bits (257), Expect = 4e-22 Identities = 55/151 (36%), Positives = 88/151 (58%) Frame = +3 Query: 144 IAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGP 323 I++ GF +PTPIQ + P+ L+ RD++G+A TGSGKT +++LP + + G Sbjct: 135 ISRKGFRQPTPIQRKTIPLILQQRDIVGMARTGSGKTAAFVLPLIEKLKMH---SAKIGA 191 Query: 324 IVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRL 503 +IL+P+RELA+Q +F S RS + GG Q + +++IATPGR Sbjct: 192 RAMILSPSRELAMQTHKVFKEFAKGSNLRSVLLTGGDGLEDQFSMMMSNPDVIIATPGRF 251 Query: 504 IDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 + + + +L + Y+V DEADR+ +MGF+ Sbjct: 252 LHLKVEMNLDLHSIEYVVFDEADRLFEMGFQ 282
>DDX48_MOUSE (Q91VC3) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 103 bits (257), Expect = 4e-22 Identities = 62/154 (40%), Positives = 83/154 (53%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++ I GF +P+ IQ + +KGRDVI +++G+GKT ++ + L + Q R Q Sbjct: 50 LRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQA 109 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 LILAPTRELAVQIQ G Y + GG G IR L G +V TP Sbjct: 110 -----LILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164 Query: 495 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GR+ DM+ R + LVLDEAD ML+ GF+ Sbjct: 165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFK 198
>HAS1_YARLI (Q6C7D2) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 605 Score = 103 bits (256), Expect = 5e-22 Identities = 56/155 (36%), Positives = 95/155 (61%), Gaps = 1/155 (0%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 MQ++ GF TP+Q + P L GRDV+G A+TGSGKTL++++P + + + + + Sbjct: 143 MQSLKDMGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPA-IEMLRKLKFKPR 201 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 +G V++++PTRELA+QI A + + GG + + L +GV +++ TP Sbjct: 202 NGTGVIVVSPTRELALQIYGVARDLMANHSQTLGIVIGGNNRRQEEEKLNKGVNLLVCTP 261 Query: 495 GRLIDMLEAGHTNL-RRVTYLVLDEADRMLDMGFE 596 GRL+D L+ + + + L++DEADR+L++GFE Sbjct: 262 GRLLDHLQNSQGFVFKNLKALIIDEADRILEIGFE 296
>DRS1_USTMA (Q4P9P3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 932 Score = 103 bits (256), Expect = 5e-22 Identities = 62/156 (39%), Positives = 92/156 (58%), Gaps = 3/156 (1%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVG--AQPRLE 308 ++A++ F +PTPIQ++ P+AL G+D++ A TGSGKT ++++P + + A+ R Sbjct: 345 LRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTIERLTWRAKTRTP 404 Query: 309 QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 488 VLILAPTRELA+Q + ++ R GG Q +L+ E+VIA Sbjct: 405 HEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGGLSVKSQEAELKLRPEVVIA 464 Query: 489 TPGRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGF 593 TPGRLID + + L + LV+DEADRML+ GF Sbjct: 465 TPGRLIDHVRNSASFTLDDIEILVMDEADRMLEDGF 500
>PIT_DROME (Q9VD51) Probable ATP-dependent RNA helicase pitchoune (EC 3.6.1.-)| Length = 680 Score = 103 bits (256), Expect = 5e-22 Identities = 57/155 (36%), Positives = 97/155 (62%), Gaps = 1/155 (0%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++AI + GF E T IQ++ LKGRD++G A+TGSGKTL++++P V + + R Sbjct: 199 LRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPA-VELINKLRFMPR 257 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 +G V+I++PTREL++Q + ++ + GG+ + + L +G+ I++ATP Sbjct: 258 NGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINILVATP 317 Query: 495 GRLIDMLEAGHTNL-RRVTYLVLDEADRMLDMGFE 596 GRL+D L+ L + + L++DE DR+L++GFE Sbjct: 318 GRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFE 352
>DBP9_ASPFU (Q4X0C2) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 649 Score = 103 bits (256), Expect = 5e-22 Identities = 62/170 (36%), Positives = 95/170 (55%), Gaps = 6/170 (3%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F N QA+ K F +PTP+Q++ P+AL+G+D++ A+TGSGKT +Y+LP L Sbjct: 59 FESLNLDPRLRQALIKEQFTKPTPVQSKAIPLALEGKDILARAKTGSGKTAAYVLPILQT 118 Query: 285 V----GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSY--SRTRSTCIYGGAPKGP 446 + A P L+ G LIL PTRELA Q+Q+ KF ++ RS + Sbjct: 119 ILQKKAADPSLKATTG---LILVPTRELAEQVQSVIIKFSAFCGKDVRSVNLTQKVSDAV 175 Query: 447 QIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 Q L +++++TP R+I L +L +T+LV+DEAD +L G++ Sbjct: 176 QRTMLADYPDLIVSTPARVIANLGTSALSLENLTHLVIDEADLVLSYGYD 225
>DBP10_YARLI (Q6C7X8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 926 Score = 103 bits (256), Expect = 5e-22 Identities = 56/153 (36%), Positives = 88/153 (57%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++ IA+ GF +PTPIQ + P+ L+G+DV+G+A TGSGKT +++LP L + Sbjct: 114 LKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLEKLKVH---SAK 170 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 G +IL+P+RELA+Q F + + R + GG Q + + +I+IATP Sbjct: 171 VGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEEQFKMMMSNPDIIIATP 230 Query: 495 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 GR + + +L V Y+ DEADR+ ++GF Sbjct: 231 GRFLHLKVEMELSLASVEYICFDEADRLFELGF 263
>DBP10_YEAST (Q12389) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-) (DEAD box| protein 10) Length = 995 Score = 103 bits (256), Expect = 5e-22 Identities = 60/170 (35%), Positives = 96/170 (56%), Gaps = 8/170 (4%) Frame = +3 Query: 111 EANFPDYCMQAIA-----KSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 275 + +FP + + I + GF +PTPIQ + P+ L+ RD++G+A TGSGKT ++ILP Sbjct: 136 KGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPM 195 Query: 276 LVHVGAQPRLEQGDGPI---VLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGP 446 + +L+ G I +IL+P+RELA+Q F + RS + GG Sbjct: 196 V------EKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEE 249 Query: 447 QIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 Q + +++IATPGR + + + +L+ V Y+V DEADR+ +MGF+ Sbjct: 250 QFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVEYVVFDEADRLFEMGFQ 299
>DDX31_HUMAN (Q9H8H2) Probable ATP-dependent RNA helicase DDX31 (EC 3.6.1.-)| (DEAD box protein 31) (Helicain) Length = 851 Score = 103 bits (256), Expect = 5e-22 Identities = 57/145 (39%), Positives = 93/145 (64%), Gaps = 3/145 (2%) Frame = +3 Query: 171 TPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGA-QPRLEQGDGPIVLILAPT 347 T +Q Q P+ L+GRD + ++TGSGKTL+Y +P + + A + ++++ DGP L+L PT Sbjct: 255 TSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPT 314 Query: 348 RELAVQIQAEATK-FGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEA- 521 RELA+Q K ++ + GG + + LR+G+ I+I+TPGRL+D +++ Sbjct: 315 RELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKST 374 Query: 522 GHTNLRRVTYLVLDEADRMLDMGFE 596 + + R+ +LV DEADR+LD+GFE Sbjct: 375 KNIHFSRLRWLVFDEADRILDLGFE 399
>HAS1_CRYNE (Q5KMN6) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 607 Score = 102 bits (255), Expect = 6e-22 Identities = 62/165 (37%), Positives = 96/165 (58%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F N AI + GF T +QA+ P L G+DV+G A TGSGKT+++++P V Sbjct: 131 FSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPS-VE 189 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + + R + +G V+I++PTRELA+QI A + + GGA + + L Sbjct: 190 LLSTLRFKPVNGTGVIIISPTRELALQIFGVAKELMQGHSQTFGVLMGGANRKAEADKLV 249 Query: 465 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 596 +GV +++ATPGRL+D L+ + + LV+DEADR+L++GFE Sbjct: 250 KGVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFE 294
>DBP4_KLULA (Q6CRF4) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 770 Score = 102 bits (255), Expect = 6e-22 Identities = 60/165 (36%), Positives = 99/165 (60%), Gaps = 1/165 (0%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + + ++ + ++ F++ T IQ + P++LKG DV+G A+TGSGKTL++++P ++ Sbjct: 43 FQDLPISEQTLKGLKEAAFIKLTEIQRESIPLSLKGHDVLGAAKTGSGKTLAFLIP-VIE 101 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + + DG LI++PTRELA+QI +K G ++ + + GG + + Sbjct: 102 KLYREKWTDMDGLGALIISPTRELAMQIYEVLSKIGKHTTFSAGLVIGGKDVTFEKERIS 161 Query: 465 RGVEIVIATPGRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 R + I+I TPGR++ M +A N + LVLDEADR LDMGF+ Sbjct: 162 R-INILIGTPGRILQHMDQAVGFNTSNLQLLVLDEADRCLDMGFK 205
>DBPA_ECOLI (P21693) ATP-independent RNA helicase dbpA (EC 3.6.1.-)| Length = 457 Score = 102 bits (255), Expect = 6e-22 Identities = 62/147 (42%), Positives = 84/147 (57%), Gaps = 1/147 (0%) Frame = +3 Query: 156 GFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLI 335 G++ TP+QA P L G+DV A+TGSGKT ++ L L + A Q L+ Sbjct: 22 GYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQA-----LV 76 Query: 336 LAPTRELAVQIQAEATKFGSY-SRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 512 L PTRELA Q+ E + + T+ + GG P G Q L+ I++ATPGRL+D Sbjct: 77 LCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDH 136 Query: 513 LEAGHTNLRRVTYLVLDEADRMLDMGF 593 L+ G +L + LV+DEADRMLDMGF Sbjct: 137 LQKGTVSLDALNTLVMDEADRMLDMGF 163
>DBP10_ASPOR (Q2UHC1) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 929 Score = 102 bits (255), Expect = 6e-22 Identities = 56/155 (36%), Positives = 90/155 (58%) Frame = +3 Query: 129 YCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE 308 + ++AI + GF PTPIQ + P+ + G+DV+G+A TGSGKT ++++P + + + Sbjct: 99 HLLKAITRKGFSVPTPIQRKTIPVIMDGQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKV 158 Query: 309 QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 488 G LIL+P+RELA+Q + G + +S + GG Q + +IVIA Sbjct: 159 GARG---LILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFSLMAGNPDIVIA 215 Query: 489 TPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 TPGR + + + +L + Y+V DEADR+ +MGF Sbjct: 216 TPGRFLHLKVEMNLDLSSIRYVVFDEADRLFEMGF 250
>HAS1_USTMA (Q4P6N0) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 517 Score = 102 bits (254), Expect = 8e-22 Identities = 60/157 (38%), Positives = 98/157 (62%), Gaps = 4/157 (2%) Frame = +3 Query: 138 QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD 317 +AI GF T +QA+ P + G+DV+G A+TGSGKTLS+++P + + + + + + Sbjct: 63 KAIDAMGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPA-IEMLHRLKFKPRN 121 Query: 318 GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 497 G +I++PTRELA+QI A + ++ I GGA + + L++GV +++ATPG Sbjct: 122 GTGAIIISPTRELALQIFGVAKELMAHHHQTFGIIMGGANRRAEADKLQKGVNLIVATPG 181 Query: 498 RLIDMLEAG----HTNLRRVTYLVLDEADRMLDMGFE 596 RL+D L+ +NL+ L +DEADR+L++GFE Sbjct: 182 RLLDHLQNTKGFVFSNLKA---LCIDEADRILEIGFE 215
>DBP9_EMENI (Q5AZA6) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 610 Score = 102 bits (254), Expect = 8e-22 Identities = 64/170 (37%), Positives = 93/170 (54%), Gaps = 6/170 (3%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F N QA+ K F +PTP+QA+ P+AL+G+D++ A+TGSGKT +Y+LP L Sbjct: 30 FETLNLDPRLRQALVKEKFSKPTPVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQT 89 Query: 285 V----GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSY--SRTRSTCIYGGAPKGP 446 + P ++ G LIL PTRELA Q+Q T F ++ RS + Sbjct: 90 ILQKKAIDPSMKATTG---LILVPTRELAEQVQKVITTFAAFCGKDVRSVNLTQKVSDAV 146 Query: 447 QIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 Q L +IV++TP R+I L +L +T+LV+DEAD +L G+E Sbjct: 147 QKAMLADYPDIVVSTPARVIANLGTSALSLENLTHLVIDEADLVLSYGYE 196
>DBP8_DEBHA (Q6BGU8) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 441 Score = 102 bits (254), Expect = 8e-22 Identities = 67/167 (40%), Positives = 87/167 (52%), Gaps = 4/167 (2%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E + +A+ PT IQ+ P LKG D IG A+TGSGKT+++ P L Sbjct: 3 FEELGVSKWLSEALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPMLTQ 62 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 P G L+L PTRELA+QI + GS + + I GG Q +L+ Sbjct: 63 WSEDP-----SGIYGLVLTPTRELALQIAEQFAALGSSMNIKVSVIVGGEDIVKQALELQ 117 Query: 465 RGVEIVIATPGRLID-MLEAGH---TNLRRVTYLVLDEADRMLDMGF 593 R V+ATPGRL D +L +G LRRV YL+LDEADR+L F Sbjct: 118 RRPHFVVATPGRLADHILNSGEDTVCGLRRVKYLILDEADRLLSNSF 164
>DBP4_CANAL (Q5AF95) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 765 Score = 102 bits (253), Expect = 1e-21 Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 2/166 (1%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + + ++ + ++ FV T IQ + P+ALKG D++G A TGSGKTL++++P ++ Sbjct: 50 FSDLPITENTLKGLKEATFVSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIP-VIE 108 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + ++ + DG LI++PTRELAVQI TK G Y+ + + GG K Q R Sbjct: 109 SLIRNKITEYDGLAALIVSPTRELAVQIFEVLTKIGKYNTFSAGLVTGG--KDVQFEKER 166 Query: 465 -RGVEIVIATPGRLIDML-EAGHTNLRRVTYLVLDEADRMLDMGFE 596 + I++ TPGR+ L EA + LVLDEADR LDMGF+ Sbjct: 167 VSRMNILVGTPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFK 212
>DDX48_MACFA (Q4R3Q1) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 102 bits (253), Expect = 1e-21 Identities = 61/154 (39%), Positives = 82/154 (53%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++ I GF +P+ IQ + +KGRDVI +++G+GKT ++ + L + Q R Q Sbjct: 50 LRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQA 109 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 LILAP RELAVQIQ G Y + GG G IR L G +V TP Sbjct: 110 -----LILAPARELAVQIQKGLLTLGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164 Query: 495 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GR+ DM+ R + LVLDEAD ML+ GF+ Sbjct: 165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFK 198
>DDX18_HUMAN (Q9NVP1) ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD box| protein 18) (Myc-regulated DEAD box protein) (MrDb) Length = 670 Score = 102 bits (253), Expect = 1e-21 Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 8/172 (4%) Frame = +3 Query: 105 FHEANFPDYC-------MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 F + +F C ++AI + GF T IQ + L+GRD++ A+TGSGKTL++ Sbjct: 174 FEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAF 233 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 ++P V + + R +G VLIL+PTRELA+Q + ++ I GG+ + Sbjct: 234 LIPA-VELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRS 292 Query: 444 PQIRDLRRGVEIVIATPGRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 + + L G+ I++ATPGRL+D M + + LV+DEADR+LD+GFE Sbjct: 293 AEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFE 344
>IF4A_CANAL (P87206) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 102 bits (253), Expect = 1e-21 Identities = 58/164 (35%), Positives = 86/164 (52%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + N ++ I G+ P+ IQ + +GRDV+ A++G+GKT ++ + L Sbjct: 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQR 84 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + + Q LILAPTRELA+QI+ T G Y + GG I R Sbjct: 85 INENEKATQA-----LILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDIEAFR 139 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GV+IV+ TPGR++DM+E + +V +LDEAD ML GF+ Sbjct: 140 SGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFK 183
>FAL1_EMENI (Q5AUL4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 399 Score = 101 bits (252), Expect = 1e-21 Identities = 57/163 (34%), Positives = 84/163 (51%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + + + ++ I G+ P+ +Q++ KGRD I A++G+GKT ++ + L Sbjct: 27 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISALQV 86 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + R Q L+L+PTRELA QIQ+ G Y + GG G IR L Sbjct: 87 IDTVVRETQA-----LVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLD 141 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 G +V TPGR+ DM+ H R + LVLDEAD +L+ GF Sbjct: 142 YGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGF 184
>DRS1_YARLI (Q6CEB8) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 753 Score = 101 bits (252), Expect = 1e-21 Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 2/166 (1%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F N M+ I+ G+ PTPIQ++ P+AL G+D++ A TGSGKT +YI+P L Sbjct: 254 FQTLNLSRPVMKGISALGYQAPTPIQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVLER 313 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSY-SRTRSTCIYGGAPKGPQIRDL 461 + + + V++L PTREL++Q+ K Y S R GG Q ++L Sbjct: 314 L--LYKSSKVAATKVVVLTPTRELSIQVADVGKKLAQYVSGVRFGLAVGGLNLRVQEQEL 371 Query: 462 RRGVEIVIATPGRLIDMLEAGHT-NLRRVTYLVLDEADRMLDMGFE 596 + E+VIATPGR ID + + N+ V LV+DEADRML+ GF+ Sbjct: 372 KTRPEVVIATPGRFIDHVRNSPSFNVDDVEILVIDEADRMLEEGFQ 417
>DBP10_EMENI (Q5BFU7) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 936 Score = 101 bits (252), Expect = 1e-21 Identities = 56/153 (36%), Positives = 90/153 (58%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++AIA+ GF PTPIQ + P+ ++ +DV+G+A TGSGKT ++++P + + + Sbjct: 103 LKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKFGA 162 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 G LIL+P+RELA+Q + G + +S + GG Q + +IVIATP Sbjct: 163 RG---LILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNPDIVIATP 219 Query: 495 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 GR + + + +L + Y+V DEADR+ +MGF Sbjct: 220 GRFLHLKVEMNLDLSSIKYVVFDEADRLFEMGF 252
>DBP4_CANGA (Q6FPT7) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 765 Score = 101 bits (252), Expect = 1e-21 Identities = 61/166 (36%), Positives = 98/166 (59%), Gaps = 1/166 (0%) Frame = +3 Query: 102 FFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLV 281 FF + ++ + ++ F++ T IQ +L+G DV G A+TGSGKTL++++P L Sbjct: 42 FFKDLPISKSTLKGLNEASFIKMTDIQRDSIVTSLQGHDVFGTAKTGSGKTLAFLVPVLE 101 Query: 282 HVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL 461 + + R + DG LI++PTRELA+QI K GS+++ + + GG ++ + Sbjct: 102 KL-YRERWTEFDGLGALIISPTRELAMQIYEVLVKIGSHTQFSAGLVIGGKDVNFELERI 160 Query: 462 RRGVEIVIATPGRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 + + I+I TPGR++ M +A N + LVLDEADR LDMGF+ Sbjct: 161 AK-INILIGTPGRILQHMDQAVGLNTSNLQMLVLDEADRCLDMGFQ 205
>FAL1_NEUCR (Q9P735) ATP-dependent RNA helicase fal-1 (EC 3.6.1.-)| Length = 400 Score = 101 bits (252), Expect = 1e-21 Identities = 58/163 (35%), Positives = 83/163 (50%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + + ++ I G+ P+ +Q++ KGRD I A++G+GKT ++ + L Sbjct: 28 FESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQV 87 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + R Q L+L+PTRELA QIQ+ G Y + GG G IR L Sbjct: 88 IDTAVRETQA-----LVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLD 142 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 G IV TPGR+ DM+ H R + LVLDEAD +L+ GF Sbjct: 143 YGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGF 185
>FAL1_GIBZE (Q4IAA0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 401 Score = 101 bits (252), Expect = 1e-21 Identities = 58/163 (35%), Positives = 83/163 (50%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + + ++ I G+ P+ +Q++ KGRD I A++G+GKT ++ + L Sbjct: 29 FESMSLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQV 88 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + R Q L+L+PTRELA QIQ+ G Y + GG G IR L Sbjct: 89 IDTAVRETQA-----LVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLD 143 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 G IV TPGR+ DM+ H R + LVLDEAD +L+ GF Sbjct: 144 YGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNKGF 186
>DBP4_ASHGO (Q75C76) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 763 Score = 101 bits (251), Expect = 2e-21 Identities = 60/155 (38%), Positives = 94/155 (60%), Gaps = 1/155 (0%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++ + ++ +++ T IQ P+ALKG DV+G A+TGSGKTL++++P L + R + Sbjct: 53 VKGLKEAAYIKMTDIQRAAIPVALKGHDVLGAAKTGSGKTLAFLVPVLEKL-YHERWTEL 111 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 DG L+++PTRELA+QI K G Y + + GG ++ + + + I+I TP Sbjct: 112 DGLGALVISPTRELAMQIYEVLVKIGKYMSFSAGLVIGGKDVKFEMERVSK-INILIGTP 170 Query: 495 GRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GRL+ M ++ N + LVLDEADR LDMGF+ Sbjct: 171 GRLLQHMDQSVGLNTSNLQILVLDEADRCLDMGFK 205
>RHLB_PHOPR (Q6LLL5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 437 Score = 101 bits (251), Expect = 2e-21 Identities = 57/155 (36%), Positives = 90/155 (58%), Gaps = 2/155 (1%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++ + GF TPIQA P+ L G+D+ G A+TG+GKTL+++ ++ P ++ Sbjct: 21 LEGLDAQGFHYCTPIQALALPVVLTGQDIAGQAQTGTGKTLAFLTATFNYLLLNPASDER 80 Query: 315 --DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 488 + P +I+APTRELA+QI +A + + ++ YGG Q + GV+I+I Sbjct: 81 KTNQPRAIIMAPTRELAIQIYNDAAPLLASTGLKAGLAYGGEAYEKQQKVFAEGVDILIG 140 Query: 489 TPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 T GR+ID + +L + +VLDEADRM D+GF Sbjct: 141 TCGRIIDFYKQRVIDLASIQVVVLDEADRMFDLGF 175
>DBP4_ASPOR (Q2UHB7) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 796 Score = 100 bits (250), Expect = 2e-21 Identities = 64/172 (37%), Positives = 99/172 (57%), Gaps = 1/172 (0%) Frame = +3 Query: 84 VPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 263 + + + F + + +A S F T IQ++ ALKGRD++G A+TGSGKTL++ Sbjct: 40 IKETYKSFSDLPLSEPTASGLASSHFKTLTDIQSRAIGHALKGRDILGAAKTGSGKTLAF 99 Query: 264 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 443 ++P L ++ + + + DG LIL+PTRELA+QI K G Y + I GG Sbjct: 100 LIPVLENL-YRKQWSEHDGLGALILSPTRELAIQIFEVLRKIGRYHTFSAGLIIGGKSLK 158 Query: 444 PQIRDLRRGVEIVIATPGRLIDML-EAGHTNLRRVTYLVLDEADRMLDMGFE 596 + L R + I++ TPGR++ L + ++ + LVLDEADR+LDMGF+ Sbjct: 159 EEQERLGR-MNILVCTPGRMLQHLDQTAMFDVFNLQMLVLDEADRILDMGFQ 209
>DBP10_ASPFU (Q8NJM2) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 869 Score = 100 bits (249), Expect = 3e-21 Identities = 54/153 (35%), Positives = 89/153 (58%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++AIA+ GF PTPIQ + P+ + +DV+G+A TGSGKT ++++P + + + Sbjct: 82 LKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKVGA 141 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 G L+L+P+RELA+Q + G + +S + GG Q + +I+IATP Sbjct: 142 RG---LVLSPSRELALQTLKVVKELGRGTDLKSVLLVGGDSLEEQFAMIAGNPDIIIATP 198 Query: 495 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 GR + + + +L + Y+V DEADR+ +MGF Sbjct: 199 GRFLHLKVEMNLDLSSIRYVVFDEADRLFEMGF 231
>FAL1_SCHPO (Q10055) ATP-dependent RNA helicase tif412 (EC 3.6.1.-)| Length = 394 Score = 100 bits (249), Expect = 3e-21 Identities = 59/164 (35%), Positives = 86/164 (52%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F E N + ++ I G+ P+ +Q++ KGRDVI A++G+GKT ++ + L Sbjct: 23 FEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGILQS 82 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + R Q LIL+PTRELAVQIQ G + + GG G I+ L Sbjct: 83 IDLSVRDTQA-----LILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGNDIKKLD 137 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 G +V TPGR+ DM+ + R V L+LDEAD +L+ GF+ Sbjct: 138 YGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFK 181
>FAL1_ASPOR (Q2UAK1) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 100 bits (249), Expect = 3e-21 Identities = 57/163 (34%), Positives = 84/163 (51%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + + + ++ I G+ P+ +Q++ KGRD I A++G+GKT ++ + L Sbjct: 26 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQV 85 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + R Q L+L+PTRELA QIQ+ G Y + GG G IR L Sbjct: 86 IDTVVRESQA-----LVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLD 140 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 G +V TPGR+ DM+ H R + LVLDEAD +L+ GF Sbjct: 141 YGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGF 183
>FAL1_USTMA (Q4P184) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 100 bits (249), Expect = 3e-21 Identities = 56/154 (36%), Positives = 84/154 (54%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++ I F +P+ IQ + ++GRDVI A++G+GKT ++ + L + R Q Sbjct: 36 LRGIYAYNFEKPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISMLQSIDTTLRETQA 95 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 L+L+PTRELA+QIQ+ G Y + GG G IR L G IV TP Sbjct: 96 -----LVLSPTRELAIQIQSVVLALGDYLNVQCHACIGGTSVGEDIRKLDYGQHIVSGTP 150 Query: 495 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GR+ DM+ H + + L+LDE+D +L+MGF+ Sbjct: 151 GRVYDMIRRRHLRTKNIKMLILDESDELLNMGFK 184
>FAL1_CANAL (Q5A9Z6) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 100 bits (248), Expect = 4e-21 Identities = 60/183 (32%), Positives = 94/183 (51%) Frame = +3 Query: 48 QLRXYHRGRAGXVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIG 227 +L H+ G K R F N ++ I GF P+ IQ++ + GRD I Sbjct: 11 ELEFSHKSTKGI--KVHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIA 68 Query: 228 IAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRT 407 A++G+GKT ++ + L + + + Q LIL+PTRELA+QIQ G Y Sbjct: 69 QAQSGTGKTATFSIGMLEVIDTKSKECQA-----LILSPTRELAIQIQNVVKHLGDYMNI 123 Query: 408 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDM 587 + GG G ++ L++G +IV TPGR+ID+++ + R + L+LDEAD + Sbjct: 124 HTHACIGGKNVGEDVKKLQQGQQIVSGTPGRVIDVIKRRNLQTRNIKVLILDEADELFTK 183 Query: 588 GFE 596 GF+ Sbjct: 184 GFK 186
>DDX18_MOUSE (Q8K363) ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD box| protein 18) Length = 660 Score = 100 bits (248), Expect = 4e-21 Identities = 58/155 (37%), Positives = 95/155 (61%), Gaps = 1/155 (0%) Frame = +3 Query: 135 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 314 ++AI + GF T IQ + L+GRD++ A+TGSGKTL++++P ++ + + + Sbjct: 181 LKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIP-VIELIVKLKFMPR 239 Query: 315 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 494 +G VLIL+PTRELA+Q + ++ I GG+ + +++ L G+ I++ATP Sbjct: 240 NGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNGINIIVATP 299 Query: 495 GRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 GRL+D M + + LV+DEADR+LD+GFE Sbjct: 300 GRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFE 334
>DHH1_CANAL (Q5AAW3) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 549 Score = 99.8 bits (247), Expect = 5e-21 Identities = 60/164 (36%), Positives = 88/164 (53%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + N + I ++GF +P+PIQ + PMAL GRD++ A+ G+GKT S+I+P L Sbjct: 32 FEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQL 91 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 V +P+L + LIL PTRELA+Q G + T+ GG I L Sbjct: 92 V--KPKLNKVQA---LILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLH 146 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 V I++ TPGR++D+ +L V+DEAD+ML F+ Sbjct: 147 DPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFK 190
>FAL1_ASPFU (Q4WEB4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 99.8 bits (247), Expect = 5e-21 Identities = 57/163 (34%), Positives = 84/163 (51%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + + + ++ I G+ P+ +Q++ KGRD I A++G+GKT ++ + L Sbjct: 26 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSIGILQV 85 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + R Q L+L+PTRELA QIQ+ G Y + GG G IR L Sbjct: 86 IDTVVRETQA-----LVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLD 140 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 593 G +V TPGR+ DM+ H R + LVLDEAD +L+ GF Sbjct: 141 YGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGF 183
>FAL1_YARLI (Q6C347) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 99.8 bits (247), Expect = 5e-21 Identities = 54/164 (32%), Positives = 87/164 (53%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F + D ++ I GF P+ IQ++ +KGRD I A++G+GKT ++ + L Sbjct: 26 FESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGTGKTATFSISMLEV 85 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 + + R Q ++L+PTRELA QIQ+ G Y + GG ++ L Sbjct: 86 IDTKHRETQA-----MVLSPTRELATQIQSVILALGDYMNVQCHACIGGTSLSVDMKKLE 140 Query: 465 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 G ++V TPGR +DM++ G + + L+LDEAD +L+ GF+ Sbjct: 141 AGQQVVSGTPGRCLDMIKKGCLRTKNLKMLILDEADELLNKGFQ 184
>DBP8_NEUCR (Q7RYZ7) ATP-dependent RNA helicase dbp-8 (EC 3.6.1.-)| Length = 626 Score = 99.8 bits (247), Expect = 5e-21 Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 4/163 (2%) Frame = +3 Query: 105 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 284 F N + +Q++A PT IQ P LKGRD IG + TGSGKT+++ +P L Sbjct: 197 FDALNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPILQQ 256 Query: 285 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 464 A P G +IL PTRELA+QI + ++ I GGA Q DL Sbjct: 257 WAANPSAIFG-----VILTPTRELALQIMEQVIALSQPHVLKAVLITGGADMRKQAIDLA 311 Query: 465 RGVEIVIATPGRLIDMLEAGHTN----LRRVTYLVLDEADRML 581 + +VIATPGRL D + + LRRV ++VLDEADR+L Sbjct: 312 KRPHLVIATPGRLADHIRTSGEDTICGLRRVKFIVLDEADRLL 354
>IF4A3_NICPL (P41380) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) Length = 391 Score = 99.4 bits (246), Expect = 7e-21 Identities = 60/169 (35%), Positives = 86/169 (50%) Frame = +3 Query: 90 KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYIL 269 +PI F E D ++ + + GF +P+ IQ + + GRDVI A++G+GKT L Sbjct: 15 EPIASFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMIAL 74 Query: 270 PGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 449 V + Q LIL+PTRELA Q + G Y ++ GG G Sbjct: 75 TVCQIVDTKSSEVQA-----LILSPTRELAAQTEKVILAIGDYINVQAHACIGGKSVGED 129 Query: 450 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 596 IR L GV++V TPGR+ DM++ R + L+LDE+D ML GF+ Sbjct: 130 IRKLEHGVQVVSGTPGRVCDMIKRRTLRTRGIKLLILDESDEMLSRGFK 178
>ROK1_ASHGO (Q75AE1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 569 Score = 99.4 bits (246), Expect = 7e-21 Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 15/208 (7%) Frame = +3 Query: 15 PCRXTXVAQYRQLRXYHRGRA--GXVPKPIRFFHEA----NFPDYCMQAIAKSGFVEPTP 176 P R T + QLR +RG+ P PI F + + + ++ F EPTP Sbjct: 89 PPRITTAEEASQLRRSYRGKVTGADAPLPIGSFEDLVTRFKLDKRLLSNLIENNFTEPTP 148 Query: 177 IQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTREL 356 IQ + P++L+ RD++ A TGSGKTL++++P L V + + G G LI++PT+EL Sbjct: 149 IQCEAIPISLQNRDIVACAPTGSGKTLAFLIPLLQQVISDKAV--GTGVKGLIISPTKEL 206 Query: 357 AVQIQAEATK-----FGSYSRTRSTCI----YGGAPKGPQIRDLRRGVEIVIATPGRLID 509 A QI E +K F R S + K + D + +I+I+TP RLID Sbjct: 207 ANQIFDECSKLAQRIFLEKKRPLSVALLSKSLAAKLKNQIVSD--KKYDIIISTPLRLID 264 Query: 510 MLEAGHTNLRRVTYLVLDEADRMLDMGF 593 ++++ +L V YL+ DEAD++ D F Sbjct: 265 IVKSESLDLSAVKYLIFDEADKLFDKTF 292 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,927,989 Number of Sequences: 219361 Number of extensions: 2101535 Number of successful extensions: 7016 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 5992 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6244 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
