Clone Name | baalo24 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_463609.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1443 Score = 486 bits (245), Expect = e-134 Identities = 445/512 (86%) Strand = Plus / Plus Query: 84 gtgcccaagcctatccgcttcttccatgaagccaactttccagattactgcatgcaagcg 143 ||||||||||| | |||| |||||| || |||||||| ||||||||||| |||||||| Sbjct: 451 gtgcccaagccggttcgctacttccaggaggccaacttcccagattactgtatgcaagca 510 Query: 144 atcgccaagtccggntttgtggagccaacgcctatccaagctcagggttggccgatggct 203 || |||||| || || || ||||| |||||||| || | || |||||||| |||||| Sbjct: 511 atagccaagagtggattcgtagagcccacgcctattcagtcacaaggttggccaatggct 570 Query: 204 ttgaagggcagggacgtgattggtattgcagaaactggatctgggaaaacactatcttac 263 ||||||||||||||| |||| ||||| ||| ||||||| ||||||||||||||||||||| Sbjct: 571 ttgaagggcagggacatgatcggtatcgcacaaactggctctgggaaaacactatcttac 630 Query: 264 atactacctggtttggttcatgttggtgcacaacctcgactcgaacaaggtgatggccca 323 | || ||||| |||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 631 cttctccctgggttggttcatgttggtgcacagcctcgactagaacaaggtgatggccca 690 Query: 324 attgtcttgatccttgctccaacaagagaactggctgttcaaatacaggcagaagctaca 383 ||||| ||||||||||||| |||||||||||||||||||||||||| |||| || Sbjct: 691 attgttctgatccttgctcctacaagagaactggctgttcaaatacaacaagaatctggc 750 Query: 384 aagtttggatcatactcgagaactagaagcacatgtatctacggtggagcacctaaggga 443 || |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 751 aaatttggatcatactcaagaactagaagcacttgtatctatggtggagcacctaaggga 810 Query: 444 ccacaaatacgtgacctcaggagaggagttgaaatcgtcattgcaacaccaggtcggttg 503 ||||||||||||||||| |||||||| ||||| || |||||||||||||| ||||||||| Sbjct: 811 ccacaaatacgtgaccttaggagaggggttgagattgtcattgcaacacctggtcggttg 870 Query: 504 attgatatgctggaagctggtcacacaaacctacgtcgggttacataccttgtgctggat 563 || ||||||||||||| ||||||||| ||||| || | || |||||||| || |||||| Sbjct: 871 atcgatatgctggaaggtggtcacactaacctgcgaagagtaacatacctcgtcctggat 930 Query: 564 gaggcagaccgtatgctcgatatgggttttga 595 ||||| ||||| ||||| || ||||||||||| Sbjct: 931 gaggctgaccgcatgcttgacatgggttttga 962 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ccccgccgtgcaggccatgtc 21 ||||||||||||||||||||| Sbjct: 372 ccccgccgtgcaggccatgtc 392
>dbj|AK064782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B12, full insert sequence Length = 3413 Score = 486 bits (245), Expect = e-134 Identities = 445/512 (86%) Strand = Plus / Plus Query: 84 gtgcccaagcctatccgcttcttccatgaagccaactttccagattactgcatgcaagcg 143 ||||||||||| | |||| |||||| || |||||||| ||||||||||| |||||||| Sbjct: 597 gtgcccaagccggttcgctacttccaggaggccaacttcccagattactgtatgcaagca 656 Query: 144 atcgccaagtccggntttgtggagccaacgcctatccaagctcagggttggccgatggct 203 || |||||| || || || ||||| |||||||| || | || |||||||| |||||| Sbjct: 657 atagccaagagtggattcgtagagcccacgcctattcagtcacaaggttggccaatggct 716 Query: 204 ttgaagggcagggacgtgattggtattgcagaaactggatctgggaaaacactatcttac 263 ||||||||||||||| |||| ||||| ||| ||||||| ||||||||||||||||||||| Sbjct: 717 ttgaagggcagggacatgatcggtatcgcacaaactggctctgggaaaacactatcttac 776 Query: 264 atactacctggtttggttcatgttggtgcacaacctcgactcgaacaaggtgatggccca 323 | || ||||| |||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 777 cttctccctgggttggttcatgttggtgcacagcctcgactagaacaaggtgatggccca 836 Query: 324 attgtcttgatccttgctccaacaagagaactggctgttcaaatacaggcagaagctaca 383 ||||| ||||||||||||| |||||||||||||||||||||||||| |||| || Sbjct: 837 attgttctgatccttgctcctacaagagaactggctgttcaaatacaacaagaatctggc 896 Query: 384 aagtttggatcatactcgagaactagaagcacatgtatctacggtggagcacctaaggga 443 || |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 897 aaatttggatcatactcaagaactagaagcacttgtatctatggtggagcacctaaggga 956 Query: 444 ccacaaatacgtgacctcaggagaggagttgaaatcgtcattgcaacaccaggtcggttg 503 ||||||||||||||||| |||||||| ||||| || |||||||||||||| ||||||||| Sbjct: 957 ccacaaatacgtgaccttaggagaggggttgagattgtcattgcaacacctggtcggttg 1016 Query: 504 attgatatgctggaagctggtcacacaaacctacgtcgggttacataccttgtgctggat 563 || ||||||||||||| ||||||||| ||||| || | || |||||||| || |||||| Sbjct: 1017 atcgatatgctggaaggtggtcacactaacctgcgaagagtaacatacctcgtcctggat 1076 Query: 564 gaggcagaccgtatgctcgatatgggttttga 595 ||||| ||||| ||||| || ||||||||||| Sbjct: 1077 gaggctgaccgcatgcttgacatgggttttga 1108 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ccccgccgtgcaggccatgtc 21 ||||||||||||||||||||| Sbjct: 518 ccccgccgtgcaggccatgtc 538
>gb|AY466159.1| Zea mays DEAD box RNA helicase (DRH1) mRNA, complete cds Length = 2214 Score = 452 bits (228), Expect = e-124 Identities = 422/485 (87%), Gaps = 4/485 (0%) Strand = Plus / Plus Query: 111 gaagccaactttccagattactgcatgcaagcgatcgccaagtccggntttgtggagcca 170 ||||||||||| |||||||||||||||||||| || ||||| || || |||||||||||| Sbjct: 554 gaagccaacttcccagattactgcatgcaagctattgccaa-tctggatttgtggagcca 612 Query: 171 acgcctatccaagctcagggttggccgatggctttgaagggcagggacgtgattggtatt 230 || ||||| ||| |||| |||||||| ||| |||||||| |||||| |||||||||| Sbjct: 613 acacctattcaatctcaaggttggcctatg---ttgaagggtagggacctgattggtatc 669 Query: 231 gcagaaactggatctgggaaaacactatcttacatactacctggtttggttcatgttggt 290 || |||| || || ||||||||| ||||||| | ||||||| |||||||||||||| Sbjct: 670 gctcaaacaggctcagggaaaacattatcttatctgttacctgggctggttcatgttggt 729 Query: 291 gcacaacctcgactcgaacaaggtgatggcccaattgtcttgatccttgctccaacaaga 350 || || ||||| || |||||||| |||||||||||||| || || || ||||| |||||| Sbjct: 730 gcccagcctcggctagaacaaggcgatggcccaattgtattaattctcgctcccacaaga 789 Query: 351 gaactggctgttcaaatacaggcagaagctacaaagtttggatcatactcgagaactaga 410 |||||||||||||||||||||| |||| ||||||| ||||||||||| || ||||||||| Sbjct: 790 gaactggctgttcaaatacaggaagaatctacaaaatttggatcatattcaagaactaga 849 Query: 411 agcacatgtatctacggtggagcacctaagggaccacaaatacgtgacctcaggagagga 470 ||||||||| |||| ||||| ||||||||||| ||||||||||| ||||| || |||||| Sbjct: 850 agcacatgtgtctatggtggtgcacctaagggtccacaaatacgggaccttagaagagga 909 Query: 471 gttgaaatcgtcattgcaacaccaggtcggttgattgatatgctggaagctggtcacaca 530 |||||||| ||||||||||| || || ||||||||||||||||||||||||||||||||| Sbjct: 910 gttgaaattgtcattgcaactcctggccggttgattgatatgctggaagctggtcacaca 969 Query: 531 aacctacgtcgggttacataccttgtgctggatgaggcagaccgtatgctcgatatgggt 590 ||||||||| | || |||||||||||| |||||||||| ||||| ||||| |||||||| Sbjct: 970 aacctacgtagagtgacataccttgtgttggatgaggctgaccggatgctagatatgggg 1029 Query: 591 tttga 595 ||||| Sbjct: 1030 tttga 1034
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 206 bits (104), Expect = 6e-50 Identities = 149/164 (90%) Strand = Plus / Minus Query: 306 gaacaaggtgatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaa 365 ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 39684703 gaacaaggtgatggcccaattgttctgatccttgctcctacaagagaactggctgttcaa 39684644 Query: 366 atacaggcagaagctacaaagtttggatcatactcgagaactagaagcacatgtatctac 425 ||||| |||| || || |||||||||||||| |||||||||||||| |||||||| Sbjct: 39684643 atacaacaagaatctggcaaatttggatcatactcaagaactagaagcacttgtatctat 39684584 Query: 426 ggtggagcacctaagggaccacaaatacgtgacctcaggagagg 469 ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 39684583 ggtggagcacctaagggaccacaaatacgtgaccttaggagagg 39684540 Score = 155 bits (78), Expect = 2e-34 Identities = 155/181 (85%) Strand = Plus / Minus Query: 124 cagattactgcatgcaagcgatcgccaagtccggntttgtggagccaacgcctatccaag 183 |||||||||| |||||||| || |||||| || || || ||||| |||||||| || Sbjct: 39684965 cagattactgtatgcaagcaatagccaagagtggattcgtagagcccacgcctattcagt 39684906 Query: 184 ctcagggttggccgatggctttgaagggcagggacgtgattggtattgcagaaactggat 243 | || |||||||| ||||||||||||||||||||| |||| ||||| ||| ||||||| | Sbjct: 39684905 cacaaggttggccaatggctttgaagggcagggacatgatcggtatcgcacaaactggct 39684846 Query: 244 ctgggaaaacactatcttacatactacctggtttggttcatgttggtgcacaacctcgac 303 |||||||||||||||||||| | || ||||| |||||||||||||||||||| ||||||| Sbjct: 39684845 ctgggaaaacactatcttaccttctccctgggttggttcatgttggtgcacagcctcgac 39684786 Query: 304 t 304 | Sbjct: 39684785 t 39684785 Score = 113 bits (57), Expect = 7e-22 Identities = 108/125 (86%) Strand = Plus / Minus Query: 471 gttgaaatcgtcattgcaacaccaggtcggttgattgatatgctggaagctggtcacaca 530 ||||| || |||||||||||||| ||||||||||| ||||||||||||| ||||||||| Sbjct: 39684463 gttgagattgtcattgcaacacctggtcggttgatcgatatgctggaaggtggtcacact 39684404 Query: 531 aacctacgtcgggttacataccttgtgctggatgaggcagaccgtatgctcgatatgggt 590 ||||| || | || |||||||| || ||||||||||| ||||| ||||| || |||||| Sbjct: 39684403 aacctgcgaagagtaacatacctcgtcctggatgaggctgaccgcatgcttgacatgggt 39684344 Query: 591 tttga 595 ||||| Sbjct: 39684343 tttga 39684339 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 561 gatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||||||||| ||||| |||||||| ||||||| Sbjct: 5248026 gatgaggcagaccggatgctggatatgggctttgaac 5247990 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 552 cttgtgctggatgaggcagaccgtatgctcgatatgggttttga 595 ||||| || |||||||| ||||| ||||| |||||||||||||| Sbjct: 3715154 cttgttcttgatgaggctgaccgcatgcttgatatgggttttga 3715111 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ccccgccgtgcaggccatgtc 21 ||||||||||||||||||||| Sbjct: 39685200 ccccgccgtgcaggccatgtc 39685180
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 206 bits (104), Expect = 6e-50 Identities = 149/164 (90%) Strand = Plus / Minus Query: 306 gaacaaggtgatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaa 365 ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 165659 gaacaaggtgatggcccaattgttctgatccttgctcctacaagagaactggctgttcaa 165600 Query: 366 atacaggcagaagctacaaagtttggatcatactcgagaactagaagcacatgtatctac 425 ||||| |||| || || |||||||||||||| |||||||||||||| |||||||| Sbjct: 165599 atacaacaagaatctggcaaatttggatcatactcaagaactagaagcacttgtatctat 165540 Query: 426 ggtggagcacctaagggaccacaaatacgtgacctcaggagagg 469 ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 165539 ggtggagcacctaagggaccacaaatacgtgaccttaggagagg 165496 Score = 155 bits (78), Expect = 2e-34 Identities = 155/181 (85%) Strand = Plus / Minus Query: 124 cagattactgcatgcaagcgatcgccaagtccggntttgtggagccaacgcctatccaag 183 |||||||||| |||||||| || |||||| || || || ||||| |||||||| || Sbjct: 165921 cagattactgtatgcaagcaatagccaagagtggattcgtagagcccacgcctattcagt 165862 Query: 184 ctcagggttggccgatggctttgaagggcagggacgtgattggtattgcagaaactggat 243 | || |||||||| ||||||||||||||||||||| |||| ||||| ||| ||||||| | Sbjct: 165861 cacaaggttggccaatggctttgaagggcagggacatgatcggtatcgcacaaactggct 165802 Query: 244 ctgggaaaacactatcttacatactacctggtttggttcatgttggtgcacaacctcgac 303 |||||||||||||||||||| | || ||||| |||||||||||||||||||| ||||||| Sbjct: 165801 ctgggaaaacactatcttaccttctccctgggttggttcatgttggtgcacagcctcgac 165742 Query: 304 t 304 | Sbjct: 165741 t 165741 Score = 113 bits (57), Expect = 7e-22 Identities = 108/125 (86%) Strand = Plus / Minus Query: 471 gttgaaatcgtcattgcaacaccaggtcggttgattgatatgctggaagctggtcacaca 530 ||||| || |||||||||||||| ||||||||||| ||||||||||||| ||||||||| Sbjct: 165419 gttgagattgtcattgcaacacctggtcggttgatcgatatgctggaaggtggtcacact 165360 Query: 531 aacctacgtcgggttacataccttgtgctggatgaggcagaccgtatgctcgatatgggt 590 ||||| || | || |||||||| || ||||||||||| ||||| ||||| || |||||| Sbjct: 165359 aacctgcgaagagtaacatacctcgtcctggatgaggctgaccgcatgcttgacatgggt 165300 Query: 591 tttga 595 ||||| Sbjct: 165299 tttga 165295 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ccccgccgtgcaggccatgtc 21 ||||||||||||||||||||| Sbjct: 166156 ccccgccgtgcaggccatgtc 166136
>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0470A12 Length = 185095 Score = 206 bits (104), Expect = 6e-50 Identities = 149/164 (90%) Strand = Plus / Minus Query: 306 gaacaaggtgatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaa 365 ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 35602 gaacaaggtgatggcccaattgttctgatccttgctcctacaagagaactggctgttcaa 35543 Query: 366 atacaggcagaagctacaaagtttggatcatactcgagaactagaagcacatgtatctac 425 ||||| |||| || || |||||||||||||| |||||||||||||| |||||||| Sbjct: 35542 atacaacaagaatctggcaaatttggatcatactcaagaactagaagcacttgtatctat 35483 Query: 426 ggtggagcacctaagggaccacaaatacgtgacctcaggagagg 469 ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 35482 ggtggagcacctaagggaccacaaatacgtgaccttaggagagg 35439 Score = 155 bits (78), Expect = 2e-34 Identities = 155/181 (85%) Strand = Plus / Minus Query: 124 cagattactgcatgcaagcgatcgccaagtccggntttgtggagccaacgcctatccaag 183 |||||||||| |||||||| || |||||| || || || ||||| |||||||| || Sbjct: 35864 cagattactgtatgcaagcaatagccaagagtggattcgtagagcccacgcctattcagt 35805 Query: 184 ctcagggttggccgatggctttgaagggcagggacgtgattggtattgcagaaactggat 243 | || |||||||| ||||||||||||||||||||| |||| ||||| ||| ||||||| | Sbjct: 35804 cacaaggttggccaatggctttgaagggcagggacatgatcggtatcgcacaaactggct 35745 Query: 244 ctgggaaaacactatcttacatactacctggtttggttcatgttggtgcacaacctcgac 303 |||||||||||||||||||| | || ||||| |||||||||||||||||||| ||||||| Sbjct: 35744 ctgggaaaacactatcttaccttctccctgggttggttcatgttggtgcacagcctcgac 35685 Query: 304 t 304 | Sbjct: 35684 t 35684 Score = 113 bits (57), Expect = 7e-22 Identities = 108/125 (86%) Strand = Plus / Minus Query: 471 gttgaaatcgtcattgcaacaccaggtcggttgattgatatgctggaagctggtcacaca 530 ||||| || |||||||||||||| ||||||||||| ||||||||||||| ||||||||| Sbjct: 35362 gttgagattgtcattgcaacacctggtcggttgatcgatatgctggaaggtggtcacact 35303 Query: 531 aacctacgtcgggttacataccttgtgctggatgaggcagaccgtatgctcgatatgggt 590 ||||| || | || |||||||| || ||||||||||| ||||| ||||| || |||||| Sbjct: 35302 aacctgcgaagagtaacatacctcgtcctggatgaggctgaccgcatgcttgacatgggt 35243 Query: 591 tttga 595 ||||| Sbjct: 35242 tttga 35238 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ccccgccgtgcaggccatgtc 21 ||||||||||||||||||||| Sbjct: 36099 ccccgccgtgcaggccatgtc 36079
>ref|NM_125706.2| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT5G63120 transcript variant AT5G63120.1 mRNA, complete cds Length = 2372 Score = 103 bits (52), Expect = 7e-19 Identities = 163/200 (81%) Strand = Plus / Plus Query: 165 gagccaacgcctatccaagctcagggttggccgatggctttgaagggcagggacgtgatt 224 |||||||| ||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 753 gagccaacacctatacaagctcagggatggccgatggcgttgaagggtagggatttgatt 812 Query: 225 ggtattgcagaaactggatctgggaaaacactatcttacatactacctggtttggttcat 284 |||||||| || ||||| ||||| || ||| | ||||| | |||| | |||||||| Sbjct: 813 ggtattgctgagactggctctggtaagacattggcttacttgttaccagcattggttcac 872 Query: 285 gttggtgcacaacctcgactcgaacaaggtgatggcccaattgtcttgatccttgctcca 344 ||| |||||||||||||| | | || | ||||||||| ||||| || || | ||||| Sbjct: 873 gttagtgcacaacctcgattaggtcaggatgatggccccattgtgttaatattagctccc 932 Query: 345 acaagagaactggctgttca 364 ||||||||||| |||||||| Sbjct: 933 acaagagaactagctgttca 952 Score = 63.9 bits (32), Expect = 6e-07 Identities = 92/112 (82%) Strand = Plus / Plus Query: 407 tagaagcacatgtatctacggtggagcacctaagggaccacaaatacgtgacctcaggag 466 |||||| || |||||||| ||||| || ||||| ||||| || || ||||| || || || Sbjct: 995 tagaagtacttgtatctatggtggtgctcctaaaggacctcagattcgtgatcttagaag 1054 Query: 467 aggagttgaaatcgtcattgcaacaccaggtcggttgattgatatgctggaa 518 ||| ||||| || || ||||| ||||| ||||| |||||||||||| ||||| Sbjct: 1055 aggtgttgagattgtaattgctacacctggtcgtttgattgatatgttggaa 1106
>ref|NM_203256.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT5G63120 transcript variant AT5G63120.2 mRNA, complete cds Length = 2185 Score = 103 bits (52), Expect = 7e-19 Identities = 163/200 (81%) Strand = Plus / Plus Query: 165 gagccaacgcctatccaagctcagggttggccgatggctttgaagggcagggacgtgatt 224 |||||||| ||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 753 gagccaacacctatacaagctcagggatggccgatggcgttgaagggtagggatttgatt 812 Query: 225 ggtattgcagaaactggatctgggaaaacactatcttacatactacctggtttggttcat 284 |||||||| || ||||| ||||| || ||| | ||||| | |||| | |||||||| Sbjct: 813 ggtattgctgagactggctctggtaagacattggcttacttgttaccagcattggttcac 872 Query: 285 gttggtgcacaacctcgactcgaacaaggtgatggcccaattgtcttgatccttgctcca 344 ||| |||||||||||||| | | || | ||||||||| ||||| || || | ||||| Sbjct: 873 gttagtgcacaacctcgattaggtcaggatgatggccccattgtgttaatattagctccc 932 Query: 345 acaagagaactggctgttca 364 ||||||||||| |||||||| Sbjct: 933 acaagagaactagctgttca 952 Score = 63.9 bits (32), Expect = 6e-07 Identities = 92/112 (82%) Strand = Plus / Plus Query: 407 tagaagcacatgtatctacggtggagcacctaagggaccacaaatacgtgacctcaggag 466 |||||| || |||||||| ||||| || ||||| ||||| || || ||||| || || || Sbjct: 995 tagaagtacttgtatctatggtggtgctcctaaaggacctcagattcgtgatcttagaag 1054 Query: 467 aggagttgaaatcgtcattgcaacaccaggtcggttgattgatatgctggaa 518 ||| ||||| || || ||||| ||||| ||||| |||||||||||| ||||| Sbjct: 1055 aggtgttgagattgtaattgctacacctggtcgtttgattgatatgttggaa 1106
>gb|BT000610.1| Arabidopsis thaliana AtP-dependent RNA helicase-like protein (At5g63120/MDC12_8) mRNA, complete cds Length = 1455 Score = 103 bits (52), Expect = 7e-19 Identities = 163/200 (81%) Strand = Plus / Plus Query: 165 gagccaacgcctatccaagctcagggttggccgatggctttgaagggcagggacgtgatt 224 |||||||| ||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 559 gagccaacacctatacaagctcagggatggccgatggcgttgaagggtagggatttgatt 618 Query: 225 ggtattgcagaaactggatctgggaaaacactatcttacatactacctggtttggttcat 284 |||||||| || ||||| ||||| || ||| | ||||| | |||| | |||||||| Sbjct: 619 ggtattgctgagactggctctggtaagacattggcttacttgttaccagcattggttcac 678 Query: 285 gttggtgcacaacctcgactcgaacaaggtgatggcccaattgtcttgatccttgctcca 344 ||| |||||||||||||| | | || | ||||||||| ||||| || || | ||||| Sbjct: 679 gttagtgcacaacctcgattaggtcaggatgatggccccattgtgttaatattagctccc 738 Query: 345 acaagagaactggctgttca 364 ||||||||||| |||||||| Sbjct: 739 acaagagaactagctgttca 758 Score = 63.9 bits (32), Expect = 6e-07 Identities = 92/112 (82%) Strand = Plus / Plus Query: 407 tagaagcacatgtatctacggtggagcacctaagggaccacaaatacgtgacctcaggag 466 |||||| || |||||||| ||||| || ||||| ||||| || || ||||| || || || Sbjct: 801 tagaagtacttgtatctatggtggtgctcctaaaggacctcagattcgtgatcttagaag 860 Query: 467 aggagttgaaatcgtcattgcaacaccaggtcggttgattgatatgctggaa 518 ||| ||||| || || ||||| ||||| ||||| |||||||||||| ||||| Sbjct: 861 aggtgttgagattgtaattgctacacctggtcgtttgattgatatgttggaa 912
>gb|AY060589.1| Arabidopsis thaliana AT5g63120/MDC12_8 mRNA, complete cds Length = 2366 Score = 103 bits (52), Expect = 7e-19 Identities = 163/200 (81%) Strand = Plus / Plus Query: 165 gagccaacgcctatccaagctcagggttggccgatggctttgaagggcagggacgtgatt 224 |||||||| ||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 754 gagccaacacctatacaagctcagggatggccgatggcgttgaagggtagggatttgatt 813 Query: 225 ggtattgcagaaactggatctgggaaaacactatcttacatactacctggtttggttcat 284 |||||||| || ||||| ||||| || ||| | ||||| | |||| | |||||||| Sbjct: 814 ggtattgctgagactggctctggtaagacattggcttacttgttaccagcattggttcac 873 Query: 285 gttggtgcacaacctcgactcgaacaaggtgatggcccaattgtcttgatccttgctcca 344 ||| |||||||||||||| | | || | ||||||||| ||||| || || | ||||| Sbjct: 874 gttagtgcacaacctcgattaggtcaggatgatggccccattgtgttaatattagctccc 933 Query: 345 acaagagaactggctgttca 364 ||||||||||| |||||||| Sbjct: 934 acaagagaactagctgttca 953 Score = 63.9 bits (32), Expect = 6e-07 Identities = 92/112 (82%) Strand = Plus / Plus Query: 407 tagaagcacatgtatctacggtggagcacctaagggaccacaaatacgtgacctcaggag 466 |||||| || |||||||| ||||| || ||||| ||||| || || ||||| || || || Sbjct: 996 tagaagtacttgtatctatggtggtgctcctaaaggacctcagattcgtgatcttagaag 1055 Query: 467 aggagttgaaatcgtcattgcaacaccaggtcggttgattgatatgctggaa 518 ||| ||||| || || ||||| ||||| ||||| |||||||||||| ||||| Sbjct: 1056 aggtgttgagattgtaattgctacacctggtcgtttgattgatatgttggaa 1107
>emb|BX832051.1|CNS09YVO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH48ZH12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2119 Score = 91.7 bits (46), Expect = 2e-15 Identities = 115/138 (83%) Strand = Plus / Plus Query: 165 gagccaacgcctatccaagctcagggttggccgatggctttgaagggcagggacgtgatt 224 |||||||| ||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 742 gagccaacacctatacaagctcagggatggccgatggcgttgaagggtagggatttgatt 801 Query: 225 ggtattgcagaaactggatctgggaaaacactatcttacatactacctggtttggttcat 284 |||||||| || ||||| ||||| || ||| | ||||| | |||| | |||||||| Sbjct: 802 ggtattgctgagactggctctggtaagacattggcttacttgttaccagcattggttcac 861 Query: 285 gttggtgcacaacctcga 302 ||| |||||||||||||| Sbjct: 862 gttagtgcacaacctcga 879 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 465 agaggagttgaaatcgtcattgcaacaccaggtcggttgattgatatgctggaa 518 ||||| ||||| || || ||||| ||||| ||||| |||||||||||| ||||| Sbjct: 1041 agaggtgttgagattgtaattgctacacctggtcgtttgattgatatgttggaa 1094
>dbj|AB008265.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDC12 Length = 81662 Score = 91.7 bits (46), Expect = 2e-15 Identities = 115/138 (83%) Strand = Plus / Minus Query: 165 gagccaacgcctatccaagctcagggttggccgatggctttgaagggcagggacgtgatt 224 |||||||| ||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 29983 gagccaacacctatacaagctcagggatggccgatggcgttgaagggtagggatttgatt 29924 Query: 225 ggtattgcagaaactggatctgggaaaacactatcttacatactacctggtttggttcat 284 |||||||| || ||||| ||||| || ||| | ||||| | |||| | |||||||| Sbjct: 29923 ggtattgctgagactggctctggtaagacattggcttacttgttaccagcattggttcac 29864 Query: 285 gttggtgcacaacctcga 302 ||| |||||||||||||| Sbjct: 29863 gttagtgcacaacctcga 29846 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 483 attgcaacaccaggtcggttgattgatatgctggaa 518 ||||| ||||| ||||| |||||||||||| ||||| Sbjct: 29490 attgctacacctggtcgtttgattgatatgttggaa 29455
>ref|NM_004396.2| Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (DDX5), mRNA Length = 2325 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 768 tgtatctacggtggtgctcctaagggaccacaaatacgtga 808
>ref|XM_512004.1| PREDICTED: Pan troglodytes DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (LOC455267), mRNA Length = 1462 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 743 tgtatctacggtggtgctcctaagggaccacaaatacgtga 783
>gb|BC016027.1| Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, mRNA (cDNA clone MGC:1516 IMAGE:3528578), complete cds Length = 2366 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 739 tgtatctacggtggtgctcctaagggaccacaaatacgtga 779
>ref|XM_448941.1| Candida glabrata CBS138, CAGL0L03846 partial mRNA Length = 1635 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 311 aggtgatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaaat 367 ||||||||| |||||||||||| | || |||||||| |||||||| ||||||||||| Sbjct: 540 aggtgatggtccaattgtcttggttctagctccaaccagagaacttgctgttcaaat 596 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Plus Query: 473 tgaaatcgtcattgcaacaccaggtcggttgattgatatgctggaagc 520 |||||| |||||||| || |||||| | |||||||||||||| ||||| Sbjct: 702 tgaaattgtcattgctaccccaggtagattgattgatatgcttgaagc 749
>emb|X52104.1|HSP68A Human mRNA for p68 protein Length = 2330 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 773 tgtatctacggtggtgctcctaagggaccacaaatacgtga 813
>emb|X15729.1|HSNP68M Human mRNA for nuclear p68 protein Length = 2323 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 765 tgtatctacggtggtgctcctaagggaccacaaatacgtga 805
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence Length = 1440588 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 311 aggtgatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaaat 367 ||||||||| |||||||||||| | || |||||||| |||||||| ||||||||||| Sbjct: 443875 aggtgatggtccaattgtcttggttctagctccaaccagagaacttgctgttcaaat 443819 Score = 48.1 bits (24), Expect = 0.033 Identities = 42/48 (87%) Strand = Plus / Minus Query: 473 tgaaatcgtcattgcaacaccaggtcggttgattgatatgctggaagc 520 |||||| |||||||| || |||||| | |||||||||||||| ||||| Sbjct: 443713 tgaaattgtcattgctaccccaggtagattgattgatatgcttgaagc 443666
>emb|BX571764.1|HSM806634 Homo sapiens mRNA; cDNA DKFZp686J01190 (from clone DKFZp686J01190) Length = 3572 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 769 tgtatctacggtggtgctcctaagggaccacaaatacgtga 809
>gb|BT007642.1| Synthetic construct Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase, 68kDa) mRNA, partial cds Length = 1845 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 598 tgtatctacggtggtgctcctaagggaccacaaatacgtga 638
>gb|BT006943.1| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase, 68kDa) mRNA, complete cds Length = 1845 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 598 tgtatctacggtggtgctcctaagggaccacaaatacgtga 638
>emb|CR607012.1| full-length cDNA clone CS0DA009YD21 of Neuroblastoma of Homo sapiens (human) Length = 1800 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 265 tgtatctacggtggtgctcctaagggaccacaaatacgtga 305
>gb|AF479823.1| Pantodon buchholzi DEAD box RNA helicase Vasa mRNA, complete cds Length = 1512 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| ||||||||||||||||| ||| | |||||||||||||||| Sbjct: 340 taccttgtactggatgaggcagaccgcatgttggatatgggttttgaac 388
>gb|AC138744.4| Homo sapiens chromosome 17, clone RP11-859E19, complete sequence Length = 177325 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 169364 tgtatctacggtggtgctcctaagggaccacaaatacgtga 169324
>gb|AY892740.1| Synthetic construct Homo sapiens clone FLH024742.01L DEAD box polypeptide 5 (DDX5) mRNA, partial cds Length = 1845 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 598 tgtatctacggtggtgctcctaagggaccacaaatacgtga 638
>gb|AY890256.1| Synthetic construct Homo sapiens clone FLH024746.01X DEAD box polypeptide 5 (DDX5) mRNA, complete cds Length = 1845 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 598 tgtatctacggtggtgctcctaagggaccacaaatacgtga 638
>gb|AY890255.1| Synthetic construct Homo sapiens clone FLH024745.01X DEAD box polypeptide 5 (DDX5) mRNA, complete cds Length = 1845 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 598 tgtatctacggtggtgctcctaagggaccacaaatacgtga 638
>gb|AF015812.1|AF015812 Homo sapiens RNA helicase p68 (HUMP68) gene, complete cds Length = 7834 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 3767 tgtatctacggtggtgctcctaagggaccacaaatacgtga 3807
>dbj|AB209919.1| Homo sapiens mRNA for Hypothetical protein DKFZp686J01190 variant protein Length = 3539 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 752 tgtatctacggtggtgctcctaagggaccacaaatacgtga 792
>gb|AC009994.10| Homo sapiens chromosome 17, clone RP11-87N3, complete sequence Length = 188552 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||||||||| || ||||||||||||||||||||||| Sbjct: 149714 tgtatctacggtggtgctcctaagggaccacaaatacgtga 149754
>emb|AJ010476.1|ATH010476 Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH30 Length = 790 Score = 63.9 bits (32), Expect = 6e-07 Identities = 92/112 (82%) Strand = Plus / Plus Query: 407 tagaagcacatgtatctacggtggagcacctaagggaccacaaatacgtgacctcaggag 466 |||||| || |||||||| ||||| || ||||| ||||| || || ||||| || || || Sbjct: 34 tagaagtacttgtatctatggtggtgctcctaaaggacctcagattcgtgatcttagaag 93 Query: 467 aggagttgaaatcgtcattgcaacaccaggtcggttgattgatatgctggaa 518 ||| ||||| || || ||||| ||||| ||||| |||||||||||| ||||| Sbjct: 94 aggtgttgagattgtaattgctacacctggtcgtttgattgatatgttggaa 145
>gb|AC145395.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0047M04, complete sequence Length = 109523 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 552 cttgtgctggatgaggcagaccgtatgctcgatatgggttttga 595 |||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 77215 cttgtgcttgatgaggctgaccgtatgcttgatatgggttttga 77258
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 552 cttgtgctggatgaggcagaccgtatgctcgatatgggttttga 595 |||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 27126162 cttgtgcttgatgaggctgaccgtatgcttgatatgggttttga 27126205 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggttttgaac 597 ||||||||||| | ||||| |||||||||||||||| Sbjct: 22097173 gatgaggcagatagaatgcttgatatgggttttgaac 22097209
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 552 cttgtgctggatgaggcagaccgtatgctcgatatgggttttga 595 |||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 27453215 cttgtgcttgatgaggctgaccgtatgcttgatatgggttttga 27453258 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggttttgaac 597 ||||||||||| | ||||| |||||||||||||||| Sbjct: 22407120 gatgaggcagatagaatgcttgatatgggttttgaac 22407156
>gb|BT012961.1| Lycopersicon esculentum clone 114151R, mRNA sequence Length = 1763 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 471 gttgaaatcgtcattgcaacaccaggtcggttgattgatatgctggaagctggtcacaca 530 |||||||| || ||||| ||||| || |||||||||||||| | ||| || ||| ||| Sbjct: 701 gttgaaattgttattgccacacctggaaggttgattgatatgttagaatctaatcataca 760 Query: 531 aacctacgtcgggttacataccttgtgctggatgaggcagaccgtatgctcgatatgggt 590 || || || | || ||||| || |||||||||||||| ||||| ||||| || |||||| Sbjct: 761 aatcttcgaagagtgacatatctcgtgctggatgaggctgaccgcatgctagacatgggt 820 Query: 591 tttgaac 597 ||||||| Sbjct: 821 tttgaac 827
>emb|CR861259.1| Pongo pygmaeus mRNA; cDNA DKFZp459M043 (from clone DKFZp459M043) Length = 3724 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||| ||||| || ||||||||||||||||||||||| Sbjct: 768 tgtatctatggtggtgctcctaagggaccacaaatacgtga 808
>ref|XM_658443.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5931.2), mRNA Length = 1692 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 504 attgatatgctggaagctggtcacacaaacctacgtcgggttacataccttgtgctggat 563 ||||||||||| |||||||| | ||| ||||| || || ||||| ||||| || || || Sbjct: 823 attgatatgctcgaagctggccgcaccaaccttcgccgagttacttacctcgttcttgac 882 Query: 564 gaggcagaccgtatgctcgatatgggttttga 595 ||||| ||||| ||| | |||||||||||||| Sbjct: 883 gaggccgaccgcatgttggatatgggttttga 914
>ref|XM_502093.1| Yarrowia lipolytica CLIB122, YALI0C21472g predicted mRNA Length = 1857 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttt 592 |||||||| || |||||||| ||||| ||||||||||||||||| Sbjct: 961 taccttgtccttgatgaggccgaccgaatgctcgatatgggttt 1004
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttt 592 |||||||| || |||||||| ||||| ||||||||||||||||| Sbjct: 2869924 taccttgtccttgatgaggccgaccgaatgctcgatatgggttt 2869881
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 558 ctggatgaggcagaccgtatgctcgatatgggtttt 593 ||||||||||||||||| |||||||| ||||||||| Sbjct: 3049759 ctggatgaggcagaccggatgctcgacatgggtttt 3049724
>gb|BT016697.1| Zea mays clone Contig530 mRNA sequence Length = 1750 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 159 tttgtggagccaacgcctatccaagctcagggttggccgatggctttgaagggcagggac 218 |||||||| || || ||||||||| | || |||||||||||||| |||| ||| | ||| Sbjct: 253 tttgtggaacctacccctatccaatcgcaaggttggccgatggcattgagaggccgcgac 312 Query: 219 gtgattggtattgcagaaactggatctgggaaaac 253 | ||||| |||||||| || ||||| |||||||| Sbjct: 313 cttattggcattgcagagacaggatcagggaaaac 347 Score = 42.1 bits (21), Expect = 2.1 Identities = 63/77 (81%) Strand = Plus / Plus Query: 315 gatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaaatacaggca 374 ||||| |||||||||||| | | ||||| ||| | ||||| |||||||| |||||| | Sbjct: 409 gatggtccaattgtcttggtgttagctcctacacgtgaacttgctgttcagatacagcaa 468 Query: 375 gaagctacaaagtttgg 391 ||||| || |||||||| Sbjct: 469 gaagcaaccaagtttgg 485
>gb|AY587260.1| Sparus aurata vasa-like protein mRNA, partial cds Length = 594 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 553 ttgtgctggatgaggcagaccgtatgctcgatatgggttttga 595 |||||||||||||||| ||||| ||| | |||||||||||||| Sbjct: 371 ttgtgctggatgaggctgaccggatgttggatatgggttttga 413
>gb|AF520608.1| Sparus aurata vasa-like mRNA, partial cds Length = 1586 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 553 ttgtgctggatgaggcagaccgtatgctcgatatgggttttga 595 |||||||||||||||| ||||| ||| | |||||||||||||| Sbjct: 344 ttgtgctggatgaggctgaccggatgttggatatgggttttga 386
>emb|X52648.1|SPP68 Schizosaccharomyces pombe p68 gene for p68 protein Length = 2742 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 555 gtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 ||||||||||| || ||||| ||||| |||||||||||||||| Sbjct: 1102 gtgctggatgaagccgaccgaatgcttgatatgggttttgaac 1144
>emb|AL032684.1|SPBP8B7 S.pombe chromosome II p1 p8B7 Length = 71000 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 555 gtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 ||||||||||| || ||||| ||||| |||||||||||||||| Sbjct: 31858 gtgctggatgaagccgaccgaatgcttgatatgggttttgaac 31816
>gb|DQ399799.1| Acanthopagrus schlegelii vasa protein mRNA, partial cds Length = 780 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 553 ttgtgctggatgaggcagaccgtatgctcgatatgggttttga 595 |||||||||||||||| ||||| ||| | |||||||||||||| Sbjct: 200 ttgtgctggatgaggctgaccggatgttggatatgggttttga 242
>ref|NM_001022444.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBP8B7.16c), partial mRNA Length = 1653 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 555 gtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 ||||||||||| || ||||| ||||| |||||||||||||||| Sbjct: 820 gtgctggatgaagccgaccgaatgcttgatatgggttttgaac 862
>dbj|AK068197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140N02, full insert sequence Length = 4012 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 521 tggtcacacaaacctacgtcgggttacataccttgtgctggatgaggcagaccgtatgct 580 ||||||||| ||||| || | || |||||||| || ||||||||||| ||||| ||||| Sbjct: 2 tggtcacactaacctgcgaagagtaacatacctcgtcctggatgaggctgaccgcatgct 61 Query: 581 cgatatgggttttga 595 || ||||||||||| Sbjct: 62 tgacatgggttttga 76
>gb|AF096248.1|AF096248 Lycopersicon esculentum ethylene-responsive RNA helicase (ER68) mRNA, complete cds Length = 1752 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 555 gtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||||||||| ||||| ||||| || ||||||||||||| Sbjct: 824 gtgctggatgaggctgaccgcatgctagacatgggttttgaac 866
>dbj|AP006094.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39H01, TM0172, complete sequence Length = 127731 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 159 tttgtggagccaacgcctatccaagctcagggttggccgatggctttgaagggcagggac 218 ||||| ||||| || || ||||| |||||||||||||| |||||| ||| ||| ||||| Sbjct: 104909 tttgttgagcccactccaatccaggctcagggttggcccatggctctgacgggtagggat 104850 Query: 219 gtgattggtattgcagaaactgg 241 ||||||| ||||| || ||||| Sbjct: 104849 ttgattggcattgctgagactgg 104827
>gb|L11574.1|YSPP68DBP Schizosaccharomyces pombe p68 RNA helicase (dbp2) mRNA, complete cds Length = 1780 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 555 gtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 ||||||||||| || ||||| ||||| |||||||||||||||| Sbjct: 820 gtgctggatgaagccgaccgaatgcttgatatgggttttgaac 862
>ref|NM_104388.2| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT1G55150 mRNA, complete cds Length = 1825 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 526 acacaaacctacgtcgggttacataccttgtgctggatgaggcagaccgtatgctcgata 585 ||||||||||||| ||||||| || ||||| |||||||||| || || ||||| |||| Sbjct: 872 acacaaacctacgaagggttacttatcttgttttggatgaggctgatcgaatgcttgata 931 Query: 586 tgggttttga 595 |||| ||||| Sbjct: 932 tggggtttga 941
>ref|NM_111523.2| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT3G06480 mRNA, complete cds Length = 3605 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 552 cttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| || ||||||||||| ||||| || ||||||||||||| Sbjct: 1849 cttgtgcttgacgaggcagaccgaatgcttgacatgggttttgaac 1894
>ref|XR_002773.1| PREDICTED: Mus musculus hypothetical protein LOC670055 (LOC670055), mRNA Length = 2773 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||||||||||| Sbjct: 1070 actggatctgggaaaacactatctta 1095
>gb|AC011623.5|ATAC011623 Arabidopsis thaliana chromosome III BAC F24P17 genomic sequence, complete sequence Length = 86022 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 552 cttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| || ||||||||||| ||||| || ||||||||||||| Sbjct: 4902 cttgtgcttgacgaggcagaccgaatgcttgacatgggttttgaac 4947
>emb|AL645849.17| Mouse DNA sequence from clone RP23-14F5 on chromosome 11 Contains a DEAD box polypeptide 5 (Ddx5) pseudogene, the Gnb2-rs1 gene for guanine nucleotide binding protein, beta 2 related sequence 1, the Trim41 gene for tripartite motif-containing 41, a novel protein similar to CDK2 (cyclin-dependent kinase 2)-associated protein 1 (Cdkap1), the Trim7 gene for tripartite motif protein 7, the Ifi1 gene for interferon inducible protein 1, a novel gene (LOC277018), two novel genes and four CpG islands, complete sequence Length = 202559 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||||||||||| Sbjct: 13020 actggatctgggaaaacactatctta 12995
>ref|NM_204708.1| Gallus gallus DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 (DDX4), mRNA Length = 1989 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggttttg 594 ||||| |||||||| ||||||||||||||||||| Sbjct: 1177 gatgaagcagaccgcatgctcgatatgggttttg 1210
>gb|AY128786.1| Arabidopsis thaliana unknown protein (At1g55150) mRNA, complete cds Length = 1539 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 526 acacaaacctacgtcgggttacataccttgtgctggatgaggcagaccgtatgctcgata 585 ||||||||||||| ||||||| || ||||| |||||||||| || || ||||| |||| Sbjct: 722 acacaaacctacgaagggttacttatcttgttttggatgaggctgatcgaatgcttgata 781 Query: 586 tgggttttga 595 |||| ||||| Sbjct: 782 tggggtttga 791 Score = 40.1 bits (20), Expect = 8.1 Identities = 50/60 (83%) Strand = Plus / Plus Query: 312 ggtgatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaaatacag 371 ||||| |||||||| |||||| | |||||||| || | ||||||||||| || |||||| Sbjct: 508 ggtgacggcccaatcgtcttggttcttgctcccactcgtgaactggctgtgcagatacag 567
>gb|AY062745.1| Arabidopsis thaliana Unknown protein (At1g55150; T7N22.9) mRNA, complete cds Length = 1814 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 526 acacaaacctacgtcgggttacataccttgtgctggatgaggcagaccgtatgctcgata 585 ||||||||||||| ||||||| || ||||| |||||||||| || || ||||| |||| Sbjct: 872 acacaaacctacgaagggttacttatcttgttttggatgaggctgatcgaatgcttgata 931 Query: 586 tgggttttga 595 |||| ||||| Sbjct: 932 tggggtttga 941
>emb|BX813460.1|CNS0AC9L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZH04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1731 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 526 acacaaacctacgtcgggttacataccttgtgctggatgaggcagaccgtatgctcgata 585 ||||||||||||| ||||||| || ||||| |||||||||| || || ||||| |||| Sbjct: 850 acacaaacctacgaagggttacttatcttgttttggatgaggctgatcgaatgcttgata 909 Query: 586 tgggttttga 595 |||| ||||| Sbjct: 910 tggggtttga 919 Score = 40.1 bits (20), Expect = 8.1 Identities = 50/60 (83%) Strand = Plus / Plus Query: 312 ggtgatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaaatacag 371 ||||| |||||||| |||||| | |||||||| || | ||||||||||| || |||||| Sbjct: 636 ggtgacggcccaatcgtcttggttcttgctcccactcgtgaactggctgtgcagatacag 695
>gb|AC073944.6|AC073944 Arabidopsis thaliana chromosome 1 BAC T7N22 genomic sequence, complete sequence Length = 44540 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 526 acacaaacctacgtcgggttacataccttgtgctggatgaggcagaccgtatgctcgata 585 ||||||||||||| ||||||| || ||||| |||||||||| || || ||||| |||| Sbjct: 35818 acacaaacctacgaagggttacttatcttgttttggatgaggctgatcgaatgcttgata 35877 Query: 586 tgggttttga 595 |||| ||||| Sbjct: 35878 tggggtttga 35887 Score = 40.1 bits (20), Expect = 8.1 Identities = 50/60 (83%) Strand = Plus / Plus Query: 312 ggtgatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaaatacag 371 ||||| |||||||| |||||| | |||||||| || | ||||||||||| || |||||| Sbjct: 35499 ggtgacggcccaatcgtcttggttcttgctcccactcgtgaactggctgtgcagatacag 35558
>emb|AJ010936.1|HSA010936 Homo sapiens ddx5-ps1 gene, partial Length = 334 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||||||||||| Sbjct: 262 actggatctgggaaaacactatctta 287
>dbj|AB004836.1| Gallus gallus mRNA for Cvh, complete cds Length = 1989 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggttttg 594 ||||| |||||||| ||||||||||||||||||| Sbjct: 1177 gatgaagcagaccgcatgctcgatatgggttttg 1210
>ref|NM_188251.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1485 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||||||||| ||||| |||||||| ||||||| Sbjct: 733 gatgaggcagaccggatgctggatatgggctttgaac 769
>emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome II, complete sequence Length = 635328 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatggg 589 ||||| ||||||||||||||||||||||| Sbjct: 468000 gatgaagcagaccgtatgctcgatatggg 468028
>ref|XM_855709.1| PREDICTED: Canis familiaris similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17), transcript variant 14 (LOC474508), mRNA Length = 4759 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| ||||||||||| ||| | ||||| |||||||| ||||||| Sbjct: 1058 taccttgtactggatgaggctgacaggatgcttgatatgggctttgaac 1106
>ref|XM_855680.1| PREDICTED: Canis familiaris similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17), transcript variant 13 (LOC474508), mRNA Length = 4789 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| ||||||||||| ||| | ||||| |||||||| ||||||| Sbjct: 980 taccttgtactggatgaggctgacaggatgcttgatatgggctttgaac 1028
>ref|XM_855640.1| PREDICTED: Canis familiaris similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17), transcript variant 12 (LOC474508), mRNA Length = 4885 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| ||||||||||| ||| | ||||| |||||||| ||||||| Sbjct: 1058 taccttgtactggatgaggctgacaggatgcttgatatgggctttgaac 1106
>ref|XM_845027.1| PREDICTED: Canis familiaris similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17), transcript variant 2 (LOC474508), mRNA Length = 4873 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| ||||||||||| ||| | ||||| |||||||| ||||||| Sbjct: 1058 taccttgtactggatgaggctgacaggatgcttgatatgggctttgaac 1106
>ref|XM_855575.1| PREDICTED: Canis familiaris similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17), transcript variant 11 (LOC474508), mRNA Length = 4870 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| ||||||||||| ||| | ||||| |||||||| ||||||| Sbjct: 1058 taccttgtactggatgaggctgacaggatgcttgatatgggctttgaac 1106
>ref|XM_531736.2| PREDICTED: Canis familiaris similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17), transcript variant 1 (LOC474508), mRNA Length = 4909 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| ||||||||||| ||| | ||||| |||||||| ||||||| Sbjct: 1058 taccttgtactggatgaggctgacaggatgcttgatatgggctttgaac 1106
>ref|XM_855514.1| PREDICTED: Canis familiaris similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17), transcript variant 10 (LOC474508), mRNA Length = 4882 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| ||||||||||| ||| | ||||| |||||||| ||||||| Sbjct: 1058 taccttgtactggatgaggctgacaggatgcttgatatgggctttgaac 1106
>ref|XM_855481.1| PREDICTED: Canis familiaris similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17), transcript variant 9 (LOC474508), mRNA Length = 1645 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| ||||||||||| ||| | ||||| |||||||| ||||||| Sbjct: 1058 taccttgtactggatgaggctgacaggatgcttgatatgggctttgaac 1106
>ref|XM_855444.1| PREDICTED: Canis familiaris similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17), transcript variant 8 (LOC474508), mRNA Length = 1946 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| ||||||||||| ||| | ||||| |||||||| ||||||| Sbjct: 1058 taccttgtactggatgaggctgacaggatgcttgatatgggctttgaac 1106
>ref|XM_855416.1| PREDICTED: Canis familiaris similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17), transcript variant 7 (LOC474508), mRNA Length = 1637 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| ||||||||||| ||| | ||||| |||||||| ||||||| Sbjct: 1058 taccttgtactggatgaggctgacaggatgcttgatatgggctttgaac 1106
>ref|XM_855385.1| PREDICTED: Canis familiaris similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17), transcript variant 6 (LOC474508), mRNA Length = 1887 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| ||||||||||| ||| | ||||| |||||||| ||||||| Sbjct: 1058 taccttgtactggatgaggctgacaggatgcttgatatgggctttgaac 1106
>ref|XM_855349.1| PREDICTED: Canis familiaris similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17), transcript variant 5 (LOC474508), mRNA Length = 4807 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| ||||||||||| ||| | ||||| |||||||| ||||||| Sbjct: 1058 taccttgtactggatgaggctgacaggatgcttgatatgggctttgaac 1106
>dbj|AP003244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01 Length = 149610 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 561 gatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||||||||| ||||| |||||||| ||||||| Sbjct: 43277 gatgaggcagaccggatgctggatatgggctttgaac 43241
>gb|AY786204.1| Monopterus albus DEAD box RNA helicase-PL10B mRNA, partial cds Length = 1127 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 549 taccttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 ||||| || |||||||||||||| |||||||| || ||||| ||||||| Sbjct: 571 tacctggtcctggatgaggcagatcgtatgcttgacatgggctttgaac 619
>ref|XM_550287.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2864 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 552 cttgtgctggatgaggcagaccgtatgctcgatatgggttttga 595 ||||| || |||||||| ||||| ||||| |||||||||||||| Sbjct: 1356 cttgttcttgatgaggctgaccgcatgcttgatatgggttttga 1399
>ref|XM_550286.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2127 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 552 cttgtgctggatgaggcagaccgtatgctcgatatgggttttga 595 ||||| || |||||||| ||||| ||||| |||||||||||||| Sbjct: 988 cttgttcttgatgaggctgaccgcatgcttgatatgggttttga 1031
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggttt 592 ||||| || ||||||||||||||||||||||| Sbjct: 912330 gatgaagccgaccgtatgctcgatatgggttt 912361
>gb|AC092238.2| Drosophila melanogaster clone BACR03D18, complete sequence Length = 184681 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Minus Query: 553 ttgtgctggatgaggcagaccgtatgctcgatatgggttt 592 |||||||||||||||| || || ||||| ||||||||||| Sbjct: 152 ttgtgctggatgaggccgatcgcatgctagatatgggttt 113
>ref|XM_504478.1| Yarrowia lipolytica CLIB122, YALI0E27715g predicted mRNA Length = 1659 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggttt 592 |||||||| ||||| ||||||||||||||||| Sbjct: 808 gatgaggccgaccgaatgctcgatatgggttt 839
>ref|NM_165103.2| Drosophila melanogaster vasa CG3506-RA (vas), mRNA Length = 2285 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 553 ttgtgctggatgaggcagaccgtatgctcgatatgggttt 592 |||||||||||||||| || || ||||| ||||||||||| Sbjct: 1338 ttgtgctggatgaggccgatcgcatgctagatatgggttt 1377
>gb|AY084126.1| Drosophila melanogaster RE20606 full insert cDNA Length = 2252 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 553 ttgtgctggatgaggcagaccgtatgctcgatatgggttt 592 |||||||||||||||| || || ||||| ||||||||||| Sbjct: 1333 ttgtgctggatgaggccgatcgcatgctagatatgggttt 1372
>gb|AC093101.1| Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR06I01, complete sequence Length = 175167 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 553 ttgtgctggatgaggcagaccgtatgctcgatatgggttt 592 |||||||||||||||| || || ||||| ||||||||||| Sbjct: 27903 ttgtgctggatgaggccgatcgcatgctagatatgggttt 27942
>gb|AE009543.1| Brucella melitensis 16M chromosome I, section 100 of 195 of the complete sequence Length = 14857 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 561 gatgaggcagaccgtatgctcgatatgggttt 592 ||||| || ||||||||||||||||||||||| Sbjct: 6366 gatgaagccgaccgtatgctcgatatgggttt 6335
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 552 cttgtgctggatgaggcagaccgtatgctcgatatgggttttga 595 ||||| || |||||||| ||||| ||||| |||||||||||||| Sbjct: 123634 cttgttcttgatgaggctgaccgcatgcttgatatgggttttga 123591
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggttt 592 ||||| || ||||||||||||||||||||||| Sbjct: 934021 gatgaagccgaccgtatgctcgatatgggttt 934052
>ref|XM_320481.2| Anopheles gambiae str. PEST ENSANGP00000015773 (ENSANGG00000013284), partial mRNA Length = 1587 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 546 acataccttgtgctggatgaggcagaccgtatgctcgatatggg 589 |||||||| |||||||||||||| ||||| ||||| || ||||| Sbjct: 736 acatacctcgtgctggatgaggccgaccggatgctggacatggg 779
>dbj|AK100326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079L21, full insert sequence Length = 2864 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 552 cttgtgctggatgaggcagaccgtatgctcgatatgggttttga 595 ||||| || |||||||| ||||| ||||| |||||||||||||| Sbjct: 1356 cttgttcttgatgaggctgaccgcatgcttgatatgggttttga 1399
>gb|AE003646.3| Drosophila melanogaster chromosome 2L, section 55 of 83 of the complete sequence Length = 265413 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 553 ttgtgctggatgaggcagaccgtatgctcgatatgggttt 592 |||||||||||||||| || || ||||| ||||||||||| Sbjct: 72956 ttgtgctggatgaggccgatcgcatgctagatatgggttt 72995
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggttt 592 ||||| || ||||||||||||||||||||||| Sbjct: 931143 gatgaagccgaccgtatgctcgatatgggttt 931174
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 561 gatgaggcagaccgtatgctcgatatgggttt 592 |||||||| ||||| ||||||||||||||||| Sbjct: 3273532 gatgaggccgaccgaatgctcgatatgggttt 3273501
>emb|X12946.1|DMVASA2 D.melanogaster vasa gene (exons 3 to 7) Length = 1904 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 553 ttgtgctggatgaggcagaccgtatgctcgatatgggttt 592 |||||||||||||||| || || ||||| ||||||||||| Sbjct: 864 ttgtgctggatgaggccgatcgcatgctagatatgggttt 903
>gb|M23560.1|DROVASA D.melanogaster antigen Mab46F11 (vasa) mRNA, complete cds Length = 2225 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 553 ttgtgctggatgaggcagaccgtatgctcgatatgggttt 592 |||||||||||||||| || || ||||| ||||||||||| Sbjct: 1279 ttgtgctggatgaggccgatcgcatgctagatatgggttt 1318
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 559 tggatgaggcagaccgtatgctcgatatgggtttt 593 |||||||||||||| | ||||| |||||||||||| Sbjct: 2367638 tggatgaggcagacagaatgctggatatgggtttt 2367672
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 559 tggatgaggcagaccgtatgctcgatatgggtttt 593 |||||||||||||| | ||||| |||||||||||| Sbjct: 2307879 tggatgaggcagacagaatgctggatatgggtttt 2307913
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 555 gtgctggatgaggcagaccgtatgctcgatatggg 589 ||||||||||| |||||||| ||||| |||||||| Sbjct: 3146658 gtgctggatgaagcagaccggatgctggatatggg 3146624
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 555 gtgctggatgaggcagaccgtatgctcgatatggg 589 ||||||||||| |||||||| ||||| |||||||| Sbjct: 387945 gtgctggatgaagcagaccgcatgctggatatggg 387911
>gb|AY730697.1| Nematostella vectensis DEAD box helicase Vasa2 (Vas2) mRNA, partial cds Length = 844 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 559 tggatgaggcagaccgtatgctcgatatgggttttgaac 597 ||||||| |||||||||||||| || ||||| ||||||| Sbjct: 315 tggatgaagcagaccgtatgctggacatgggctttgaac 353
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 555 gtgctggatgaggcagaccgtatgctcgatatgggtttt 593 |||||||||||||| |||||| |||| || ||||||||| Sbjct: 1177879 gtgctggatgaggctgaccgtttgctggagatgggtttt 1177917
>gb|BC086320.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, mRNA (cDNA clone IMAGE:6466882), partial cds Length = 2275 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 519 actggatctgggaaaacattatctta 544
>ref|NM_001016781.2| Xenopus tropicalis hypothetical protein LOC549535 (LOC549535), mRNA Length = 2430 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacg 454 |||||||| ||||| || ||||| |||||||||||||| Sbjct: 704 tgtatctatggtggggctcctaaaggaccacaaatacg 741
>gb|BC084159.1| Xenopus tropicalis cDNA clone IMAGE:7016603 Length = 4542 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacg 454 |||||||| ||||| || ||||| |||||||||||||| Sbjct: 704 tgtatctatggtggggctcctaaaggaccacaaatacg 741
>gb|BC080992.1| Xenopus laevis hypothetical protein LOC398649, mRNA (cDNA clone MGC:80019 IMAGE:3401294), complete cds Length = 2818 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacg 454 |||||||| ||||| || ||||| |||||||||||||| Sbjct: 672 tgtatctatggtggggctcctaaaggaccacaaatacg 709
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggttttg 594 ||||| || ||||||||||| ||||||||||||| Sbjct: 1292737 gatgaagctgaccgtatgctagatatgggttttg 1292770
>ref|NM_007840.2| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (Ddx5), mRNA Length = 3521 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 597 actggatctgggaaaacattatctta 622
>gb|BC054236.1| Xenopus laevis hypothetical protein LOC398649, mRNA (cDNA clone IMAGE:6880238), partial cds Length = 1336 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacg 454 |||||||| ||||| || ||||| |||||||||||||| Sbjct: 651 tgtatctatggtggggctcctaaaggaccacaaatacg 688
>gb|BC062916.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, mRNA (cDNA clone IMAGE:6827275), partial cds Length = 3645 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 581 actggatctgggaaaacattatctta 606
>ref|XM_946895.1| Theileria annulata strain Ankara ATP-dependent RNA helicase (TA14795) partial mRNA Length = 1368 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 330 ttgatccttgctccaacaagagaact 355 ||||||||||||||||| |||||||| Sbjct: 337 ttgatccttgctccaactagagaact 362
>ref|XM_967408.1| PREDICTED: Tribolium castaneum similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (LOC661233), mRNA Length = 1623 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 564 gaggcagaccgtatgctcgatatgggttttgaac 597 |||||||| || ||||| |||||||||||||||| Sbjct: 736 gaggcagatcggatgcttgatatgggttttgaac 769
>emb|X65627.1|MMHELI M.musculus mRNA TNZ2 for p68 RNA helicase Length = 2318 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 578 actggatctgggaaaacattatctta 603
>dbj|AK129022.1| Mus musculus cDNA fis, clone TRACH3036683, highly similar to Probable RNA-dependent helicase p68 Length = 3602 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 596 actggatctgggaaaacattatctta 621
>gb|AF479821.1| Hyphessobrycon ecuadoriensis DEAD box RNA helicase Vasa mRNA, complete cds Length = 1730 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 558 ctggatgaggcagaccgtatgctcgatatgggttttga 595 ||||||||||| || ||||||||||| ||||| ||||| Sbjct: 349 ctggatgaggctgatcgtatgctcgacatgggatttga 386
>dbj|AK132779.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4922505M03 product:DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, full insert sequence Length = 2375 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 643 actggatctgggaaaacattatctta 668
>dbj|AK135173.1| Mus musculus 12 days embryo female ovary cDNA, RIKEN full-length enriched library, clone:6620402N06 product:DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, full insert sequence Length = 3522 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 597 actggatctgggaaaacattatctta 622
>dbj|AK166698.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0003N03 product:DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, full insert sequence Length = 2461 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 729 actggatctgggaaaacattatctta 754
>dbj|AK166045.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730030M03 product:DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, full insert sequence Length = 3521 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 597 actggatctgggaaaacattatctta 622
>dbj|AB169223.1| Macaca fascicularis testis cDNA, clone: QtsA-18104, similar to human DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (DDX5), mRNA, RefSeq: NM_004396.2 Length = 2182 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Plus Query: 552 cttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 ||||| || ||||| |||||| | ||||| |||||||||||||||| Sbjct: 737 cttgtccttgatgaagcagacagaatgcttgatatgggttttgaac 782 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||| ||||| || || |||||||| ||||||||||| Sbjct: 602 tgtatctatggtggtgctcccaagggaccccaaatacgtga 642
>dbj|AB169157.1| Macaca fascicularis testis cDNA, clone: QtsA-17658, similar to human DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (DDX5), mRNA, RefSeq: NM_004396.2 Length = 2416 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Plus Query: 552 cttgtgctggatgaggcagaccgtatgctcgatatgggttttgaac 597 ||||| || ||||| |||||| | ||||| |||||||||||||||| Sbjct: 985 cttgtccttgatgaagcagacagaatgcttgatatgggttttgaac 1030 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacgtga 457 |||||||| ||||| || || |||||||| ||||||||||| Sbjct: 850 tgtatctatggtggtgctcccaagggaccccaaatacgtga 890
>dbj|AK088887.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430029P14 product:DEAD (aspartate-glutamate-alanine-aspartate) box polypeptide 5, full insert sequence Length = 2329 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 597 actggatctgggaaaacattatctta 622
>gb|DQ336393.1| Elephas maximus DEAD/H box polypeptide (DBY) gene, partial sequence Length = 458 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 342 ccaacaagagaactggctgttcaaat 367 |||||||||||||||||||| ||||| Sbjct: 284 ccaacaagagaactggctgtacaaat 309
>dbj|AK044792.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930106P08 product:DEAD (aspartate-glutamate-alanine-aspartate) box polypeptide 5, full insert sequence Length = 2329 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 596 actggatctgggaaaacattatctta 621
>dbj|AK076018.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610035N22 product:DEAD (aspartate-glutamate-alanine-aspartate) box polypeptide 5, full insert sequence Length = 2338 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 598 actggatctgggaaaacattatctta 623
>ref|XM_392069.2| PREDICTED: Apis mellifera similar to ENSANGP00000017814 (LOC408524), mRNA Length = 2743 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 559 tggatgaggcagaccgtatgctcgatatgggttttgaa 596 ||||||| || || |||||| ||||||||||||||||| Sbjct: 1778 tggatgaagcggatcgtatgatcgatatgggttttgaa 1815
>ref|NM_001007613.1| Rattus norvegicus ddx5 gene (Ddx5), mRNA Length = 2508 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 648 actggatctgggaaaacattatctta 673
>gb|BC079036.1| Rattus norvegicus ddx5 gene, mRNA (cDNA clone MGC:93965 IMAGE:7114313), complete cds Length = 2508 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 648 actggatctgggaaaacattatctta 673
>emb|AJ010940.1|RNO010940 Rattus norvegicus ddx5-ps1 pseudogene, partial Length = 336 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 264 actggatctgggaaaacattatctta 289
>emb|CR855694.2| Xenopus tropicalis finished cDNA, clone TGas068f07 Length = 2430 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 417 tgtatctacggtggagcacctaagggaccacaaatacg 454 |||||||| ||||| || ||||| |||||||||||||| Sbjct: 704 tgtatctatggtggggctcctaaaggaccacaaatacg 741
>gb|BC046554.1| Mus musculus cDNA clone IMAGE:4973650 Length = 2321 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 574 actggatctgggaaaacattatctta 599
>gb|BC108369.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, mRNA (cDNA clone MGC:118083 IMAGE:6312791), complete cds Length = 2236 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatctta 262 |||||||||||||||||| ||||||| Sbjct: 441 actggatctgggaaaacattatctta 466
>gb|AC149403.2| Phakopsora pachyrhizi clone JGIAFNA-61H19, complete sequence Length = 36597 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 315 gatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaaat 367 |||||||| ||||| |||||| | || || ||| | ||||||||||||||||| Sbjct: 23701 gatggccctattgtattgatcttagcacccacacgggaactggctgttcaaat 23649
>gb|AY391418.1| Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (DDX5) mRNA, complete cds Length = 2482 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 ccaacgcctatccaagctcagggttggcc 196 ||||| ||||||||||||||||| ||||| Sbjct: 417 ccaacccctatccaagctcaggggtggcc 445
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 564 gaggcagaccgtatgctcgatatgggttt 592 ||||||||||| |||||||| |||||||| Sbjct: 3430699 gaggcagaccggatgctcgacatgggttt 3430727
>ref|XM_629763.1| Dictyostelium discoideum hypothetical protein (DDB0184159), partial mRNA Length = 2334 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 473 tgaaatcgtcattgcaacaccaggtcggttgattgat 509 ||||||| ||||||||||||| ||||| ||| ||||| Sbjct: 1314 tgaaatcatcattgcaacaccgggtcgtttggttgat 1350
>ref|NM_212612.1| Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (ddx5), mRNA Length = 2482 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 ccaacgcctatccaagctcagggttggcc 196 ||||| ||||||||||||||||| ||||| Sbjct: 417 ccaacccctatccaagctcaggggtggcc 445
>gb|BC082849.1| Xenopus laevis p68 RNA helicase, mRNA (cDNA clone MGC:81559 IMAGE:6862986), complete cds Length = 2177 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 465 agaggagttgaaatcgtcattgcaacacc 493 ||||||||||||||| |||||||||||| Sbjct: 679 agaggagttgaaatctgcattgcaacacc 707
>gb|AE017136.1| Yersinia pestis biovar Medievalis str. 91001 section 10 of 16 of the complete genome Length = 290294 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 558 ctggatgaggcagaccgtatgctcgatatgggttttg 594 |||||||| || ||||||||||| || |||||||||| Sbjct: 168361 ctggatgaagctgaccgtatgctggacatgggttttg 168325
>gb|BC063223.1| Xenopus tropicalis DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, mRNA (cDNA clone MGC:76265 IMAGE:5379210), complete cds Length = 2192 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 429 ggagcacctaagggaccacaaatacgtgacctcaggagaggagttgaaatcgtcattgca 488 ||||| || ||||||||||| |||||||| || ||||||||||||||| |||||| Sbjct: 622 ggagctccaaagggaccacagatacgtgatctagaaagaggagttgaaatctgcattgct 681 Query: 489 acacc 493 ||||| Sbjct: 682 acacc 686
>ref|XM_361961.1| Magnaporthe grisea 70-15 hypothetical protein (MG04406.4) partial cds Length = 7962 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gaaactggatctgggaaaaca 254 ||||||||||||||||||||| Sbjct: 1288 gaaactggatctgggaaaaca 1308
>gb|DQ441593.1| Odontesthes hatcheri vasa-like protein mRNA, partial cds Length = 287 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 555 gtgctggatgaggcagaccgtatgctcgatatgggttttga 595 ||||||||||| ||||| || ||| | |||||||||||||| Sbjct: 192 gtgctggatgaagcagatcgcatgttggatatgggttttga 232
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 558 ctggatgaggcagaccgtatgctcgatatgggttttg 594 |||||||| || ||||||||||| || |||||||||| Sbjct: 1430731 ctggatgaagctgaccgtatgctggacatgggttttg 1430695
>ref|XM_456137.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F23716g predicted mRNA Length = 1665 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 311 aggtgatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaaat 367 ||||||||| |||||||| ||| | | |||||||| |||||| | ||||||||||| Sbjct: 549 aggtgatggtccaattgttttggtattggctccaaccagagaattagctgttcaaat 605
>gb|BC067585.1| Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, mRNA (cDNA clone MGC:85704 IMAGE:6963939), complete cds Length = 2245 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 ccaacgcctatccaagctcagggttggcc 196 ||||| ||||||||||||||||| ||||| Sbjct: 438 ccaacccctatccaagctcaggggtggcc 466
>gb|AC165060.2| Phakopsora pachyrhizi clone JGIAFNA-205B5, complete sequence Length = 44829 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 315 gatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaaat 367 |||||||| ||||| |||||| | || || ||| | ||||||||||||||||| Sbjct: 20583 gatggccctattgtattgatcttagcacccacacgggaactggctgttcaaat 20635
>gb|BC047981.1| Xenopus laevis similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase, 68kDa), mRNA (cDNA clone MGC:53795 IMAGE:5541855), complete cds Length = 2158 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 465 agaggagttgaaatcgtcattgcaacacc 493 ||||||||||||||| |||||||||||| Sbjct: 663 agaggagttgaaatctgcattgcaacacc 691
>ref|XM_719206.1| Plasmodium yoelii yoelii str. 17XNL U5 snRNP 100 kD protein (PY04051) partial mRNA Length = 2904 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 222 attggtattgcagaaactggatctgggaaaaca 254 ||||| ||||| |||||||||||||| |||||| Sbjct: 1750 attggaattgctgaaactggatctggaaaaaca 1782
>gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085C16, complete sequence Length = 156069 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggttttgaac 597 ||||||||||| | ||||| |||||||||||||||| Sbjct: 135169 gatgaggcagatagaatgcttgatatgggttttgaac 135205
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 561 gatgaggcagaccgtatgctcgatatggg 589 ||||| |||||||| |||||||||||||| Sbjct: 1814632 gatgaagcagaccgcatgctcgatatggg 1814604
>emb|Z71388.1|SCYNL112W S.cerevisiae chromosome XIV reading frame ORF YNL112w Length = 3740 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 339 gctccaacaagagaactggctgttcaaat 367 |||||||| |||||| ||||||||||||| Sbjct: 1016 gctccaactagagaattggctgttcaaat 1044
>emb|Z69382.1|SCCXIV38K S.cerevisiae 37,800 bp segment of chromosome XIV Length = 37800 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 339 gctccaacaagagaactggctgttcaaat 367 |||||||| |||||| ||||||||||||| Sbjct: 30156 gctccaactagagaattggctgttcaaat 30184
>emb|X52649.1|SCP68 S.cerevisiae p68 gene Length = 2733 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 339 gctccaacaagagaactggctgttcaaat 367 |||||||| |||||| ||||||||||||| Sbjct: 637 gctccaactagagaattggctgttcaaat 665
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggtttt 593 |||||||||||| | ||||| |||||||||||| Sbjct: 2284659 gatgaggcagacagaatgctggatatgggtttt 2284691
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 561 gatgaggcagaccgtatgctcgatatggg 589 ||||| |||||||||||||| |||||||| Sbjct: 2788064 gatgaagcagaccgtatgcttgatatggg 2788036
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 311 aggtgatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaaat 367 ||||||||| |||||||| ||| | | |||||||| |||||| | ||||||||||| Sbjct: 2217581 aggtgatggtccaattgttttggtattggctccaaccagagaattagctgttcaaat 2217525
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 558 ctggatgaggcagaccgtatgctcgatatgggttttg 594 |||||||| || ||||||||||| || |||||||||| Sbjct: 3431694 ctggatgaagctgaccgtatgctggacatgggttttg 3431730
>ref|NM_203898.1| Xenopus tropicalis DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (ddx5), mRNA Length = 2192 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 429 ggagcacctaagggaccacaaatacgtgacctcaggagaggagttgaaatcgtcattgca 488 ||||| || ||||||||||| |||||||| || ||||||||||||||| |||||| Sbjct: 622 ggagctccaaagggaccacagatacgtgatctagaaagaggagttgaaatctgcattgct 681 Query: 489 acacc 493 ||||| Sbjct: 682 acacc 686
>emb|AJ414153.1| Yersinia pestis strain CO92 complete genome; segment 13/20 Length = 258050 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 558 ctggatgaggcagaccgtatgctcgatatgggttttg 594 |||||||| || ||||||||||| || |||||||||| Sbjct: 122801 ctggatgaagctgaccgtatgctggacatgggttttg 122765
>emb|BX936324.6| Zebrafish DNA sequence from clone CH211-74F16 in linkage group 3, complete sequence Length = 154312 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 168 ccaacgcctatccaagctcagggttggcc 196 ||||| ||||||||||||||||| ||||| Sbjct: 58048 ccaacccctatccaagctcaggggtggcc 58020
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 42.1 bits (21), Expect = 2.1 Identities = 72/89 (80%) Strand = Plus / Plus Query: 504 attgatatgctggaagctggtcacacaaacctacgtcgggttacataccttgtgctggat 563 ||||||||||| || ||||| | ||| ||||| || || || || |||||||| || || Sbjct: 1421874 attgatatgctcgaggctggccgcactaacctccgccgtgtcacttaccttgttcttgac 1421933 Query: 564 gaggcagaccgtatgctcgatatgggttt 592 ||||| ||||| ||||| || |||||||| Sbjct: 1421934 gaggccgaccgcatgctggacatgggttt 1421962
>gb|AC118347.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0043E10, complete sequence Length = 124591 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 561 gatgaggcagaccgtatgctcgatatgggttttgaac 597 ||||||||||| | ||||| |||||||||||||||| Sbjct: 97495 gatgaggcagatagaatgcttgatatgggttttgaac 97459
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 553 ttgtgctggatgaggcagaccgtatgctcgatatggg 589 |||| ||||| || |||||||||||||| |||||||| Sbjct: 2372992 ttgttctggacgaagcagaccgtatgcttgatatggg 2372956 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 558 ctggatgaggcagaccgtatgctcgatatggg 589 ||||| || |||||||||||||| |||||||| Sbjct: 1026523 ctggacgaagcagaccgtatgcttgatatggg 1026492
>gb|AF218580.1|AF218580 Xenopus laevis p68 RNA helicase mRNA, complete cds Length = 2207 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 465 agaggagttgaaatcgtcattgcaacacc 493 ||||||||||||||| |||||||||||| Sbjct: 705 agaggagttgaaatctgcattgcaacacc 733
>ref|NM_065859.3| Caenorhabditis elegans F01F1.7 (F01F1.7) mRNA, complete cds Length = 2282 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 471 gttgaaatcgtcattgcaacaccaggtcg 499 |||||| | |||||||||||||||||||| Sbjct: 1286 gttgaagtggtcattgcaacaccaggtcg 1314
>gb|AF188678.1|AF188678 Pisum sativum P72 DEAD box protein mRNA, complete cds Length = 2924 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggttttgaac 597 |||||||||||| | ||||| || ||||||||||||| Sbjct: 1100 gatgaggcagacaggatgctggacatgggttttgaac 1136
>gb|AY960203.1| Odontesthes bonariensis Vasa-like protein mRNA, partial cds Length = 287 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 555 gtgctggatgaggcagaccgtatgctcgatatgggttttga 595 ||||||||||| ||||| || ||| | |||||||||||||| Sbjct: 192 gtgctggatgaagcagatcgcatgttggatatgggttttga 232
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 561 gatgaggcagaccgtatgctcgatatggg 589 ||||| |||||||||||||| |||||||| Sbjct: 2673286 gatgaagcagaccgtatgcttgatatggg 2673258
>dbj|AB051835.1| Oreochromis niloticus vas-s mRNA for vasa short form, complete cds Length = 2058 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 555 gtgctggatgaggcagaccgtatgctcgatatgggttttga 595 |||||||||||||| ||||| ||| | |||||||| ||||| Sbjct: 1062 gtgctggatgaggctgaccgcatgttggatatggggtttga 1102
>dbj|AB032467.1| Oreochromis niloticus mRNA for vasa, complete cds Length = 2130 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 555 gtgctggatgaggcagaccgtatgctcgatatgggttttga 595 |||||||||||||| ||||| ||| | |||||||| ||||| Sbjct: 1134 gtgctggatgaggctgaccgcatgttggatatggggtttga 1174
>emb|BX085195.5| Zebrafish DNA sequence from clone DKEY-226A5 in linkage group 3, complete sequence Length = 227111 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 ccaacgcctatccaagctcagggttggcc 196 ||||| ||||||||||||||||| ||||| Sbjct: 155137 ccaacccctatccaagctcaggggtggcc 155165
>gb|AY110750.1| Zea mays CL9052_1 mRNA sequence Length = 1387 Score = 42.1 bits (21), Expect = 2.1 Identities = 63/77 (81%) Strand = Plus / Minus Query: 315 gatggcccaattgtcttgatccttgctccaacaagagaactggctgttcaaatacaggca 374 ||||| |||||||||||| | | ||||| ||| | ||||| |||||||| |||||| | Sbjct: 1297 gatggtccaattgtcttggtgttagctcctacacgtgaacttgctgttcagatacagcaa 1238 Query: 375 gaagctacaaagtttgg 391 ||||| || |||||||| Sbjct: 1237 gaagcaaccaagtttgg 1221
>emb|CR848548.2| Xenopus tropicalis finished cDNA, clone TEgg028e13 Length = 2152 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 429 ggagcacctaagggaccacaaatacgtgacctcaggagaggagttgaaatcgtcattgca 488 ||||| || ||||||||||| |||||||| || ||||||||||||||| |||||| Sbjct: 631 ggagctccaaagggaccacagatacgtgatctagaaagaggagttgaaatctgcattgct 690 Query: 489 acacc 493 ||||| Sbjct: 691 acacc 695
>gb|U13070.1| Caenorhabditis elegans cosmid F01F1, complete sequence Length = 40824 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 471 gttgaaatcgtcattgcaacaccaggtcg 499 |||||| | |||||||||||||||||||| Sbjct: 9533 gttgaagtggtcattgcaacaccaggtcg 9505
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatggg 589 |||||||| ||||| |||||||||||||| Sbjct: 1238678 gatgaggctgaccggatgctcgatatggg 1238706
>gb|AC154130.1| Tribolium castaneum BAC T.cast_C11O3 (Clemson University Genomics Institute Tribolium castaneum BAC Library (Red Flour Beetle)) complete sequence Length = 148539 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 tgcagaaactggatctgggaaaac 253 |||| ||||||||||||||||||| Sbjct: 37474 tgcacaaactggatctgggaaaac 37497
>gb|AF510054.1| Schistocerca gregaria vasa-like gene, partial cds Length = 1764 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 561 gatgaggcagaccgtatgctcgatatgggttt 592 ||||| ||||| |||||||| ||||||||||| Sbjct: 973 gatgaagcagatcgtatgctagatatgggttt 1004
>ref|XM_635505.1| Dictyostelium discoideum hypothetical protein (DDB0204625), partial mRNA Length = 2352 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 gtcattgcaacaccaggtcg 499 |||||||||||||||||||| Sbjct: 943 gtcattgcaacaccaggtcg 962
>ref|NM_177069.2| Mus musculus RIKEN cDNA E330009P21 gene (E330009P21Rik), mRNA Length = 1487 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gatggcccaattgtcttgat 334 |||||||||||||||||||| Sbjct: 638 gatggcccaattgtcttgat 657
>gb|AY723847.1| Saccharomyces cerevisiae clone FLH004944.01X YLR276C gene, complete cds Length = 1785 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cttgctccaacaagagaactggct 359 |||| ||||||||||||||||||| Sbjct: 298 cttgttccaacaagagaactggct 321
>ref|XM_613184.2| PREDICTED: Bos taurus similar to Probable RNA-dependent helicase p68 (DEAD-box protein p68) (DEAD-box protein 5), transcript variant 1 (LOC533700), mRNA Length = 2468 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 aagggaccacaaatacgtga 457 |||||||||||||||||||| Sbjct: 921 aagggaccacaaatacgtga 940
>gb|BC068766.1| Xenopus laevis hypothetical protein MGC81281, mRNA (cDNA clone MGC:81281 IMAGE:6631829), complete cds Length = 3614 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gaaactggatctgggaaaac 253 |||||||||||||||||||| Sbjct: 458 gaaactggatctgggaaaac 477
>ref|NM_026360.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 (Ddx47), mRNA Length = 1752 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 gcagaaactggatctgggaaaaca 254 |||||||| ||||||||||||||| Sbjct: 225 gcagaaacgggatctgggaaaaca 248
>ref|NM_175214.3| Mus musculus kinesin family member 27 (Kif27), mRNA Length = 4462 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 aaactggatctgggaaaaca 254 |||||||||||||||||||| Sbjct: 254 aaactggatctgggaaaaca 273
>ref|XM_705616.1| Candida albicans SC5314 putative nonsense-mediated decay helicase Dbp2 (CaO19.171), mRNA Length = 1332 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 189 ggttggccgatggctttgaagggcagggacgtgattggtattgc 232 |||||||| |||||||||| || ||||| ||||||||||||| Sbjct: 469 ggttggcctatggctttgagtggtagggatatgattggtattgc 512
>ref|XM_705602.1| Candida albicans SC5314 putative nonsense-mediated decay helicase Dbp2 (CaO19.7804), mRNA Length = 1332 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 189 ggttggccgatggctttgaagggcagggacgtgattggtattgc 232 |||||||| |||||||||| || ||||| ||||||||||||| Sbjct: 469 ggttggcctatggctttgagtggtagggatatgattggtattgc 512
>ref|XM_816398.1| Trypanosoma cruzi strain CL Brener ATP-dependent DEAD/H RNA helicase (Tc00.1047053510187.290) partial mRNA Length = 1788 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 564 gaggcagaccgtatgctcgatatgggttttga 595 ||||| || ||||||||||||||||| ||||| Sbjct: 796 gaggccgatcgtatgctcgatatggggtttga 827
>gb|BC060168.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, mRNA (cDNA clone IMAGE:6826538), partial cds Length = 4039 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 gcagaaactggatctgggaaaaca 254 |||||||| ||||||||||||||| Sbjct: 212 gcagaaacgggatctgggaaaaca 235
>ref|XM_651823.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box helicase, putative (6.t00035) partial mRNA Length = 1608 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 ttggtattgcagaaactggatctgggaaaaca 254 ||||||||||||| |||||||| || |||||| Sbjct: 581 ttggtattgcagagactggatcaggtaaaaca 612
>ref|XM_759104.1| Theileria parva strain Muguga chromosome 4 RNA helicase (TP04_0562) partial mRNA Length = 1908 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 attgcagaaactggatctgg 247 |||||||||||||||||||| Sbjct: 757 attgcagaaactggatctgg 776
>gb|AY274092.1| Coccyzus erythropthalmus phosphoenolpyruvate carboxykinase (PEPCK) gene, exon 9, intron 9, exon 10 and partial cds Length = 658 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 430 gagcacctaagggaccacaaatac 453 ||||| |||||||||||||||||| Sbjct: 485 gagcagctaagggaccacaaatac 508
>emb|AL450389.12| Human DNA sequence from clone RP5-929G5 on chromosome 1 Contains the VANGL1 gene for vang-like 1 (van gogh, Drosophila), the 3' end of the CASQ2 gene for calsequestrin 2 (cardiac muscle) and one CpG island, complete sequence Length = 101623 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ggctgttcaaatacaggcag 375 |||||||||||||||||||| Sbjct: 48002 ggctgttcaaatacaggcag 48021
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 558 ctggatgaggcagaccgtatgctcgatatggg 589 ||||||||||||||||| ||||| || ||||| Sbjct: 1145913 ctggatgaggcagaccgcatgctggacatggg 1145882 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 558 ctggatgaggcagaccgtatgctcgatatggg 589 ||||||||||||||||| ||||| || ||||| Sbjct: 1002881 ctggatgaggcagaccgcatgctggacatggg 1002850
>ref|XM_505193.1| Yarrowia lipolytica CLIB122, YALI0F09141g predicted mRNA Length = 3660 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 tgaagggcagggacgtgattggta 228 ||||||||||||||| |||||||| Sbjct: 1018 tgaagggcagggacgagattggta 995
>emb|CR388143.6| Zebrafish DNA sequence from clone DKEY-189O20 in linkage group 21, complete sequence Length = 243457 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 agagaactggctgttcaaatacag 371 |||||||| ||||||||||||||| Sbjct: 118236 agagaacttgctgttcaaatacag 118213
>gb|AE008734.1| Salmonella typhimurium LT2, section 42 of 220 of the complete genome Length = 21522 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 558 ctggatgaggcagaccgtatgctcgatatggg 589 |||||||| || ||||||||||| |||||||| Sbjct: 608 ctggatgaagccgaccgtatgctggatatggg 639
>gb|BC099397.1| Mus musculus RIKEN cDNA E330009P21 gene, mRNA (cDNA clone MGC:117557 IMAGE:30936381), complete cds Length = 1497 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gatggcccaattgtcttgat 334 |||||||||||||||||||| Sbjct: 619 gatggcccaattgtcttgat 638
>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome Length = 1931047 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 558 ctggatgaggcagaccgtatgctcgatatggg 589 |||||||||||||| |||||| | |||||||| Sbjct: 1176903 ctggatgaggcagatcgtatgttagatatggg 1176872
>emb|AL627268.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 4/20 Length = 294050 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 558 ctggatgaggcagaccgtatgctcgatatggg 589 |||||||| || ||||||||||| |||||||| Sbjct: 90847 ctggatgaagccgaccgtatgctggatatggg 90878
>emb|AL162756.2|NMA5Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 5/7 Length = 329861 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 570 gaccgtatgctcgatatgggtttt 593 ||||||||||| |||||||||||| Sbjct: 207992 gaccgtatgctggatatgggtttt 208015
>gb|BC095944.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, mRNA (cDNA clone MGC:106325 IMAGE:4935970), complete cds Length = 1762 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 gcagaaactggatctgggaaaaca 254 |||||||| ||||||||||||||| Sbjct: 209 gcagaaacgggatctgggaaaaca 232
>emb|BX647482.1|HSM807628 Homo sapiens genomic DNA; cDNA DKFZp686L02110 (from clone DKFZp686L02110) Length = 8436 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gatggctttgaagggcaggg 216 |||||||||||||||||||| Sbjct: 2589 gatggctttgaagggcaggg 2608
>emb|AJ719824.1| Gallus gallus mRNA for hypothetical protein, clone 6o10 Length = 2510 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 gcagaaactggatctgggaaaaca 254 ||||||||||| |||||||||||| Sbjct: 224 gcagaaactggctctgggaaaaca 247
>ref|NM_001007853.1| Gallus gallus DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 (DDX47), mRNA Length = 2510 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 gcagaaactggatctgggaaaaca 254 ||||||||||| |||||||||||| Sbjct: 224 gcagaaactggctctgggaaaaca 247
>gb|AC105094.6| Homo sapiens chromosome 18, clone RP11-1096D5, complete sequence Length = 210317 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 caaatacgtgacctcaggag 466 |||||||||||||||||||| Sbjct: 102923 caaatacgtgacctcaggag 102942
>gb|AC110997.4| Homo sapiens chromosome 18, clone RP11-56J20, complete sequence Length = 160456 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 caaatacgtgacctcaggag 466 |||||||||||||||||||| Sbjct: 116420 caaatacgtgacctcaggag 116439
>dbj|AK136136.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420462A02 product:Similar to F-box protein FBX12 homolog [Mus musculus], full insert sequence Length = 1755 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gatggcccaattgtcttgat 334 |||||||||||||||||||| Sbjct: 634 gatggcccaattgtcttgat 653
>dbj|AK135949.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420440J21 product:Similar to F-box protein FBX12 homolog [Mus musculus], full insert sequence Length = 2244 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gatggcccaattgtcttgat 334 |||||||||||||||||||| Sbjct: 638 gatggcccaattgtcttgat 657
>gb|AC106746.2| Homo sapiens chromosome 5 clone RP11-149E17, complete sequence Length = 179868 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tacaaagtttggatcatact 399 |||||||||||||||||||| Sbjct: 173426 tacaaagtttggatcatact 173445
>gb|L80215.1|HUM69DC8Z Homo sapiens (subclone 1_a7 from P1 H69) DNA sequence Length = 3296 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tacaaagtttggatcatact 399 |||||||||||||||||||| Sbjct: 28 tacaaagtttggatcatact 47
>ref|NM_199036.1| Mus musculus F-box and WD-40 domain protein 15 (Fbxw15), mRNA Length = 1488 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gatggcccaattgtcttgat 334 |||||||||||||||||||| Sbjct: 637 gatggcccaattgtcttgat 656
>dbj|AK010310.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2400010F03 product:DEAD BOX PROTEIN homolog [Homo sapiens], full insert sequence Length = 1752 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 gcagaaactggatctgggaaaaca 254 |||||||| ||||||||||||||| Sbjct: 225 gcagaaacgggatctgggaaaaca 248
>gb|AC154437.2| Mus musculus BAC clone RP24-194D17 from chromosome 13, complete sequence Length = 180558 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 aaactggatctgggaaaaca 254 |||||||||||||||||||| Sbjct: 95822 aaactggatctgggaaaaca 95803
>dbj|AK087902.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330038M07 product:similar to F-box protein FBX12 (Fragment) [Mus musculus], full insert sequence Length = 910 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gatggcccaattgtcttgat 334 |||||||||||||||||||| Sbjct: 636 gatggcccaattgtcttgat 655
>gb|DQ067445.1| Mus musculus early ovarian protein-1 (Eop1) mRNA, complete cds Length = 1401 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gatggcccaattgtcttgat 334 |||||||||||||||||||| Sbjct: 604 gatggcccaattgtcttgat 623
>dbj|AK087710.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330009P21 product:similar to F-BOX PROTEIN FBX12 (FRAGMENT) [Mus musculus], full insert sequence Length = 1487 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gatggcccaattgtcttgat 334 |||||||||||||||||||| Sbjct: 638 gatggcccaattgtcttgat 657
>dbj|AK087669.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330001M05 product:similar to F-BOX PROTEIN FBX12 (FRAGMENT) [Mus musculus], full insert sequence Length = 1488 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gatggcccaattgtcttgat 334 |||||||||||||||||||| Sbjct: 637 gatggcccaattgtcttgat 656
>gb|BC103318.1| Bos taurus cDNA clone IMAGE:7941432, partial cds Length = 2409 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 aagggaccacaaatacgtga 457 |||||||||||||||||||| Sbjct: 790 aagggaccacaaatacgtga 809
>dbj|AK076982.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930588A18 product:DEAD BOX PROTEIN homolog [Homo sapiens], full insert sequence Length = 1748 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 gcagaaactggatctgggaaaaca 254 |||||||| ||||||||||||||| Sbjct: 217 gcagaaacgggatctgggaaaaca 240
>ref|NM_001039431.1| Tribolium castaneum vasa RNA helicase (vasa), mRNA Length = 2183 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 tgcagaaactggatctgggaaaac 253 |||| ||||||||||||||||||| Sbjct: 701 tgcacaaactggatctgggaaaac 724
>tpg|BK001056.1| TPA: TPA_exp: Mus musculus kinesin-related protein KIF27A mRNA, complete cds Length = 4462 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 aaactggatctgggaaaaca 254 |||||||||||||||||||| Sbjct: 254 aaactggatctgggaaaaca 273
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 570 gaccgtatgctcgatatgggtttt 593 ||||||||||| |||||||||||| Sbjct: 1457322 gaccgtatgctggatatgggtttt 1457345
>gb|AC147286.3| Pan troglodytes BAC clone RP43-75F15 from chromosome 7, complete sequence Length = 167461 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gatggctttgaagggcaggg 216 |||||||||||||||||||| Sbjct: 54303 gatggctttgaagggcaggg 54284
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 558 ctggatgaggcagaccgtatgctcgatatggg 589 |||||||| || ||||||||||| |||||||| Sbjct: 2014820 ctggatgaagccgaccgtatgctggatatggg 2014789
>dbj|AK196692.1| Mus musculus cDNA, clone:Y1G0122J24, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000032326, based on BLAT search Length = 387 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 gcagaaactggatctgggaaaaca 254 |||||||| ||||||||||||||| Sbjct: 151 gcagaaacgggatctgggaaaaca 174
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 ggaagctggtcacacaaacc 534 |||||||||||||||||||| Sbjct: 5296703 ggaagctggtcacacaaacc 5296722
>emb|AL731729.10| Mouse DNA sequence from clone RP23-92L12 on chromosome X, complete sequence Length = 216656 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tacaggcagaagctacaaag 386 |||||||||||||||||||| Sbjct: 146934 tacaggcagaagctacaaag 146953
>gb|AC005534.2|AC005534 Homo sapiens PAC clone RP5-982E9 from 7q35-q36, complete sequence Length = 158219 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gatggctttgaagggcaggg 216 |||||||||||||||||||| Sbjct: 85135 gatggctttgaagggcaggg 85154
>gb|AC131718.5| Mus musculus BAC clone RP23-171B16 from 6, complete sequence Length = 199299 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 gcagaaactggatctgggaaaaca 254 |||||||| ||||||||||||||| Sbjct: 196376 gcagaaacgggatctgggaaaaca 196353
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 558 ctggatgaggcagaccgtatgctcgatatggg 589 |||||||| || ||||||||||| |||||||| Sbjct: 2131230 ctggatgaagccgaccgtatgctggatatggg 2131199
>emb|AJ010934.1|RNO010934 Rattus norvegicus ddx5 gene, exons 2 to 5, partial Length = 894 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatct 260 |||||||||||||||||| ||||| Sbjct: 719 actggatctgggaaaacattatct 742
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 558 ctggatgaggcagaccgtatgctcgatatggg 589 |||||||| || ||||||||||| |||||||| Sbjct: 914644 ctggatgaagccgaccgtatgctggatatggg 914675
>gb|AY887136.1| Tribolium castaneum vasa RNA helicase mRNA, complete cds Length = 2183 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 tgcagaaactggatctgggaaaac 253 |||| ||||||||||||||||||| Sbjct: 701 tgcacaaactggatctgggaaaac 724
>gb|AC140287.3| Mus musculus BAC clone RP23-346L16 from 6, complete sequence Length = 213473 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 gcagaaactggatctgggaaaaca 254 |||||||| ||||||||||||||| Sbjct: 110852 gcagaaacgggatctgggaaaaca 110829
>gb|U17245.1|YSCL9328 Saccharomyces cerevisiae chromosome XII cosmid 9328 Length = 14827 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cttgctccaacaagagaactggct 359 |||| ||||||||||||||||||| Sbjct: 10486 cttgttccaacaagagaactggct 10463
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 tgaagggcagggacgtgattggta 228 ||||||||||||||| |||||||| Sbjct: 1276550 tgaagggcagggacgagattggta 1276527
>gb|L81906.1|HSL81906 Homo sapiens (subclone 2_f8 from P1 H69) DNA sequence, complete sequence Length = 4059 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tacaaagtttggatcatact 399 |||||||||||||||||||| Sbjct: 4006 tacaaagtttggatcatact 4025
>gb|AC001214.1|HSAC001214 Homo sapiens (subclone 1_a7 from P1 H69) DNA sequence, complete sequence Length = 3296 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tacaaagtttggatcatact 399 |||||||||||||||||||| Sbjct: 28 tacaaagtttggatcatact 47
>emb|AL606529.9| Human DNA sequence from clone RP4-744B2 on chromosome 1, complete sequence Length = 66822 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ggctgttcaaatacaggcag 375 |||||||||||||||||||| Sbjct: 15927 ggctgttcaaatacaggcag 15946
>emb|X94313.1|MMHLR1 M.musculus Hlr1 gene Length = 4670 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 actggatctgggaaaacactatct 260 |||||||||||||||||| ||||| Sbjct: 4078 actggatctgggaaaacattatct 4101
>dbj|D86601.1| Bombyx mori BmVLG mRNA, complete cds Length = 2790 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 558 ctggatgaggcagaccgtatgctcgatatggg 589 ||||||||||| ||||||||| | |||||||| Sbjct: 1096 ctggatgaggctgaccgtatgttagatatggg 1127
>dbj|AB048845.1| Aurelia aurita mRNA for PL10-related protein CnPL10, partial cds Length = 364 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cttgctccaacaagagaact 355 |||||||||||||||||||| Sbjct: 131 cttgctccaacaagagaact 150
>emb|AL603664.16| Mouse DNA sequence from clone RP23-247J12 on chromosome 11, complete sequence Length = 158098 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 actggatctgggaaaacactatct 260 |||||||||||||||||| ||||| Sbjct: 141812 actggatctgggaaaacattatct 141789 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,924,250 Number of Sequences: 3902068 Number of extensions: 3924250 Number of successful extensions: 90040 Number of sequences better than 10.0: 245 Number of HSP's better than 10.0 without gapping: 245 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 88917 Number of HSP's gapped (non-prelim): 1120 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)