>ATL1E_ARATH (Q9C7E9) Putative RING-H2 finger protein ATL1E|
          Length = 336

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
 Frame = +3

Query: 369 CVSNNASQFWYMAVSYAYISDLPRDCMAVSKGIPVPFTYDNHGPNYDYTFKANTVLNSGE 548
           C+SN+ S F +   +  +   LP  C  V KG+ VP          D  +K       G 
Sbjct: 124 CLSNSTSSF-FATSNLTFSKLLPPSCQIV-KGLYVPV---------DVIYKDVITEEKGF 172

Query: 549 TTFTWHFNNITDV----CQQCEHKGRHCGFSSQSN 641
           +T  W  N + +     C+ CE +   CGF ++++
Sbjct: 173 STVPWLGNVLLEWSSPNCRGCEKESLRCGFKNKAS 207

>ZAN_PIG (Q28983) Zonadhesin precursor|
          Length = 2476

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
 Frame = -3

Query: 164  R*LCRSQEHGDQGL-CHA-------QSMITACLGHHTMVGGSKAXXXXXXXGXIFAAPVG 9
            R L + +E G +G+ C +       +S +T   G HT+VGG +          +F AP G
Sbjct: 840  RVLVKKEERGQEGVSCLSKVYVTLPESTVTLLKGRHTLVGGQRVTLPAIPSRGVFLAPSG 899

Query: 8    R 6
            R
Sbjct: 900  R 900

>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor|
           (EGF-like domain-containing protein 5) (Multiple
           EGF-like domain protein 5)
          Length = 600

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = +3

Query: 285 SSREVMTMVRCSRDFTPVDQYRIVGPAS--CVS--NNASQFWYMAVSYAYISDLPRDCMA 452
           +S  + T   C     P+   +I  P S  C++  +N + FW       Y+ DL R+C+ 
Sbjct: 390 NSDSICTQCECHGHVDPIKTPKICKPESGECINCLHNTTGFWCEKCLEGYVRDLQRNCIK 449

Query: 453 VSKGIPVP 476
               +P P
Sbjct: 450 QEVIVPTP 457

>STC_DROME (P40798) Protein shuttle craft|
          Length = 1106

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 77  SCG-APGMQLSCSGHDTILDHHVLGSCRVTEXLLQAPCHQHHPTCG 211
           SCG A G  L C GH  I   H  G C+    + +  C +  PTCG
Sbjct: 833 SCGMACGKPLPCGGHKCIKPCHE-GPCQSAGEICRQSCTKPRPTCG 877

>V2A_PSVJ (P28727) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)|
          Length = 834

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 36/165 (21%), Positives = 66/165 (40%)
 Frame = +3

Query: 78  RVVPQACSYHALGMTQSLITMFLAPAELPXIYYRHRVINIIPLVEPSTQCPFQKLISANL 257
           R VP   ++HA G+T     +F++  E      R RV+  +  +       F  L    L
Sbjct: 442 RPVPATITFHAKGITSQFSPLFISLFERFQRCLRGRVVVPVGKISSLEMDNFSVLNKHCL 501

Query: 258 ATDVYKQPQSSREVMTMVRCSRDFTPVDQYRIVGPASCVSNNASQFWYMAVSYAYISDLP 437
             D+ K  +S  E+  M+          Q  I+    C   + S++W     Y+YI D  
Sbjct: 502 EIDLSKFDKSQGELHLMI----------QEEILNLLGC-PVDISKWWCDFHRYSYIKD-- 548

Query: 438 RDCMAVSKGIPVPFTYDNHGPNYDYTFKANTVLNSGETTFTWHFN 572
                   G+ +P ++     +  +T+  NT++      F+W ++
Sbjct: 549 -----KRAGVSMPISFQRRTGD-AFTYFGNTLVTM--ALFSWCYD 585

>COX3_PAPHA (Q9ZXX8) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide III)
          Length = 261

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
 Frame = +1

Query: 229 HFRSSSQQT*QLMCTNNLNHHEKL*PWY--VVQEISHQ*INTV**AQPLVSVTTLANSGI 402
           HF S++  T  L+ TN L  ++    W+  +++E ++Q  +T         V      G+
Sbjct: 36  HFYSTALLTLGLL-TNVLTMYQ----WWRDIIRESTYQGHHTT-------PVQKSLRYGM 83

Query: 403 WRYLMHTYLIFHGTAWLFLKAS--PYPSLMIIMAPTMITPSRQIQSSTLERQHLLGTSIT 576
             +++     F G  W F  +S  P P L     PT ITP   ++   L    LL + +T
Sbjct: 84  TLFIISEVFFFAGFFWAFYHSSLAPTPRLGCHWPPTGITPLNPLEVPLLNTSVLLASGVT 143

Query: 577 LLMSANSV 600
           +  + +S+
Sbjct: 144 ITWAHHSL 151

>ATS10_MOUSE (P58459) ADAMTS-10 (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 10)
           (ADAM-TS 10) (ADAM-TS10) (Fragment)
          Length = 450

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 90  QACSYHALG-MTQSLITMFLAPAELPXIYYR 179
           QA S  ALG +  SLI M LA AELP ++YR
Sbjct: 130 QAQSLEALGPINASLIIMVLAQAELPALHYR 160

>G59B_DROER (Q8I1F0) Putative gustatory receptor 59b|
          Length = 587

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
 Frame = -3

Query: 527 ICLEGVIIVGAMIIISEGYGDAFRNSHA-------------VPWKIRYVCIRYRHIPELA 387
           I +  +++    +++  GY   F  ++A             V W++R V +  RH P+L 
Sbjct: 285 IVVHSIMLFQFHLVMRGGYTTLFSRTYALLANIITLTMLPIVMWQVRSVFLAKRHYPQLI 344

Query: 386 SVVTDTRGWAYYTVLIY 336
            +  D R    + +++Y
Sbjct: 345 LITNDIRYTVSFLIILY 361

>NAS28_CAEEL (P98061) Zinc metalloproteinase nas-28 precursor (EC 3.4.24.21)|
           (Nematode astacin 28)
          Length = 497

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
 Frame = +3

Query: 339 DQYRIVGPASCVSNNASQFWYMAVSYAYISDLPRDCMAVSKGIPVPFTYDNHGPNYDYTF 518
           D Y  V  ++ + + A  F  MAV  A + +LP D  +V +  P  F  D+    Y    
Sbjct: 232 DNYVYVDFSNIIPSQAYNFQKMAVDQAQLLNLPYDYGSVMQYYPYAFAVDS--SKYTILA 289

Query: 519 KANTVLNSGETTFTWHFNNITDV------CQQC--EHKGRHCGFSSQSN 641
           K N   NS        F++I  V        QC  + K  +CG +   N
Sbjct: 290 KENGFQNSMGQREAPAFSDIIGVNKLYNCTSQCKIQMKCSNCGITDSRN 338

>V2A_CMVK (Q86783) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)|
          Length = 858

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 36/165 (21%), Positives = 60/165 (36%)
 Frame = +3

Query: 78  RVVPQACSYHALGMTQSLITMFLAPAELPXIYYRHRVINIIPLVEPSTQCPFQKLISANL 257
           R VP   +YH  G+T     +F A  E      R R+I  +  +       F       L
Sbjct: 455 RPVPATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCL 514

Query: 258 ATDVYKQPQSSREVMTMVRCSRDFTPVDQYRIVGPASCVSNNASQFWYMAVSYAYISDLP 437
             D+ K  +S  E   M+          Q  I+    C +   +++W     ++YI D  
Sbjct: 515 EIDLSKFDKSQGEFHLMI----------QEHILNGLGCPA-PITKWWCDFHRFSYIRD-- 561

Query: 438 RDCMAVSKGIPVPFTYDNHGPNYDYTFKANTVLNSGETTFTWHFN 572
                   G+P+ F          +T+  NT++   E  F W ++
Sbjct: 562 ---RRAGVGMPISF---QRRTGDAFTYFGNTIVTMAE--FAWCYD 598

>V2A_CMVIX (Q66117) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)|
          Length = 858

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 37/165 (22%), Positives = 60/165 (36%)
 Frame = +3

Query: 78  RVVPQACSYHALGMTQSLITMFLAPAELPXIYYRHRVINIIPLVEPSTQCPFQKLISANL 257
           R VP   +YH  G+T     +F A  E      R RVI  +  +       F       L
Sbjct: 455 RPVPATITYHKKGITSQFSPLFTALFERFQRCLRERVILPVGKISSLEMSGFDVKNKYCL 514

Query: 258 ATDVYKQPQSSREVMTMVRCSRDFTPVDQYRIVGPASCVSNNASQFWYMAVSYAYISDLP 437
             D+ K  +S  E   M+          Q  I+    C +   +++W     ++YI D  
Sbjct: 515 EIDLSKFDKSQGEFHLMI----------QEHILNGLGCPA-PITKWWCDFHRFSYIRD-- 561

Query: 438 RDCMAVSKGIPVPFTYDNHGPNYDYTFKANTVLNSGETTFTWHFN 572
                   G+P+ F          +T+  NT++   E  F W ++
Sbjct: 562 ---RRAGVGMPISF---QRRTGDAFTYFGNTIVTMAE--FAWCYD 598

>DICER_HUMAN (Q9UPY3) Endoribonuclease Dicer (EC 3.1.26.-) (Helicase with RNase|
            motif) (Helicase-MOI)
          Length = 1912

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 483  YDNHGPNYDYTFKANTVLNSGETTFTWHFNNITDVCQQCEHKG 611
            ++N     +Y FK    L    T  ++H+N ITD  Q+ E  G
Sbjct: 1656 FENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLG 1698

>V2A_CMVNT (O40977) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)|
          Length = 857

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 36/165 (21%), Positives = 60/165 (36%)
 Frame = +3

Query: 78  RVVPQACSYHALGMTQSLITMFLAPAELPXIYYRHRVINIIPLVEPSTQCPFQKLISANL 257
           R VP   +YH  G+T     +F A  E      R R+I  +  +       F       L
Sbjct: 455 RPVPATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCL 514

Query: 258 ATDVYKQPQSSREVMTMVRCSRDFTPVDQYRIVGPASCVSNNASQFWYMAVSYAYISDLP 437
             D+ K  +S  E   M+          Q  I+    C +   +++W     ++YI D  
Sbjct: 515 EIDLSKFDKSQGEFHLMI----------QEHILNGLGCPA-PITKWWCDFHRFSYIRD-- 561

Query: 438 RDCMAVSKGIPVPFTYDNHGPNYDYTFKANTVLNSGETTFTWHFN 572
                   G+P+ F          +T+  NT++   E  F W ++
Sbjct: 562 ---RRAGVGMPISF---QRRTGDAFTYFGNTIVTMAE--FAWCYD 598


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,680,747
Number of Sequences: 219361
Number of extensions: 2028114
Number of successful extensions: 5375
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5375
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)