ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalo21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY054380.1| Hordeum patagonicum clone HpaLTR-INS Sukkula retr... 192 7e-46
2gb|AY054379.1| Hordeum murinum clone HmuLTR-INS Sukkula retrotra... 167 4e-38
3gb|AY054378.1| Hordeum vulgare clone HmaLTR-INS Sukkula retrotra... 167 4e-38
4gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic prote... 94 5e-16
5gb|AF453665.1| Hordeum vulgare isolate HV Sukkula retrotransposo... 90 7e-15
6gb|AY054377.1| Hordeum vulgare clone LTR-INS1 Sukkula retrotrans... 90 7e-15
7gb|AY054376.1| Hordeum vulgare Sukkula retrotransposon long term... 90 7e-15
8gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, comple... 88 3e-14
9gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complet... 88 3e-14
10emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H 88 3e-14
11gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones B... 80 7e-12
12gb|AF509775.1| Hordeum vulgare subsp. vulgare isolate RSB409A Rp... 80 7e-12
13gb|AF509774.1| Hordeum vulgare subsp. vulgare isolate RSB347 Rpg... 80 7e-12
14gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, ... 80 7e-12
15gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14... 72 2e-09
16gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC cl... 70 7e-09
17gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 ge... 68 3e-08
18gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones B... 64 4e-07
19gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial c... 60 7e-06
20gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, c... 58 3e-05
21gb|AY375391.1| Triticum monococcum clone pTm4-P1 A-genome repeti... 52 0.002
22gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene lo... 52 0.002
23gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, geno... 52 0.002
24gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 50 0.006
25gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carbo... 50 0.006
26gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A1... 46 0.100
27emb|CT025649.7| Mouse DNA sequence from clone RP24-345B5 on chro... 42 1.6
28emb|AL139120.6| Human DNA sequence from clone RP11-25C19 on chro... 42 1.6
29gb|AC154612.2| Mus musculus BAC clone RP23-338A21 from chromosom... 42 1.6
30gb|AC159260.3| Mus musculus BAC clone RP24-85M18 from chromosome... 40 6.2
31gb|AC026471.6| Homo sapiens chromosome 16 clone RP11-452L6, comp... 40 6.2
32gb|AC108409.8| Mus musculus chromosome 19, clone RP23-84G7, comp... 40 6.2
33emb|AL031599.1|HS15D23 Human DNA sequence from clone RP1-15D23 o... 40 6.2
34gb|AC007372.4|AC007372 Homo sapiens chromosome 14 BAC containing... 40 6.2
35emb|AL049837.4|CNS0000F Human chromosome 14 DNA sequence BAC R-9... 40 6.2 
>gb|AY054380.1| Hordeum patagonicum clone HpaLTR-INS Sukkula retrotransposon long
            terminal repeat, complete sequence
          Length = 7731

 Score =  192 bits (97), Expect = 7e-46
 Identities = 217/249 (87%), Gaps = 8/249 (3%)
 Strand = Plus / Plus

                                                                        
Query: 156  gtctacttcacggattcgntcttcttccatgctggatc-caggcaatatgatc-atttcc 213
            |||| ||||||||||||| |||||||||| || ||||| ||||||| |||| | ||||||
Sbjct: 2746 gtcttcttcacggattcgttcttcttccaagcgggatctcaggcaagatgacccatttcc 2805

                                                                        
Query: 214  ctatataccagtactatcattgctatgctagntgtgtcagttctatcgctatgtctcgct 273
            ||  |||||| |||||||||||| ||||||| ||| ||  ||||||||||  ||||||||
Sbjct: 2806 ctggataccattactatcattgccatgctagttgtctcgtttctatcgct--gtctcgct 2863

                                                                        
Query: 274  atctaccacctgttatgtcaagcctccctacatttccatgaaaagcctctaacccctcca 333
            | ||||||| ||| |||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct: 2864 acctaccac-tgt-atgtcaagcctcccaa-attgccatgaaaagcctctaacccctcca 2920

                                                                        
Query: 334  catccgagcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgttn 393
             |||| ||||||| || |||||||||||||||||||||||  ||||||||||||||||| 
Sbjct: 2921 gatcccagcaaacatt-gtttggctatgttactgcttgctcagcccttcttatagcgttg 2979

                     
Query: 394  ccagttgca 402
            | |||||||
Sbjct: 2980 ctagttgca 2988
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>gb|AY054379.1| Hordeum murinum clone HmuLTR-INS Sukkula retrotransposon long
            terminal repeat, complete sequence
          Length = 7586

 Score =  167 bits (84), Expect = 4e-38
 Identities = 232/276 (84%), Gaps = 6/276 (2%)
 Strand = Plus / Plus

                                                                        
Query: 128  gtgaggattcattcaactacgtcagtttgtctacttcacggattcgntcttcttccatgc 187
            |||||||||| ||| |||||||  ||| || |||||||||| |||| |||||||||| ||
Sbjct: 2516 gtgaggattcgttcgactacgttggttcgtttacttcacggtttcgttcttcttccaagc 2575

                                                                        
Query: 188  tggatc-caggcaatatgatcatttccctatataccagtactatcattgctatgctagnt 246
             ||||| | ||||| ||||||||||||||  |||||| |||||||||||| ||||||| |
Sbjct: 2576 gggatctcgggcaagatgatcatttccctggataccattactatcattgccatgctagtt 2635

                                                                        
Query: 247  gtgtcagttctatcgctatgtctcgctatctaccacctgttatgtcaagcctccctacat 306
            || ||| | ||||| ||  ||||||||| ||||||| |||  || |||||||||| | | 
Sbjct: 2636 gtttcattgctatcact--gtctcgctacctaccacttgtg-tgccaagcctcccaa-ag 2691

                                                                        
Query: 307  ttccatgaaaagcctctaacccctccacatccgagcaaacctttgtttggctatgttact 366
            | |||||||||||||||||||||||||| ||  ||||||| || ||||||||||||||| 
Sbjct: 2692 tgccatgaaaagcctctaacccctccacgtctcagcaaacatt-gtttggctatgttacc 2750

                                                
Query: 367  gcttgcttggcccttcttatagcgttnccagttgca 402
            |||||||  |||||||||||||| || | |||||||
Sbjct: 2751 gcttgctcagcccttcttatagcattgctagttgca 2786
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>gb|AY054378.1| Hordeum vulgare clone HmaLTR-INS Sukkula retrotransposon long
            terminal repeat, complete sequence
          Length = 7919

 Score =  167 bits (84), Expect = 4e-38
 Identities = 173/202 (85%), Gaps = 1/202 (0%)
 Strand = Plus / Plus

                                                                        
Query: 218  ataccagtactatcattgctatgctagntgtgtcagttctatcgctatgtctcgctatct 277
            |||||| |||||||||||||||||||| |||     ||||| || ||||||| |||| ||
Sbjct: 2896 ataccactactatcattgctatgctagttgtcctgcttctaccgttatgtcttgctacct 2955

                                                                        
Query: 278  accacctgttatgtcaagcctccctacatttccatgaaaagcctctaacccctccacatc 337
            ||||| |||| |||| |||||||| ||||| |||||| ||||||||| ||||| ||||||
Sbjct: 2956 accacttgtt-tgtcgagcctcccaacattgccatgataagcctctagccccttcacatc 3014

                                                                        
Query: 338  cgagcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgttnccag 397
            | |||||||||||||||||||||||||| |||||||   |||||||||||||||| | ||
Sbjct: 3015 ccagcaaacctttgtttggctatgttaccgcttgctcaacccttcttatagcgtttctag 3074

                                  
Query: 398  ttgcaagtgtagttgcttccat 419
             |||| ||| ||||||||||||
Sbjct: 3075 ctgcaggtgcagttgcttccat 3096
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>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast
            intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes,
            complete cds
          Length = 65979

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                        
Query: 353  ttggctatgttactgcttgcttggcccttcttatagcgttnccagttgcaagtgtagttg 412
            ||||||||||||||||||||||  ||||  | |||||||| | ||||||| ||| |||||
Sbjct: 9693 ttggctatgttactgcttgcttaaccctgttgatagcgttgctagttgcaggtgcagttg 9752

                                                      
Query: 413  cttccatatgaaacatggatttcttgatatatcacaatatta 454
            ||||||| |||||||||| || |||| |||||||| ||||||
Sbjct: 9753 cttccatgtgaaacatgggttccttgttatatcaccatatta 9794



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/103 (84%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                        
Query: 143  actacgtcagtttgtctacttcacggattcgntcttcttccatgctggatc-caggcaat 201
            |||||||| ||| |||| |||||||||  |  || ||||||| || ||||| ||||||| 
Sbjct: 9484 actacgtcggttcgtctgcttcacggaggcattcctcttccaagcgggatctcaggcaag 9543

                                                       
Query: 202  atgatcatttccctatataccagtactatcattgctatgctag 244
            ||||||||||||| | |||||| |||||||||||| |||||||
Sbjct: 9544 atgatcatttccccagataccattactatcattgccatgctag 9586
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>gb|AF453665.1| Hordeum vulgare isolate HV Sukkula retrotransposon, partial sequence
          Length = 7674

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 136/163 (83%), Gaps = 3/163 (1%)
 Strand = Plus / Plus

                                                                        
Query: 128  gtgaggattcattcaactacgtcagtttgtctacttcacggattcgntcttcttccatgc 187
            ||||||| || ||| |||||||| ||| |||| |||||||||  |  |||||||||| ||
Sbjct: 2586 gtgaggactcgttcgactacgtcggttcgtctgcttcacggaggcattcttcttccaagc 2645

                                                                        
Query: 188  tggatc-caggcaatatgatcatttccctatataccagtactatcattgctatgctagnt 246
             ||||| ||||||| ||||||||||||| | |||||| |||||||||||| ||||||| |
Sbjct: 2646 gggatctcaggcaagatgatcatttccccagataccattactatcattgccatgctagtt 2705

                                                       
Query: 247  gtgtcagttctatcg-ctatgtctcgctatctaccacctgtta 288
             | ||  |||||||| |||||||||| |  |||||||||||||
Sbjct: 2706 -tatcgcttctatcgtctatgtctcgttgcctaccacctgtta 2747



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 92/109 (84%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                        
Query: 340  agcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgttnccagtt 399
            ||||||||  || ||||||||||||||||||||||  ||||  | |||||||| | ||||
Sbjct: 2796 agcaaaccactgattggctatgttactgcttgcttaaccctgttgatagcgttgctagtt 2855

                                                             
Query: 400  gcaagtgtagttgcttccatatgaaa-catggatttcttgatatatcac 447
            ||| ||| |||||||||||| ||||| ||||| || |||| ||||||||
Sbjct: 2856 gcaggtgcagttgcttccatgtgaaagcatgggttccttgttatatcac 2904
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>gb|AY054377.1| Hordeum vulgare clone LTR-INS1 Sukkula retrotransposon long terminal
            repeat, complete sequence
          Length = 7575

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 136/163 (83%), Gaps = 3/163 (1%)
 Strand = Plus / Plus

                                                                        
Query: 128  gtgaggattcattcaactacgtcagtttgtctacttcacggattcgntcttcttccatgc 187
            ||||||| || ||| |||||||| ||| |||| |||||||||  |  |||||||||| ||
Sbjct: 2586 gtgaggactcgttcgactacgtcggttcgtctgcttcacggaggcattcttcttccaagc 2645

                                                                        
Query: 188  tggatc-caggcaatatgatcatttccctatataccagtactatcattgctatgctagnt 246
             ||||| ||||||| ||||||||||||| | |||||| |||||||||||| ||||||| |
Sbjct: 2646 gggatctcaggcaagatgatcatttccccagataccattactatcattgccatgctagtt 2705

                                                       
Query: 247  gtgtcagttctatcg-ctatgtctcgctatctaccacctgtta 288
             | ||  |||||||| |||||||||| |  |||||||||||||
Sbjct: 2706 -tatcgcttctatcgtctatgtctcgttgcctaccacctgtta 2747



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 92/109 (84%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                        
Query: 340  agcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgttnccagtt 399
            ||||||||  || ||||||||||||||||||||||  ||||  | |||||||| | ||||
Sbjct: 2796 agcaaaccactgattggctatgttactgcttgcttaaccctgttgatagcgttgctagtt 2855

                                                             
Query: 400  gcaagtgtagttgcttccatatgaaa-catggatttcttgatatatcac 447
            ||| ||| |||||||||||| ||||| ||||| || |||| ||||||||
Sbjct: 2856 gcaggtgcagttgcttccatgtgaaagcatgggttccttgttatatcac 2904
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>gb|AY054376.1| Hordeum vulgare Sukkula retrotransposon long terminal repeat, partial
            and complete sequences
          Length = 11820

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 136/163 (83%), Gaps = 3/163 (1%)
 Strand = Plus / Plus

                                                                        
Query: 128  gtgaggattcattcaactacgtcagtttgtctacttcacggattcgntcttcttccatgc 187
            ||||||| || ||| |||||||| ||| |||| |||||||||  |  |||||||||| ||
Sbjct: 2586 gtgaggactcgttcgactacgtcggttcgtctgcttcacggaggcattcttcttccaagc 2645

                                                                        
Query: 188  tggatc-caggcaatatgatcatttccctatataccagtactatcattgctatgctagnt 246
             ||||| ||||||| ||||||||||||| | |||||| |||||||||||| ||||||| |
Sbjct: 2646 gggatctcaggcaagatgatcatttccccagataccattactatcattgccatgctagtt 2705

                                                       
Query: 247  gtgtcagttctatcg-ctatgtctcgctatctaccacctgtta 288
             | ||  |||||||| |||||||||| |  |||||||||||||
Sbjct: 2706 -tatcgcttctatcgtctatgtctcgttgcctaccacctgtta 2747



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 92/109 (84%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                        
Query: 340  agcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgttnccagtt 399
            ||||||||  || ||||||||||||||||||||||  ||||  | |||||||| | ||||
Sbjct: 2796 agcaaaccactgattggctatgttactgcttgcttaaccctgttgatagcgttgctagtt 2855

                                                             
Query: 400  gcaagtgtagttgcttccatatgaaa-catggatttcttgatatatcac 447
            ||| ||| |||||||||||| ||||| ||||| || |||| ||||||||
Sbjct: 2856 gcaggtgcagttgcttccatgtgaaagcatgggttccttgttatatcac 2904



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 62/71 (87%), Gaps = 1/71 (1%)
 Strand = Plus / Plus

                                                                         
Query: 175   tcttcttccatgctggatc-caggcaatatgatcatttccctatataccagtactatcat 233
             |||||||||| || ||||| || |||| ||||||||||||| | |||||| |||||||||
Sbjct: 10164 tcttcttccaagcgggatctcacgcaagatgatcatttccccagataccattactatcat 10223

                        
Query: 234   tgctatgctag 244
             ||| |||||||
Sbjct: 10224 tgccatgctag 10234



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 340   agcaaacctttgtttggctatgttactgcttgctt 374
             ||||||||  || ||||||||||||||||||||||
Sbjct: 10328 agcaaaccactgattggctatgttactgcttgctt 10362
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>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 97/115 (84%)
 Strand = Plus / Minus

                                                                         
Query: 340   agcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgttnccagtt 399
             ||||||||  || ||||||||||||||||||||||  ||||  | |||||||| | ||||
Sbjct: 66247 agcaaaccactgattggctatgttactgcttgcttcaccctgttgatagcgttgctagtt 66188

                                                                    
Query: 400   gcaagtgtagttgcttccatatgaaacatggatttcttgatatatcacaatatta 454
             ||| ||| |||||||||||| |||||||||| || ||||  ||||||| ||||||
Sbjct: 66187 gcaggtgcagttgcttccatgtgaaacatgggttccttgtcatatcaccatatta 66133



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 86/103 (83%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                         
Query: 143   actacgtcagtttgtctacttcacggattcgntcttcttccatgctggatc-caggcaat 201
             |||||||| ||| |||| |||||||||  |  |||||||||| || ||||| ||||||| 
Sbjct: 66443 actacgtcggttcgtctgcttcacggaggcattcttcttccaagcaggatctcaggcaag 66384

                                                        
Query: 202   atgatcatttccctatataccagtactatcattgctatgctag 244
             |||| |||||||| | ||| || |||||||||||| |||||||
Sbjct: 66383 atgaccatttccccagatatcattactatcattgccatgctag 66341
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>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/103 (86%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                          
Query: 143    actacgtcagtttgtctacttcacggattcgntcttcttccatgctggatc-caggcaat 201
              |||||||| ||| |||| ||||||||| | | |||||||||| || ||||| ||||||| 
Sbjct: 104394 actacgtcggttcgtctgcttcacggagttgttcttcttccaggcgggatctcaggcaag 104335

                                                         
Query: 202    atgatcatttccctatataccagtactatcattgctatgctag 244
              |||||||||| |||| |||||| |||||||||||| |||||||
Sbjct: 104334 atgatcattttcctagataccattactatcattgccatgctag 104292



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/115 (82%), Gaps = 1/115 (0%)
 Strand = Plus / Minus

                                                                          
Query: 340    agcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgttnccagtt 399
              ||||||||  || ||||||||||||| ||||||||  ||||  | |||||||| | ||||
Sbjct: 104198 agcaaaccactgattggctatgttaccgcttgcttaaccctgttgatagcgttgctagtt 104139

                                                                     
Query: 400    gcaagtgtagttgcttccatatg-aaacatggatttcttgatatatcacaatatt 453
              ||| ||| || ||||||||| || |||||||| || |||| |||||||| |||||
Sbjct: 104138 gcaggtgcagatgcttccatgtgaaaacatgggttccttgttatatcaccatatt 104084
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>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H
          Length = 59748

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/103 (86%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                         
Query: 143   actacgtcagtttgtctacttcacggattcgntcttcttccatgctggatc-caggcaat 201
             |||||||||||| |||| |||||||||  |  |||||||||| || ||||| ||||||| 
Sbjct: 38890 actacgtcagttcgtctgcttcacggaggcattcttcttccaagcgggatctcaggcaag 38831

                                                        
Query: 202   atgatcatttccctatataccagtactatcattgctatgctag 244
             ||||||||||||| | |||||| |||||||||||| |||||||
Sbjct: 38830 atgatcatttccccagataccattactatcattgccatgctag 38788



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                         
Query: 340   agcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgttnccagtt 399
             ||||||||  || ||||||||||||||||||||||  ||||  | ||||||||   ||||
Sbjct: 38694 agcaaaccactgattggctatgttactgcttgcttaaccctgttgatagcgttgttagtt 38635

                                 
Query: 400   gcaagtgtagttgcttccat 419
             ||| ||| ||||||||||||
Sbjct: 38634 gcaggtgcagttgcttccat 38615
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>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness
             locus region
          Length = 129099

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 88/103 (85%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                         
Query: 143   actacgtcagtttgtctacttcacggattcgntcttcttccatgctggatc-caggcaat 201
             |||||||| ||| |||| |||||||||  |  |||||||||| || ||||| ||||||| 
Sbjct: 69742 actacgtcggttcgtctgcttcacggaggcattcttcttccaagcgggatctcaggcaag 69683

                                                        
Query: 202   atgatcatttccctatataccagtactatcattgctatgctag 244
             ||||||||||||| | |||||| |||||||||||| |||||||
Sbjct: 69682 atgatcatttccccagataccattactatcattgccatgctag 69640



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                         
Query: 340   agcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgttnccagtt 399
             ||||||||  || |||| |||||||||||||||||  ||||  | |||||||| | ||||
Sbjct: 69545 agcaaaccactgattggttatgttactgcttgcttaaccctgttgatagcgttgctagtt 69486

                                 
Query: 400   gcaagtgtagttgcttccat 419
             ||| ||| ||||||||||||
Sbjct: 69485 gcaggtgcagttgcttccat 69466
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>gb|AF509775.1| Hordeum vulgare subsp. vulgare isolate RSB409A Rpg1 region, genomic
            sequence
          Length = 7321

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 111/134 (82%), Gaps = 1/134 (0%)
 Strand = Plus / Plus

                                                                        
Query: 156  gtctacttcacggattcgntcttcttccatgctggatc-caggcaatatgatcatttccc 214
            |||| ||||||||||||| |||||||||| || ||||| |||| || |||| ||||||||
Sbjct: 6053 gtctgcttcacggattcgttcttcttccaagcaggatctcaggaaagatgaccatttccc 6112

                                                                        
Query: 215  tatataccagtactatcattgctatgctagntgtgtcagttctatcgctatgtctcgcta 274
               ||| || |||||||||||| ||| ||| ||| ||  |||||||||||||||||| | 
Sbjct: 6113 ccgatatcattactatcattgccatgttagttgtctcgcttctatcgctatgtctcgttg 6172

                          
Query: 275  tctaccacctgtta 288
             ||||||| |||||
Sbjct: 6173 cctaccacatgtta 6186
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>gb|AF509774.1| Hordeum vulgare subsp. vulgare isolate RSB347 Rpg1 region, genomic
           sequence
          Length = 3124

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 111/134 (82%), Gaps = 1/134 (0%)
 Strand = Plus / Plus

                                                                       
Query: 156 gtctacttcacggattcgntcttcttccatgctggatc-caggcaatatgatcatttccc 214
           |||| ||||||||||||| |||||||||| || ||||| |||| || |||| ||||||||
Sbjct: 824 gtctgcttcacggattcgttcttcttccaagcaggatctcaggaaagatgaccatttccc 883

                                                                       
Query: 215 tatataccagtactatcattgctatgctagntgtgtcagttctatcgctatgtctcgcta 274
              ||| || |||||||||||| ||| ||| ||| ||  |||||||||||||||||| | 
Sbjct: 884 ccgatatcattactatcattgccatgttagttgtctcgcttctatcgctatgtctcgttg 943

                         
Query: 275 tctaccacctgtta 288
            ||||||| |||||
Sbjct: 944 cctaccacatgtta 957
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>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence
          Length = 439641

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 97/115 (84%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                          
Query: 340    agcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgttnccagtt 399
              ||||||||  || ||||||||||||||||||||||  ||||  | |||||||| | ||||
Sbjct: 177520 agcaaaccactgattggctatgttactgcttgcttaaccctgttgatagcgttgctagtt 177579

                                                                     
Query: 400    gcaagtgtagttgcttccatatg-aaacatggatttcttgatatatcacaatatt 453
              ||| ||| |||||||||||| || |||||||| || |||| |||||||| |||||
Sbjct: 177580 gcaggtgcagttgcttccatgtgaaaacatgggttccttgttatatcaccatatt 177634



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/103 (84%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                          
Query: 143    actacgtcagtttgtctacttcacggattcgntcttcttccatgctggatc-caggcaat 201
              |||||||  ||| |||||||||||||| | | |||||||||| |  ||||| ||||||| 
Sbjct: 325545 actacgttggttcgtctacttcacggagttgttcttcttccaagtgggatctcaggcaag 325604

                                                         
Query: 202    atgatcatttccctatataccagtactatcattgctatgctag 244
              |||| |||||||| | |||||| |||||||||||| |||||||
Sbjct: 325605 atgaccatttccccagataccattactatcattgccatgctag 325647



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 84/99 (84%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                          
Query: 356    gctatgttactgcttgcttggcccttcttatagcgttnccagttgcaagtgtagttgctt 415
              |||||||||||||||||||  ||||  | |||||||| | ||||||| ||| ||||||||
Sbjct: 130203 gctatgttactgcttgcttaaccctgttgatagcgttgctagttgcaggtgcagttgctt 130262

                                                     
Query: 416    ccatatg-aaacatggatttcttgatatatcacaatatt 453
              |||| || |||||||| || |||| |||||||| |||||
Sbjct: 130263 ccatgtgaaaacatgggttccttgttatatcaccatatt 130301



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 98/118 (83%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                          
Query: 128    gtgaggattcattcaactacgtcagtttgtctacttcacggattcgntcttcttccatgc 187
              |||||||  ||||| |||||||| ||| || | |||||||||  |  |||||||||| ||
Sbjct: 177308 gtgaggacccattcgactacgtcggttcgtgttcttcacggagacattcttcttccaagc 177367

                                                                        
Query: 188    tggatc-caggcaatatgatcatttccctatataccagtactatcattgctatgctag 244
               ||||| ||||||| |||| |||||||| | |||||| |||||||||||| |||||||
Sbjct: 177368 gggatctcaggcaagatgaccatttccccagataccattactatcattgccatgctag 177425



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/103 (82%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                          
Query: 143    actacgtcagtttgtctacttcacggattcgntcttcttccatgctggatc-caggcaat 201
              |||||||| ||| || | |||||||||  |  |||||||||| || ||||| ||||||| 
Sbjct: 129990 actacgtcggttcgtgtgcttcacggagacattcttcttccaagcgggatctcaggcaag 130049

                                                         
Query: 202    atgatcatttccctatataccagtactatcattgctatgctag 244
              |||| |||||||  | |||||| |||||||||||| |||||||
Sbjct: 130050 atgaccatttccacagataccattactatcattgccatgctag 130092
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>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 166/202 (82%), Gaps = 6/202 (2%)
 Strand = Plus / Plus

                                                                         
Query: 128   gtgaggattcattcaactacgtcagtttgtctacttcacggattcgntcttcttccatgc 187
             |||||||| ||||| |||||||| |||||||||||||| ||| ||| ||||||||| |||
Sbjct: 73347 gtgaggatccattcgactacgtccgtttgtctacttcatggactcgttcttcttccttgc 73406

                                                                         
Query: 188   tgga-tccaggcaatatgatcatttccctatataccagtactatcattgctatgctagnt 246
              ||| | ||||||| |||| || | ||||  | | || | ||||| ||||| |||||| |
Sbjct: 73407 gggatttcaggcaagatgacca-taccctcgaaatcacttctatctttgct-tgctagtt 73464

                                                                         
Query: 247   gtgtcagttctatcgctatgtctcgctatctaccacctgttatgtcaagcctccctacat 306
             || ||| |||||||||||||||  |||| ||||||| |||||| ||| ||||||| | ||
Sbjct: 73465 gt-tca-ttctatcgctatgtcaagctacctaccacttgttatatcatgcctccc-atat 73521

                                   
Query: 307   ttccatgaaaagcctctaaccc 328
             | |||||  |||||||||||||
Sbjct: 73522 tgccatgtcaagcctctaaccc 73543
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>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete
             sequence
          Length = 113510

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 63/71 (88%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                         
Query: 175   tcttcttccatgctggatc-caggcaatatgatcatttccctatataccagtactatcat 233
             |||||||||| || ||||| ||||||| ||||||||||||| | |||||| |||||||||
Sbjct: 17940 tcttcttccaagcgggatctcaggcaagatgatcatttccccagataccattactatcat 17881

                        
Query: 234   tgctatgctag 244
             ||| |||||||
Sbjct: 17880 tgccatgctag 17870
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>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence
          Length = 215241

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 50/54 (92%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                   
Query: 340   agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatagcgtt 392
             |||||||| |||||||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 84107 agcaaaccgttgtttggctatgttactgctttgcttagcccctcttatagcgtt 84160



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 45/50 (90%), Gaps = 1/50 (2%)
 Strand = Plus / Plus

                                                                
Query: 340    agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatag 388
              |||||||| ||||||||||||||||| || |||||| |||| ||||||||
Sbjct: 100649 agcaaaccgttgtttggctatgttaccgctttgcttagcccctcttatag 100698
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>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness
            locus region
          Length = 160897

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 86/103 (83%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                        
Query: 143  actacgtcagtttgtctacttcacggattcgntcttcttccatgctggatc-caggcaat 201
            |||||||| ||| |||| |||||||||  |  |||||||||| || ||||| ||||||| 
Sbjct: 4913 actacgtcggttcgtctgcttcacggaggcattcttcttccaagcgggatctcaggcaag 4854

                                                       
Query: 202  atgatcatttccctatataccagtactatcattgctatgctag 244
            | ||||||||||| | |||||| ||||||||| || |||||||
Sbjct: 4853 aggatcatttccccagataccattactatcatcgccatgctag 4811



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/115 (82%), Gaps = 1/115 (0%)
 Strand = Plus / Minus

                                                                        
Query: 340  agcaaacctttgtttggctatgttactgcttgcttggcccttcttatagcgttnccagtt 399
            ||||||||  |||||||||||||||||||||||||  ||||  | |||||||| | ||||
Sbjct: 4717 agcaaaccactgtttggctatgttactgcttgcttaaccctgttgatagcgttgctagtt 4658

                                                                   
Query: 400  gcaagtgtagttgcttccatatgaaacatggatttcttgatatatcacaatatta 454
            || || | ||||||||||||   || ||||| || |||| |||||||| ||||||
Sbjct: 4657 gc-agggcagttgcttccatgcaaagcatgggttccttgttatatcaccatatta 4604
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>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome
              condensation factor (CCF), putative resistance protein
              (RGA-2), putative resistance protein (RGA2) and putative
              nodulin-like-like protein (NLL) gene, complete cds; and
              retrotransposons Josephine, Angela-2, Angela-4, Heidi,
              Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5,
              Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                          
Query: 128    gtgaggattcattcaactacgtcagtttgtctacttcacggattcgntcttcttccatgc 187
              |||||||| | ||| |||||||| |||||||||||||| ||| ||| ||||||||| |||
Sbjct: 194973 gtgaggatccgttcgactacgtccgtttgtctacttcatggactcgttcttcttccttgc 194914

                   
Query: 188    tggat 192
               ||||
Sbjct: 194913 gggat 194909



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 130/162 (80%), Gaps = 6/162 (3%)
 Strand = Plus / Minus

                                                                          
Query: 253    gttctatcgctatgtctcgctatctaccacctgttatgtcaagcctccctacatttccat 312
              ||||||||||||||||  |||| ||||||| |||||| ||| ||||| | | ||| ||||
Sbjct: 194851 gttctatcgctatgtcaagctacctaccacttgttatatcatgcctctc-atattgccat 194793

                                                                          
Query: 313    gaaaagcctctaacccctccacatccgagcaaacctttgtttggctatgttactgc--tt 370
              |  ||| |||||||||  |    ||| |||||||| ||||||||||||||||| ||  ||
Sbjct: 194792 gtcaagtctctaacccacct---tcctagcaaaccgttgtttggctatgttaccgctttt 194736

                                                        
Query: 371    gcttggcccttcttatagcgttnccagttgcaagtgtagttg 412
              |||  |||| ||||||||||||   ||||||| ||| |||||
Sbjct: 194735 gctcagcccctcttatagcgttgttagttgcaggtgaagttg 194694



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                 
Query: 340    agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatagc 389
              |||||||| ||| ||||||||||||| || |||||  ||||||||||||||
Sbjct: 126876 agcaaaccattgattggctatgttaccgctttgctcagcccttcttatagc 126826



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                 
Query: 340    agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatagc 389
              |||||||| ||| ||||||||||||| || |||||  ||||||||||||||
Sbjct: 105777 agcaaaccattgattggctatgttaccgctttgctcagcccttcttatagc 105727
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>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence
          Length = 111912

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/64 (87%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                         
Query: 340   agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatagcgttnccagt 398
             |||||||| ||||||||||||||||| || |||||  |||| |||||||||||| | |||
Sbjct: 28551 agcaaaccgttgtttggctatgttaccgctttgctcagcccctcttatagcgttgctagt 28492

                 
Query: 399   tgca 402
             ||||
Sbjct: 28491 tgca 28488
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>gb|AY375391.1| Triticum monococcum clone pTm4-P1 A-genome repetitive DNA sequence
          Length = 3244

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 48/54 (88%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                  
Query: 340  agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatagcgtt 392
            |||||||| ||||||||||||||||| || |||||  |||| ||||||||||||
Sbjct: 1141 agcaaaccgttgtttggctatgttaccgctttgctcagcccctcttatagcgtt 1194
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>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence
          Length = 307015

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 48/54 (88%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                    
Query: 340    agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatagcgtt 392
              |||||||| ||| ||||||||||||| || |||||  |||||||||||||||||
Sbjct: 283321 agcaaaccgttgattggctatgttaccgctttgctcagcccttcttatagcgtt 283374



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 48/54 (88%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                    
Query: 340    agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatagcgtt 392
              |||||||| ||| ||||||||||||| || |||||  |||||||||||||||||
Sbjct: 273807 agcaaaccgttgattggctatgttaccgctttgctcagcccttcttatagcgtt 273860



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/64 (85%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                        
Query: 340  agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatagcgttnccagt 398
            |||||||| ||| ||||||||||||| || |||||  |||| |||||||||||| | |||
Sbjct: 4288 agcaaaccattgattggctatgttaccgctttgctcagcccctcttatagcgttgctagt 4229

                
Query: 399  tgca 402
            ||||
Sbjct: 4228 tgca 4225
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>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 48/54 (88%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 340  agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatagcgtt 392
            |||||||| ||||||||||||||||| || |||||  |||| ||||||||||||
Sbjct: 1007 agcaaaccgttgtttggctatgttaccgctttgctcagcccctcttatagcgtt 954



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 56/65 (86%), Gaps = 2/65 (3%)
 Strand = Plus / Minus

                                                                          
Query: 340    agcaaacctttgtttggctatgttactgc-ttgct-tggcccttcttatagcgttnccag 397
              |||||||| ||| ||||||||||||| || |||||  | |||||||||||||||| | ||
Sbjct: 126460 agcaaaccgttgattggctatgttaccgctttgctcagccccttcttatagcgttgctag 126401

                   
Query: 398    ttgca 402
              |||||
Sbjct: 126400 ttgca 126396



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 340  agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatagcgtt 392
            |||||| | ||||||||||||||||| || |||||  |||| ||||||||||||
Sbjct: 8597 agcaaatcgttgtttggctatgttaccgctttgctcagcccctcttatagcgtt 8544
to top
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/64 (85%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                          
Query: 340    agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatagcgttnccagt 398
              |||||||| ||| ||||||||||||| || |||||  |||| |||||||||||| | |||
Sbjct: 108867 agcaaaccgttgattggctatgttaccgctttgctcagcccctcttatagcgttgctagt 108926

                  
Query: 399    tgca 402
              ||||
Sbjct: 108927 tgca 108930



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 47/54 (87%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                    
Query: 340    agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatagcgtt 392
              |||||||| ||| ||||||||||||| || |||||  |||| ||||||||||||
Sbjct: 152474 agcaaaccgttgattggctatgttaccgctttgctcagcccctcttatagcgtt 152421



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 56/65 (86%), Gaps = 2/65 (3%)
 Strand = Plus / Plus

                                                                         
Query: 340   agcaaacctttgtttggctatgttactgctt-gcttggccc-ttcttatagcgttnccag 397
             |||||||| ||| ||||||||||||| |||| |||  |||| ||||||||||||| | ||
Sbjct: 65456 agcaaaccattgattggctatgttaccgctttgctcagccccttcttatagcgttgctag 65515

                  
Query: 398   ttgca 402
             |||||
Sbjct: 65516 ttgca 65520



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 56/65 (86%), Gaps = 2/65 (3%)
 Strand = Plus / Plus

                                                                         
Query: 340   agcaaacctttgtttggctatgttactgctt-gcttggccc-ttcttatagcgttnccag 397
             |||||||| ||| ||||||||||||| |||| |||  |||| ||||||||||||| | ||
Sbjct: 46963 agcaaaccgttgattggctatgttaccgctttgctcagccccttcttatagcgttgctag 47022

                  
Query: 398   ttgca 402
             |||||
Sbjct: 47023 ttgca 47027
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>gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carboxylase (Acc-1,1) gene,
            nuclear gene encoding plastid protein, partial cds
          Length = 9285

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/64 (85%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                        
Query: 340  agcaaacctttgtttggctatgttactgc-ttgcttggcccttcttatagcgttnccagt 398
            |||||||| ||||||||||||||||| || |||||  |||| ||||||||| || | |||
Sbjct: 1130 agcaaaccgttgtttggctatgttaccgctttgctcagcccctcttatagcattgctagt 1189

                
Query: 399  tgca 402
            ||||
Sbjct: 1190 tgca 1193
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>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence
          Length = 133625

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                
Query: 343   aaacctttgtttggctatgttactgc-ttgcttggcccttcttatagcgtt 392
             ||||| ||||||||||||||||| || |||||  |||| ||||||||||||
Sbjct: 85657 aaaccgttgtttggctatgttaccgctttgctcagcccctcttatagcgtt 85607
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>emb|CT025649.7| Mouse DNA sequence from clone RP24-345B5 on chromosome 14, complete
             sequence
          Length = 175794

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 335   atccgagcaaacctttgtttg 355
             |||||||||||||||||||||
Sbjct: 67050 atccgagcaaacctttgtttg 67030
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>emb|AL139120.6| Human DNA sequence from clone RP11-25C19 on chromosome 10 Contains the
             3' end of the VTI1A  gene for vesicle transport through
             interaction with t-SNAREs homolog 1A (yeast), a novel gene
             and the 5' end of a novel gene, complete sequence
          Length = 169775

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 416   ccatatgaaacatggatttct 436
             |||||||||||||||||||||
Sbjct: 31884 ccatatgaaacatggatttct 31864
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>gb|AC154612.2| Mus musculus BAC clone RP23-338A21 from chromosome 14, complete sequence
          Length = 197282

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 335    atccgagcaaacctttgtttg 355
              |||||||||||||||||||||
Sbjct: 134551 atccgagcaaacctttgtttg 134531
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>gb|AC159260.3| Mus musculus BAC clone RP24-85M18 from chromosome 3, complete sequence
          Length = 208348

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    gaaaagcctctaacccctcc 332
              ||||||||||||||||||||
Sbjct: 117119 gaaaagcctctaacccctcc 117100
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>gb|AC026471.6| Homo sapiens chromosome 16 clone RP11-452L6, complete sequence
          Length = 186860

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 90     ccagaccaggcacaagtagttctgaacc 117
              |||||||||| ||| |||||||||||||
Sbjct: 161974 ccagaccaggtacaggtagttctgaacc 161947
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>gb|AC108409.8| Mus musculus chromosome 19, clone RP23-84G7, complete sequence
          Length = 270854

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    tatataccagtactatcatt 234
              ||||||||||||||||||||
Sbjct: 112105 tatataccagtactatcatt 112124
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>emb|AL031599.1|HS15D23 Human DNA sequence from clone RP1-15D23 on chromosome 1q24-25 Contains
              the TNFSF18 gene for tumor necrosis factor (ligand)
              superfamily member 18, complete sequence
          Length = 163136

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 431    atttcttgatatatcacaatatta 454
              |||||||| |||||||||||||||
Sbjct: 127191 atttcttgctatatcacaatatta 127214
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>gb|AC007372.4|AC007372 Homo sapiens chromosome 14 BAC containing gene for type 2 iodothyronine
             deiodinase (DIO2) gene, complete CDS, complete sequence
          Length = 154796

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   atcatttccctatataccag 224
             ||||||||||||||||||||
Sbjct: 40200 atcatttccctatataccag 40219
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>emb|AL049837.4|CNS0000F Human chromosome 14 DNA sequence BAC R-959A22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168677

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    atcatttccctatataccag 224
              ||||||||||||||||||||
Sbjct: 134951 atcatttccctatataccag 134932


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,350,586
Number of Sequences: 3902068
Number of extensions: 3350586
Number of successful extensions: 66028
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 65900
Number of HSP's gapped (non-prelim): 103
length of query: 457
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 435
effective length of database: 17,147,199,772
effective search space: 7459031900820
effective search space used: 7459031900820
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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