Clone Name | baalo19 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | FTSK_LACPL (Q88V72) DNA translocase ftsK | 30 | 4.2 | 2 | CABIN_RAT (O88480) Calcineurin-binding protein Cabin 1 (Calcineu... | 30 | 7.1 | 3 | COX10_MAGGR (P0C150) Protoheme IX farnesyltransferase, mitochond... | 30 | 7.1 | 4 | ADA15_HUMAN (Q13444) ADAM 15 precursor (EC 3.4.24.-) (A disinteg... | 29 | 9.3 | 5 | RL4B_ARATH (Q9SF40) 60S ribosomal protein L4-2 (L1) | 29 | 9.3 | 6 | IWS1_YARLI (Q6CGB2) Transcription factor IWS1 | 29 | 9.3 |
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>FTSK_LACPL (Q88V72) DNA translocase ftsK| Length = 802 Score = 30.4 bits (67), Expect = 4.2 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 Query: 163 PXGSVTMSSAPWSTSSGTVXPAEVLLQVRSQPEDL 59 P +V S+AP T+SGT P V S P DL Sbjct: 247 PTSTVPQSAAPAETTSGTSAPDSAASAVTSSPADL 281
>CABIN_RAT (O88480) Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor)| (CAIN) Length = 2182 Score = 29.6 bits (65), Expect = 7.1 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = -2 Query: 342 LPHPTDRPARDGSDPGAQPVDDVAQ-HRLLLGLD 244 LPHP P DGS PG +P V H+L + D Sbjct: 1703 LPHPKKLPLADGSGPGPEPGGKVGPLHQLPVATD 1736
>COX10_MAGGR (P0C150) Protoheme IX farnesyltransferase, mitochondrial precursor| (EC 2.5.1.-) (Heme O synthase) Length = 552 Score = 29.6 bits (65), Expect = 7.1 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = +1 Query: 322 PVRGMRQAGRITSAELVGDGRNLPSPTVMTRPVRPPAPLASEDGE 456 P RQA R T+ + N PS T PV PP A+ GE Sbjct: 137 PPHRRRQAARRTAEQAASASSNAPSEAAQTTPVTPPP--AAPSGE 179
>ADA15_HUMAN (Q13444) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 15) (Metalloproteinase-like, disintegrin-like, and cysteine-rich protein 15) (MDC-15) (Metalloprotease RGD disintegrin protein) (Metargidin) Length = 814 Score = 29.3 bits (64), Expect = 9.3 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +1 Query: 316 RRPVRGMRQAGRITSAELVGDGRNLPSPTVMTRPVRPPAPLAS 444 R+P+ Q GR S +L G G +P V +RP PP ++S Sbjct: 770 RKPLPADPQ-GRCPSGDLPGPGAGIPPLVVPSRPAPPPPTVSS 811
>RL4B_ARATH (Q9SF40) 60S ribosomal protein L4-2 (L1)| Length = 406 Score = 29.3 bits (64), Expect = 9.3 Identities = 19/53 (35%), Positives = 31/53 (58%) Frame = +1 Query: 226 LLHDLLIEPEKEAVLGDIVDWLRPRI*SITRRPVRGMRQAGRITSAELVGDGR 384 +L D++ P V DIV+++ +I + +R+P ++AG TSAE G GR Sbjct: 28 VLPDVMTAP----VRPDIVNFVHAQISNNSRQPYAVSKKAGHQTSAESWGTGR 76
>IWS1_YARLI (Q6CGB2) Transcription factor IWS1| Length = 414 Score = 29.3 bits (64), Expect = 9.3 Identities = 15/55 (27%), Positives = 25/55 (45%) Frame = -2 Query: 372 DELGRSDPTRLPHPTDRPARDGSDPGAQPVDDVAQHRLLLGLDEEVVQQAVVEPD 208 +++G + P + PA + A P DD L LDE+ ++ A +E D Sbjct: 32 EDVGEAAEEASEAPEEAPAEAATTTEAAPADDDEDDSDLSDLDEDEIKNAAIEDD 86 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,650,515 Number of Sequences: 219361 Number of extensions: 1207482 Number of successful extensions: 4645 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4296 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4637 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)