ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalo15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483360.1| Oryza sativa (japonica cultivar-group), mRNA 416 e-113
2dbj|AK121539.1| Oryza sativa (japonica cultivar-group) cDNA clon... 416 e-113
3dbj|AK064999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 416 e-113
4gb|AY105814.1| Zea mays PCO145471 mRNA sequence 252 1e-63
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 180 4e-42
6dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic D... 180 4e-42
7dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic D... 180 4e-42
8dbj|D21293.1|RICSS412 Oryza sativa SS412 mRNA for pumilo protein... 135 2e-28
9gb|AF153276.1|AF153276 Populus tremula x Populus tremuloides pum... 78 4e-11
10ref|NM_111871.2| Arabidopsis thaliana RNA binding AT3G10360 mRNA... 70 9e-09
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 70 9e-09
12emb|BX824616.1|CNS0A4VA Arabidopsis thaliana Full-length cDNA Co... 70 9e-09
13gb|BT005311.1| Arabidopsis thaliana At3g10360 mRNA, complete cds 70 9e-09
14dbj|AK117911.1| Arabidopsis thaliana At3g10360 mRNA for putative... 70 9e-09
15dbj|AK070870.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 9e-09
16ref|NM_202889.2| Arabidopsis thaliana RNA binding AT4G25880 tran... 56 1e-04
17ref|NM_001036643.1| Arabidopsis thaliana RNA binding AT4G25880 t... 56 1e-04
18ref|NM_118721.2| Arabidopsis thaliana RNA binding AT4G25880 tran... 56 1e-04
19gb|AY133866.1| Arabidopsis thaliana clone U09349 putative pumili... 56 1e-04
20gb|AF360298.1| Arabidopsis thaliana putative pumilio protein (At... 56 1e-04
21emb|BX826676.1|CNS0A36J Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
22ref|NM_190576.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
24dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
25dbj|AK103686.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
26dbj|AK102882.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
27dbj|AK099801.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
28ref|XM_474813.1| Oryza sativa (japonica cultivar-group), predic... 50 0.009
29ref|XM_706368.1| Candida albicans SC5314 hypothetical protein (C... 50 0.009
30ref|XM_706351.1| Candida albicans SC5314 hypothetical protein (C... 50 0.009
31ref|NM_112916.3| Arabidopsis thaliana RNA binding AT3G20250 mRNA... 48 0.034
32emb|BX824276.1|CNS0A7RW Arabidopsis thaliana Full-length cDNA Co... 48 0.034
33gb|AY179886.1| Schistocerca americana pumilio RBD (pum) mRNA, pa... 48 0.034
34ref|XM_515319.1| PREDICTED: Pan troglodytes similar to Pum2 prot... 46 0.13
35ref|XM_457992.1| Debaryomyces hansenii CBS767 hypothetical prote... 46 0.13
36gb|BC024218.2| Homo sapiens pumilio homolog 2 (Drosophila), mRNA... 46 0.13
37emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS... 46 0.13
38ref|NM_015317.1| Homo sapiens pumilio homolog 2 (Drosophila) (PU... 46 0.13
39dbj|AK093847.1| Homo sapiens cDNA FLJ36528 fis, clone TRACH20040... 46 0.13
40ref|XM_692129.1| PREDICTED: Danio rerio similar to Pumilio homol... 46 0.13
41gb|AC007041.3| Homo sapiens BAC clone RP11-327N17 from 2, comple... 46 0.13
42gb|AF272350.1| Homo sapiens translational repressor pumilio (PUM... 46 0.13
43gb|AF315591.1| Homo sapiens Pumilio 2 (PUMH2) mRNA, complete cds 46 0.13
44gb|BC112048.1| Homo sapiens pumilio homolog 2 (Drosophila), mRNA... 46 0.13
45gb|BC112046.1| Homo sapiens pumilio homolog 2 (Drosophila), mRNA... 46 0.13
46dbj|D87078.3| Homo sapiens mRNA for KIAA0235 protein, partial cds 46 0.13
47gb|AC113485.19| Mus musculus chromosome 19, clone RP23-346D12, c... 44 0.53
48emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 0.53
49ref|XM_648441.1| Entamoeba histolytica HM-1:IMSS pumilio family ... 44 0.53
50emb|Z35638.1|BPLYSPR Bacteriophage phi-X174 genes for lysis prot... 44 0.53
51gb|AC158130.7| Mus musculus chromosome 19, clone RP24-360F11, co... 44 0.53
52dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
53dbj|AK073383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.53
54gb|AC146500.2| Danio rerio clone CH211-130P22, complete sequence 42 2.1
55emb|CR392003.9| Zebrafish DNA sequence from clone DKEY-242N9 in ... 42 2.1
56gb|AC129319.4| Mus musculus BAC clone RP24-127J16 from chromosom... 42 2.1
57gb|AC129313.4| Mus musculus BAC clone RP23-342K4 from chromosome... 42 2.1
58emb|BX649211.10| Zebrafish DNA sequence from clone DKEY-215O18 i... 42 2.1
59gb|AC007502.6| Homo sapiens chromosome 16 clone RP11-98C8, compl... 42 2.1
60dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
61dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
62dbj|AK106885.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
63ref|XM_493876.1| Oryza sativa (japonica cultivar-group), predic... 40 8.3
64gb|AC166357.3| Mus musculus BAC clone RP23-360N1 from chromosome... 40 8.3
65gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
66gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
67gb|AC144714.4| Mus musculus BAC clone RP24-371M20 from chromosom... 40 8.3
68gb|AC134553.5| Mus musculus BAC clone RP24-280H19 from chromosom... 40 8.3
69gb|AY656702.1| Homo sapiens interleukin 13 receptor, alpha 2 (IL... 40 8.3
70gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 8.3
71emb|AL121878.11|HSDA204F4 Human DNA sequence from clone RP6-204F... 40 8.3
72gb|AC106734.3| Homo sapiens chromosome 16 clone CTD-2336H13, com... 40 8.3
73gb|AC106729.2| Homo sapiens chromosome 16 clone CTD-2003G21, com... 40 8.3
74gb|AC118231.9| Mus musculus chromosome 5, clone RP23-462J24, com... 40 8.3
75gb|AC157503.3| Medicago truncatula chromosome 2 BAC clone mte1-5... 40 8.3
76gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01,... 40 8.3
77dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
78dbj|AP000042.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 8.3
79ref|NM_001039292.1| Gallus gallus pumilio 2 (PUM2), mRNA 40 8.3
80emb|AL954213.1| Pan troglodytes chromosome 22 clone RP43-040C07 ... 40 8.3
81emb|Z56840.1|HS14F11R H.sapiens CpG island DNA genomic Mse1 frag... 40 8.3
82emb|CT030184.14| Mouse DNA sequence from clone RP23-9C19 on chro... 40 8.3
83dbj|AP001716.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.3
84dbj|AP000866.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.3
85emb|AL805900.10| Mouse DNA sequence from clone RP23-85B14 on chr... 40 8.3
86emb|CT030166.8| Mouse DNA sequence from clone RP23-320I11 on chr... 40 8.3
87gb|AC165976.2| Gallus gallus BAC clone CH261-89G17 from chromoso... 40 8.3
88gb|AC171210.1| Mus musculus BAC clone RP23-36D15 from chromosome... 40 8.3
89gb|DQ275192.1| Gallus gallus pumilio 2 (pum2) mRNA, complete cds 40 8.3
90gb|AC151981.3| Mus musculus BAC clone RP24-66K3 from chromosome ... 40 8.3
91dbj|AP000289.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.3
92dbj|AP000186.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.3
93dbj|AP000110.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 8.3
94dbj|AP003501.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.3 
>ref|XM_483360.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3586

 Score =  416 bits (210), Expect = e-113
 Identities = 358/406 (88%), Gaps = 1/406 (0%)
 Strand = Plus / Plus

                                                                        
Query: 202  cctcgagaaatatgactgctgtttctgggtttcaagggcagcgagaaagggagaaatttg 261
            |||| ||||||||||| |||  ||||||  |||||||||||||||||||||||||||| |
Sbjct: 2145 cctcaagaaatatgaccgcttattctggtgttcaagggcagcgagaaagggagaaattcg 2204

                                                                        
Query: 262  atagcccgaaggcatgcactttcctggaagaacttaagtccaacagagcacgtagggttg 321
            ||  ||| ||||||||  | |||||||||||||| ||||| ||||| || || |||||||
Sbjct: 2205 atgacccaaaggcatgttccttcctggaagaactcaagtctaacagggctcgcagggttg 2264

                                                                        
Query: 322  agctatctgatatcacaggtcgtatagtagatttcagcgctgaccaacatggtagccgtt 381
            | |||||||||||  |||| | ||||||||| | |||||||||||||||||| ||||| |
Sbjct: 2265 aactatctgatattgcaggccatatagtagaatacagcgctgaccaacatggcagccgat 2324

                                                                        
Query: 382  tcatccagcagaagttggaaaactgcactgccgaagagaaggcggcccgtgtttgcagaa 441
            ||||||| |||||||| || ||||||||||| |||||||||||  |  |||||| |||||
Sbjct: 2325 tcatccaacagaagttagagaactgcactgctgaagagaaggcatct-gtgttttcagaa 2383

                                                                        
Query: 442  gttcttcctcatgcttcatctttaatgactgatgtgtttgggaattatgtgatccaaaag 501
            ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2384 gttctccctcatgcttcatcattaatgactgatgtgtttgggaattatgtgatccaaaag 2443

                                                                        
Query: 502  ttttttgaacatggaactcctgagcaaagaagggatcttgctgccaagcttgctggtcat 561
            || || ||||||||||||||||| ||||| |||||||||||  | ||||||| |||||||
Sbjct: 2444 ttcttcgaacatggaactcctgaacaaaggagggatcttgccactaagcttgttggtcat 2503

                                                          
Query: 562  gttgtacctttgagccttcagatgtatggatgccgagtaattcaaa 607
            ||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2504 gttttacctttgagccttcaaatgtatggatgccgagtaattcaaa 2549



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                        
Query: 71   tccaaattatcatggcatatcaccctatgttggagcgccgttgacttatccgacaagccc 130
            |||||||||||| |||||  |||| ||||||||||| ||  ||||||| || ||||||||
Sbjct: 2011 tccaaattatcaaggcatgacaccatatgttggagcaccaatgacttacccaacaagccc 2070

                        
Query: 131  agtgtttcaggg 142
            ||||||||||||
Sbjct: 2071 agtgtttcaggg 2082
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>dbj|AK121539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031I02, full
            insert sequence
          Length = 3828

 Score =  416 bits (210), Expect = e-113
 Identities = 358/406 (88%), Gaps = 1/406 (0%)
 Strand = Plus / Plus

                                                                        
Query: 202  cctcgagaaatatgactgctgtttctgggtttcaagggcagcgagaaagggagaaatttg 261
            |||| ||||||||||| |||  ||||||  |||||||||||||||||||||||||||| |
Sbjct: 2271 cctcaagaaatatgaccgcttattctggtgttcaagggcagcgagaaagggagaaattcg 2330

                                                                        
Query: 262  atagcccgaaggcatgcactttcctggaagaacttaagtccaacagagcacgtagggttg 321
            ||  ||| ||||||||  | |||||||||||||| ||||| ||||| || || |||||||
Sbjct: 2331 atgacccaaaggcatgttccttcctggaagaactcaagtctaacagggctcgcagggttg 2390

                                                                        
Query: 322  agctatctgatatcacaggtcgtatagtagatttcagcgctgaccaacatggtagccgtt 381
            | |||||||||||  |||| | ||||||||| | |||||||||||||||||| ||||| |
Sbjct: 2391 aactatctgatattgcaggccatatagtagaatacagcgctgaccaacatggcagccgat 2450

                                                                        
Query: 382  tcatccagcagaagttggaaaactgcactgccgaagagaaggcggcccgtgtttgcagaa 441
            ||||||| |||||||| || ||||||||||| |||||||||||  |  |||||| |||||
Sbjct: 2451 tcatccaacagaagttagagaactgcactgctgaagagaaggcatct-gtgttttcagaa 2509

                                                                        
Query: 442  gttcttcctcatgcttcatctttaatgactgatgtgtttgggaattatgtgatccaaaag 501
            ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2510 gttctccctcatgcttcatcattaatgactgatgtgtttgggaattatgtgatccaaaag 2569

                                                                        
Query: 502  ttttttgaacatggaactcctgagcaaagaagggatcttgctgccaagcttgctggtcat 561
            || || ||||||||||||||||| ||||| |||||||||||  | ||||||| |||||||
Sbjct: 2570 ttcttcgaacatggaactcctgaacaaaggagggatcttgccactaagcttgttggtcat 2629

                                                          
Query: 562  gttgtacctttgagccttcagatgtatggatgccgagtaattcaaa 607
            ||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2630 gttttacctttgagccttcaaatgtatggatgccgagtaattcaaa 2675



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                        
Query: 71   tccaaattatcatggcatatcaccctatgttggagcgccgttgacttatccgacaagccc 130
            |||||||||||| |||||  |||| ||||||||||| ||  ||||||| || ||||||||
Sbjct: 2137 tccaaattatcaaggcatgacaccatatgttggagcaccaatgacttacccaacaagccc 2196

                        
Query: 131  agtgtttcaggg 142
            ||||||||||||
Sbjct: 2197 agtgtttcaggg 2208
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>dbj|AK064999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E01, full
            insert sequence
          Length = 3586

 Score =  416 bits (210), Expect = e-113
 Identities = 358/406 (88%), Gaps = 1/406 (0%)
 Strand = Plus / Plus

                                                                        
Query: 202  cctcgagaaatatgactgctgtttctgggtttcaagggcagcgagaaagggagaaatttg 261
            |||| ||||||||||| |||  ||||||  |||||||||||||||||||||||||||| |
Sbjct: 2145 cctcaagaaatatgaccgcttattctggtgttcaagggcagcgagaaagggagaaattcg 2204

                                                                        
Query: 262  atagcccgaaggcatgcactttcctggaagaacttaagtccaacagagcacgtagggttg 321
            ||  ||| ||||||||  | |||||||||||||| ||||| ||||| || || |||||||
Sbjct: 2205 atgacccaaaggcatgttccttcctggaagaactcaagtctaacagggctcgcagggttg 2264

                                                                        
Query: 322  agctatctgatatcacaggtcgtatagtagatttcagcgctgaccaacatggtagccgtt 381
            | |||||||||||  |||| | ||||||||| | |||||||||||||||||| ||||| |
Sbjct: 2265 aactatctgatattgcaggccatatagtagaatacagcgctgaccaacatggcagccgat 2324

                                                                        
Query: 382  tcatccagcagaagttggaaaactgcactgccgaagagaaggcggcccgtgtttgcagaa 441
            ||||||| |||||||| || ||||||||||| |||||||||||  |  |||||| |||||
Sbjct: 2325 tcatccaacagaagttagagaactgcactgctgaagagaaggcatct-gtgttttcagaa 2383

                                                                        
Query: 442  gttcttcctcatgcttcatctttaatgactgatgtgtttgggaattatgtgatccaaaag 501
            ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2384 gttctccctcatgcttcatcattaatgactgatgtgtttgggaattatgtgatccaaaag 2443

                                                                        
Query: 502  ttttttgaacatggaactcctgagcaaagaagggatcttgctgccaagcttgctggtcat 561
            || || ||||||||||||||||| ||||| |||||||||||  | ||||||| |||||||
Sbjct: 2444 ttcttcgaacatggaactcctgaacaaaggagggatcttgccactaagcttgttggtcat 2503

                                                          
Query: 562  gttgtacctttgagccttcagatgtatggatgccgagtaattcaaa 607
            ||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2504 gttttacctttgagccttcaaatgtatggatgccgagtaattcaaa 2549



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                        
Query: 71   tccaaattatcatggcatatcaccctatgttggagcgccgttgacttatccgacaagccc 130
            |||||||||||| |||||  |||| ||||||||||| ||  ||||||| || ||||||||
Sbjct: 2011 tccaaattatcaaggcatgacaccatatgttggagcaccaatgacttacccaacaagccc 2070

                        
Query: 131  agtgtttcaggg 142
            ||||||||||||
Sbjct: 2071 agtgtttcaggg 2082
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>gb|AY105814.1| Zea mays PCO145471 mRNA sequence
          Length = 912

 Score =  252 bits (127), Expect = 1e-63
 Identities = 215/243 (88%), Gaps = 1/243 (0%)
 Strand = Plus / Plus

                                                                       
Query: 360 gctgaccaacatggtagccgtttcatccagcagaagttggaaaactgcactgccgaagag 419
           |||||||||||||||||||| ||||| || |||||||||||||| |||||||| ||||||
Sbjct: 21  gctgaccaacatggtagccgattcattcaacagaagttggaaaattgcactgctgaagag 80

                                                                       
Query: 420 aaggcggcccgtgtttgcagaagttcttcctcatgcttcatctttaatgactgatgtgtt 479
           |||||     ||||||||||| ||||||||||||||||||||  |||||||||| || ||
Sbjct: 81  aaggcatat-gtgtttgcagaggttcttcctcatgcttcatcactaatgactgacgtttt 139

                                                                       
Query: 480 tgggaattatgtgatccaaaagttttttgaacatggaactcctgagcaaagaagggatct 539
            ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 140 cgggaattatgtgatccagaagttttttgaacatggaactcgtgagcaaaggagggatct 199

                                                                       
Query: 540 tgctgccaagcttgctggtcatgttgtacctttgagccttcagatgtatggatgccgagt 599
           |||| ||||||| | |||||||||| | ||| |||| |||||||||||||| ||||| ||
Sbjct: 200 tgctaccaagctcgttggtcatgttttgcctctgagtcttcagatgtatggctgccgtgt 259

              
Query: 600 aat 602
           |||
Sbjct: 260 aat 262
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  180 bits (91), Expect = 4e-42
 Identities = 134/147 (91%), Gaps = 1/147 (0%)
 Strand = Plus / Plus

                                                                            
Query: 355      tcagcgctgaccaacatggtagccgtttcatccagcagaagttggaaaactgcactgccg 414
                ||||||||||||||||||| ||||| |||||||| |||||||| || ||||||||||| |
Sbjct: 25834106 tcagcgctgaccaacatggcagccgattcatccaacagaagttagagaactgcactgctg 25834165

                                                                            
Query: 415      aagagaaggcggcccgtgtttgcagaagttcttcctcatgcttcatctttaatgactgat 474
                ||||||||||  |  |||||| |||||||||| |||||||||||||| ||||||||||||
Sbjct: 25834166 aagagaaggcatct-gtgttttcagaagttctccctcatgcttcatcattaatgactgat 25834224

                                           
Query: 475      gtgtttgggaattatgtgatccaaaag 501
                |||||||||||||||||||||||||||
Sbjct: 25834225 gtgtttgggaattatgtgatccaaaag 25834251



 Score =  135 bits (68), Expect = 2e-28
 Identities = 92/100 (92%)
 Strand = Plus / Plus

                                                                            
Query: 508      gaacatggaactcctgagcaaagaagggatcttgctgccaagcttgctggtcatgttgta 567
                ||||||||||||||||| ||||| |||||||||||  | ||||||| |||||||||| ||
Sbjct: 25834421 gaacatggaactcctgaacaaaggagggatcttgccactaagcttgttggtcatgtttta 25834480

                                                        
Query: 568      cctttgagccttcagatgtatggatgccgagtaattcaaa 607
                |||||||||||||| |||||||||||||||||||||||||
Sbjct: 25834481 cctttgagccttcaaatgtatggatgccgagtaattcaaa 25834520



 Score =  117 bits (59), Expect = 4e-23
 Identities = 128/151 (84%)
 Strand = Plus / Plus

                                                                            
Query: 202      cctcgagaaatatgactgctgtttctgggtttcaagggcagcgagaaagggagaaatttg 261
                |||| ||||||||||| |||  ||||||  |||||||||||||||||||||||||||| |
Sbjct: 25833856 cctcaagaaatatgaccgcttattctggtgttcaagggcagcgagaaagggagaaattcg 25833915

                                                                            
Query: 262      atagcccgaaggcatgcactttcctggaagaacttaagtccaacagagcacgtagggttg 321
                ||  ||| ||||||||  | |||||||||||||| ||||| ||||| || || |||||||
Sbjct: 25833916 atgacccaaaggcatgttccttcctggaagaactcaagtctaacagggctcgcagggttg 25833975

                                               
Query: 322      agctatctgatatcacaggtcgtatagtaga 352
                | |||||||||||  |||| | |||||||||
Sbjct: 25833976 aactatctgatattgcaggccatatagtaga 25834006



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                            
Query: 71       tccaaattatcatggcatatcaccctatgttggagcgccgttgacttatccgacaagccc 130
                |||||||||||| |||||  |||| ||||||||||| ||  ||||||| || ||||||||
Sbjct: 25833722 tccaaattatcaaggcatgacaccatatgttggagcaccaatgacttacccaacaagccc 25833781

                            
Query: 131      agtgtttcaggg 142
                ||||||||||||
Sbjct: 25833782 agtgtttcaggg 25833793
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>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1003_A09
          Length = 150755

 Score =  180 bits (91), Expect = 4e-42
 Identities = 134/147 (91%), Gaps = 1/147 (0%)
 Strand = Plus / Plus

                                                                         
Query: 355   tcagcgctgaccaacatggtagccgtttcatccagcagaagttggaaaactgcactgccg 414
             ||||||||||||||||||| ||||| |||||||| |||||||| || ||||||||||| |
Sbjct: 19893 tcagcgctgaccaacatggcagccgattcatccaacagaagttagagaactgcactgctg 19952

                                                                         
Query: 415   aagagaaggcggcccgtgtttgcagaagttcttcctcatgcttcatctttaatgactgat 474
             ||||||||||  |  |||||| |||||||||| |||||||||||||| ||||||||||||
Sbjct: 19953 aagagaaggcatct-gtgttttcagaagttctccctcatgcttcatcattaatgactgat 20011

                                        
Query: 475   gtgtttgggaattatgtgatccaaaag 501
             |||||||||||||||||||||||||||
Sbjct: 20012 gtgtttgggaattatgtgatccaaaag 20038



 Score =  135 bits (68), Expect = 2e-28
 Identities = 92/100 (92%)
 Strand = Plus / Plus

                                                                         
Query: 508   gaacatggaactcctgagcaaagaagggatcttgctgccaagcttgctggtcatgttgta 567
             ||||||||||||||||| ||||| |||||||||||  | ||||||| |||||||||| ||
Sbjct: 20208 gaacatggaactcctgaacaaaggagggatcttgccactaagcttgttggtcatgtttta 20267

                                                     
Query: 568   cctttgagccttcagatgtatggatgccgagtaattcaaa 607
             |||||||||||||| |||||||||||||||||||||||||
Sbjct: 20268 cctttgagccttcaaatgtatggatgccgagtaattcaaa 20307



 Score =  117 bits (59), Expect = 4e-23
 Identities = 128/151 (84%)
 Strand = Plus / Plus

                                                                         
Query: 202   cctcgagaaatatgactgctgtttctgggtttcaagggcagcgagaaagggagaaatttg 261
             |||| ||||||||||| |||  ||||||  |||||||||||||||||||||||||||| |
Sbjct: 19643 cctcaagaaatatgaccgcttattctggtgttcaagggcagcgagaaagggagaaattcg 19702

                                                                         
Query: 262   atagcccgaaggcatgcactttcctggaagaacttaagtccaacagagcacgtagggttg 321
             ||  ||| ||||||||  | |||||||||||||| ||||| ||||| || || |||||||
Sbjct: 19703 atgacccaaaggcatgttccttcctggaagaactcaagtctaacagggctcgcagggttg 19762

                                            
Query: 322   agctatctgatatcacaggtcgtatagtaga 352
             | |||||||||||  |||| | |||||||||
Sbjct: 19763 aactatctgatattgcaggccatatagtaga 19793



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                         
Query: 71    tccaaattatcatggcatatcaccctatgttggagcgccgttgacttatccgacaagccc 130
             |||||||||||| |||||  |||| ||||||||||| ||  ||||||| || ||||||||
Sbjct: 19509 tccaaattatcaaggcatgacaccatatgttggagcaccaatgacttacccaacaagccc 19568

                         
Query: 131   agtgtttcaggg 142
             ||||||||||||
Sbjct: 19569 agtgtttcaggg 19580
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>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0689E12
          Length = 147516

 Score =  180 bits (91), Expect = 4e-42
 Identities = 134/147 (91%), Gaps = 1/147 (0%)
 Strand = Plus / Plus

                                                                          
Query: 355    tcagcgctgaccaacatggtagccgtttcatccagcagaagttggaaaactgcactgccg 414
              ||||||||||||||||||| ||||| |||||||| |||||||| || ||||||||||| |
Sbjct: 106317 tcagcgctgaccaacatggcagccgattcatccaacagaagttagagaactgcactgctg 106376

                                                                          
Query: 415    aagagaaggcggcccgtgtttgcagaagttcttcctcatgcttcatctttaatgactgat 474
              ||||||||||  |  |||||| |||||||||| |||||||||||||| ||||||||||||
Sbjct: 106377 aagagaaggcatct-gtgttttcagaagttctccctcatgcttcatcattaatgactgat 106435

                                         
Query: 475    gtgtttgggaattatgtgatccaaaag 501
              |||||||||||||||||||||||||||
Sbjct: 106436 gtgtttgggaattatgtgatccaaaag 106462



 Score =  135 bits (68), Expect = 2e-28
 Identities = 92/100 (92%)
 Strand = Plus / Plus

                                                                          
Query: 508    gaacatggaactcctgagcaaagaagggatcttgctgccaagcttgctggtcatgttgta 567
              ||||||||||||||||| ||||| |||||||||||  | ||||||| |||||||||| ||
Sbjct: 106632 gaacatggaactcctgaacaaaggagggatcttgccactaagcttgttggtcatgtttta 106691

                                                      
Query: 568    cctttgagccttcagatgtatggatgccgagtaattcaaa 607
              |||||||||||||| |||||||||||||||||||||||||
Sbjct: 106692 cctttgagccttcaaatgtatggatgccgagtaattcaaa 106731



 Score =  117 bits (59), Expect = 4e-23
 Identities = 128/151 (84%)
 Strand = Plus / Plus

                                                                          
Query: 202    cctcgagaaatatgactgctgtttctgggtttcaagggcagcgagaaagggagaaatttg 261
              |||| ||||||||||| |||  ||||||  |||||||||||||||||||||||||||| |
Sbjct: 106067 cctcaagaaatatgaccgcttattctggtgttcaagggcagcgagaaagggagaaattcg 106126

                                                                          
Query: 262    atagcccgaaggcatgcactttcctggaagaacttaagtccaacagagcacgtagggttg 321
              ||  ||| ||||||||  | |||||||||||||| ||||| ||||| || || |||||||
Sbjct: 106127 atgacccaaaggcatgttccttcctggaagaactcaagtctaacagggctcgcagggttg 106186

                                             
Query: 322    agctatctgatatcacaggtcgtatagtaga 352
              | |||||||||||  |||| | |||||||||
Sbjct: 106187 aactatctgatattgcaggccatatagtaga 106217



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                          
Query: 71     tccaaattatcatggcatatcaccctatgttggagcgccgttgacttatccgacaagccc 130
              |||||||||||| |||||  |||| ||||||||||| ||  ||||||| || ||||||||
Sbjct: 105933 tccaaattatcaaggcatgacaccatatgttggagcaccaatgacttacccaacaagccc 105992

                          
Query: 131    agtgtttcaggg 142
              ||||||||||||
Sbjct: 105993 agtgtttcaggg 106004
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>dbj|D21293.1|RICSS412 Oryza sativa SS412 mRNA for pumilo protein, partial sequence
          Length = 337

 Score =  135 bits (68), Expect = 2e-28
 Identities = 92/100 (92%)
 Strand = Plus / Plus

                                                                       
Query: 508 gaacatggaactcctgagcaaagaagggatcttgctgccaagcttgctggtcatgttgta 567
           ||||||||||||||||| ||||| |||||||||||  | ||||||| |||||||||| ||
Sbjct: 6   gaacatggaactcctgaacaaaggagggatcttgccactaagcttgttggtcatgtttta 65

                                                   
Query: 568 cctttgagccttcagatgtatggatgccgagtaattcaaa 607
           |||||||||||||| |||||||||||||||||||||||||
Sbjct: 66  cctttgagccttcaaatgtatggatgccgagtaattcaaa 105
to top
>gb|AF153276.1|AF153276 Populus tremula x Populus tremuloides pumilio domain-containing
            protein PPD1 (PPD1) mRNA, complete cds
          Length = 3474

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 75/87 (86%)
 Strand = Plus / Plus

                                                                        
Query: 438  agaagttcttcctcatgcttcatctttaatgactgatgtgtttgggaattatgtgatcca 497
            ||||||||||||||||||| ||    ||||||| ||||| ||||| |||||||| || ||
Sbjct: 2283 agaagttcttcctcatgctccaaaactaatgacagatgtttttggaaattatgttattca 2342

                                       
Query: 498  aaagttttttgaacatggaactcctga 524
            ||| |||||||||||||||| ||||||
Sbjct: 2343 aaaattttttgaacatggaagtcctga 2369
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>ref|NM_111871.2| Arabidopsis thaliana RNA binding AT3G10360 mRNA, complete cds
          Length = 3012

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                   
Query: 461  ctttaatgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatgg 515
            |||||||||| ||||| ||||| |||||||| || ||||||||||||||||||||
Sbjct: 2120 ctttaatgacagatgtctttggaaattatgtcattcaaaagttttttgaacatgg 2174
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 547      aagcttgctggtcatgttgtacctttgagccttcagatgtatggatgccgagtaattca 605
                |||||||| ||||||||  |  |||||||||||||||||||||||||| ||||||||||
Sbjct: 18931956 aagcttgccggtcatgtgttttctttgagccttcagatgtatggatgcagagtaattca 18931898



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                            
Query: 555     tggtcatgttgtacctttgagccttcagatgtatggatgccgagt 599
               ||||||||| ||| |  |||||||||| ||||||||||| |||||
Sbjct: 4549647 tggtcatgtggtagccctgagccttcacatgtatggatgtcgagt 4549603
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>emb|BX824616.1|CNS0A4VA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH5ZF11 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 3774

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                   
Query: 461  ctttaatgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatgg 515
            |||||||||| ||||| ||||| |||||||| || ||||||||||||||||||||
Sbjct: 2431 ctttaatgacagatgtctttggaaattatgtcattcaaaagttttttgaacatgg 2485
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>gb|BT005311.1| Arabidopsis thaliana At3g10360 mRNA, complete cds
          Length = 993

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                  
Query: 461 ctttaatgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatgg 515
           |||||||||| ||||| ||||| |||||||| || ||||||||||||||||||||
Sbjct: 101 ctttaatgacagatgtctttggaaattatgtcattcaaaagttttttgaacatgg 155
to top
>dbj|AK117911.1| Arabidopsis thaliana At3g10360 mRNA for putative RNA binding
           protein, complete cds, clone: RAFL19-09-E09
          Length = 1516

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                  
Query: 461 ctttaatgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatgg 515
           |||||||||| ||||| ||||| |||||||| || ||||||||||||||||||||
Sbjct: 232 ctttaatgacagatgtctttggaaattatgtcattcaaaagttttttgaacatgg 286
to top
>dbj|AK070870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075A04, full
            insert sequence
          Length = 3589

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                       
Query: 547  aagcttgctggtcatgttgtacctttgagccttcagatgtatggatgccgagtaattca 605
            |||||||| ||||||||  |  |||||||||||||||||||||||||| ||||||||||
Sbjct: 2422 aagcttgccggtcatgtgttttctttgagccttcagatgtatggatgcagagtaattca 2480
to top
>ref|NM_202889.2| Arabidopsis thaliana RNA binding AT4G25880 transcript variant
            AT4G25880.2 mRNA, complete cds
          Length = 3313

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                
Query: 466  atgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatggaa 517
            ||||| ||||||||||| |||||||| || || |||||||||||| ||||||
Sbjct: 1771 atgacagatgtgtttggaaattatgtcattcagaagttttttgaatatggaa 1822
to top
>ref|NM_001036643.1| Arabidopsis thaliana RNA binding AT4G25880 transcript variant
            AT4G25880.3 mRNA, complete cds
          Length = 3330

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                
Query: 466  atgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatggaa 517
            ||||| ||||||||||| |||||||| || || |||||||||||| ||||||
Sbjct: 1771 atgacagatgtgtttggaaattatgtcattcagaagttttttgaatatggaa 1822
to top
>ref|NM_118721.2| Arabidopsis thaliana RNA binding AT4G25880 transcript variant
            AT4G25880.1 mRNA, complete cds
          Length = 3192

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                
Query: 466  atgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatggaa 517
            ||||| ||||||||||| |||||||| || || |||||||||||| ||||||
Sbjct: 2050 atgacagatgtgtttggaaattatgtcattcagaagttttttgaatatggaa 2101
to top
>gb|AY133866.1| Arabidopsis thaliana clone U09349 putative pumilio protein
            (AT4g25880) mRNA, complete cds
          Length = 2617

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                
Query: 466  atgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatggaa 517
            ||||| ||||||||||| |||||||| || || |||||||||||| ||||||
Sbjct: 1729 atgacagatgtgtttggaaattatgtcattcagaagttttttgaatatggaa 1780
to top
>gb|AF360298.1| Arabidopsis thaliana putative pumilio protein (At4g25880) mRNA,
            complete cds
          Length = 2980

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                
Query: 466  atgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatggaa 517
            ||||| ||||||||||| |||||||| || || |||||||||||| ||||||
Sbjct: 1866 atgacagatgtgtttggaaattatgtcattcagaagttttttgaatatggaa 1917
to top
>emb|BX826676.1|CNS0A36J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB53ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1804

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 466 atgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatggaa 517
           ||||| ||||||||||| |||||||| || || |||||||||||| ||||||
Sbjct: 746 atgacagatgtgtttggaaattatgtcattcagaagttttttgaatatggaa 797
to top
>ref|NM_190576.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3147

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 574  agccttcagatgtatggatgccgagt 599
            ||||||||||||||||||||||||||
Sbjct: 2380 agccttcagatgtatggatgccgagt 2405



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 354  ttcagcgctgaccaacatggtagccgtttcatccagca 391
            ||||||||||||||| | || ||||||||||| |||||
Sbjct: 2161 ttcagcgctgaccaatacggaagccgtttcatacagca 2198
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 574      agccttcagatgtatggatgccgagt 599
                ||||||||||||||||||||||||||
Sbjct: 36276694 agccttcagatgtatggatgccgagt 36276719



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 356      cagcgctgaccaacatggtagccgtttcatccagca 391
                ||||||||||||| | || ||||||||||| |||||
Sbjct: 36276346 cagcgctgaccaatacggaagccgtttcatacagca 36276381
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>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446B05
          Length = 149145

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 574   agccttcagatgtatggatgccgagt 599
             ||||||||||||||||||||||||||
Sbjct: 26571 agccttcagatgtatggatgccgagt 26596



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 356   cagcgctgaccaacatggtagccgtttcatccagca 391
             ||||||||||||| | || ||||||||||| |||||
Sbjct: 26223 cagcgctgaccaatacggaagccgtttcatacagca 26258
to top
>dbj|AK103686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136F19, full
            insert sequence
          Length = 3527

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 574  agccttcagatgtatggatgccgagt 599
            ||||||||||||||||||||||||||
Sbjct: 2353 agccttcagatgtatggatgccgagt 2378



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 354  ttcagcgctgaccaacatggtagccgtttcatccagca 391
            ||||||||||||||| | || ||||||||||| |||||
Sbjct: 2134 ttcagcgctgaccaatacggaagccgtttcatacagca 2171
to top
>dbj|AK102882.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112I24, full
            insert sequence
          Length = 2841

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 574  agccttcagatgtatggatgccgagt 599
            ||||||||||||||||||||||||||
Sbjct: 2773 agccttcagatgtatggatgccgagt 2798



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 354  ttcagcgctgaccaacatggtagccgtttcatccagca 391
            ||||||||||||||| | || ||||||||||| |||||
Sbjct: 2554 ttcagcgctgaccaatacggaagccgtttcatacagca 2591
to top
>dbj|AK099801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098A15, full
            insert sequence
          Length = 3958

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 574  agccttcagatgtatggatgccgagt 599
            ||||||||||||||||||||||||||
Sbjct: 2777 agccttcagatgtatggatgccgagt 2802



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 354  ttcagcgctgaccaacatggtagccgtttcatccagca 391
            ||||||||||||||| | || ||||||||||| |||||
Sbjct: 2558 ttcagcgctgaccaatacggaagccgtttcatacagca 2595
to top
>ref|XM_474813.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2388

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 469  actgatgtgtttgggaattatgtgatccaaaagttttttga 509
            |||||||| ||||| ||||||||||| || |||||||||||
Sbjct: 1480 actgatgtatttggcaattatgtgattcagaagttttttga 1520
to top
>ref|XM_706368.1| Candida albicans SC5314 hypothetical protein (CaO19.9361), mRNA
          Length = 2790

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 463  ttaatgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatgg 515
            |||||||| ||||| |||||||||||||| || ||||| | ||||||| ||||
Sbjct: 1882 ttaatgaccgatgtttttgggaattatgttattcaaaaatattttgaatatgg 1934
to top
>ref|XM_706351.1| Candida albicans SC5314 hypothetical protein (CaO19.1795), mRNA
          Length = 2790

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 463  ttaatgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatgg 515
            |||||||| ||||| |||||||||||||| || ||||| | ||||||| ||||
Sbjct: 1882 ttaatgaccgatgtttttgggaattatgttattcaaaaatattttgaatatgg 1934
to top
>ref|NM_112916.3| Arabidopsis thaliana RNA binding AT3G20250 mRNA, complete cds
          Length = 3157

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 466  atgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatggaactcc 521
            |||||||| || ||||| |||||||| |||||||| ||  | ||||||||||||||
Sbjct: 2148 atgactgacgtttttggaaattatgtcatccaaaaattcatagaacatggaactcc 2203
to top
>emb|BX824276.1|CNS0A7RW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH35ZG07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1848

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 466 atgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatggaactcc 521
           |||||||| || ||||| |||||||| |||||||| ||  | ||||||||||||||
Sbjct: 846 atgactgacgtttttggaaattatgtcatccaaaaattcatagaacatggaactcc 901
to top
>gb|AY179886.1| Schistocerca americana pumilio RBD (pum) mRNA, partial cds
          Length = 966

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 466 atgactgatgtgtttgggaattatgtgatccaaaagttttttga 509
           ||||| ||||| ||||| |||||||| || ||||||||||||||
Sbjct: 295 atgacagatgtatttggcaattatgtcattcaaaagttttttga 338
to top
>ref|XM_515319.1| PREDICTED: Pan troglodytes similar to Pum2 protein (LOC459053), mRNA
          Length = 3051

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 463  ttaatgactgatgtgtttgggaattatgtgatccaaaagttttttga 509
            |||||||||||||| ||||| || ||||| || || |||||||||||
Sbjct: 2164 ttaatgactgatgtttttggcaactatgttatacagaagttttttga 2210
to top
>ref|XM_457992.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C07942g)
            partial mRNA
          Length = 2463

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                               
Query: 466  atgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatgga 516
            ||||||||||| || || |||||||| || ||||||| ||| |||||||||
Sbjct: 1564 atgactgatgttttcggtaattatgtcatacaaaagtatttcgaacatgga 1614
to top
>gb|BC024218.2| Homo sapiens pumilio homolog 2 (Drosophila), mRNA (cDNA clone
           IMAGE:3841907), partial cds
          Length = 3210

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 463 ttaatgactgatgtgtttgggaattatgtgatccaaaagttttttga 509
           |||||||||||||| ||||| || ||||| || || |||||||||||
Sbjct: 577 ttaatgactgatgtttttggcaactatgttatacagaagttttttga 623
to top
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces
              hansenii
          Length = 1592360

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                 
Query: 466    atgactgatgtgtttgggaattatgtgatccaaaagttttttgaacatgga 516
              ||||||||||| || || |||||||| || ||||||| ||| |||||||||
Sbjct: 644351 atgactgatgttttcggtaattatgtcatacaaaagtatttcgaacatgga 644401
to top
>ref|NM_015317.1| Homo sapiens pumilio homolog 2 (Drosophila) (PUM2), mRNA
          Length = 6111

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 463  ttaatgactgatgtgtttgggaattatgtgatccaaaagttttttga 509
            |||||||||||||| ||||| || ||||| || || |||||||||||
Sbjct: 2331 ttaatgactgatgtttttggcaactatgttatacagaagttttttga 2377
to top
>dbj|AK093847.1| Homo sapiens cDNA FLJ36528 fis, clone TRACH2004039, weakly similar to
            MATERNAL PUMILIO PROTEIN
          Length = 3595

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 463  ttaatgactgatgtgtttgggaattatgtgatccaaaagttttttga 509
            |||||||||||||| ||||| || ||||| || || |||||||||||
Sbjct: 2432 ttaatgactgatgtttttggcaactatgttatacagaagttttttga 2478
to top
>ref|XM_692129.1| PREDICTED: Danio rerio similar to Pumilio homolog 2 (Pumilio2)
            (LOC568777), mRNA
          Length = 2211

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 471  tgatgtgtttgggaattatgtgatccaaaagttttttga 509
            |||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 1884 tgatgtgtttggaaattatgtcatccagaagttctttga 1922
to top
>gb|AC007041.3| Homo sapiens BAC clone RP11-327N17 from 2, complete sequence
          Length = 173397

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 463   ttaatgactgatgtgtttgggaattatgtgatccaaaagttttttga 509
             |||||||||||||| ||||| || ||||| || || |||||||||||
Sbjct: 24032 ttaatgactgatgtttttggcaactatgttatacagaagttttttga 23986
to top
>gb|AF272350.1| Homo sapiens translational repressor pumilio (PUM2) mRNA, partial cds
          Length = 4397

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 463  ttaatgactgatgtgtttgggaattatgtgatccaaaagttttttga 509
            |||||||||||||| ||||| || ||||| || || |||||||||||
Sbjct: 1744 ttaatgactgatgtttttggcaactatgttatacagaagttttttga 1790
to top
>gb|AF315591.1| Homo sapiens Pumilio 2 (PUMH2) mRNA, complete cds
          Length = 6111

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 463  ttaatgactgatgtgtttgggaattatgtgatccaaaagttttttga 509
            |||||||||||||| ||||| || ||||| || || |||||||||||
Sbjct: 2331 ttaatgactgatgtttttggcaactatgttatacagaagttttttga 2377
to top
>gb|BC112048.1| Homo sapiens pumilio homolog 2 (Drosophila), mRNA (cDNA clone
            MGC:138253 IMAGE:8327516), complete cds
          Length = 3256

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 463  ttaatgactgatgtgtttgggaattatgtgatccaaaagttttttga 509
            |||||||||||||| ||||| || ||||| || || |||||||||||
Sbjct: 2334 ttaatgactgatgtttttggcaactatgttatacagaagttttttga 2380
to top
>gb|BC112046.1| Homo sapiens pumilio homolog 2 (Drosophila), mRNA (cDNA clone
            MGC:138251 IMAGE:8327514), complete cds
          Length = 3256

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 463  ttaatgactgatgtgtttgggaattatgtgatccaaaagttttttga 509
            |||||||||||||| ||||| || ||||| || || |||||||||||
Sbjct: 2334 ttaatgactgatgtttttggcaactatgttatacagaagttttttga 2380
to top
>dbj|D87078.3| Homo sapiens mRNA for KIAA0235 protein, partial cds
          Length = 6040

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 463  ttaatgactgatgtgtttgggaattatgtgatccaaaagttttttga 509
            |||||||||||||| ||||| || ||||| || || |||||||||||
Sbjct: 2308 ttaatgactgatgtttttggcaactatgttatacagaagttttttga 2354
to top
>gb|AC113485.19| Mus musculus chromosome 19, clone RP23-346D12, complete sequence
          Length = 190974

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 404   ctgcactgccgaagagaaggcggccc 429
             ||||||||| ||||||||||||||||
Sbjct: 34258 ctgcactgctgaagagaaggcggccc 34233
to top
>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15,
             complete sequence
          Length = 185021

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 554   ctggtcatgttgtacctttgagccttcagatgtatggatgccgagt 599
             |||||||||| ||| | |||||||||||  |||||||||| |||||
Sbjct: 34658 ctggtcatgtggtagccttgagccttcacgtgtatggatgtcgagt 34703
to top
>ref|XM_648441.1| Entamoeba histolytica HM-1:IMSS pumilio family RNA-binding protein
           (80.t00012) partial mRNA
          Length = 1455

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 463 ttaatgactgatgtgtttgggaattatgtgatccaaaa 500
           |||||||||||| | |||||||||||||| || |||||
Sbjct: 619 ttaatgactgatttatttgggaattatgtaattcaaaa 656
to top
>emb|Z35638.1|BPLYSPR Bacteriophage phi-X174 genes for lysis protein and beta-lactamase
          Length = 3164

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 539  ttgctgccaagcttgctggtcatgtt 564
            |||||||||||||||||| |||||||
Sbjct: 2503 ttgctgccaagcttgctgatcatgtt 2528
to top
>gb|AC158130.7| Mus musculus chromosome 19, clone RP24-360F11, complete sequence
          Length = 206879

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 404    ctgcactgccgaagagaaggcggccc 429
              ||||||||| ||||||||||||||||
Sbjct: 103051 ctgcactgctgaagagaaggcggccc 103076
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 554      ctggtcatgttgtacctttgagccttcagatgtatggatgccgagt 599
                |||||||||| ||| | |||||||||||  |||||||||| |||||
Sbjct: 11711871 ctggtcatgtggtagccttgagccttcacgtgtatggatgtcgagt 11711916
to top
>dbj|AK073383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029C15, full
            insert sequence
          Length = 1808

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                          
Query: 554  ctggtcatgttgtacctttgagccttcagatgtatggatgccgagt 599
            |||||||||| ||| | |||||||||||  |||||||||| |||||
Sbjct: 1431 ctggtcatgtggtagccttgagccttcacgtgtatggatgtcgagt 1476
to top
>gb|AC146500.2| Danio rerio clone CH211-130P22, complete sequence
          Length = 165269

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 232   ttcaagggcagcgagaaagggagaa 256
             ||||| |||||||||||||||||||
Sbjct: 52679 ttcaaaggcagcgagaaagggagaa 52703
to top
>emb|CR392003.9| Zebrafish DNA sequence from clone DKEY-242N9 in linkage group 3, complete
              sequence
          Length = 182043

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 232    ttcaagggcagcgagaaagggagaa 256
              ||||| |||||||||||||||||||
Sbjct: 134982 ttcaaaggcagcgagaaagggagaa 134958
to top
>gb|AC129319.4| Mus musculus BAC clone RP24-127J16 from chromosome 8, complete sequence
          Length = 169835

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 62     agaaactgttccaaattatca 82
              |||||||||||||||||||||
Sbjct: 107991 agaaactgttccaaattatca 108011
to top
>gb|AC129313.4| Mus musculus BAC clone RP23-342K4 from chromosome 8, complete
            sequence
          Length = 215576

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 62   agaaactgttccaaattatca 82
            |||||||||||||||||||||
Sbjct: 1779 agaaactgttccaaattatca 1799
to top
>emb|BX649211.10| Zebrafish DNA sequence from clone DKEY-215O18 in linkage group 3,
             complete sequence
          Length = 125992

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 232   ttcaagggcagcgagaaagggagaa 256
             ||||| |||||||||||||||||||
Sbjct: 22796 ttcaaaggcagcgagaaagggagaa 22772
to top
>gb|AC007502.6| Homo sapiens chromosome 16 clone RP11-98C8, complete sequence
          Length = 158696

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 382   tcatccagcagaagttggaaa 402
             |||||||||||||||||||||
Sbjct: 42022 tcatccagcagaagttggaaa 42002
to top
>dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0681H07
          Length = 144722

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 555  tggtcatgttgtacctttgagccttcagatgtatggatgccgagt 599
            ||||||||| ||| |  |||||||||| ||||||||||| |||||
Sbjct: 2516 tggtcatgtggtagccctgagccttcacatgtatggatgtcgagt 2472
to top
>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 555   tggtcatgttgtacctttgagccttcagatgtatggatgccgagt 599
             ||||||||| ||| |  |||||||||| ||||||||||| |||||
Sbjct: 93021 tggtcatgtggtagccctgagccttcacatgtatggatgtcgagt 92977
to top
>dbj|AK106885.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-F08, full
            insert sequence
          Length = 2774

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 478  tttgggaattatgtgatccaa 498
            |||||||||||||||||||||
Sbjct: 2004 tttgggaattatgtgatccaa 2024
to top
>ref|XM_493876.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2556

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 577  cttcagatgtatggatgccg 596
            ||||||||||||||||||||
Sbjct: 1786 cttcagatgtatggatgccg 1805
to top
>gb|AC166357.3| Mus musculus BAC clone RP23-360N1 from chromosome 7, complete sequence
          Length = 220916

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 538    cttgctgccaagcttgctgg 557
              ||||||||||||||||||||
Sbjct: 111627 cttgctgccaagcttgctgg 111646
to top
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
            complete sequence
          Length = 176678

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 577  cttcagatgtatggatgccg 596
            ||||||||||||||||||||
Sbjct: 5863 cttcagatgtatggatgccg 5844
to top
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01,
              complete sequence
          Length = 152233

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 577    cttcagatgtatggatgccg 596
              ||||||||||||||||||||
Sbjct: 150111 cttcagatgtatggatgccg 150092
to top
>gb|AC144714.4| Mus musculus BAC clone RP24-371M20 from chromosome 8, complete sequence
          Length = 176994

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 555   tggtcatgttgtacctttga 574
             ||||||||||||||||||||
Sbjct: 53571 tggtcatgttgtacctttga 53552
to top
>gb|AC134553.5| Mus musculus BAC clone RP24-280H19 from chromosome 12, complete
             sequence
          Length = 168895

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 537   tcttgctgccaagcttgctg 556
             ||||||||||||||||||||
Sbjct: 33927 tcttgctgccaagcttgctg 33946
to top
>gb|AY656702.1| Homo sapiens interleukin 13 receptor, alpha 2 (IL13RA2) gene,
            complete cds
          Length = 17618

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   gttccaaattatcatggcat 88
            ||||||||||||||||||||
Sbjct: 7437 gttccaaattatcatggcat 7456
to top
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 154     ctggaatttccccctctggc 173
               ||||||||||||||||||||
Sbjct: 2037469 ctggaatttccccctctggc 2037488
to top
>emb|AL121878.11|HSDA204F4 Human DNA sequence from clone RP6-204F4 on chromosome Xq23-24 Contains
             the IL13RA2 gene for interleukin 13 receptor, alpha 2, a
             zinc finger protein 33a (ZNF33A) pseudogene, a
             Yes-associated protein 1 65kDa (YAP1) pseudogene and the
             3'end of a novel gene (KIAA1495), complete sequence
          Length = 122889

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    gttccaaattatcatggcat 88
             ||||||||||||||||||||
Sbjct: 16241 gttccaaattatcatggcat 16222
to top
>gb|AC106734.3| Homo sapiens chromosome 16 clone CTD-2336H13, complete sequence
          Length = 109765

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 160   tttccccctctggccgaaatgatc 183
             |||||||||||||| |||||||||
Sbjct: 82594 tttccccctctggctgaaatgatc 82617
to top
>gb|AC106729.2| Homo sapiens chromosome 16 clone CTD-2003G21, complete sequence
          Length = 98204

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 160  tttccccctctggccgaaatgatc 183
            |||||||||||||| |||||||||
Sbjct: 8316 tttccccctctggctgaaatgatc 8339
to top
>gb|AC118231.9| Mus musculus chromosome 5, clone RP23-462J24, complete sequence
          Length = 186083

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 538   cttgctgccaagcttgctgg 557
             ||||||||||||||||||||
Sbjct: 56992 cttgctgccaagcttgctgg 56973
to top
>gb|AC157503.3| Medicago truncatula chromosome 2 BAC clone mte1-58k20, complete
             sequence
          Length = 115769

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 461   ctttaatgactgatgtgtttgggaattatgtg 492
             |||| ||||||||||| ||||| |||||||||
Sbjct: 44276 ctttgatgactgatgtctttggtaattatgtg 44307
to top
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence
          Length = 151589

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 577   cttcagatgtatggatgccg 596
             ||||||||||||||||||||
Sbjct: 88262 cttcagatgtatggatgccg 88243
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 577    cttcagatgtatggatgccg 596
              ||||||||||||||||||||
Sbjct: 488464 cttcagatgtatggatgccg 488445
to top
>dbj|AP000042.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 13/28, complete
            sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 508  gaacatggaactcctgagca 527
            ||||||||||||||||||||
Sbjct: 6804 gaacatggaactcctgagca 6823
to top
>ref|NM_001039292.1| Gallus gallus pumilio 2 (PUM2), mRNA
          Length = 3329

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 466  atgactgatgtgtttgggaattatgtgatccaaaagttttttga 509
            ||||||||||||||||| || ||||| || || ||||| |||||
Sbjct: 2323 atgactgatgtgtttggaaactatgtaatacagaagttctttga 2366
to top
>emb|AL954213.1| Pan troglodytes chromosome 22 clone RP43-040C07 map 22q22.11, complete
             sequence
          Length = 156234

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   gaacatggaactcctgagca 527
             ||||||||||||||||||||
Sbjct: 89013 gaacatggaactcctgagca 89032
to top
>emb|Z56840.1|HS14F11R H.sapiens CpG island DNA genomic Mse1 fragment, clone 14f11,
           reverse read cpg14f11.rt1b
          Length = 322

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 147 cctttctctggaatttccccctct 170
           |||||| |||||||||||||||||
Sbjct: 143 cctttccctggaatttccccctct 166
to top
>emb|CT030184.14| Mouse DNA sequence from clone RP23-9C19 on chromosome 13, complete
              sequence
          Length = 201341

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 538    cttgctgccaagcttgctgg 557
              ||||||||||||||||||||
Sbjct: 126717 cttgctgccaagcttgctgg 126736
to top
>dbj|AP001716.1| Homo sapiens genomic DNA, chromosome 21q, section 60/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   gaacatggaactcctgagca 527
             ||||||||||||||||||||
Sbjct: 32954 gaacatggaactcctgagca 32973
to top
>dbj|AP000866.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-677M14, complete
              sequence
          Length = 187960

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 147    cctttctctggaatttccccctct 170
              |||||| |||||||||||||||||
Sbjct: 185380 cctttccctggaatttccccctct 185357
to top
>emb|AL805900.10| Mouse DNA sequence from clone RP23-85B14 on chromosome 4, complete
             sequence
          Length = 103933

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   tgtgatccaaaagttttttg 508
             ||||||||||||||||||||
Sbjct: 53222 tgtgatccaaaagttttttg 53241
to top
>emb|CT030166.8| Mouse DNA sequence from clone RP23-320I11 on chromosome 13, complete
             sequence
          Length = 222942

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 538   cttgctgccaagcttgctgg 557
             ||||||||||||||||||||
Sbjct: 36064 cttgctgccaagcttgctgg 36083
to top
>gb|AC165976.2| Gallus gallus BAC clone CH261-89G17 from chromosome ul, complete
             sequence
          Length = 176724

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 438   agaagttcttcctcatgctt 457
             ||||||||||||||||||||
Sbjct: 89594 agaagttcttcctcatgctt 89613
to top
>gb|AC171210.1| Mus musculus BAC clone RP23-36D15 from chromosome 7, complete sequence
          Length = 221010

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 538   cttgctgccaagcttgctgg 557
             ||||||||||||||||||||
Sbjct: 18066 cttgctgccaagcttgctgg 18085
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>gb|DQ275192.1| Gallus gallus pumilio 2 (pum2) mRNA, complete cds
          Length = 3329

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 466  atgactgatgtgtttgggaattatgtgatccaaaagttttttga 509
            ||||||||||||||||| || ||||| || || ||||| |||||
Sbjct: 2323 atgactgatgtgtttggaaactatgtaatacagaagttctttga 2366
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>gb|AC151981.3| Mus musculus BAC clone RP24-66K3 from chromosome 12, complete sequence
          Length = 185710

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 537   tcttgctgccaagcttgctg 556
             ||||||||||||||||||||
Sbjct: 48047 tcttgctgccaagcttgctg 48028
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>dbj|AP000289.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:S701, complete sequence
          Length = 87375

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   gaacatggaactcctgagca 527
             ||||||||||||||||||||
Sbjct: 16595 gaacatggaactcctgagca 16614
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>dbj|AP000186.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 13/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   gaacatggaactcctgagca 527
             ||||||||||||||||||||
Sbjct: 12780 gaacatggaactcctgagca 12799
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>dbj|AP000110.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 13/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   gaacatggaactcctgagca 527
             ||||||||||||||||||||
Sbjct: 12780 gaacatggaactcctgagca 12799
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>dbj|AP003501.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-664I21, complete
            sequence
          Length = 186971

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 147  cctttctctggaatttccccctct 170
            |||||| |||||||||||||||||
Sbjct: 1843 cctttccctggaatttccccctct 1820


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,393,123
Number of Sequences: 3902068
Number of extensions: 5393123
Number of successful extensions: 143872
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143447
Number of HSP's gapped (non-prelim): 418
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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