ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalo10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SYG_ARCFU (O29346) Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine... 30 4.5
2IRPL2_MOUSE (Q9ERS6) X-linked interleukin-1 receptor accessory p... 30 5.9
3IRPL2_HUMAN (Q9NP60) X-linked interleukin-1 receptor accessory p... 30 5.9
4YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear pro... 29 7.8
5LIP_RHIOR (P61872) Lipase precursor (EC 3.1.1.3) (Triacylglycero... 29 7.8
6LIP_RHINI (P61871) Lipase precursor (EC 3.1.1.3) (Triacylglycero... 29 7.8
7HYES_PIG (Q6Q2C2) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epox... 24 9.6

>SYG_ARCFU (O29346) Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine--tRNA|
           ligase) (GlyRS)
          Length = 570

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 153 GFIQLRQFVYFTDSFFFHAGSRQYDHFPIY 242
           G I+LR+F      FF H G +++ HF +Y
Sbjct: 199 GVIRLREFNQAELEFFVHPGEKKHPHFSLY 228



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>IRPL2_MOUSE (Q9ERS6) X-linked interleukin-1 receptor accessory protein-like 2|
           precursor (IL1RAPL-2-related protein) (TIGIRR-1)
          Length = 686

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 507 KVYRCMKLNRNNIVIYQEIHVSYGSNYTCNWK 412
           K++R + + + N ++ QE+    G NYTC  K
Sbjct: 186 KMWRSIIIQKGNALLIQEVQEEDGGNYTCELK 217



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>IRPL2_HUMAN (Q9NP60) X-linked interleukin-1 receptor accessory protein-like 2|
           precursor (IL1RAPL-2-related protein) (Interleukin-1
           receptor 9) (IL-1R9) (IL-1 receptor accessory
           protein-like 2) (Three immunoglobulin domain-containing
           IL-1 receptor-related
          Length = 686

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 507 KVYRCMKLNRNNIVIYQEIHVSYGSNYTCNWK 412
           K++R + + + N ++ QE+    G NYTC  K
Sbjct: 186 KMWRSIIIQKGNALLIQEVQEEDGGNYTCELK 217



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>YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
          Length = 1386

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +2

Query: 5   HQXSTQLRPIFALPLHRAELLLARATEEPASLASPGQTRHKSSEPL 142
           H  S Q R    LP H+  L+ A+   EP    +PG    + +EPL
Sbjct: 252 HLLSLQQRTKVHLPGHKKGLVTAKDVPEPIKEEAPGPAASQVAEPL 297



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>LIP_RHIOR (P61872) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
           (ROL) (RDL)
          Length = 392

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 154 PHAPKR-FRTLVPGLAWGS*AGWFFSGTSKQQLCSMQWQSKD 32
           PH P + F  L PG+       W  SGTS  Q+C+ + ++KD
Sbjct: 330 PHVPPQSFGFLHPGVE-----SWIKSGTSNVQICTSEIETKD 366



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>LIP_RHINI (P61871) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
           (Lipase II) (RNL)
          Length = 392

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 154 PHAPKR-FRTLVPGLAWGS*AGWFFSGTSKQQLCSMQWQSKD 32
           PH P + F  L PG+       W  SGTS  Q+C+ + ++KD
Sbjct: 330 PHVPPQSFGFLHPGVE-----SWIKSGTSNVQICTSEIETKD 366



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>HYES_PIG (Q6Q2C2) Epoxide hydrolase 2 (EC 3.3.2.3) (Soluble epoxide|
           hydrolase) (SEH) (Epoxide hydratase) (Cytosolic epoxide
           hydrolase) (CEH)
          Length = 555

 Score = 24.3 bits (51), Expect(2) = 9.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +3

Query: 3   PIXPPRSCGPSLLCH 47
           P  PP SC PS L H
Sbjct: 225 PALPPTSCDPSALSH 239



 Score = 23.1 bits (48), Expect(2) = 9.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 86  EPASLASPGQTRHKSSEPLRSVRIHSTTSVCLLHGF 193
           +P++L S G    K    L  V + S  +VCL HGF
Sbjct: 233 DPSAL-SHGYVLIKPGVRLHFVEMGSGPAVCLCHGF 267


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,570,146
Number of Sequences: 219361
Number of extensions: 1625390
Number of successful extensions: 4283
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4282
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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