Clone Name | baalo07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_473356.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1500 Score = 89.7 bits (45), Expect = 1e-14 Identities = 129/157 (82%) Strand = Plus / Plus Query: 291 gcgctgaagccgtcggagctggcgctgtcaacggccaggttcctggaagagaacataggc 350 ||||||||||| ||||||||||||| | | || || | |||||| | || ||| | ||| Sbjct: 472 gcgctgaagccatcggagctggcgccggccaccgctaagttcctcggcgacaacgtcggc 531 Query: 351 gagtacctggacgccaatgcggtgaaggtcatccagggcggccccgcggtgggcgagcag 410 | ||| ||||||||| || |||||||||||||||||||| || | ||| ||||||||| Sbjct: 532 aaatacatggacgccacggccgtgaaggtcatccagggcgggccggaggttggcgagcag 591 Query: 411 ctgatggagcaccaatgggacaaggtcctcttcaccg 447 || ||||| ||| ||||||||||||||| ||||||| Sbjct: 592 ctcatggaacacagatgggacaaggtccttttcaccg 628 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 497 cgaagcacctaacgccggtggcgctggagctgggcgggaagtgcccctgcatcttcga 554 |||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 668 cgaagcacctgacgcccgtggcgcttgagctcggcgggaagtgcccctgcatcttcga 725
>gb|AF464932.1| Oryza sativa (indica cultivar-group) aldehyde dehydrogenase (ALDH1) mRNA, complete cds Length = 1907 Score = 89.7 bits (45), Expect = 1e-14 Identities = 129/157 (82%) Strand = Plus / Plus Query: 291 gcgctgaagccgtcggagctggcgctgtcaacggccaggttcctggaagagaacataggc 350 ||||||||||| ||||||||||||| | | || || | |||||| | || ||| | ||| Sbjct: 606 gcgctgaagccatcggagctggcgccggccaccgctaagttcctcggcgacaacgtcggc 665 Query: 351 gagtacctggacgccaatgcggtgaaggtcatccagggcggccccgcggtgggcgagcag 410 | ||| ||||||||| || |||||||||||||||||||| || | ||| ||||||||| Sbjct: 666 aaatacatggacgccacggccgtgaaggtcatccagggcgggccggaggttggcgagcag 725 Query: 411 ctgatggagcaccaatgggacaaggtcctcttcaccg 447 || ||||| ||| ||||||||||||||| ||||||| Sbjct: 726 ctcatggaacacagatgggacaaggtccttttcaccg 762 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 497 cgaagcacctaacgccggtggcgctggagctgggcgggaagtgcccctgcatcttcga 554 |||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 802 cgaagcacctgacgcccgtggcgcttgagctcggcgggaagtgcccctgcatcttcga 859
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 89.7 bits (45), Expect = 1e-14 Identities = 129/157 (82%) Strand = Plus / Minus Query: 291 gcgctgaagccgtcggagctggcgctgtcaacggccaggttcctggaagagaacataggc 350 ||||||||||| ||||||||||||| | | || || | |||||| | || ||| | ||| Sbjct: 86976 gcgctgaagccatcggagctggcgccggccaccgctaagttcctcggcgacaacgtcggc 86917 Query: 351 gagtacctggacgccaatgcggtgaaggtcatccagggcggccccgcggtgggcgagcag 410 | ||| ||||||||| || |||||||||||||||||||| || | ||| ||||||||| Sbjct: 86916 aaatacatggacgccacggccgtgaaggtcatccagggcgggccggaggttggcgagcag 86857 Query: 411 ctgatggagcaccaatgggacaaggtcctcttcaccg 447 || ||||| ||| ||||||||||||||| ||||||| Sbjct: 86856 ctcatggaacacagatgggacaaggtccttttcaccg 86820 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 497 cgaagcacctaacgccggtggcgctggagctgggcgggaagtgcccctgcatcttcga 554 |||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 86677 cgaagcacctgacgcccgtggcgcttgagctcggcgggaagtgcccctgcatcttcga 86620
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 89.7 bits (45), Expect = 1e-14 Identities = 129/157 (82%) Strand = Plus / Minus Query: 291 gcgctgaagccgtcggagctggcgctgtcaacggccaggttcctggaagagaacataggc 350 ||||||||||| ||||||||||||| | | || || | |||||| | || ||| | ||| Sbjct: 27019275 gcgctgaagccatcggagctggcgccggccaccgctaagttcctcggcgacaacgtcggc 27019216 Query: 351 gagtacctggacgccaatgcggtgaaggtcatccagggcggccccgcggtgggcgagcag 410 | ||| ||||||||| || |||||||||||||||||||| || | ||| ||||||||| Sbjct: 27019215 aaatacatggacgccacggccgtgaaggtcatccagggcgggccggaggttggcgagcag 27019156 Query: 411 ctgatggagcaccaatgggacaaggtcctcttcaccg 447 || ||||| ||| ||||||||||||||| ||||||| Sbjct: 27019155 ctcatggaacacagatgggacaaggtccttttcaccg 27019119 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 497 cgaagcacctaacgccggtggcgctggagctgggcgggaagtgcccctgcatcttcga 554 |||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 27018976 cgaagcacctgacgcccgtggcgcttgagctcggcgggaagtgcccctgcatcttcga 27018919 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gccgccgccacctccctccc 42 |||||||||||||||||||| Sbjct: 6059333 gccgccgccacctccctccc 6059352
>dbj|AK071169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081H03, full insert sequence Length = 2055 Score = 89.7 bits (45), Expect = 1e-14 Identities = 129/157 (82%) Strand = Plus / Plus Query: 291 gcgctgaagccgtcggagctggcgctgtcaacggccaggttcctggaagagaacataggc 350 ||||||||||| ||||||||||||| | | || || | |||||| | || ||| | ||| Sbjct: 747 gcgctgaagccatcggagctggcgccggccaccgctaagttcctcggcgacaacgtcggc 806 Query: 351 gagtacctggacgccaatgcggtgaaggtcatccagggcggccccgcggtgggcgagcag 410 | ||| ||||||||| || |||||||||||||||||||| || | ||| ||||||||| Sbjct: 807 aaatacatggacgccacggccgtgaaggtcatccagggcgggccggaggttggcgagcag 866 Query: 411 ctgatggagcaccaatgggacaaggtcctcttcaccg 447 || ||||| ||| ||||||||||||||| ||||||| Sbjct: 867 ctcatggaacacagatgggacaaggtccttttcaccg 903 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 497 cgaagcacctaacgccggtggcgctggagctgggcgggaagtgcccctgcatcttcga 554 |||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 943 cgaagcacctgacgcccgtggcgcttgagctcggcgggaagtgcccctgcatcttcga 1000
>gb|AY106457.1| Zea mays PCO143299 mRNA sequence Length = 565 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 369 gcggtgaaggtcatccagggcggccccgcggtgggcgagcagctgatggagcaccaatgg 428 |||||||||||| ||||||||||||||| || || | |||||| |||||||||| ||| Sbjct: 76 gcggtgaaggtcgtccagggcggccccgacgtcggagtgcagctcatggagcaccgctgg 135 Query: 429 gacaaggtcctcttcaccg 447 ||||||||||||||||||| Sbjct: 136 gacaaggtcctcttcaccg 154 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 501 gcacctaacgccggtggcgctggagctgggcgggaagtgcccctgcatcttcga 554 |||||| ||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct: 198 gcacctgacgcccgtcgcgctggagctgggcggcaagtgcccctgcatcttcga 251
>ref|XM_467037.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1847 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 352 agtacctggacgccaatgcggtgaaggtcatccagggcggccccgcggtgggcgagcagc 411 |||| |||||||||||||| ||||||||| | |||||||| | | ||| || ||| ||| Sbjct: 642 agtatctggacgccaatgccgtgaaggtcgtacagggcggggcggaggtaggagaggagc 701 Query: 412 tgatggagcaccaatgggacaaggtcctcttcaccg 447 | ||||||||| ||||||||||||||| ||||||| Sbjct: 702 tcatggagcacagatgggacaaggtccttttcaccg 737
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 352 agtacctggacgccaatgcggtgaaggtcatccagggcggccccgcggtgggcgagcagc 411 |||| |||||||||||||| ||||||||| | |||||||| | | ||| || ||| ||| Sbjct: 26056775 agtatctggacgccaatgccgtgaaggtcgtacagggcggggcggaggtaggagaggagc 26056716 Query: 412 tgatggagcaccaatgggacaaggtcctcttcaccg 447 | ||||||||| ||||||||||||||| ||||||| Sbjct: 26056715 tcatggagcacagatgggacaaggtccttttcaccg 26056680
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 352 agtacctggacgccaatgcggtgaaggtcatccagggcggccccgcggtgggcgagcagc 411 |||| |||||||||||||| ||||||||| | |||||||| | | ||| || ||| ||| Sbjct: 64221 agtatctggacgccaatgccgtgaaggtcgtacagggcggggcggaggtaggagaggagc 64162 Query: 412 tgatggagcaccaatgggacaaggtcctcttcaccg 447 | ||||||||| ||||||||||||||| ||||||| Sbjct: 64161 tcatggagcacagatgggacaaggtccttttcaccg 64126
>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030D07 Length = 133321 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 352 agtacctggacgccaatgcggtgaaggtcatccagggcggccccgcggtgggcgagcagc 411 |||| |||||||||||||| ||||||||| | |||||||| | | ||| || ||| ||| Sbjct: 120648 agtatctggacgccaatgccgtgaaggtcgtacagggcggggcggaggtaggagaggagc 120589 Query: 412 tgatggagcaccaatgggacaaggtcctcttcaccg 447 | ||||||||| ||||||||||||||| ||||||| Sbjct: 120588 tcatggagcacagatgggacaaggtccttttcaccg 120553
>dbj|AK070741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063H05, full insert sequence Length = 1847 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 352 agtacctggacgccaatgcggtgaaggtcatccagggcggccccgcggtgggcgagcagc 411 |||| |||||||||||||| ||||||||| | |||||||| | | ||| || ||| ||| Sbjct: 642 agtatctggacgccaatgccgtgaaggtcgtacagggcggggcggaggtaggagaggagc 701 Query: 412 tgatggagcaccaatgggacaaggtcctcttcaccg 447 | ||||||||| ||||||||||||||| ||||||| Sbjct: 702 tcatggagcacagatgggacaaggtccttttcaccg 737
>gb|AY374447.1| Zea mays fatty aldehyde dehydrogenase 1 gene, complete cds Length = 4739 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 352 agtacctggacgccaatgcggtgaaggtcatccagggcggccccgcggtgggcgagcagc 411 ||||||||||| |||| || |||||||| | ||||||| || | |||||| ||| ||| Sbjct: 2199 agtacctggactccaaggccgtgaaggtggtggagggcgggccggaggtgggggagaagc 2258 Query: 412 tgatggagcaccaatgggacaaggtcctcttcac 445 | |||||||||| |||||||||||| |||||||| Sbjct: 2259 tcatggagcaccgatgggacaaggttctcttcac 2292 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 499 aagcacctaacgccggtggcgctggagctgggcgggaagtgcccctgcatcttcga 554 |||||||| || ||||||||||||||||| ||| ||||||||||||||| |||| Sbjct: 3065 aagcacctcaccccggtggcgctggagctcggctccaagtgcccctgcatcgtcga 3120 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 273 gcggcggggaacgccgtggcgctgaagccgtcggagctggcgc 315 ||||| || |||||||||| | |||||||||||||||| |||| Sbjct: 2120 gcggccggcaacgccgtggtggtgaagccgtcggagctcgcgc 2162
>gb|AY107915.1| Zea mays PCO083188 mRNA sequence Length = 1182 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 385 agggcggccccgcggtgggcgagcagctgatggagcaccaatgggacaaggtcctcttca 444 ||||||| || | |||||| ||| |||| |||||||||| |||||||||||| ||||||| Sbjct: 12 agggcgggccggaggtgggggagaagctcatggagcaccgatgggacaaggttctcttca 71 Query: 445 c 445 | Sbjct: 72 c 72 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 499 aagcacctaacgccggtggcgctggagctgggcgggaagtgcccctgcatcttcga 554 |||||||| || ||||||||||||||||| ||| ||||||||||||||| |||| Sbjct: 116 aagcacctcaccccggtggcgctggagctcggctccaagtgcccctgcatcgtcga 171
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 282 aacgccgtggcgctgaagccgtcggagctggcgc 315 |||||||||| |||||||||||||||| |||||| Sbjct: 3951868 aacgccgtggtgctgaagccgtcggaggtggcgc 3951901
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 282 aacgccgtggcgctgaagccgtcggagctggcgc 315 |||||||||| |||||||||||||||| |||||| Sbjct: 3951842 aacgccgtggtgctgaagccgtcggaggtggcgc 3951875
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 282 aacgccgtggcgctgaagccgtcggagctggcgc 315 |||||||||| |||||||||||||||| |||||| Sbjct: 113844 aacgccgtggtgctgaagccgtcggaggtggcgc 113877
>gb|AE005909.1| Caulobacter crescentus CB15 section 235 of 359 of the complete genome Length = 10294 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 513 ggtggcgctggagctgggcgggaag 537 ||||||||||||||||||||||||| Sbjct: 1896 ggtggcgctggagctgggcgggaag 1872
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 22971856 atgccgccgccacctccctccc 22971877 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 22963497 atgccgccgccacctccctccc 22963518 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 22501208 atgccgccgccacctccctccc 22501229 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 13407471 atgccgccgccacctccctccc 13407492 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 ccctccccatcccctcgccgc 56 ||||||||||||||||||||| Sbjct: 4207639 ccctccccatcccctcgccgc 4207659 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 28800033 tgccgccgccacctccctcc 28800014
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 28999293 atgccgccgccacctccctccc 28999272 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 28990858 atgccgccgccacctccctccc 28990837 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cacctccctccccatcccct 50 |||||||||||||||||||| Sbjct: 38329676 cacctccctccccatcccct 38329657 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 33729291 tgccgccgccacctccctcc 33729310
>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047E11 Length = 148109 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 43651 atgccgccgccacctccctccc 43630 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 35216 atgccgccgccacctccctccc 35195
>dbj|AP003254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0454A11 Length = 152240 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 111916 atgccgccgccacctccctccc 111895 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 103481 atgccgccgccacctccctccc 103460
>dbj|AP005296.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1720_F04 Length = 105227 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 44696 atgccgccgccacctccctccc 44717
>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1121_A05 Length = 172668 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 47070 atgccgccgccacctccctccc 47091 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 38711 atgccgccgccacctccctccc 38732
>dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0684A03 Length = 64705 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 atgccgccgccacctccctccc 42 |||||||||||||||||||||| Sbjct: 33230 atgccgccgccacctccctccc 33251
>ref|XM_510621.1| PREDICTED: Pan troglodytes LOC453686 (LOC453686), mRNA Length = 1453 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 513 ggtggcgctggagctgggcgggaagtgcccctgcatc 549 |||| ||||||||||||| |||||| |||||||||| Sbjct: 516 ggtgacgctggagctgggggggaagaacccctgcatc 552
>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold Length = 1743090 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 aggagcagcagtgagccagat 222 ||||||||||||||||||||| Sbjct: 1665078 aggagcagcagtgagccagat 1665058
>gb|BC069274.1| Homo sapiens aldehyde dehydrogenase 1 family, member A3, mRNA (cDNA clone MGC:78582 IMAGE:6208628), complete cds Length = 3462 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 513 ggtggcgctggagctgggcgggaagtgcccctgcatc 549 |||| ||||||||||||| |||||| |||||||||| Sbjct: 884 ggtgacgctggagctgggggggaagaacccctgcatc 920
>gb|AY859780.1| Monacrosporium cystosporum cuticle-degrading serine protease gene, complete cds Length = 1271 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 ggcgctgtcaacggccaggtt 331 ||||||||||||||||||||| Sbjct: 1197 ggcgctgtcaacggccaggtt 1217
>gb|AC093734.3| Homo sapiens BAC clone RP11-16P10 from 7, complete sequence Length = 114085 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 cccagccgcaccagtgcacgt 98 ||||||||||||||||||||| Sbjct: 1842 cccagccgcaccagtgcacgt 1862
>ref|XM_814560.1| Trypanosoma cruzi strain CL Brener retrotransposon hot spot (RHS) protein (Tc00.1047053510463.190) partial mRNA Length = 2757 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 31 cacctccctccccatcccctcgccg 55 ||||||| ||||||||||||||||| Sbjct: 1089 cacctccatccccatcccctcgccg 1065
>gb|AC122841.4| Mus musculus BAC clone RP23-194E5 from 3, complete sequence Length = 200088 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 agcagcagtgagccagatctg 225 ||||||||||||||||||||| Sbjct: 73742 agcagcagtgagccagatctg 73722
>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence Length = 173428 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 513 ggtggcgctggagctgggcgggaagtgcccctgcatc 549 |||| ||||||||||||| |||||| |||||||||| Sbjct: 106421 ggtgacgctggagctgggggggaagaacccctgcatc 106457
>emb|AL021393.1|HS747E2 Human DNA sequence from clone CTA-747E2 on chromosome 22q12.1, complete sequence Length = 109859 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 gcagtgagccagatctgggcc 229 ||||||||||||||||||||| Sbjct: 70987 gcagtgagccagatctgggcc 71007
>emb|BX538027.1|HSM806186 Homo sapiens mRNA; cDNA DKFZp686G1675 (from clone DKFZp686G1675); complete cds Length = 3121 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 513 ggtggcgctggagctgggcgggaagtgcccctgcatc 549 |||| ||||||||||||| |||||| |||||||||| Sbjct: 541 ggtgacgctggagctgggggggaagaacccctgcatc 577
>emb|AJ719792.1| Gallus gallus mRNA for hypothetical protein, clone 6j4 Length = 2689 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 518 cgctggagctgggcgggaagtgcccctgc 546 ||||||||||||| |||||| |||||||| Sbjct: 798 cgctggagctgggtgggaagagcccctgc 826 Score = 40.1 bits (20), Expect = 8.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 253 agccgctgatgggggccatagcggcggggaacgccgtggcgctgaagccgtcggag 308 |||||||||| |||||||| || || || || || |||| | |||||||||||||| Sbjct: 543 agccgctgatcggggccatcgccgcaggcaatgcggtggtggtgaagccgtcggag 598
>gb|AE006465.1| Homo sapiens 16p13.3 sequence section 4 of 8 Length = 278911 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 511 ccggtggcgctggagctgggcggga 535 |||||||||||||||||||| |||| Sbjct: 257170 ccggtggcgctggagctgggaggga 257194
>ref|NM_001006223.1| Gallus gallus aldehyde dehydrogenase 3 family, member A2 (ALDH3A2), mRNA Length = 2689 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 518 cgctggagctgggcgggaagtgcccctgc 546 ||||||||||||| |||||| |||||||| Sbjct: 798 cgctggagctgggtgggaagagcccctgc 826 Score = 40.1 bits (20), Expect = 8.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 253 agccgctgatgggggccatagcggcggggaacgccgtggcgctgaagccgtcggag 308 |||||||||| |||||||| || || || || || |||| | |||||||||||||| Sbjct: 543 agccgctgatcggggccatcgccgcaggcaatgcggtggtggtgaagccgtcggag 598
>gb|AC102953.5| Homo sapiens BAC clone RP11-1246C19 from 7, complete sequence Length = 148996 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 cccagccgcaccagtgcacgt 98 ||||||||||||||||||||| Sbjct: 148838 cccagccgcaccagtgcacgt 148858
>gb|AC009041.10| Homo sapiens chromosome 16 clone RP11-161M6, complete sequence Length = 162342 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 511 ccggtggcgctggagctgggcggga 535 |||||||||||||||||||| |||| Sbjct: 113020 ccggtggcgctggagctgggaggga 113044
>gb|AC146532.3| Otolemur garnettii clone CH256-151F13, complete sequence Length = 197659 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 aggagcagcagtgagccagat 222 ||||||||||||||||||||| Sbjct: 119647 aggagcagcagtgagccagat 119627
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 ccctccccatcccctcgccgc 56 ||||||||||||||||||||| Sbjct: 91261 ccctccccatcccctcgccgc 91281
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 ccctccccatcccctcgccgc 56 ||||||||||||||||||||| Sbjct: 28693 ccctccccatcccctcgccgc 28713
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 514 gtggcgctggagctgggcgggaagt 538 |||||||||||||||||||| |||| Sbjct: 1557845 gtggcgctggagctgggcggcaagt 1557869
>gb|U40486.1|MPU40486 Macroscelides proboscideus cytoplasmic aldehyde dehydrogenase ALDH1-nl mRNA, partial cds Length = 1119 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 ctggagctgggcgggaagtgcccctgcat 548 |||||||||||||| ||| |||||||||| Sbjct: 20 ctggagctgggcggaaagagcccctgcat 48
>ref|NM_000693.1| Homo sapiens aldehyde dehydrogenase 1 family, member A3 (ALDH1A3), mRNA Length = 3442 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 513 ggtggcgctggagctgggcgggaagtgcccctgcatc 549 |||| ||||||||||||| |||||| |||||||||| Sbjct: 880 ggtgacgctggagctgggggggaagaacccctgcatc 916
>gb|U07919.1|HSU07919 Human aldehyde dehydrogenase 6 mRNA, complete cds Length = 3442 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 513 ggtggcgctggagctgggcgggaagtgcccctgcatc 549 |||| ||||||||||||| |||||| |||||||||| Sbjct: 880 ggtgacgctggagctgggggggaagaacccctgcatc 916
>emb|AL031707.19|HS313F9 Human DNA sequence from clone LA16c-313F9 on chromosome 16. Contains four CpG islands, complete sequence Length = 28707 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 511 ccggtggcgctggagctgggcggga 535 |||||||||||||||||||| |||| Sbjct: 5541 ccggtggcgctggagctgggaggga 5565
>gb|DQ213961.1| Taeniopygia guttata clone 0058P0002A04 aldehyde dehydrogenase family 3 subfamily A2 variant 2-like mRNA, complete sequence Length = 1202 Score = 40.1 bits (20), Expect = 8.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 253 agccgctgatgggggccatagcggcggggaacgccgtggcgctgaagccgtcggag 308 |||| ||||| |||||||| || || || || ||||||| | |||||||||||||| Sbjct: 410 agcccctgatcggggccatcgcagcaggcaatgccgtggtggtgaagccgtcggag 465
>gb|DQ213960.1| Taeniopygia guttata clone 0058P0054C04 aldehyde dehydrogenase family 3 subfamily A2 variant 2-like mRNA, complete sequence Length = 1202 Score = 40.1 bits (20), Expect = 8.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 253 agccgctgatgggggccatagcggcggggaacgccgtggcgctgaagccgtcggag 308 |||| ||||| |||||||| || || || || ||||||| | |||||||||||||| Sbjct: 410 agcccctgatcggggccatcgcagcaggcaatgccgtggtggtgaagccgtcggag 465
>ref|NM_190903.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1269 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 519 tgccgccgccacctccctcc 500
>ref|XM_479546.1| Oryza sativa (japonica cultivar-group), mRNA Length = 942 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 886 tgccgccgccacctccctcc 867
>ref|XM_470767.1| Oryza sativa (japonica cultivar-group), mRNA Length = 901 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 agcggcggggaacgccgtgg 291 |||||||||||||||||||| Sbjct: 574 agcggcggggaacgccgtgg 593
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold Length = 1471440 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 1305644 tcctggaagagaacataggc 1305625 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 1169217 tcctggaagagaacataggc 1169198
>gb|AE000664.1|MMAE000664 Mus musculus TCR beta locus from bases 250554 to 501917 (section 2 of 3) of the complete sequence Length = 251364 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 aacctccagtcctgtgtgaa 593 |||||||||||||||||||| Sbjct: 90372 aacctccagtcctgtgtgaa 90353
>gb|AY632757.1| Mycobacterium avium probable CBXX/CFQX family protein (MA3884c) gene, complete cds Length = 1842 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 agccagatctgggccttgtc 234 |||||||||||||||||||| Sbjct: 758 agccagatctgggccttgtc 739
>gb|AC116520.14| Mus musculus chromosome 15, clone RP24-340J12, complete sequence Length = 149118 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 gcagtgagccagatctgggccttg 232 |||| ||||||||||||||||||| Sbjct: 102078 gcagagagccagatctgggccttg 102101
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 agccagatctgggccttgtc 234 |||||||||||||||||||| Sbjct: 4358367 agccagatctgggccttgtc 4358386
>ref|XM_426371.1| PREDICTED: Gallus gallus similar to Aldehyde dehydrogenase 7 (LOC428813), mRNA Length = 2286 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 499 aagcacctaacgccggtggcgctggagctggg 530 |||||||| || |||||| ||||||||||||| Sbjct: 706 aagcacctgacaccggtgacgctggagctggg 737
>ref|XM_426370.1| PREDICTED: Gallus gallus similar to Aldehyde dehydrogenase 7 (LOC428812), mRNA Length = 1536 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 499 aagcacctaacgccggtggcgctggagctggg 530 |||||||| || |||||| ||||||||||||| Sbjct: 730 aagcacctgacaccggtgacgctggagctggg 761
>gb|AC137620.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0014K18, complete sequence Length = 123508 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 cgccgccacctccctcccca 44 |||||||||||||||||||| Sbjct: 87987 cgccgccacctccctcccca 87968
>gb|AC093919.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_D01, complete sequence Length = 112761 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 98255 tgccgccgccacctccctcc 98274
>gb|AC132901.11| Mus musculus chromosome 13, clone RP24-282A18, complete sequence Length = 187090 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ccacctccctccccatcccc 49 |||||||||||||||||||| Sbjct: 28517 ccacctccctccccatcccc 28536
>gb|AC092497.2| Sus scrofa clone RP44-30C22, complete sequence Length = 172144 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 6348 tcctggaagagaacataggc 6329
>gb|AC092478.2| Sus scrofa clone RP44-360A14, complete sequence Length = 161008 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 30781 tcctggaagagaacataggc 30762
>gb|AC087860.2| Bos taurus clone RP42-135P2, complete sequence Length = 203696 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 gccacctccctccccatccc 48 |||||||||||||||||||| Sbjct: 73589 gccacctccctccccatccc 73570
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 gccacctccctccccatccc 48 |||||||||||||||||||| Sbjct: 664093 gccacctccctccccatccc 664074
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agcggcggggaacgccgtgg 291 |||||||||||||||||||| Sbjct: 14965764 agcggcggggaacgccgtgg 14965745 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 1228686 tgccgccgccacctccctcc 1228667
>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete sequence Length = 137184 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 agcggcggggaacgccgtgg 291 |||||||||||||||||||| Sbjct: 76998 agcggcggggaacgccgtgg 77017
>gb|AC139340.3| Atelerix albiventris clone LB4-108K18, complete sequence Length = 163566 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 tctgggccttgtcgaggagg 241 |||||||||||||||||||| Sbjct: 62210 tctgggccttgtcgaggagg 62191
>gb|AC125228.4| Mus musculus BAC clone RP23-45H9 from chromosome 6, complete sequence Length = 261600 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 aacctccagtcctgtgtgaa 593 |||||||||||||||||||| Sbjct: 156508 aacctccagtcctgtgtgaa 156489
>emb|CT009551.8| Pig DNA sequence from clone CH242-214G8 on chromosome 17, complete sequence Length = 239237 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 203905 tcctggaagagaacataggc 203886 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 132295 tcctggaagagaacataggc 132314
>emb|CR956426.6| Pig DNA sequence from clone CH242-42M23 on chromosome 17, complete sequence Length = 135274 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 111094 tcctggaagagaacataggc 111075
>emb|CR938718.3| Pig DNA sequence from clone CH242-2F11, complete sequence Length = 170585 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 24722 tcctggaagagaacataggc 24741
>gb|AC165347.4| Mus musculus BAC clone RP23-348B21 from chromosome 13, complete sequence Length = 205783 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ccacctccctccccatcccc 49 |||||||||||||||||||| Sbjct: 6808 ccacctccctccccatcccc 6789
>emb|CR956417.1| Pig DNA sequence from clone CH242-300K12 on chromosome 17, complete sequence Length = 176004 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 165274 tcctggaagagaacataggc 165255
>emb|CR974458.2| Pig DNA sequence from clone CH242-29M17 on chromosome 17, complete sequence Length = 177939 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 119850 tcctggaagagaacataggc 119831
>emb|AL691447.18| Human DNA sequence from clone RP11-307E17 on chromosome 9 Contains the gene for zinc finger protein 169, a voltage-dependent anion channel 1 (VDAC1) pseudogene, a novel gene (DKFZp434I1117), a novel pseudogene, a novel gene, the 5' end of a gene for a novel protein similar to mouse hippocampus abundant gene transcript 1(HIAT1) and three CpG islands, complete sequence Length = 171255 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 tggagcaccaatgggacaag 434 |||||||||||||||||||| Sbjct: 110720 tggagcaccaatgggacaag 110739
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 cgccaatgcggtgaaggtca 381 |||||||||||||||||||| Sbjct: 2493414 cgccaatgcggtgaaggtca 2493395
>emb|AL355485.9| Human DNA sequence from clone RP11-240M20 on chromosome 13, complete sequence Length = 149684 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ttcctggaagagaacatagg 349 |||||||||||||||||||| Sbjct: 85531 ttcctggaagagaacatagg 85512
>emb|AL049843.18|HSJ392M17 Human DNA sequence from clone RP3-392M17 on chromosome 6p12.3-21.2 Contains an ATPase H+ transporting lysosomal (ATP6C) pseudogene, the RDS gene for retinal degeneration slow (retinitis pigmentosa 7), the 3' end of the UBR2 gene for ubiquitin protein ligase E3 component n-recognin 2 and a CpG island, complete sequence Length = 110900 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 cctccctccccatcccctcg 52 |||||||||||||||||||| Sbjct: 41269 cctccctccccatcccctcg 41250
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 agccagatctgggccttgtc 234 |||||||||||||||||||| Sbjct: 199331 agccagatctgggccttgtc 199350
>gb|BC099838.1| Mus musculus cDNA clone MGC:106592 IMAGE:5703010, complete cds Length = 4849 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 gcagtgagccagatctgggccttg 232 |||| ||||||||||||||||||| Sbjct: 3499 gcagagagccagatctgggccttg 3522
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 agccagatctgggccttgtc 234 |||||||||||||||||||| Sbjct: 235428 agccagatctgggccttgtc 235447
>dbj|AK095188.1| Homo sapiens cDNA FLJ37869 fis, clone BRSSN2017422 Length = 2162 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 tggagcaccaatgggacaag 434 |||||||||||||||||||| Sbjct: 1138 tggagcaccaatgggacaag 1157
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 cgctggagctgggcgggaag 537 |||||||||||||||||||| Sbjct: 1803553 cgctggagctgggcgggaag 1803572
>gb|AC087863.10| Homo sapiens 12q BAC RP11-357K6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179876 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 aggttcctggaagagaacat 346 |||||||||||||||||||| Sbjct: 83715 aggttcctggaagagaacat 83734
>emb|CR450381.1| Pig DNA sequence from clone PigE-108A11, complete sequence Length = 123687 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 7432 tcctggaagagaacataggc 7413
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 tctgggccttgtcgaggagg 241 |||||||||||||||||||| Sbjct: 2034911 tctgggccttgtcgaggagg 2034892
>dbj|AK036241.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630047N16 product:hypothetical protein, full insert sequence Length = 4778 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 gcagtgagccagatctgggccttg 232 |||| ||||||||||||||||||| Sbjct: 3474 gcagagagccagatctgggccttg 3497
>gb|DP000030.1| Sus scrofa target 116 genomic scaffold Length = 380805 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 337666 tcctggaagagaacataggc 337647
>dbj|AK041150.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530085O15 product:weakly similar to ALDEHYDE DEHYDROGENASE 8 (EC 1.2.1.5) [Homo sapiens], full insert sequence Length = 2151 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 499 aagcacctaacgccggtggcgctggagctgggcgggaagt 538 |||||| | |||||||||| ||| ||||||||||| |||| Sbjct: 1001 aagcacatgacgccggtggtgctagagctgggcggcaagt 1040
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 16903292 tgccgccgccacctccctcc 16903273
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 22144274 tgccgccgccacctccctcc 22144293 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 cgccgccacctccctcccca 44 |||||||||||||||||||| Sbjct: 19835363 cgccgccacctccctcccca 19835344
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agcggcggggaacgccgtgg 291 |||||||||||||||||||| Sbjct: 14960298 agcggcggggaacgccgtgg 14960279 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 1228684 tgccgccgccacctccctcc 1228665
>emb|AL662939.4|OSJN00143 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0013J13, complete sequence Length = 137572 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gccgccgccacctccctccc 42 |||||||||||||||||||| Sbjct: 82730 gccgccgccacctccctccc 82749
>dbj|AP006185.1| Sus scrofa CC chemokine receptor genes (CCR2, CCR5, CCRL2, LTF, TMEM7, LRRC2), complete cds, clone: 0475A03 Length = 165558 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 127764 tcctggaagagaacataggc 127745
>gb|AC007909.8| Homo sapiens chromosome 16 clone RP11-515G11, complete sequence Length = 183149 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 aggagcagcagtgagccagatctg 225 |||||||||||| ||||||||||| Sbjct: 51356 aggagcagcagttagccagatctg 51333
>gb|AE004903.1| Pseudomonas aeruginosa PAO1, section 464 of 529 of the complete genome Length = 12460 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gtggcgctggagctgggcgg 533 |||||||||||||||||||| Sbjct: 2174 gtggcgctggagctgggcgg 2155
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cacctccctccccatcccct 50 |||||||||||||||||||| Sbjct: 90501 cacctccctccccatcccct 90482
>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12, complete sequence Length = 146241 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 33588 tgccgccgccacctccctcc 33569
>dbj|AP005243.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1205_F02 Length = 112862 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 107594 tgccgccgccacctccctcc 107575
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 57719 tgccgccgccacctccctcc 57700
>gb|DQ020486.1| Sus scrofa clone BAC KNP_290F2, complete sequence Length = 123277 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 96446 tcctggaagagaacataggc 96465
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tgcaggcgatgccgagcccg 137 |||||||||||||||||||| Sbjct: 2235236 tgcaggcgatgccgagcccg 2235255
>dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699H05 Length = 144850 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 82361 tgccgccgccacctccctcc 82380
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 33105 tgccgccgccacctccctcc 33086
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1163_C07 Length = 107121 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tgccgccgccacctccctcc 41 |||||||||||||||||||| Sbjct: 100983 tgccgccgccacctccctcc 100964
>dbj|AK108125.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-D04, full insert sequence Length = 900 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 agcggcggggaacgccgtgg 291 |||||||||||||||||||| Sbjct: 574 agcggcggggaacgccgtgg 593
>gb|AC006196.3|AC006196 Homo sapiens, clone hRPK.1_A_1, complete sequence Length = 181949 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 gcaatttggcagggtgcctg 466 |||||||||||||||||||| Sbjct: 72375 gcaatttggcagggtgcctg 72394
>gb|AF148877.1|AF148877 Oryza sativa subsp. indica putative aldehyde dehydrogenase OS-ALDH mRNA, complete cds Length = 1757 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 352 agtacctggacgccaatgcggtgaaggtcatccagggcgg 391 |||| ||||||||||| || ||||||||| | |||||||| Sbjct: 524 agtatctggacgccaaggccgtgaaggtcgtacagggcgg 563
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 cgctggagctgggcgggaag 537 |||||||||||||||||||| Sbjct: 2751457 cgctggagctgggcgggaag 2751476
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 511 ccggtggcgctggagctgggcgggaagt 538 |||||| |||||||||||||||| |||| Sbjct: 409488 ccggtgacgctggagctgggcggcaagt 409515
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 agccagatctgggccttgtc 234 |||||||||||||||||||| Sbjct: 171223 agccagatctgggccttgtc 171204
>emb|CT476832.2| Pig DNA sequence from clone XX-BE284E13 on chromosome 11, complete sequence Length = 180778 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 178999 tcctggaagagaacataggc 179018
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 gccgtggcgctgaagccgtcggag 308 ||||||||||| |||||||||||| Sbjct: 3046658 gccgtggcgctcaagccgtcggag 3046635 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gctgaagccgtcggagctgg 312 |||||||||||||||||||| Sbjct: 1167784 gctgaagccgtcggagctgg 1167765
>emb|CT476833.2| Pig DNA sequence from clone XX-BE151C22 on chromosome 11, complete sequence Length = 167074 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 tcctggaagagaacataggc 350 |||||||||||||||||||| Sbjct: 221 tcctggaagagaacataggc 240
>emb|CT009704.12| Mouse DNA sequence from clone RP23-115B21 on chromosome 16, complete sequence Length = 226520 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 cctccctccccatcccctcgccgc 56 ||||||||||||||||||| |||| Sbjct: 97644 cctccctccccatcccctccccgc 97621
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 511 ccggtggcgctggagctgggcgggaagt 538 |||||| |||||||||||||||| |||| Sbjct: 4564284 ccggtgacgctggagctgggcggtaagt 4564257
>ref|NM_178646.2| Mus musculus tigger transposable element derived 5 (Tigd5), mRNA Length = 4778 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 gcagtgagccagatctgggccttg 232 |||| ||||||||||||||||||| Sbjct: 3474 gcagagagccagatctgggccttg 3497
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 511 ccggtggcgctggagctgggcgggaagt 538 |||||| |||||||||||||||| |||| Sbjct: 4497055 ccggtgacgctggagctgggcggtaagt 4497028
>emb|AL772369.6| Human DNA sequence from clone RP11-395L9 on chromosome 9, complete sequence Length = 71591 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 tggagcaccaatgggacaag 434 |||||||||||||||||||| Sbjct: 20954 tggagcaccaatgggacaag 20973
>emb|AL772267.9| Human DNA sequence from clone RP13-37K15 on chromosome 9, complete sequence Length = 115952 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 tggagcaccaatgggacaag 434 |||||||||||||||||||| Sbjct: 67307 tggagcaccaatgggacaag 67326
>gb|M74003.1|AFAACOD Alcaligenes eutrophus acetaldehyde dehydrogenase II (acoD) gene, complete cds Length = 2822 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 511 ccggtggcgctggagctgggcgggaagt 538 |||||| |||||||||||||||| |||| Sbjct: 1154 ccggtgacgctggagctgggcggcaagt 1181 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,655,200 Number of Sequences: 3902068 Number of extensions: 4655200 Number of successful extensions: 97330 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95221 Number of HSP's gapped (non-prelim): 2109 length of query: 609 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 586 effective length of database: 17,143,297,704 effective search space: 10045972454544 effective search space used: 10045972454544 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)