ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalo06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466209.1| Oryza sativa (japonica cultivar-group), mRNA 341 2e-90
2dbj|AK066206.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 2e-90
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 214 2e-52
4dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic D... 214 2e-52
5gb|AY108601.1| Zea mays PCO078135 mRNA sequence 115 2e-22
6gb|BT019134.1| Zea mays clone Contig770.F mRNA sequence 66 1e-07
7gb|AC114917.2| Mus musculus chromosome 8 clone RP23-84K6, comple... 42 2.0
8gb|AC183388.3| Pan troglodytes BAC clone CH251-53D20 from chromo... 42 2.0
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
10emb|AL844152.9| Zebrafish DNA sequence from clone DKEY-37L7, com... 42 2.0
11dbj|AK106090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
12dbj|AK105784.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
13dbj|AK099164.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
14dbj|AK061470.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
15dbj|AK061448.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
16dbj|AK061444.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
17gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 2.0
18gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
19emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb... 42 2.0
20emb|AL591003.16| Mouse DNA sequence from clone RP23-354I24 on ch... 42 2.0
21ref|NM_011904.1| Mus musculus tolloid-like 2 (Tll2), mRNA 40 7.7
22gb|BT018437.1| Zea mays clone EL01N0372E07.d mRNA sequence 40 7.7
23ref|XM_706207.1| Candida albicans SC5314 putative actin assembly... 40 7.7
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.7
25gb|AC159002.2| Mus musculus BAC clone RP23-203D7 from chromosome... 40 7.7
26ref|XM_538469.2| PREDICTED: Canis familiaris similar to CG8233-P... 40 7.7
27ref|XM_846451.1| PREDICTED: Canis familiaris similar to CG8233-P... 40 7.7
28gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.7
29ref|XM_502463.1| Yarrowia lipolytica CLIB122, YALI0D05929g predi... 40 7.7
30gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 7.7
31emb|AJ864711.1| Zea mays mRNA for alpha-6-galactosyltransferase ... 40 7.7
32gb|AC163900.3| Mus musculus BAC clone RP23-151K15 from chromosom... 40 7.7
33dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
34dbj|AB086653.1| Streptomyces halstedii vicenistatin biosynthetic... 40 7.7
35emb|AJ323286.1|HSA323286 Homo sapiens genomic sequence surroundi... 40 7.7
36gb|AF073526.1|AF073526 Mus musculus tolloid-like-2 protein (Tll2... 40 7.7
37gb|AC139752.4| Mus musculus BAC clone RP24-258K1 from 12, comple... 40 7.7
38emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 7.7
39dbj|AB028218.1| Papilio xuthus PxRh5 mRNA for UV opsin, partial cds 40 7.7 
>ref|XM_466209.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1982

 Score =  341 bits (172), Expect = 2e-90
 Identities = 364/428 (85%)
 Strand = Plus / Plus

                                                                       
Query: 139 ctggcgtcgcggtggcggtccccggcggaatgggttgccaccgcagcggcactggactcg 198
           |||||||||||||||||||| |||||||| ||||  ||| | || || |   ||||  ||
Sbjct: 258 ctggcgtcgcggtggcggtcgccggcggagtggggggccgcggcggccgagatggaggcg 317

                                                                       
Query: 199 gagcccatgccatccgagctcaacaccgccaacagctcgggcctctttgcagtcgtgtcc 258
           |||||   ||| ||||||||||||||| ||||||||||||||||||| || ||||| || 
Sbjct: 318 gagccggcgccgtccgagctcaacaccaccaacagctcgggcctcttcgccgtcgtctct 377

                                                                       
Query: 259 attgacaagatgtccgtcaagtacctcggcgtcaaccaccacggccatgacgtcggagtc 318
           |  |||  ||||||||||| |||||||||||||||||| |||||||| |||||||| |||
Sbjct: 378 accgaccggatgtccgtcaggtacctcggcgtcaaccagcacggccacgacgtcggcgtc 437

                                                                       
Query: 319 gtgcaggccgactgccccgctcccatgcgccgagctgtctactactttgagatgactgtc 378
           ||||||||| || ||||||| |||| |||||| || ||||||||||| ||||||   |||
Sbjct: 438 gtgcaggccaaccgccccgcccccacgcgccgcgccgtctactacttcgagatgggcgtc 497

                                                                       
Query: 379 aggaatgctggactcaagggccagacctccatcggcttcaccaccgagagcttcaagatg 438
           | ||| || || |  ||||| ||||||||||||||||||||||||||||  |||||||||
Sbjct: 498 aagaacgccggccagaaggggcagacctccatcggcttcaccaccgagaatttcaagatg 557

                                                                       
Query: 439 cggcgccaacctggttgggaatctcaaagttgtggataccatggcgatgatggctatctt 498
           || ||||| || || ||||| ||| | || |||||||| |||||||||||||||||||||
Sbjct: 558 cgccgccagcccggctgggagtctaacagctgtggatatcatggcgatgatggctatctt 617

                                                                       
Query: 499 taccggggtccagggaaaagtgagtcatttggtcccaaattcacatcaggcgacataatt 558
           ||||| ||||| |||||||||||||||||||||||||||||||| || || |||| ||||
Sbjct: 618 taccgtggtcctgggaaaagtgagtcatttggtcccaaattcacttctggtgacacaatt 677

                   
Query: 559 ggtgctgg 566
           ||||||||
Sbjct: 678 ggtgctgg 685
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>dbj|AK066206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056D20, full
           insert sequence
          Length = 1982

 Score =  341 bits (172), Expect = 2e-90
 Identities = 364/428 (85%)
 Strand = Plus / Plus

                                                                       
Query: 139 ctggcgtcgcggtggcggtccccggcggaatgggttgccaccgcagcggcactggactcg 198
           |||||||||||||||||||| |||||||| ||||  ||| | || || |   ||||  ||
Sbjct: 258 ctggcgtcgcggtggcggtcgccggcggagtggggggccgcggcggccgagatggaggcg 317

                                                                       
Query: 199 gagcccatgccatccgagctcaacaccgccaacagctcgggcctctttgcagtcgtgtcc 258
           |||||   ||| ||||||||||||||| ||||||||||||||||||| || ||||| || 
Sbjct: 318 gagccggcgccgtccgagctcaacaccaccaacagctcgggcctcttcgccgtcgtctct 377

                                                                       
Query: 259 attgacaagatgtccgtcaagtacctcggcgtcaaccaccacggccatgacgtcggagtc 318
           |  |||  ||||||||||| |||||||||||||||||| |||||||| |||||||| |||
Sbjct: 378 accgaccggatgtccgtcaggtacctcggcgtcaaccagcacggccacgacgtcggcgtc 437

                                                                       
Query: 319 gtgcaggccgactgccccgctcccatgcgccgagctgtctactactttgagatgactgtc 378
           ||||||||| || ||||||| |||| |||||| || ||||||||||| ||||||   |||
Sbjct: 438 gtgcaggccaaccgccccgcccccacgcgccgcgccgtctactacttcgagatgggcgtc 497

                                                                       
Query: 379 aggaatgctggactcaagggccagacctccatcggcttcaccaccgagagcttcaagatg 438
           | ||| || || |  ||||| ||||||||||||||||||||||||||||  |||||||||
Sbjct: 498 aagaacgccggccagaaggggcagacctccatcggcttcaccaccgagaatttcaagatg 557

                                                                       
Query: 439 cggcgccaacctggttgggaatctcaaagttgtggataccatggcgatgatggctatctt 498
           || ||||| || || ||||| ||| | || |||||||| |||||||||||||||||||||
Sbjct: 558 cgccgccagcccggctgggagtctaacagctgtggatatcatggcgatgatggctatctt 617

                                                                       
Query: 499 taccggggtccagggaaaagtgagtcatttggtcccaaattcacatcaggcgacataatt 558
           ||||| ||||| |||||||||||||||||||||||||||||||| || || |||| ||||
Sbjct: 618 taccgtggtcctgggaaaagtgagtcatttggtcccaaattcacttctggtgacacaatt 677

                   
Query: 559 ggtgctgg 566
           ||||||||
Sbjct: 678 ggtgctgg 685
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  214 bits (108), Expect = 2e-52
 Identities = 258/308 (83%)
 Strand = Plus / Minus

                                                                            
Query: 139      ctggcgtcgcggtggcggtccccggcggaatgggttgccaccgcagcggcactggactcg 198
                |||||||||||||||||||| |||||||| ||||  ||| | || || |   ||||  ||
Sbjct: 21069355 ctggcgtcgcggtggcggtcgccggcggagtggggggccgcggcggccgagatggaggcg 21069296

                                                                            
Query: 199      gagcccatgccatccgagctcaacaccgccaacagctcgggcctctttgcagtcgtgtcc 258
                |||||   ||| ||||||||||||||| ||||||||||||||||||| || ||||| || 
Sbjct: 21069295 gagccggcgccgtccgagctcaacaccaccaacagctcgggcctcttcgccgtcgtctct 21069236

                                                                            
Query: 259      attgacaagatgtccgtcaagtacctcggcgtcaaccaccacggccatgacgtcggagtc 318
                |  |||  ||||||||||| |||||||||||||||||| |||||||| |||||||| |||
Sbjct: 21069235 accgaccggatgtccgtcaggtacctcggcgtcaaccagcacggccacgacgtcggcgtc 21069176

                                                                            
Query: 319      gtgcaggccgactgccccgctcccatgcgccgagctgtctactactttgagatgactgtc 378
                ||||||||| || ||||||| |||| |||||| || ||||||||||| ||||||   |||
Sbjct: 21069175 gtgcaggccaaccgccccgcccccacgcgccgcgccgtctactacttcgagatgggcgtc 21069116

                                                                            
Query: 379      aggaatgctggactcaagggccagacctccatcggcttcaccaccgagagcttcaagatg 438
                | ||| || || |  ||||| ||||||||||||||||||||||||||||  |||||||||
Sbjct: 21069115 aagaacgccggccagaaggggcagacctccatcggcttcaccaccgagaatttcaagatg 21069056

                        
Query: 439      cggcgcca 446
                || |||||
Sbjct: 21069055 cgccgcca 21069048



 Score =  139 bits (70), Expect = 1e-29
 Identities = 91/98 (92%)
 Strand = Plus / Minus

                                                                            
Query: 469      tgtggataccatggcgatgatggctatctttaccggggtccagggaaaagtgagtcattt 528
                |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 21067783 tgtggatatcatggcgatgatggctatctttaccgtggtcctgggaaaagtgagtcattt 21067724

                                                      
Query: 529      ggtcccaaattcacatcaggcgacataattggtgctgg 566
                |||||||||||||| || || |||| ||||||||||||
Sbjct: 21067723 ggtcccaaattcacttctggtgacacaattggtgctgg 21067686
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>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_F08
          Length = 105979

 Score =  214 bits (108), Expect = 2e-52
 Identities = 258/308 (83%)
 Strand = Plus / Minus

                                                                         
Query: 139   ctggcgtcgcggtggcggtccccggcggaatgggttgccaccgcagcggcactggactcg 198
             |||||||||||||||||||| |||||||| ||||  ||| | || || |   ||||  ||
Sbjct: 71100 ctggcgtcgcggtggcggtcgccggcggagtggggggccgcggcggccgagatggaggcg 71041

                                                                         
Query: 199   gagcccatgccatccgagctcaacaccgccaacagctcgggcctctttgcagtcgtgtcc 258
             |||||   ||| ||||||||||||||| ||||||||||||||||||| || ||||| || 
Sbjct: 71040 gagccggcgccgtccgagctcaacaccaccaacagctcgggcctcttcgccgtcgtctct 70981

                                                                         
Query: 259   attgacaagatgtccgtcaagtacctcggcgtcaaccaccacggccatgacgtcggagtc 318
             |  |||  ||||||||||| |||||||||||||||||| |||||||| |||||||| |||
Sbjct: 70980 accgaccggatgtccgtcaggtacctcggcgtcaaccagcacggccacgacgtcggcgtc 70921

                                                                         
Query: 319   gtgcaggccgactgccccgctcccatgcgccgagctgtctactactttgagatgactgtc 378
             ||||||||| || ||||||| |||| |||||| || ||||||||||| ||||||   |||
Sbjct: 70920 gtgcaggccaaccgccccgcccccacgcgccgcgccgtctactacttcgagatgggcgtc 70861

                                                                         
Query: 379   aggaatgctggactcaagggccagacctccatcggcttcaccaccgagagcttcaagatg 438
             | ||| || || |  ||||| ||||||||||||||||||||||||||||  |||||||||
Sbjct: 70860 aagaacgccggccagaaggggcagacctccatcggcttcaccaccgagaatttcaagatg 70801

                     
Query: 439   cggcgcca 446
             || |||||
Sbjct: 70800 cgccgcca 70793



 Score =  139 bits (70), Expect = 1e-29
 Identities = 91/98 (92%)
 Strand = Plus / Minus

                                                                         
Query: 469   tgtggataccatggcgatgatggctatctttaccggggtccagggaaaagtgagtcattt 528
             |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 69528 tgtggatatcatggcgatgatggctatctttaccgtggtcctgggaaaagtgagtcattt 69469

                                                   
Query: 529   ggtcccaaattcacatcaggcgacataattggtgctgg 566
             |||||||||||||| || || |||| ||||||||||||
Sbjct: 69468 ggtcccaaattcacttctggtgacacaattggtgctgg 69431
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>gb|AY108601.1| Zea mays PCO078135 mRNA sequence
          Length = 1453

 Score =  115 bits (58), Expect = 2e-22
 Identities = 145/174 (83%)
 Strand = Plus / Plus

                                                                       
Query: 393 caagggccagacctccatcggcttcaccaccgagagcttcaagatgcggcgccaacctgg 452
           |||||| ||||| ||||| || ||||| | |||||||||||||||| |||| ||||| ||
Sbjct: 34  caaggggcagacatccatagggttcacgagcgagagcttcaagatgaggcgacaaccggg 93

                                                                       
Query: 453 ttgggaatctcaaagttgtggataccatggcgatgatggctatctttaccggggtccagg 512
           |||||| ||  | ||||||||||||||||| || || ||| | ||||||||||||| |||
Sbjct: 94  ttgggagtcaaacagttgtggataccatggtgacgacggccacctttaccggggtctagg 153

                                                                 
Query: 513 gaaaagtgagtcatttggtcccaaattcacatcaggcgacataattggtgctgg 566
           |||| | ||  | ||||| || ||||||||||| || ||||||||||| |||||
Sbjct: 154 gaaaggcgaaccgtttgggccaaaattcacatctggtgacataattggcgctgg 207
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>gb|BT019134.1| Zea mays clone Contig770.F mRNA sequence
          Length = 1307

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                       
Query: 466 agttgtggataccatggcgatgatggctatctttaccggggtccagggaaaagtgagtca 525
           ||||||||||||||||| ||  | ||| | ||||||||||||| ||||||| | ||  | 
Sbjct: 34  agttgtggataccatggtgaccacggccacctttaccggggtctagggaaaggcgaaccg 93

                                                    
Query: 526 tttggtcccaaattcacatcaggcgacataattggtgctgg 566
           ||||| || ||||||||||| || ||||||||||| |||||
Sbjct: 94  tttgggccaaaattcacatctggtgacataattggcgctgg 134
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>gb|AC114917.2| Mus musculus chromosome 8 clone RP23-84K6, complete sequence
          Length = 181442

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 377   tcaggaatgctggactcaagg 397
             |||||||||||||||||||||
Sbjct: 37364 tcaggaatgctggactcaagg 37344
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>gb|AC183388.3| Pan troglodytes BAC clone CH251-53D20 from chromosome 16, complete
             sequence
          Length = 161327

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   ctctttgcagtcgtgtccatt 261
             |||||||||||||||||||||
Sbjct: 29618 ctctttgcagtcgtgtccatt 29598
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 403     acctccatcggcttcaccacc 423
               |||||||||||||||||||||
Sbjct: 4145514 acctccatcggcttcaccacc 4145534



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 403     acctccatcggcttcaccacc 423
               |||||||||||||||||||||
Sbjct: 4120067 acctccatcggcttcaccacc 4120047
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>emb|AL844152.9| Zebrafish DNA sequence from clone DKEY-37L7, complete sequence
          Length = 180395

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 367    gagatgactgtcaggaatgctggac 391
              |||| ||||||||||||||||||||
Sbjct: 106487 gagaagactgtcaggaatgctggac 106463
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>dbj|AK106090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B07, full
           insert sequence
          Length = 1715

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 403 acctccatcggcttcaccacc 423
           |||||||||||||||||||||
Sbjct: 133 acctccatcggcttcaccacc 113
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>dbj|AK105784.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G09, full
           insert sequence
          Length = 1773

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 403 acctccatcggcttcaccacc 423
           |||||||||||||||||||||
Sbjct: 111 acctccatcggcttcaccacc 91
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>dbj|AK099164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O03, full
           insert sequence
          Length = 1709

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 403 acctccatcggcttcaccacc 423
           |||||||||||||||||||||
Sbjct: 136 acctccatcggcttcaccacc 116
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>dbj|AK061470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D07, full
           insert sequence
          Length = 1797

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 403 acctccatcggcttcaccacc 423
           |||||||||||||||||||||
Sbjct: 113 acctccatcggcttcaccacc 93
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>dbj|AK061448.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-E03, full
           insert sequence
          Length = 1725

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 403 acctccatcggcttcaccacc 423
           |||||||||||||||||||||
Sbjct: 134 acctccatcggcttcaccacc 114
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>dbj|AK061444.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-C11, full
           insert sequence
          Length = 1662

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 403 acctccatcggcttcaccacc 423
           |||||||||||||||||||||
Sbjct: 111 acctccatcggcttcaccacc 91
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    gcgatgcgcctggcgtcgcgg 150
              |||||||||||||||||||||
Sbjct: 432147 gcgatgcgcctggcgtcgcgg 432167
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 403     acctccatcggcttcaccacc 423
               |||||||||||||||||||||
Sbjct: 4145501 acctccatcggcttcaccacc 4145521



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 403     acctccatcggcttcaccacc 423
               |||||||||||||||||||||
Sbjct: 4120054 acctccatcggcttcaccacc 4120034
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>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 123469

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 403   acctccatcggcttcaccacc 423
             |||||||||||||||||||||
Sbjct: 87910 acctccatcggcttcaccacc 87930



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 403   acctccatcggcttcaccacc 423
             |||||||||||||||||||||
Sbjct: 62463 acctccatcggcttcaccacc 62443
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>emb|AL591003.16| Mouse DNA sequence from clone RP23-354I24 on chromosome 13, complete
              sequence
          Length = 221647

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 377    tcaggaatgctggactcaagg 397
              |||||||||||||||||||||
Sbjct: 206253 tcaggaatgctggactcaagg 206233
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>ref|NM_011904.1| Mus musculus tolloid-like 2 (Tll2), mRNA
          Length = 4661

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 239  gcctctttgcagtcgtgtcc 258
            ||||||||||||||||||||
Sbjct: 2502 gcctctttgcagtcgtgtcc 2483
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>gb|BT018437.1| Zea mays clone EL01N0372E07.d mRNA sequence
          Length = 1231

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 76  atggtggcgcaccaggaggcggag 99
           ||||||||||||| ||||||||||
Sbjct: 390 atggtggcgcacccggaggcggag 413
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>ref|XM_706207.1| Candida albicans SC5314 putative actin assembly factor (CaO19.6598),
            mRNA
          Length = 2346

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 417  caccaccgagagcttcaaga 436
            ||||||||||||||||||||
Sbjct: 1547 caccaccgagagcttcaaga 1566
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 76       atggtggcgcaccaggaggcggag 99
                ||||||||||||| ||||||||||
Sbjct: 10837095 atggtggcgcacccggaggcggag 10837118
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>gb|AC159002.2| Mus musculus BAC clone RP23-203D7 from chromosome 14, complete sequence
          Length = 181842

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 362    actttgagatgactgtcagg 381
              ||||||||||||||||||||
Sbjct: 130047 actttgagatgactgtcagg 130028
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>ref|XM_538469.2| PREDICTED: Canis familiaris similar to CG8233-PC, isoform C,
            transcript variant 1 (LOC481348), mRNA
          Length = 3904

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  gcaggccgactgccccgctc 340
            ||||||||||||||||||||
Sbjct: 1717 gcaggccgactgccccgctc 1698
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>ref|XM_846451.1| PREDICTED: Canis familiaris similar to CG8233-PC, isoform C,
            transcript variant 2 (LOC481348), mRNA
          Length = 3799

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  gcaggccgactgccccgctc 340
            ||||||||||||||||||||
Sbjct: 1627 gcaggccgactgccccgctc 1608
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>gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1275B08,
             from chromosome 3, complete sequence
          Length = 108833

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    atggtggcgcaccaggaggcggag 99
             ||||||||||||| ||||||||||
Sbjct: 17792 atggtggcgcacccggaggcggag 17769
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>ref|XM_502463.1| Yarrowia lipolytica CLIB122, YALI0D05929g predicted mRNA
          Length = 747

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 ggagcccatgccatccgagc 217
           ||||||||||||||||||||
Sbjct: 529 ggagcccatgccatccgagc 548
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 410     tcggcttcaccaccgagagc 429
               ||||||||||||||||||||
Sbjct: 1123014 tcggcttcaccaccgagagc 1123033
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>emb|AJ864711.1| Zea mays mRNA for alpha-6-galactosyltransferase (x34.3 gene)
          Length = 1491

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 76  atggtggcgcaccaggaggcggag 99
           ||||||||||||| ||||||||||
Sbjct: 532 atggtggcgcacccggaggcggag 555
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>gb|AC163900.3| Mus musculus BAC clone RP23-151K15 from chromosome 12, complete
           sequence
          Length = 200606

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 caggaatgctggactcaagg 397
           ||||||||||||||||||||
Sbjct: 151 caggaatgctggactcaagg 170
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 76       atggtggcgcaccaggaggcggag 99
                ||||||||||||| ||||||||||
Sbjct: 10835196 atggtggcgcacccggaggcggag 10835219
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>dbj|AB086653.1| Streptomyces halstedii vicenistatin biosynthetic gene cluster (vinR1,
             vinA, vinB, vinC, vinP2, vinP3, vinP4, vinG, vinF, vinD,
             vinE, vinH, vinI, vinJ, vinK, vinL, vinM, vinN, vinO,
             vinP1), partial and complete cds
          Length = 64492

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 169   tgggttgccaccgcagcggcactggact 196
             ||||| |||||||| |||||||||||||
Sbjct: 34867 tgggtggccaccgcggcggcactggact 34840
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>emb|AJ323286.1|HSA323286 Homo sapiens genomic sequence surrounding NotI site, clone NB1-340R
          Length = 900

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 143 cgtcgcggtggcggtccccg 162
           ||||||||||||||||||||
Sbjct: 165 cgtcgcggtggcggtccccg 184
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>gb|AF073526.1|AF073526 Mus musculus tolloid-like-2 protein (Tll2) mRNA, complete cds
          Length = 4661

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 239  gcctctttgcagtcgtgtcc 258
            ||||||||||||||||||||
Sbjct: 2502 gcctctttgcagtcgtgtcc 2483
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>gb|AC139752.4| Mus musculus BAC clone RP24-258K1 from 12, complete sequence
          Length = 189312

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    caggaatgctggactcaagg 397
              ||||||||||||||||||||
Sbjct: 109016 caggaatgctggactcaagg 108997
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    ggagcccatgccatccgagc 217
              ||||||||||||||||||||
Sbjct: 756833 ggagcccatgccatccgagc 756814
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>dbj|AB028218.1| Papilio xuthus PxRh5 mRNA for UV opsin, partial cds
          Length = 1547

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  caacaccgccaacagctcgg 238
            ||||||||||||||||||||
Sbjct: 1166 caacaccgccaacagctcgg 1185


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,397,267
Number of Sequences: 3902068
Number of extensions: 3397267
Number of successful extensions: 103907
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103674
Number of HSP's gapped (non-prelim): 225
length of query: 570
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 547
effective length of database: 17,143,297,704
effective search space: 9377383844088
effective search space used: 9377383844088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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