ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baalo04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048O15, full insert sequence Length = 1127 Score = 295 bits (149), Expect = 8e-77 Identities = 224/249 (89%) Strand = Plus / Plus Query: 5 agcccgcagtgctgcgcgaacccaccgacgctcaaccccgccgccggcgagggcaaggtc 64 |||||||||||||||||||||||||||||||| ||||| |||| ||| ||||| ||||| Sbjct: 223 agcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggggaaggtg 282 Query: 65 gtcgacagcttcggcgggatcaaggcgtacgtcgccggcgcccaagagtccaaggccgcc 124 || || |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 283 gtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaaggccgcc 342 Query: 125 gtagttctcatctccgacgtcttcgggtttggagcgccgaatctgaggaagatagccgat 184 || || ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 343 gtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagatagccgac 402 Query: 185 aaagttgctgcgtctggatatttcgttgtggtgccagatttcttgcatggggatccatat 244 |||||||| |||||||||| || |||||||||||||||||||| ||||||||||| | Sbjct: 403 aaagttgcctcgtctggatactttgttgtggtgccagatttcttacatggggatccttta 462 Query: 245 gtacctgaa 253 ||||||||| Sbjct: 463 gtacctgaa 471 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 302 aaagcatttgaagaggcaaagcctgttatcgctgctctaaaggaacaaggagcgtctagt 361 ||||||||||||||||| || || |||| || ||||| ||||| |||||| ||||||| Sbjct: 520 aaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagt 579 Query: 362 gttggggctgcaggttattgttggggtgcaaaggtagtcgcagagttagcgaaagctaat 421 ||||||||| ||||||||| |||||||||||||| || | |||||||| ||||||| || Sbjct: 580 attggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagctcat 639 Query: 422 gagatccagacagccgttatgtcgcatccttcttttgttactgtcgatgatataaaagag 481 ||||||||| | || || |||| || || |||||||| ||||| |||||||| |||||| Sbjct: 640 gagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaaagag 699 Query: 482 gtgaaatgccccatcgctgtacttggagctgaaactgatgtgatgtccccacc 534 || |||||||| || ||| ||||||||||||||| |||| ||||||||||| Sbjct: 700 gtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccacc 752
>dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N15, full insert sequence Length = 1127 Score = 295 bits (149), Expect = 8e-77 Identities = 224/249 (89%) Strand = Plus / Plus Query: 5 agcccgcagtgctgcgcgaacccaccgacgctcaaccccgccgccggcgagggcaaggtc 64 |||||||||||||||||||||||||||||||| ||||| |||| ||| ||||| ||||| Sbjct: 223 agcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggggaaggtg 282 Query: 65 gtcgacagcttcggcgggatcaaggcgtacgtcgccggcgcccaagagtccaaggccgcc 124 || || |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 283 gtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaaggccgcc 342 Query: 125 gtagttctcatctccgacgtcttcgggtttggagcgccgaatctgaggaagatagccgat 184 || || ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 343 gtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagatagccgac 402 Query: 185 aaagttgctgcgtctggatatttcgttgtggtgccagatttcttgcatggggatccatat 244 |||||||| |||||||||| || |||||||||||||||||||| ||||||||||| | Sbjct: 403 aaagttgcctcgtctggatactttgttgtggtgccagatttcttacatggggatccttta 462 Query: 245 gtacctgaa 253 ||||||||| Sbjct: 463 gtacctgaa 471 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 302 aaagcatttgaagaggcaaagcctgttatcgctgctctaaaggaacaaggagcgtctagt 361 ||||||||||||||||| || || |||| || ||||| ||||| |||||| ||||||| Sbjct: 520 aaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagt 579 Query: 362 gttggggctgcaggttattgttggggtgcaaaggtagtcgcagagttagcgaaagctaat 421 ||||||||| ||||||||| |||||||||||||| || | |||||||| ||||||| || Sbjct: 580 attggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagctcat 639 Query: 422 gagatccagacagccgttatgtcgcatccttcttttgttactgtcgatgatataaaagag 481 ||||||||| | || || |||| || || |||||||| ||||| |||||||| |||||| Sbjct: 640 gagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaaagag 699 Query: 482 gtgaaatgccccatcgctgtacttggagctgaaactgatgtgatgtccccacc 534 || |||||||| || ||| ||||||||||||||| |||| ||||||||||| Sbjct: 700 gtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccacc 752
>dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A04, full insert sequence Length = 1014 Score = 295 bits (149), Expect = 8e-77 Identities = 224/249 (89%) Strand = Plus / Plus Query: 5 agcccgcagtgctgcgcgaacccaccgacgctcaaccccgccgccggcgagggcaaggtc 64 |||||||||||||||||||||||||||||||| ||||| |||| ||| ||||| ||||| Sbjct: 39 agcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggggaaggtg 98 Query: 65 gtcgacagcttcggcgggatcaaggcgtacgtcgccggcgcccaagagtccaaggccgcc 124 || || |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 99 gtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaaggccgcc 158 Query: 125 gtagttctcatctccgacgtcttcgggtttggagcgccgaatctgaggaagatagccgat 184 || || ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 159 gtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagatagccgac 218 Query: 185 aaagttgctgcgtctggatatttcgttgtggtgccagatttcttgcatggggatccatat 244 |||||||| |||||||||| || |||||||||||||||||||| ||||||||||| | Sbjct: 219 aaagttgcctcgtctggatactttgttgtggtgccagatttcttacatggggatccttta 278 Query: 245 gtacctgaa 253 ||||||||| Sbjct: 279 gtacctgaa 287 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 302 aaagcatttgaagaggcaaagcctgttatcgctgctctaaaggaacaaggagcgtctagt 361 ||||||||||||||||| || || |||| || ||||| ||||| |||||| ||||||| Sbjct: 336 aaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagt 395 Query: 362 gttggggctgcaggttattgttggggtgcaaaggtagtcgcagagttagcgaaagctaat 421 ||||||||| ||||||||| |||||||||||||| || | |||||||| ||||||| || Sbjct: 396 attggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagctcat 455 Query: 422 gagatccagacagccgttatgtcgcatccttcttttgttactgtcgatgatataaaagag 481 ||||||||| | || || |||| || || |||||||| ||||| |||||||| |||||| Sbjct: 456 gagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaaagag 515 Query: 482 gtgaaatgccccatcgctgtacttggagctgaaactgatgtgatgtccccacc 534 || |||||||| || ||| ||||||||||||||| |||| ||||||||||| Sbjct: 516 gtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccacc 568
>gb|AY104092.1| Zea mays PCO081688 mRNA sequence Length = 1359 Score = 248 bits (125), Expect = 2e-62 Identities = 427/527 (81%), Gaps = 3/527 (0%) Strand = Plus / Plus Query: 11 cagtgctgcgcgaacccaccgacgctcaaccccgccgccggcgagggcaaggtcgtcgac 70 |||||||||| ||||| ||| | || ||||| ||| ||| |||||||||||||||||| Sbjct: 330 cagtgctgcgataacccgccggccctgaacccggcctgcggggagggcaaggtcgtcgac 389 Query: 71 agcttcggcgggatcaaggcgtacgtcgccggcgcccaagagtccaaggccgccgtagtt 130 |||||||||||| ||||||| |||||||||||| || | || |||||||||||||| || Sbjct: 390 agcttcggcgggctcaaggcctacgtcgccggccccgaggactccaaggccgccgtcgtc 449 Query: 131 ctcatctccgacgtcttcgggtttggagcgccgaatctgaggaagatagccgataaagtt 190 ||| | ||||||||||||| || | |||||||| ||||||||| |||||||| |||||| Sbjct: 450 ctcgttgccgacgtcttcggattcgaagcgccgattctgaggaacatagccgacaaagtt 509 Query: 191 gctgcgtctggatatttcgttgtggtgccagatttcttgcatggggatccatatgtacct 250 ||| |||| || || || |||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 510 gcttcgtcagggtactttgttgtggtaccagatttctttcatggggatccttatgtacct 569 Query: 251 gaagacgctgacagaccaatagcagtgtggatcaaggagcataccgcgggaaaagcattt 310 || | ||||| | | ||| | |||||| | ||| ||||| ||| ||||| ||| Sbjct: 570 gagaatgctgagaagctcatacctgtgtggctgaagtcacatactccggaaaaagggttt 629 Query: 311 gaagaggcaaagcctgttatcgctgctctaaaggaacaaggagcgtctagtgttggggct 370 ||||||||||| || ||||| || ||||||||||| | |||| |||| ||||| ||| Sbjct: 630 gaagaggcaaaaccagttattgcggctctaaaggagaagggagtgtctgccgttggagct 689 Query: 371 gcaggttattgttggggtgcaaaggtagtcgcagagttagcgaaagctaatgagatcc-- 428 ||||| ||||| |||||||||||||| || | ||||| || ||||| |||||| ||| Sbjct: 690 gcagggtattgctggggtgcaaaggtcgttgtggagttggcaaaagcaaatgagctcctc 749 Query: 429 -agacagccgttatgtcgcatccttcttttgttactgtcgatgatataaaagaggtgaaa 487 || | || || ||| ||| |||||||||||||| ||| | ||||| |||||||| ||| Sbjct: 750 aaggctgctgtactgttgcacccttcttttgttaccgtctacgatatcaaagaggtcaaa 809 Query: 488 tgccccatcgctgtacttggagctgaaactgatgtgatgtccccacc 534 ||| | ||| || ||||||||||||| | ||||||| ||||||||| Sbjct: 810 tgctcaatctctatacttggagctgagatggatgtgaggtccccacc 856
>gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence Length = 1139 Score = 220 bits (111), Expect = 4e-54 Identities = 285/343 (83%) Strand = Plus / Plus Query: 54 agggcaaggtcgtcgacagcttcggcgggatcaaggcgtacgtcgccggcgcccaagagt 113 ||||||||||||||||||||||||||||| ||||||| |||||||||||| || | || | Sbjct: 254 agggcaaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggact 313 Query: 114 ccaaggccgccgtagttctcatctccgacgtcttcgggtttggagcgccgaatctgagga 173 ||||||||||||| || ||| | ||||||||||||| || | |||||||| |||||||| Sbjct: 314 ccaaggccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattctgagga 373 Query: 174 agatagccgataaagttgctgcgtctggatatttcgttgtggtgccagatttcttgcatg 233 | |||||||| ||||||||| |||| || || || |||||||| ||||||||||| |||| Sbjct: 374 acatagccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcatg 433 Query: 234 gggatccatatgtacctgaagacgctgacagaccaatagcagtgtggatcaaggagcata 293 ||||||| ||||||||||| | ||||| | | ||| | |||||| | ||| |||| Sbjct: 434 gggatccttatgtacctgagaatgctgagaagctcatacctgtgtggctgaagtcacata 493 Query: 294 ccgcgggaaaagcatttgaagaggcaaagcctgttatcgctgctctaaaggaacaaggag 353 | ||| ||||| |||||||||||||| || |||||||| ||||||||||| | |||| Sbjct: 494 ctccggaaaaagggtttgaagaggcaaaaccagttatcgcggctctaaaggagaagggag 553 Query: 354 cgtctagtgttggggctgcaggttattgttggggtgcaaaggt 396 |||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 554 tgtctgccgttggagctgcagggtattgctggggtgcaaaggt 596 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 478 agaggtgaaatgccccatcgctgtacttggagctgaaactgatgtgatgtccccacc 534 |||||| |||||| | ||| || ||||||||||||| | ||||||| ||||||||| Sbjct: 669 agaggtcaaatgctcaatctctatacttggagctgagatggatgtgaggtccccacc 725
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 178 bits (90), Expect = 1e-41 Identities = 132/146 (90%) Strand = Plus / Plus Query: 5 agcccgcagtgctgcgcgaacccaccgacgctcaaccccgccgccggcgagggcaaggtc 64 |||||||||||||||||||||||||||||||| ||||| |||| ||| ||||| ||||| Sbjct: 69634 agcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggggaaggtg 69693 Query: 65 gtcgacagcttcggcgggatcaaggcgtacgtcgccggcgcccaagagtccaaggccgcc 124 || || |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 69694 gtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaaggccgcc 69753 Query: 125 gtagttctcatctccgacgtcttcgg 150 || || ||||||||||| |||||||| Sbjct: 69754 gtcgtcctcatctccgatgtcttcgg 69779 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 170 aggaagatagccgataaagttgctgcgtctggatatttcgttgtggtgccagatttcttg 229 |||||||||||||| |||||||| |||||||||| || |||||||||||||||||||| Sbjct: 70861 aggaagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttctta 70920 Query: 230 catggggatccatatgtacctgaa 253 ||||||||||| | ||||||||| Sbjct: 70921 catggggatcctttagtacctgaa 70944 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 302 aaagcatttgaagaggcaaagcctgttatcgctgctctaaaggaacaaggagcgtctagt 361 ||||||||||||||||| || || |||| || ||||| ||||| |||||| ||||||| Sbjct: 71892 aaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagt 71951 Query: 362 gttggggctgcaggttattgttggggtg 389 ||||||||| ||||||||| ||||||| Sbjct: 71952 attggggctgtaggttattgctggggtg 71979 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 305 gcatttgaagaggcaaagcctgttatcgctgctctaaaggaacaaggagcgtctagtgtt 364 ||||||||||||||||| || ||||| || ||||||||||| | ||||| ||| | Sbjct: 77239 gcatttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatc 77298 Query: 365 ggggctgcaggttattgttggggtg 389 ||||||||||||||||||||||||| Sbjct: 77299 ggggctgcaggttattgttggggtg 77323 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 170 aggaagatagccgataaagttgctgcgtctggatatttcgttgtggtgccagatttcttg 229 ||||||||||| || || |||||| || ||| || ||||||||||||||||||||| | Sbjct: 76416 aggaagatagcagacaaggttgctttgtttggttacttcgttgtggtgccagatttcctt 76475 Query: 230 catggggatccata 243 |||||||| ||||| Sbjct: 76476 catggggacccata 76489 Score = 54.0 bits (27), Expect = 5e-04 Identities = 108/135 (80%) Strand = Plus / Plus Query: 9 cgcagtgctgcgcgaacccaccgacgctcaaccccgccgccggcgagggcaaggtcgtcg 68 |||||||||| | |||||| ||| |||| |||| |||| ||| | |||| ||||||||| Sbjct: 75446 cgcagtgctgggagaacccgccggcgctggacccggccggcggagggggcgaggtcgtcg 75505 Query: 69 acagcttcggcgggatcaaggcgtacgtcgccggcgcccaagagtccaaggccgccgtag 128 | |||||||||| |||||||||||||| ||| | | |||||||||||||| | Sbjct: 75506 gcgacttcggcgggcagaaggcgtacgtcgctggctcggccggctccaaggccgccgtcg 75565 Query: 129 ttctcatctccgacg 143 | ||||||||||||| Sbjct: 75566 tcctcatctccgacg 75580 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 389 gcaaaggtagtcgcagagttagcgaaagctaatgagatccagacagccgttatgtcgcat 448 |||||||| || | |||||||| ||||||| ||||||||||| | || || |||| || Sbjct: 72082 gcaaaggtggtggtagagttagtgaaagctcatgagatccaggctgctgtgatgtgtcac 72141 Query: 449 ccttcttttgttactgtcgatgatataaaag 479 || |||||||| ||||| |||||||| |||| Sbjct: 72142 ccctcttttgtgactgttgatgatatgaaag 72172 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 478 agaggtgaaatgccccatcgctgtacttggagctgaaactgatgtgatgtccccacc 534 |||||| |||||||| || ||| ||||||||||||||| |||| ||||||||||| Sbjct: 72267 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccacc 72323
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 178 bits (90), Expect = 1e-41 Identities = 132/146 (90%) Strand = Plus / Plus Query: 5 agcccgcagtgctgcgcgaacccaccgacgctcaaccccgccgccggcgagggcaaggtc 64 |||||||||||||||||||||||||||||||| ||||| |||| ||| ||||| ||||| Sbjct: 19265559 agcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggaggggaaggtg 19265618 Query: 65 gtcgacagcttcggcgggatcaaggcgtacgtcgccggcgcccaagagtccaaggccgcc 124 || || |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 19265619 gtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaaggccgcc 19265678 Query: 125 gtagttctcatctccgacgtcttcgg 150 || || ||||||||||| |||||||| Sbjct: 19265679 gtcgtcctcatctccgatgtcttcgg 19265704 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 170 aggaagatagccgataaagttgctgcgtctggatatttcgttgtggtgccagatttcttg 229 |||||||||||||| |||||||| |||||||||| || |||||||||||||||||||| Sbjct: 19266786 aggaagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttctta 19266845 Query: 230 catggggatccatatgtacctgaa 253 ||||||||||| | ||||||||| Sbjct: 19266846 catggggatcctttagtacctgaa 19266869 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 302 aaagcatttgaagaggcaaagcctgttatcgctgctctaaaggaacaaggagcgtctagt 361 ||||||||||||||||| || || |||| || ||||| ||||| |||||| ||||||| Sbjct: 19267817 aaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagt 19267876 Query: 362 gttggggctgcaggttattgttggggtg 389 ||||||||| ||||||||| ||||||| Sbjct: 19267877 attggggctgtaggttattgctggggtg 19267904 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 305 gcatttgaagaggcaaagcctgttatcgctgctctaaaggaacaaggagcgtctagtgtt 364 ||||||||||||||||| || ||||| || ||||||||||| | ||||| ||| | Sbjct: 19273164 gcatttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatc 19273223 Query: 365 ggggctgcaggttattgttggggtg 389 ||||||||||||||||||||||||| Sbjct: 19273224 ggggctgcaggttattgttggggtg 19273248 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 170 aggaagatagccgataaagttgctgcgtctggatatttcgttgtggtgccagatttcttg 229 ||||||||||| || || |||||| || ||| || ||||||||||||||||||||| | Sbjct: 19272341 aggaagatagcagacaaggttgctttgtttggttacttcgttgtggtgccagatttcctt 19272400 Query: 230 catggggatccata 243 |||||||| ||||| Sbjct: 19272401 catggggacccata 19272414 Score = 54.0 bits (27), Expect = 5e-04 Identities = 108/135 (80%) Strand = Plus / Plus Query: 9 cgcagtgctgcgcgaacccaccgacgctcaaccccgccgccggcgagggcaaggtcgtcg 68 |||||||||| | |||||| ||| |||| |||| |||| ||| | |||| ||||||||| Sbjct: 19271371 cgcagtgctgggagaacccgccggcgctggacccggccggcggagggggcgaggtcgtcg 19271430 Query: 69 acagcttcggcgggatcaaggcgtacgtcgccggcgcccaagagtccaaggccgccgtag 128 | |||||||||| |||||||||||||| ||| | | |||||||||||||| | Sbjct: 19271431 gcgacttcggcgggcagaaggcgtacgtcgctggctcggccggctccaaggccgccgtcg 19271490 Query: 129 ttctcatctccgacg 143 | ||||||||||||| Sbjct: 19271491 tcctcatctccgacg 19271505 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 389 gcaaaggtagtcgcagagttagcgaaagctaatgagatccagacagccgttatgtcgcat 448 |||||||| || | |||||||| ||||||| ||||||||||| | || || |||| || Sbjct: 19268007 gcaaaggtggtggtagagttagtgaaagctcatgagatccaggctgctgtgatgtgtcac 19268066 Query: 449 ccttcttttgttactgtcgatgatataaaag 479 || |||||||| ||||| |||||||| |||| Sbjct: 19268067 ccctcttttgtgactgttgatgatatgaaag 19268097 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 478 agaggtgaaatgccccatcgctgtacttggagctgaaactgatgtgatgtccccacc 534 |||||| |||||||| || ||| ||||||||||||||| |||| ||||||||||| Sbjct: 19268192 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccacc 19268248 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cgctcaaccccgccgccggc 52 |||||||||||||||||||| Sbjct: 22304645 cgctcaaccccgccgccggc 22304664
>dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044O16, full insert sequence Length = 1039 Score = 109 bits (55), Expect = 9e-21 Identities = 190/235 (80%) Strand = Plus / Plus Query: 9 cgcagtgctgcgcgaacccaccgacgctcaaccccgccgccggcgagggcaaggtcgtcg 68 |||||||||| | |||||| ||| |||| |||| |||| ||| | |||| ||||||||| Sbjct: 57 cgcagtgctgggagaacccgccggcgctggacccggccggcggagggggcgaggtcgtcg 116 Query: 69 acagcttcggcgggatcaaggcgtacgtcgccggcgcccaagagtccaaggccgccgtag 128 | |||||||||| |||||||||||||| ||| | | |||||||||||||| | Sbjct: 117 gcgacttcggcgggcagaaggcgtacgtcgctggctcggccggctccaaggccgccgtcg 176 Query: 129 ttctcatctccgacgtcttcgggtttggagcgccgaatctgaggaagatagccgataaag 188 | ||||||||||||| ||| || |||| ||| || || |||||||||||||| || || | Sbjct: 177 tcctcatctccgacgcctttggctttgaagccccaaacctgaggaagatagcagacaagg 236 Query: 189 ttgctgcgtctggatatttcgttgtggtgccagatttcttgcatggggatccata 243 ||||| || ||| || ||||||||||||||||||||| | |||||||| ||||| Sbjct: 237 ttgctttgtttggttacttcgttgtggtgccagatttccttcatggggacccata 291 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 305 gcatttgaagaggcaaagcctgttatcgctgctctaaaggaacaaggagcgtctagtgtt 364 ||||||||||||||||| || ||||| || ||||||||||| | ||||| ||| | Sbjct: 350 gcatttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatc 409 Query: 365 ggggctgcaggttattgttggggtgcaaaggtagt 399 ||||||||||||||||||||||||||||||||||| Sbjct: 410 ggggctgcaggttattgttggggtgcaaaggtagt 444
>gb|U58749.1| Caenorhabditis elegans cosmid B0496, complete sequence Length = 40466 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 298 gggaaaagcatttgaagaggcaa 320 ||||||||||||||||||||||| Sbjct: 8043 gggaaaagcatttgaagaggcaa 8021
>ref|XM_507574.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.39 mRNA Length = 1024 Score = 44.1 bits (22), Expect = 0.46 Identities = 52/62 (83%) Strand = Plus / Plus Query: 167 ctgaggaagatagccgataaagttgctgcgtctggatatttcgttgtggtgccagatttc 226 |||||||| ||||| || ||||||| || | ||||||| ||| ||||||||||||||| Sbjct: 268 ctgaggaaaatagctgacaaagttggtgaagcgggatattacgtcgtggtgccagatttc 327 Query: 227 tt 228 || Sbjct: 328 tt 329
>ref|XM_480878.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1024 Score = 44.1 bits (22), Expect = 0.46 Identities = 52/62 (83%) Strand = Plus / Plus Query: 167 ctgaggaagatagccgataaagttgctgcgtctggatatttcgttgtggtgccagatttc 226 |||||||| ||||| || ||||||| || | ||||||| ||| ||||||||||||||| Sbjct: 268 ctgaggaaaatagctgacaaagttggtgaagcgggatattacgtcgtggtgccagatttc 327 Query: 227 tt 228 || Sbjct: 328 tt 329
>ref|XM_507174.2| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.39 mRNA Length = 1032 Score = 44.1 bits (22), Expect = 0.46 Identities = 52/62 (83%) Strand = Plus / Plus Query: 167 ctgaggaagatagccgataaagttgctgcgtctggatatttcgttgtggtgccagatttc 226 |||||||| ||||| || ||||||| || | ||||||| ||| ||||||||||||||| Sbjct: 268 ctgaggaaaatagctgacaaagttggtgaagcgggatattacgtcgtggtgccagatttc 327 Query: 227 tt 228 || Sbjct: 328 tt 329
>ref|XM_507173.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.39 mRNA Length = 1062 Score = 44.1 bits (22), Expect = 0.46 Identities = 52/62 (83%) Strand = Plus / Plus Query: 167 ctgaggaagatagccgataaagttgctgcgtctggatatttcgttgtggtgccagatttc 226 |||||||| ||||| || ||||||| || | ||||||| ||| ||||||||||||||| Sbjct: 306 ctgaggaaaatagctgacaaagttggtgaagcgggatattacgtcgtggtgccagatttc 365 Query: 227 tt 228 || Sbjct: 366 tt 367
>ref|XM_463198.1| Oryza sativa (japonica cultivar-group), mRNA Length = 948 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 37 caaccccgccgccggcgagggcaagg 62 |||| ||||||||||||||||||||| Sbjct: 495 caacgccgccgccggcgagggcaagg 520
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 37 caaccccgccgccggcgagggcaagg 62 |||| ||||||||||||||||||||| Sbjct: 23362838 caacgccgccgccggcgagggcaagg 23362813
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 37 caaccccgccgccggcgagggcaagg 62 |||| ||||||||||||||||||||| Sbjct: 23355866 caacgccgccgccggcgagggcaagg 23355841
>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence Length = 129647 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 37 caaccccgccgccggcgagggcaagg 62 |||| ||||||||||||||||||||| Sbjct: 45494 caacgccgccgccggcgagggcaagg 45469
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 cgccgccggcgagggcaaggtc 64 |||||||||||||||||||||| Sbjct: 1338765 cgccgccggcgagggcaaggtc 1338786
>dbj|AK104922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-D02, full insert sequence Length = 1024 Score = 44.1 bits (22), Expect = 0.46 Identities = 52/62 (83%) Strand = Plus / Plus Query: 167 ctgaggaagatagccgataaagttgctgcgtctggatatttcgttgtggtgccagatttc 226 |||||||| ||||| || ||||||| || | ||||||| ||| ||||||||||||||| Sbjct: 268 ctgaggaaaatagctgacaaagttggtgaagcgggatattacgtcgtggtgccagatttc 327 Query: 227 tt 228 || Sbjct: 328 tt 329
>dbj|AK104657.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D03, full insert sequence Length = 1036 Score = 44.1 bits (22), Expect = 0.46 Identities = 52/62 (83%) Strand = Plus / Plus Query: 167 ctgaggaagatagccgataaagttgctgcgtctggatatttcgttgtggtgccagatttc 226 |||||||| ||||| || ||||||| || | ||||||| ||| ||||||||||||||| Sbjct: 280 ctgaggaaaatagctgacaaagttggtgaagcgggatattacgtcgtggtgccagatttc 339 Query: 227 tt 228 || Sbjct: 340 tt 341
>dbj|AK067264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096H10, full insert sequence Length = 1062 Score = 44.1 bits (22), Expect = 0.46 Identities = 52/62 (83%) Strand = Plus / Plus Query: 167 ctgaggaagatagccgataaagttgctgcgtctggatatttcgttgtggtgccagatttc 226 |||||||| ||||| || ||||||| || | ||||||| ||| ||||||||||||||| Sbjct: 306 ctgaggaaaatagctgacaaagttggtgaagcgggatattacgtcgtggtgccagatttc 365 Query: 227 tt 228 || Sbjct: 366 tt 367
>dbj|AK059739.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-F02, full insert sequence Length = 1044 Score = 44.1 bits (22), Expect = 0.46 Identities = 52/62 (83%) Strand = Plus / Plus Query: 167 ctgaggaagatagccgataaagttgctgcgtctggatatttcgttgtggtgccagatttc 226 |||||||| ||||| || ||||||| || | ||||||| ||| ||||||||||||||| Sbjct: 280 ctgaggaaaatagctgacaaagttggtgaagcgggatattacgtcgtggtgccagatttc 339 Query: 227 tt 228 || Sbjct: 340 tt 341
>dbj|AB083132.1| Corynebacterium efficiens lysA gene for diaminopimelate decarboxylase, complete cds Length = 1704 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 cgccgccggcgagggcaaggtc 64 |||||||||||||||||||||| Sbjct: 761 cgccgccggcgagggcaaggtc 782
>gb|AE010375.1| Methanopyrus kandleri AV19 section 74 of 157 of the complete genome Length = 10326 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 118 ggccgccgtagttctcatctccgac 142 ||||||||||||||| ||||||||| Sbjct: 4675 ggccgccgtagttctgatctccgac 4651
>gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0061D06, complete sequence Length = 172126 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 200 ggatatttcgttgtggtgccagatttctt 228 ||||||| ||| ||||||||||||||||| Sbjct: 72939 ggatattacgtcgtggtgccagatttctt 72911
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 gccgccggcgagggcaaggtcgtcg 68 |||| |||||||||||||||||||| Sbjct: 413848 gccggcggcgagggcaaggtcgtcg 413824
>gb|AC126695.4| Mus musculus BAC clone RP23-313D2 from 18, complete sequence Length = 171427 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 gaagaggcaaagcctgttatc 331 ||||||||||||||||||||| Sbjct: 101212 gaagaggcaaagcctgttatc 101192
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 200 ggatatttcgttgtggtgccagatttctt 228 ||||||| ||| ||||||||||||||||| Sbjct: 9676738 ggatattacgtcgtggtgccagatttctt 9676766
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 200 ggatatttcgttgtggtgccagatttctt 228 ||||||| ||| ||||||||||||||||| Sbjct: 8390082 ggatattacgtcgtggtgccagatttctt 8390110
>gb|AC106772.3| Homo sapiens chromosome 5 clone RP11-310P5, complete sequence Length = 161984 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 aaaagcatttgaagaggcaaa 321 ||||||||||||||||||||| Sbjct: 43893 aaaagcatttgaagaggcaaa 43913
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 200 ggatatttcgttgtggtgccagatttctt 228 ||||||| ||| ||||||||||||||||| Sbjct: 5799 ggatattacgtcgtggtgccagatttctt 5827
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 200 ggatatttcgttgtggtgccagatttctt 228 ||||||| ||| ||||||||||||||||| Sbjct: 130191 ggatattacgtcgtggtgccagatttctt 130219
>emb|AJ718167.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT32-200, cultivar Bright Yellow 2 Length = 153 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 tgaggaagatagccgataaagttgc 192 ||||||||||||| ||||||||||| Sbjct: 47 tgaggaagatagcagataaagttgc 71
>ref|NM_213954.1| Sus scrofa heart aconitase (ACO2), mRNA Length = 2665 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 cgccgtagttctcatctccga 141 ||||||||||||||||||||| Sbjct: 2028 cgccgtagttctcatctccga 2008
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 200 ggatatttcgttgtggtgccagatttctt 228 ||||||| ||| ||||||||||||||||| Sbjct: 9748435 ggatattacgtcgtggtgccagatttctt 9748463
>gb|J05224.1|PIGACON Pig heart aconitase mRNA, complete cds Length = 2665 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 cgccgtagttctcatctccga 141 ||||||||||||||||||||| Sbjct: 2028 cgccgtagttctcatctccga 2008
>ref|NM_120737.1| Arabidopsis thaliana unknown protein AT5G06540 mRNA, complete cds Length = 1869 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 tctcatctccgacgtcttcg 149 |||||||||||||||||||| Sbjct: 117 tctcatctccgacgtcttcg 136
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cgctcaaccccgccgccggc 52 |||||||||||||||||||| Sbjct: 6280 cgctcaaccccgccgccggc 6299
>gb|AC134869.4| Mus musculus BAC clone RP23-137C6 from chromosome 13, complete sequence Length = 213473 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 ctagtgttggggctgcaggt 376 |||||||||||||||||||| Sbjct: 195450 ctagtgttggggctgcaggt 195431
>gb|AC125350.3| Mus musculus BAC clone RP23-423B11 from chromosome 13, complete sequence Length = 205567 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 ctagtgttggggctgcaggt 376 |||||||||||||||||||| Sbjct: 199905 ctagtgttggggctgcaggt 199924
>gb|DQ446922.1| Arabidopsis thaliana clone pENTR221-At5g06540 pentatricopeptide repeat-containing protein (At5g06540) mRNA, complete cds Length = 797 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 tctcatctccgacgtcttcg 149 |||||||||||||||||||| Sbjct: 117 tctcatctccgacgtcttcg 136
>emb|AL603755.4| Human DNA sequence from clone RP11-136G2 on chromosome 6, complete sequence Length = 167565 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 agtgttggggctgcaggtta 378 |||||||||||||||||||| Sbjct: 98582 agtgttggggctgcaggtta 98601
>emb|AL356672.9| Human DNA sequence from clone RP11-452D24 on chromosome 6, complete sequence Length = 166517 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 agtgttggggctgcaggtta 378 |||||||||||||||||||| Sbjct: 109116 agtgttggggctgcaggtta 109097
>emb|AL009183.10|HS892F13 Human DNA sequence from clone RP5-892F13 on chromosome 1p36.2-36.3 Contains the TNFRSF9 gene for tumor necrosis factor receptor superfamily member 9, complete sequence Length = 65848 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 tatgtcgcatccttcttttg 458 |||||||||||||||||||| Sbjct: 12498 tatgtcgcatccttcttttg 12517
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 440 atgtcgcatccttcttttgttact 463 |||||||||||||| ||||||||| Sbjct: 387566 atgtcgcatccttcatttgttact 387543
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 ccgccgccggcgagggcaaggtcg 65 ||||||||| |||||||||||||| Sbjct: 47642 ccgccgccgccgagggcaaggtcg 47665
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 ccggcgagggcaaggtcgtcgaca 71 ||||||||||| |||||||||||| Sbjct: 81711 ccggcgagggccaggtcgtcgaca 81734
>gb|AC090639.6| Homo sapiens chromosome 11, clone RP11-1114G3, complete sequence Length = 139604 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 gatgatataaaagaggtgaa 486 |||||||||||||||||||| Sbjct: 68182 gatgatataaaagaggtgaa 68201
>dbj|AK138648.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330093B16 product:unclassifiable, full insert sequence Length = 2519 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 ctagtgttggggctgcaggt 376 |||||||||||||||||||| Sbjct: 2290 ctagtgttggggctgcaggt 2309
>dbj|AK161804.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030445B21 product:HESB like domain containing 2, full insert sequence Length = 2553 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 ctagtgttggggctgcaggt 376 |||||||||||||||||||| Sbjct: 1670 ctagtgttggggctgcaggt 1689
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 cgccgccggcgagggcaaggtcgtcgac 70 |||||||||||||||||| | ||||||| Sbjct: 20415862 cgccgccggcgagggcaacgacgtcgac 20415889
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 ccgccgccggcgagggcaaggtcg 65 ||||||||| |||||||||||||| Sbjct: 4089970 ccgccgccgccgagggcaaggtcg 4089947
>gb|AY130970.1| Mycobacterium avium strain A5 glycopeptidolipid biosynthesis gene cluster, partial sequence Length = 27516 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 ccgccgccggcgagggcaaggtcg 65 ||||||||| |||||||||||||| Sbjct: 16566 ccgccgccgccgagggcaaggtcg 16543
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 tgtcgatgatataaaagagg 482 |||||||||||||||||||| Sbjct: 577256 tgtcgatgatataaaagagg 577275
>dbj|AP002543.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F15M7 Length = 74350 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tctcatctccgacgtcttcg 149 |||||||||||||||||||| Sbjct: 25536 tctcatctccgacgtcttcg 25517
>dbj|AK110966.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-B06, full insert sequence Length = 2040 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cgctcaaccccgccgccggc 52 |||||||||||||||||||| Sbjct: 1664 cgctcaaccccgccgccggc 1683
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cgctcaaccccgccgccggc 52 |||||||||||||||||||| Sbjct: 2409761 cgctcaaccccgccgccggc 2409780
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 ccgccgccggcgagggcaaggtcg 65 ||||||||| |||||||||||||| Sbjct: 4049940 ccgccgccgccgagggcaaggtcg 4049963
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 cgccgccggcgagggcaaggtcgtcgac 70 |||||||||||||||||| | ||||||| Sbjct: 20342076 cgccgccggcgagggcaacgacgtcgac 20342103
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 43 cgccgccggcgagggcaaggtcgtcgac 70 |||||||||||||||||| | ||||||| Sbjct: 95839 cgccgccggcgagggcaacgacgtcgac 95812
>emb|AL807807.11| Mouse DNA sequence from clone RP23-284L15 on chromosome 4, complete sequence Length = 171570 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tctagtgttggggctgcagg 375 |||||||||||||||||||| Sbjct: 35998 tctagtgttggggctgcagg 35979
>emb|AL732512.7| Mouse DNA sequence from clone RP23-21G12 on chromosome 4, complete sequence Length = 46643 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 tgccagatttcttgcatggg 235 |||||||||||||||||||| Sbjct: 41180 tgccagatttcttgcatggg 41161 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,797,424 Number of Sequences: 3902068 Number of extensions: 3797424 Number of successful extensions: 69559 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68772 Number of HSP's gapped (non-prelim): 785 length of query: 534 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 511 effective length of database: 17,143,297,704 effective search space: 8760225126744 effective search space used: 8760225126744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
