ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalo01 |
|---|---|
| Clone Library Name | barley_pub |
>5NTC_HUMAN (P49902) Cytosolic purine 5'-nucleotidase (EC 3.1.3.5)| (5'-nucleotidase cytosolic II) Length = 561 Score = 92.0 bits (227), Expect = 1e-18 Identities = 60/171 (35%), Positives = 90/171 (52%), Gaps = 10/171 (5%) Frame = +1 Query: 40 DEPDYALIDTLFSLGEAYLFAQLVDFMDSNPAKVPSGT---------DYALMYKDVRSAV 192 D + +++TLF+L E YL A LVDF + P T Y M++DVR AV Sbjct: 146 DTERFYILNTLFNLPETYLLACLVDFFTNCPRYTSCETGFKDGDLFMSYRSMFQDVRDAV 205 Query: 193 DLCHRDGTLKRMVAKEPSRYINEDLAIVPMLEMLRKSGRSTFLVTNSLWDYTDVVMNYLC 372 D H G+LK + +Y+ +D + +L +++ G+ FL TNS + YTD +M YL Sbjct: 206 DWVHYKGSLKEKTVENLEKYVVKDGKLPLLLSRMKEVGK-VFLATNSDYKYTDKIMTYLF 264 Query: 373 G-PYMSDVSSSHNRKWLEYFDVVITGSSKPSFFHDDNRAGLFEVEPDSGKL 522 P+ SSH R W YFD+++ + KP FF + L +V+ +GKL Sbjct: 265 DFPHGPKPGSSH-RPWQSYFDLILVDARKPLFFGEG--TVLRQVDTKTGKL 312
>PUNA_BACSU (P46354) Purine nucleoside phosphorylase 1 (EC 2.4.2.1) (Purine| nucleoside phosphorylase I) (PNP I) (PU-NPase I) (Inosine phosphorylase) Length = 271 Score = 31.6 bits (70), Expect = 1.8 Identities = 13/45 (28%), Positives = 24/45 (53%) Frame = +1 Query: 61 IDTLFSLGEAYLFAQLVDFMDSNPAKVPSGTDYALMYKDVRSAVD 195 ++T F G+ + ++FM +NP P+ D+ + D+ SA D Sbjct: 115 VNTEFRAGDLMIITDHINFMGTNPLIGPNEADFGARFPDMSSAYD 159
>CP2AC_MOUSE (P56593) Cytochrome P450 2A12 (EC 1.14.14.1) (CYPIIA12) (Steroid| hormones 7-alpha-hydroxylase) (Testosterone 7-alpha-hydroxylase) Length = 492 Score = 31.2 bits (69), Expect = 2.3 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 247 RYINEDLAIVPMLEMLRKSGRSTFLVTNSLWDYTDVVMNYLCGPYMSDVSSSH 405 R+ ED + +L+M+ + + T L+D VM YL GP + SH Sbjct: 189 RFNYEDKEFLSLLQMMGQVNKFAASPTGQLYDMFHSVMKYLPGPQQQIIKDSH 241
>FMT_NOCFA (Q5YTN5) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 307 Score = 30.8 bits (68), Expect = 3.0 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 8/97 (8%) Frame = +1 Query: 1 VAAYGSTLIRDSFDEPDYALIDTLFSLGEAYLFAQLV--------DFMDSNPAKVPSGTD 156 V AYG+ L + + D P + I+ FSL A+ A V + + ++ +G D Sbjct: 85 VVAYGALLPQAALDIPRHGWINLHFSLLPAWRGAAPVQAAINAGEEITGATTFQIEAGLD 144 Query: 157 YALMYKDVRSAVDLCHRDGTLKRMVAKEPSRYINEDL 267 +Y V +D+ GTL +A+ +R + L Sbjct: 145 SGPVYGVVTEKIDVTDTAGTLLERLAETGARLLETTL 181
>YMS2_MAIZE (P10579) Hypothetical 39 kDa protein in mitochondrial S-1 and S-2| DNA (URF 2) Length = 339 Score = 30.8 bits (68), Expect = 3.0 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -2 Query: 309 ASRFSKHFKHWYNC-QVFIDIPARFLCNHSF*SSITMTQINGRPHIFIH 166 + +F+K + +YN + ID+P NHSF S +T I H+ +H Sbjct: 200 SQKFTKQYGLYYNLVEWIIDLPIYDFHNHSFFPSTGITPIGEITHVILH 248
>SIEB_BPP22 (P38396) Superinfection exclusion protein B| Length = 192 Score = 30.0 bits (66), Expect = 5.2 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +2 Query: 119 WTAILQKYLQALTMRLCIKM*GLPLICVIVMEL-*NEWLQRNLAGISMKTWQLYQCLKCL 295 W +++ +LQ +T++ I M + ++ +IVM + EW+ + I W Y L C+ Sbjct: 6 WQELMRFFLQGMTLKQLIHMLIILIVLIIVMPVSVKEWINLHNPEILPHYWMYYILLFCV 65
>CP2H2_CHICK (P20678) Cytochrome P450 2H2 (EC 1.14.14.1) (CYPIIH2) (P450 PCHP7)| Length = 491 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/51 (25%), Positives = 29/51 (56%) Frame = +1 Query: 247 RYINEDLAIVPMLEMLRKSGRSTFLVTNSLWDYTDVVMNYLCGPYMSDVSS 399 R+ ED + ++EML ++ R + L+++ +++YL GP+ + + S Sbjct: 189 RFDYEDKKFLDLIEMLDENERYQNRIQTQLYNFFPTILDYLPGPHKTLIKS 239
>GUNG_CLOTM (Q05332) Endoglucanase G precursor (EC 3.2.1.4) (Egg)| (Endo-1,4-beta-glucanase) (Cellulase G) Length = 566 Score = 29.3 bits (64), Expect = 8.8 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%) Frame = +1 Query: 76 SLGEAYLFAQLVD---FMDSNPAKVPSGTDYALMYKDVRSAVDLCHRD-GTLKRMVAKEP 243 SLGE Y Q D + P K + + + +Y D+ S ++ D G LKR++ K P Sbjct: 467 SLGEYYGTPQASDPPATPTATPTKPAASSTPSFIYGDINSDGNVNSTDLGILKRIIVKNP 526 Query: 244 SRYINEDLAIV 276 N D A V Sbjct: 527 PASANMDAADV 537
>DEXT_PENMI (P48845) Dextranase precursor (EC 3.2.1.11)| (Alpha-1,6-glucan-6-glucanohydrolase) Length = 608 Score = 29.3 bits (64), Expect = 8.8 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = -3 Query: 362 FMTTSV*SHKLFVTKNVERPDFLSISSIGT 273 F T + ++K FV KNV PD L +SIGT Sbjct: 526 FRITPLQNYKNFVVKNVAFPDGLQTNSIGT 555
>UBP29_MOUSE (Q9ES63) Ubiquitin carboxyl-terminal hydrolase 29 (EC 3.1.2.15)| (Ubiquitin thioesterase 29) (Ubiquitin-specific-processing protease 29) (Deubiquitinating enzyme 29) Length = 869 Score = 29.3 bits (64), Expect = 8.8 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 373 GPYMSDVSSSHNRKWLEYFDVVITGSSKPS 462 G Y+SDV + WL Y DV + SS PS Sbjct: 780 GHYVSDVYDFQKQAWLLYSDVQVFESSDPS 809
>TKR_DROME (P14083) Protein TKR (dTKR)| Length = 1046 Score = 29.3 bits (64), Expect = 8.8 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +1 Query: 457 PSFFHDDNRAGLFEVEPDSGKLLNADLQIGSPRSSQHQPKPIHK 588 P F D+ GLF D GKL N +++ PR P P K Sbjct: 726 PHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLK 769 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,882,756 Number of Sequences: 219361 Number of extensions: 1706980 Number of successful extensions: 3944 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3862 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3940 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
