ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baaln24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR356245.25| Zebrafish DNA sequence from clone CH211-257I15 ... 44 0.53
2emb|AL133413.5| Human DNA sequence from clone RP11-54K22 on chro... 44 0.53
3emb|AL008732.1|HS67M12 Human DNA sequence from clone RP1-67M12 o... 44 0.53
4gb|AC099509.2| Homo sapiens chromosome 5 clone RP11-254I22, comp... 44 0.53
5emb|CT005239.3| Pan troglodytes chromosome X clone PTB-125H24 ma... 42 2.1
6gb|AC121982.3| Mus musculus BAC clone RP24-291D6 from chromosome... 42 2.1
7gb|AC182640.3| Pan troglodytes BAC clone CH251-352K16 from chrom... 42 2.1
8emb|AL109854.10|HSJ834A16 Human DNA sequence from clone RP5-834A... 42 2.1
9emb|BX296544.8| Zebrafish DNA sequence from clone DKEYP-14B8 in ... 42 2.1
10emb|BX470182.12| Zebrafish DNA sequence from clone CH211-195P4 i... 42 2.1
11emb|AL929077.19| Zebrafish DNA sequence from clone CH211-129K19 ... 42 2.1
12gb|AC093677.4| Homo sapiens BAC clone RP11-629B11 from 4, comple... 42 2.1
13gb|AC093789.3| Homo sapiens BAC clone RP11-219G10 from 4, comple... 42 2.1
14gb|AC148313.3| Pan troglodytes BAC clone CH251-565C10 from chrom... 42 2.1
15gb|AC110763.4| Homo sapiens BAC clone RP11-57E2 from 4, complete... 42 2.1
16gb|AC016736.6| Homo sapiens BAC clone RP11-393J17 from 2, comple... 42 2.1
17emb|AL844187.13| Zebrafish DNA sequence from clone DKEY-221D18 i... 42 2.1
18gb|AC006600.4|AC006600 Homo sapiens chromosome 17, clone hRPK.50... 42 2.1
19gb|AC144774.3| Mus musculus BAC clone RP24-128I18 from 6, comple... 42 2.1
20gb|AC114663.8| Mus musculus chromosome 1, clone RP24-172O22, com... 40 8.3
21ref|XM_953472.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.3
22gb|AC110102.6| Rattus norvegicus 4 BAC CH230-209C7 (Children's H... 40 8.3
23ref|XM_331452.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.3
24gb|AC087102.3| Rattus norvegicus strain Brown Norway clone RP31-... 40 8.3
25gb|AC139571.2| Mus musculus BAC clone RP24-73K9 from chromosome ... 40 8.3
26gb|AC046160.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.3
27ref|XM_533356.2| PREDICTED: Canis familiaris similar to Nebulin ... 40 8.3
28emb|CT025605.11| Mouse DNA sequence from clone RP23-259D11 on ch... 40 8.3
29gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome... 40 8.3
30gb|AC022008.4| Homo sapiens chromosome 3 clone RP11-63O1 map 3p,... 40 8.3
31gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome... 40 8.3
32gb|AY246778.1| Equus caballus subtracted library fragment 14 40 8.3
33emb|AL451141.13| Human DNA sequence from clone RP11-265E5 on chr... 40 8.3
34gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 8.3
35emb|AL354871.12| Human DNA sequence from clone RP11-66G15 on chr... 40 8.3
36gb|AC127142.3| Rattus norvegicus 4 BAC CH230-41K13 (Children's H... 40 8.3
37emb|AL596096.7| Mouse DNA sequence from clone RP23-42P20 on chro... 40 8.3
38emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 8.3
39gb|BC075902.1| Danio rerio serine (or cysteine) proteinase inhib... 40 8.3
40gb|BC062869.1| Danio rerio serine (or cysteine) proteinase inhib... 40 8.3
41gb|AC150419.2| Branchiostoma floridae clone CH302-73J11, complet... 40 8.3
42gb|AC121515.3| Rattus norvegicus strain Brown Norway clone RP31-... 40 8.3
43gb|AC091561.4| Homo sapiens chromosome 8, clone RP11-388G22, com... 40 8.3
44gb|AC091938.2| Homo sapiens chromosome 5 clone RP11-329N11, comp... 40 8.3
45dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 8.3
46gb|AC008972.8| Homo sapiens chromosome 5 clone CTD-2376I4, compl... 40 8.3
47gb|AC084754.14| Homo sapiens 12p BAC RP11-874G11 (Roswell Park C... 40 8.3
48emb|BX296517.6| Zebrafish DNA sequence from clone DKEYP-4E3 in l... 40 8.3
49emb|AL954812.14| Zebrafish DNA sequence from clone DKEY-50G15, c... 40 8.3
50gb|AC154332.2| Mus musculus BAC clone RP23-259P17 from chromosom... 40 8.3
51gb|AC159625.2| Mus musculus BAC clone RP24-262L7 from chromosome... 40 8.3
52gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 40 8.3
53gb|BC095615.1| Danio rerio cDNA clone IMAGE:7249118, partial cds 40 8.3
54gb|AC012119.8| Homo sapiens chromosome 8, clone RP11-175E9, comp... 40 8.3
55gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, co... 40 8.3
56emb|AL845550.13| Zebrafish DNA sequence from clone CH211-121D13 ... 40 8.3
57emb|BX004784.9| Zebrafish DNA sequence from clone DKEY-82I7 in l... 40 8.3
58gb|AC113456.9| Mus musculus chromosome 1, clone RP23-257E16, com... 40 8.3
59gb|AC161242.2| Mus musculus BAC clone RP24-200E4 from chromosome... 40 8.3
60gb|AC142410.4| Mus musculus BAC clone RP24-173I18 from 1, comple... 40 8.3
61emb|CR936841.11| Mouse DNA sequence from clone DN-491F10 on chro... 40 8.3
62gb|L27172.1|CYICP9AAA Cyprinus carpio serine protease inhibitor ... 40 8.3
63gb|L08689.1|CYIANTTRYP Cyprinus carpio alpha-1-antitrypsin mRNA,... 40 8.3
64emb|AL671989.4| B.floridae DNA sequence from clone XX-BF17P53, c... 40 8.3 
>emb|CR356245.25| Zebrafish DNA sequence from clone CH211-257I15 in linkage group 8,
             complete sequence
          Length = 153042

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 426   agtatttgtaatttgttccttc 447
             ||||||||||||||||||||||
Sbjct: 59922 agtatttgtaatttgttccttc 59943
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>emb|AL133413.5| Human DNA sequence from clone RP11-54K22 on chromosome 9q34.11-34.2
             Contains a NADH dehydrogenase 3, mitochondrial (MTND3)
             pseudogene, complete sequence
          Length = 157790

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 520   gtatatatacataattgaatac 541
             ||||||||||||||||||||||
Sbjct: 51218 gtatatatacataattgaatac 51239
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>emb|AL008732.1|HS67M12 Human DNA sequence from clone RP1-67M12 on chromosome 6p22.1-22.3
             Contains part of a novel gene, complete sequence
          Length = 103268

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 520   gtatatatacataattgaatac 541
             ||||||||||||||||||||||
Sbjct: 11271 gtatatatacataattgaatac 11292
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>gb|AC099509.2| Homo sapiens chromosome 5 clone RP11-254I22, complete sequence
          Length = 145514

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 520   gtatatatacataattgaatac 541
             ||||||||||||||||||||||
Sbjct: 69483 gtatatatacataattgaatac 69504
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>emb|CT005239.3| Pan troglodytes chromosome X clone PTB-125H24 map Xq28, complete
             sequence
          Length = 262483

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 520   gtatatatacataattgaata 540
             |||||||||||||||||||||
Sbjct: 67889 gtatatatacataattgaata 67909
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>gb|AC121982.3| Mus musculus BAC clone RP24-291D6 from chromosome 6, complete sequence
          Length = 167409

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 326    atgcttgcttgcttgtttact 346
              |||||||||||||||||||||
Sbjct: 125029 atgcttgcttgcttgtttact 125049
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>gb|AC182640.3| Pan troglodytes BAC clone CH251-352K16 from chromosome 7, complete
             sequence
          Length = 180187

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 521   tatatatacataattgaatac 541
             |||||||||||||||||||||
Sbjct: 27461 tatatatacataattgaatac 27441
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>emb|AL109854.10|HSJ834A16 Human DNA sequence from clone RP5-834A16 on chromosome X Contains
            part of a gene similar to PGAM and a CpG Island, complete
            sequence
          Length = 47834

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 520  gtatatatacataattgaata 540
            |||||||||||||||||||||
Sbjct: 7755 gtatatatacataattgaata 7735
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>emb|BX296544.8| Zebrafish DNA sequence from clone DKEYP-14B8 in linkage group 21,
             complete sequence
          Length = 168838

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 426   agtatttgtaatttgttcctt 446
             |||||||||||||||||||||
Sbjct: 26695 agtatttgtaatttgttcctt 26715
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>emb|BX470182.12| Zebrafish DNA sequence from clone CH211-195P4 in linkage group 16,
             complete sequence
          Length = 199742

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 426   agtatttgtaatttgttcctt 446
             |||||||||||||||||||||
Sbjct: 32793 agtatttgtaatttgttcctt 32773
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>emb|AL929077.19| Zebrafish DNA sequence from clone CH211-129K19 in linkage group 15,
              complete sequence
          Length = 167866

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 426    agtatttgtaatttgttcctt 446
              |||||||||||||||||||||
Sbjct: 116603 agtatttgtaatttgttcctt 116623
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>gb|AC093677.4| Homo sapiens BAC clone RP11-629B11 from 4, complete sequence
          Length = 148179

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 520   gtatatatacataattgaata 540
             |||||||||||||||||||||
Sbjct: 53283 gtatatatacataattgaata 53263
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>gb|AC093789.3| Homo sapiens BAC clone RP11-219G10 from 4, complete sequence
          Length = 202937

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 320    aacagtatgcttgcttgcttg 340
              |||||||||||||||||||||
Sbjct: 112020 aacagtatgcttgcttgcttg 112000
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>gb|AC148313.3| Pan troglodytes BAC clone CH251-565C10 from chromosome 7, complete
              sequence
          Length = 183205

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 521    tatatatacataattgaatac 541
              |||||||||||||||||||||
Sbjct: 156404 tatatatacataattgaatac 156384
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>gb|AC110763.4| Homo sapiens BAC clone RP11-57E2 from 4, complete sequence
          Length = 84182

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 521   tatatatacataattgaatac 541
             |||||||||||||||||||||
Sbjct: 53990 tatatatacataattgaatac 53970
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>gb|AC016736.6| Homo sapiens BAC clone RP11-393J17 from 2, complete sequence
          Length = 149884

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 414   gctaattaaggtagtatttgtaatt 438
             |||||| ||||||||||||||||||
Sbjct: 39575 gctaataaaggtagtatttgtaatt 39551
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>emb|AL844187.13| Zebrafish DNA sequence from clone DKEY-221D18 in linkage group 16,
              complete sequence
          Length = 168637

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 426    agtatttgtaatttgttcctt 446
              |||||||||||||||||||||
Sbjct: 102737 agtatttgtaatttgttcctt 102757
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>gb|AC006600.4|AC006600 Homo sapiens chromosome 17, clone hRPK.502_F_1, complete sequence
          Length = 170453

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 521    tatatatacataattgaatac 541
              |||||||||||||||||||||
Sbjct: 108940 tatatatacataattgaatac 108920
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>gb|AC144774.3| Mus musculus BAC clone RP24-128I18 from 6, complete sequence
          Length = 143838

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 326   atgcttgcttgcttgtttact 346
             |||||||||||||||||||||
Sbjct: 14367 atgcttgcttgcttgtttact 14387
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>gb|AC114663.8| Mus musculus chromosome 1, clone RP24-172O22, complete sequence
          Length = 167652

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    gtatgcttgcttgcttgttt 343
              ||||||||||||||||||||
Sbjct: 167399 gtatgcttgcttgcttgttt 167418
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>ref|XM_953472.1| Neurospora crassa OR74A hypothetical protein (NCU09061.1) partial
           mRNA
          Length = 711

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ctgaggaggcggccatgatg 109
           ||||||||||||||||||||
Sbjct: 464 ctgaggaggcggccatgatg 483
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>gb|AC110102.6| Rattus norvegicus 4 BAC CH230-209C7 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 219273

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   tgcttgcttgcttgtttact 346
             ||||||||||||||||||||
Sbjct: 92242 tgcttgcttgcttgtttact 92223
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>ref|XM_331452.1| Neurospora crassa OR74A hypothetical protein (NCU09061.1) partial
           mRNA
          Length = 711

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ctgaggaggcggccatgatg 109
           ||||||||||||||||||||
Sbjct: 464 ctgaggaggcggccatgatg 483
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>gb|AC087102.3| Rattus norvegicus strain Brown Norway clone RP31-331N5, complete sequence
          Length = 151673

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    tgcttgcttgcttgtttact 346
              ||||||||||||||||||||
Sbjct: 144670 tgcttgcttgcttgtttact 144689
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>gb|AC139571.2| Mus musculus BAC clone RP24-73K9 from chromosome 15, complete sequence
          Length = 210089

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   tgcttgcttgcttgtttact 346
             ||||||||||||||||||||
Sbjct: 34400 tgcttgcttgcttgtttact 34419
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>gb|AC046160.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-130F23, complete
              sequence
          Length = 214627

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    tgcttgcttgcttgtttact 346
              ||||||||||||||||||||
Sbjct: 131982 tgcttgcttgcttgtttact 131963
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>ref|XM_533356.2| PREDICTED: Canis familiaris similar to Nebulin (LOC476149), mRNA
          Length = 16878

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  ggaggcctgaggaggcggcc 103
           ||||||||||||||||||||
Sbjct: 116 ggaggcctgaggaggcggcc 97
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>emb|CT025605.11| Mouse DNA sequence from clone RP23-259D11 on chromosome 13, complete
             sequence
          Length = 188616

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   gtatgcttgcttgcttgttt 343
             ||||||||||||||||||||
Sbjct: 77757 gtatgcttgcttgcttgttt 77738
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>gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome 1, complete sequence
          Length = 163778

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   tgcttgcttgcttgtttact 346
             ||||||||||||||||||||
Sbjct: 92448 tgcttgcttgcttgtttact 92429
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>gb|AC022008.4| Homo sapiens chromosome 3 clone RP11-63O1 map 3p, complete sequence
          Length = 176051

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 518   acgtatatatacataattgaatac 541
             ||||||||||||||||| ||||||
Sbjct: 73398 acgtatatatacataatggaatac 73421
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>gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome 13, complete sequence
          Length = 211181

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   gtatgcttgcttgcttgttt 343
             ||||||||||||||||||||
Sbjct: 33864 gtatgcttgcttgcttgttt 33845
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>gb|AY246778.1| Equus caballus subtracted library fragment 14
          Length = 771

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 75  caggctcgtggaggcctgag 94
           ||||||||||||||||||||
Sbjct: 349 caggctcgtggaggcctgag 368
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>emb|AL451141.13| Human DNA sequence from clone RP11-265E5 on chromosome 6, complete
             sequence
          Length = 63966

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    gtggaggcctgaggaggcgg 101
             ||||||||||||||||||||
Sbjct: 32457 gtggaggcctgaggaggcgg 32438
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    agtggaccatgcaggcctgc 230
              ||||||||||||||||||||
Sbjct: 695810 agtggaccatgcaggcctgc 695791
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>emb|AL354871.12| Human DNA sequence from clone RP11-66G15 on chromosome 13, complete
             sequence
          Length = 96159

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 520   gtatatatacataattgaatacct 543
             ||||||||||||||| ||||||||
Sbjct: 52279 gtatatatacataatggaatacct 52256
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>gb|AC127142.3| Rattus norvegicus 4 BAC CH230-41K13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 238669

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   tgcttgcttgcttgtttact 346
             ||||||||||||||||||||
Sbjct: 78875 tgcttgcttgcttgtttact 78856
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>emb|AL596096.7| Mouse DNA sequence from clone RP23-42P20 on chromosome 11 Contains the 5'
              end of the Alox12e gene for epidermal arachidonate
              lipoxygenase, the gene for arachidonate 15-lipoxygenase, a
              novel pseudogene, two genes for novel proteins
              (4930563C04Rik, 1110030J09Rik), a Mitochondrial 28S
              ribosomal protein pseudogene, a NADH dehydrogenase
              (ubiquinone) 1 beta subcomplex 8 (Ndufb8) pseudogene, the
              gene for a novel protein similar to Beta-arrestin 2
              (Arrestin, beta 2) (LOC216869), the Cxcl16 gene for
              chemokine (C-X-C motif) ligand 16, the gene for a novel
              protein similar to human zinc finger MYND domain containg
              15 (ZMYND15), the 5' end of the gene for a novel protein
              (2010003F10Rik) and three CpG islands, complete sequence
          Length = 193277

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    gcttgcttgcttgtttacta 347
              ||||||||||||||||||||
Sbjct: 104218 gcttgcttgcttgtttacta 104199
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    ggcgcgcagccgccgatgcc 129
              ||||||||||||||||||||
Sbjct: 180727 ggcgcgcagccgccgatgcc 180708
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>gb|BC075902.1| Danio rerio serine (or cysteine) proteinase inhibitor, clade A
           (alpha-1 antiproteinase, antitrypsin), member 1, mRNA
           (cDNA clone IMAGE:7049407), partial cds
          Length = 1450

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 tccttcccgtggtggagatg 461
           ||||||||||||||||||||
Sbjct: 160 tccttcccgtggtggagatg 141
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>gb|BC062869.1| Danio rerio serine (or cysteine) proteinase inhibitor, clade A
           (alpha-1 antiproteinase, antitrypsin), member 1, mRNA
           (cDNA clone IMAGE:6997096), partial cds
          Length = 1429

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 tccttcccgtggtggagatg 461
           ||||||||||||||||||||
Sbjct: 159 tccttcccgtggtggagatg 140
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>gb|AC150419.2| Branchiostoma floridae clone CH302-73J11, complete sequence
          Length = 185777

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   atttgtaatttgttccttcc 448
             ||||||||||||||||||||
Sbjct: 66387 atttgtaatttgttccttcc 66406
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>gb|AC121515.3| Rattus norvegicus strain Brown Norway clone RP31-425H6, complete
             sequence
          Length = 152757

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   tgcttgcttgcttgtttact 346
             ||||||||||||||||||||
Sbjct: 14897 tgcttgcttgcttgtttact 14916
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>gb|AC091561.4| Homo sapiens chromosome 8, clone RP11-388G22, complete sequence
          Length = 191037

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 516   acacgtatatatacataatt 535
             ||||||||||||||||||||
Sbjct: 75681 acacgtatatatacataatt 75662
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>gb|AC091938.2| Homo sapiens chromosome 5 clone RP11-329N11, complete sequence
          Length = 70122

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   gtatgcttgcttgcttgttt 343
             ||||||||||||||||||||
Sbjct: 58100 gtatgcttgcttgcttgttt 58081
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 95      gaggcggccatgatgggcgc 114
               ||||||||||||||||||||
Sbjct: 2617736 gaggcggccatgatgggcgc 2617717



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 95      gaggcggccatgatgggcgc 114
               ||||||||||||||||||||
Sbjct: 2602776 gaggcggccatgatgggcgc 2602795
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>gb|AC008972.8| Homo sapiens chromosome 5 clone CTD-2376I4, complete sequence
          Length = 98842

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   tgcttgcttgcttgtttact 346
             ||||||||||||||||||||
Sbjct: 89497 tgcttgcttgcttgtttact 89478
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>gb|AC084754.14| Homo sapiens 12p BAC RP11-874G11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 176626

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 522   atatatacataattgaatac 541
             ||||||||||||||||||||
Sbjct: 50524 atatatacataattgaatac 50543
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>emb|BX296517.6| Zebrafish DNA sequence from clone DKEYP-4E3 in linkage group 25,
             complete sequence
          Length = 110298

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 522   atatatacataattgaatac 541
             ||||||||||||||||||||
Sbjct: 86580 atatatacataattgaatac 86599
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>emb|AL954812.14| Zebrafish DNA sequence from clone DKEY-50G15, complete sequence
          Length = 192304

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 522    atatatacataattgaatac 541
              ||||||||||||||||||||
Sbjct: 167019 atatatacataattgaatac 167038
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>gb|AC154332.2| Mus musculus BAC clone RP23-259P17 from chromosome 14, complete
            sequence
          Length = 208155

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  tgcttgcttgcttgtttact 346
            ||||||||||||||||||||
Sbjct: 8789 tgcttgcttgcttgtttact 8770
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>gb|AC159625.2| Mus musculus BAC clone RP24-262L7 from chromosome 12, complete sequence
          Length = 189979

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    tgcttgcttgcttgtttact 346
              ||||||||||||||||||||
Sbjct: 165339 tgcttgcttgcttgtttact 165320
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>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    tgcttgcttgcttgtttact 346
              ||||||||||||||||||||
Sbjct: 350918 tgcttgcttgcttgtttact 350937
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>gb|BC095615.1| Danio rerio cDNA clone IMAGE:7249118, partial cds
          Length = 1336

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 tccttcccgtggtggagatg 461
           ||||||||||||||||||||
Sbjct: 61  tccttcccgtggtggagatg 42
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>gb|AC012119.8| Homo sapiens chromosome 8, clone RP11-175E9, complete sequence
          Length = 154898

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     gtaggtcgctgatgcaaccc 45
              ||||||||||||||||||||
Sbjct: 118153 gtaggtcgctgatgcaaccc 118134
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>gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, complete sequence
          Length = 165190

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   gtatgcttgcttgcttgttt 343
             ||||||||||||||||||||
Sbjct: 76746 gtatgcttgcttgcttgttt 76765
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>emb|AL845550.13| Zebrafish DNA sequence from clone CH211-121D13 in linkage group 20,
             complete sequence
          Length = 163676

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   tccttcccgtggtggagatg 461
             ||||||||||||||||||||
Sbjct: 85219 tccttcccgtggtggagatg 85200
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>emb|BX004784.9| Zebrafish DNA sequence from clone DKEY-82I7 in linkage group 25, complete
              sequence
          Length = 160429

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 522    atatatacataattgaatac 541
              ||||||||||||||||||||
Sbjct: 111225 atatatacataattgaatac 111206
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>gb|AC113456.9| Mus musculus chromosome 1, clone RP23-257E16, complete sequence
          Length = 174902

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    gtatgcttgcttgcttgttt 343
              ||||||||||||||||||||
Sbjct: 131215 gtatgcttgcttgcttgttt 131196
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>gb|AC161242.2| Mus musculus BAC clone RP24-200E4 from chromosome 12, complete sequence
          Length = 179665

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   tgcttgcttgcttgtttact 346
             ||||||||||||||||||||
Sbjct: 83288 tgcttgcttgcttgtttact 83269
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>gb|AC142410.4| Mus musculus BAC clone RP24-173I18 from 1, complete sequence
          Length = 145213

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    tgcttgcttgcttgtttact 346
              ||||||||||||||||||||
Sbjct: 143084 tgcttgcttgcttgtttact 143103
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>emb|CR936841.11| Mouse DNA sequence from clone DN-491F10 on chromosome 11, complete
             sequence
          Length = 114510

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   gcttgcttgcttgtttacta 347
             ||||||||||||||||||||
Sbjct: 56051 gcttgcttgcttgtttacta 56032
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>gb|L27172.1|CYICP9AAA Cyprinus carpio serine protease inhibitor (CP9) mRNA, complete cds
          Length = 1396

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 tccttcccgtggtggagatg 461
           ||||||||||||||||||||
Sbjct: 116 tccttcccgtggtggagatg 97
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>gb|L08689.1|CYIANTTRYP Cyprinus carpio alpha-1-antitrypsin mRNA, complete cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 tccttcccgtggtggagatg 461
           ||||||||||||||||||||
Sbjct: 108 tccttcccgtggtggagatg 89
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>emb|AL671989.4| B.floridae DNA sequence from clone XX-BF17P53, complete sequence
          Length = 42326

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   tgcttgcttgcttgtttact 346
             ||||||||||||||||||||
Sbjct: 27611 tgcttgcttgcttgtttact 27592


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,097,022
Number of Sequences: 3902068
Number of extensions: 5097022
Number of successful extensions: 116323
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116083
Number of HSP's gapped (non-prelim): 240
length of query: 609
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 586
effective length of database: 17,143,297,704
effective search space: 10045972454544
effective search space used: 10045972454544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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