ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baaln23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482707.1| Oryza sativa (japonica cultivar-group), mRNA 408 e-111
2dbj|AK060745.1| Oryza sativa (japonica cultivar-group) cDNA clon... 408 e-111
3dbj|AK066110.1| Oryza sativa (japonica cultivar-group) cDNA clon... 392 e-106
4dbj|AK062791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 6e-50
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 170 4e-39
6dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic D... 170 4e-39
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 123 8e-25
8dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic D... 123 8e-25
9ref|NM_114192.3| Arabidopsis thaliana DNA binding / protein bind... 119 1e-23
10gb|BT010580.1| Arabidopsis thaliana At3g43240 mRNA, complete cds 119 1e-23
11gb|AY105342.1| Zea mays PCO101952 mRNA sequence 76 2e-10
12gb|AC130802.36| Medicago truncatula clone mth2-28b21, complete s... 54 6e-04
13gb|AC183502.5| Medicago truncatula clone mth2-75g17, complete se... 52 0.002
14gb|AY271671.1| Gossypium barbadense fiber protein Fb21 mRNA, par... 52 0.002
15emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome 3, BA... 48 0.036
16ref|XM_958243.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.14
17ref|XM_325199.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.14
18emb|BX284748.1|NCB15B24 Neurospora crassa DNA linkage group II B... 46 0.14
19gb|AC005213.1| Homo sapiens chromosome 5, BAC clone 84E9 (LBNL H... 42 2.2
20emb|AL691497.8| Human DNA sequence from clone RP11-542C10 on chr... 42 2.2
21gb|BC100494.1| Mus musculus cDNA clone IMAGE:30916454 42 2.2
22ref|XM_691475.1| PREDICTED: Danio rerio similar to myeloid/lymph... 42 2.2
23gb|BC050984.1| Mus musculus, clone IMAGE:6771240, mRNA 42 2.2
24gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome... 42 2.2
25emb|BX324233.5| Zebrafish DNA sequence from clone CH211-230L11 i... 42 2.2
26gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
27gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
28gb|AC125162.4| Mus musculus BAC clone RP24-421D9 from chromosome... 40 8.7
29emb|X97964.1|CJASD C.jejuni asd gene 40 8.7
30gb|AF399011.1| Pseudomonas phage phiKZ, complete genome 40 8.7
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
32gb|DQ163920.1| Bacteriophage SD1-M, complete genome 40 8.7
33ref|XM_311163.2| Anopheles gambiae str. PEST ENSANGP00000001513 ... 40 8.7
34gb|AC153599.6| Mus musculus 6 BAC RP23-227G6 (Roswell Park Cance... 40 8.7
35emb|BX255920.4| Zebrafish DNA sequence from clone CH211-155K23 i... 40 8.7
36gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 40 8.7 
>ref|XM_482707.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2890

 Score =  408 bits (206), Expect = e-111
 Identities = 449/530 (84%)
 Strand = Plus / Plus

                                                                        
Query: 94   aatcctcttccaatgaagaaacatgggtgtgatcggttgcctatccaagtgtgctctgag 153
            |||||||| |||||||||||||||||||||||||||||||||||   | | |||||||| 
Sbjct: 2078 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctattggaatttgctctgaa 2137

                                                                        
Query: 154  gaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcgtt 213
            || ||||| || || ||||| ||||||||| || |||||||||| |||   ||||| |||
Sbjct: 2138 gaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccgacttgtt 2197

                                                                        
Query: 214  cctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatctc 273
            ||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| | 
Sbjct: 2198 cctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgattta 2257

                                                                        
Query: 274  tataacttgtacaaagaggtggtgtccaggggtggcttttatgtgggcaatggtataaac 333
            ||||||||||| ||||||||||| ||||| || || |||||||| |||||||| ||||| 
Sbjct: 2258 tataacttgtataaagaggtggtatccagaggcggattttatgtaggcaatggcataaat 2317

                                                                        
Query: 334  tggaagggccaagtcttttcaaagatgcgaaaccataccgtaacaaatagaatgaccggt 393
            ||||| || |||||||||||||||||| | |||||||| || ||||| | |||||| |||
Sbjct: 2318 tggaaaggtcaagtcttttcaaagatgagcaaccatactgttacaaacaaaatgacgggt 2377

                                                                        
Query: 394  gtcgggaacacactgaaaagacactacgagacctacttgctggaatatgagctatcgcac 453
            || || |||||  | || ||||| |||||||| |||||| ||||||| || || || || 
Sbjct: 2378 gttggaaacacgttaaagagacattacgagacatacttgttggaatacgaactttcacat 2437

                                                                        
Query: 454  gacgatgtggatggggagtgctgtttgctttgtcacagtagcgctcctggagattgggtg 513
            || ||||| | |||||| ||||| || || || |||||||| ||||| || |||||||| 
Sbjct: 2438 gatgatgtcggtggggaatgctgcttactctgccacagtagtgctccaggtgattgggtt 2497

                                                                        
Query: 514  aactgtggtttatgcggcgaatgggctcatttcggctgtgatagacggcaagggctgggc 573
            |||||||| || ||||| |||||||| || || || |||||||||||||||||||| |||
Sbjct: 2498 aactgtgggttgtgcggtgaatgggcgcactttgggtgtgatagacggcaagggctaggc 2557

                                                              
Query: 574  actttcaaggattacgcgaagacagatgggttggaatacatctgccccca 623
            || |||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 2558 acattcaaggactatgcgaagacagatgggttggaatatatctgccccca 2607
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>dbj|AK060745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E10, full
            insert sequence
          Length = 2122

 Score =  408 bits (206), Expect = e-111
 Identities = 449/530 (84%)
 Strand = Plus / Plus

                                                                        
Query: 94   aatcctcttccaatgaagaaacatgggtgtgatcggttgcctatccaagtgtgctctgag 153
            |||||||| |||||||||||||||||||||||||||||||||||   | | |||||||| 
Sbjct: 1309 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctattggaatttgctctgaa 1368

                                                                        
Query: 154  gaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcgtt 213
            || ||||| || || ||||| ||||||||| || |||||||| | |||   ||||| |||
Sbjct: 1369 gaagacttcttaaaagatgtcatgcaatttctacttcagaggaggcacacccgacttgtt 1428

                                                                        
Query: 214  cctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatctc 273
            ||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| | 
Sbjct: 1429 cctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgattta 1488

                                                                        
Query: 274  tataacttgtacaaagaggtggtgtccaggggtggcttttatgtgggcaatggtataaac 333
            ||||||||||| ||||||||||| ||||| || || |||||||| |||||||| ||||| 
Sbjct: 1489 tataacttgtataaagaggtggtatccagaggcggattttatgtaggcaatggcataaat 1548

                                                                        
Query: 334  tggaagggccaagtcttttcaaagatgcgaaaccataccgtaacaaatagaatgaccggt 393
            ||||| || |||||||||||||||||| | |||||||| || ||||| | |||||| |||
Sbjct: 1549 tggaaaggtcaagtcttttcaaagatgagcaaccatactgttacaaacaaaatgacgggt 1608

                                                                        
Query: 394  gtcgggaacacactgaaaagacactacgagacctacttgctggaatatgagctatcgcac 453
            || || |||||  | || ||||| |||||||| |||||| ||||||| || || || || 
Sbjct: 1609 gttggaaacacgttaaagagacattacgagacatacttgttggaatacgaactttcacat 1668

                                                                        
Query: 454  gacgatgtggatggggagtgctgtttgctttgtcacagtagcgctcctggagattgggtg 513
            || ||||| | |||||| ||||| || || || |||||||| ||||| || |||||||| 
Sbjct: 1669 gatgatgtcggtggggaatgctgcttactctgccacagtagtgctccaggtgattgggtt 1728

                                                                        
Query: 514  aactgtggtttatgcggcgaatgggctcatttcggctgtgatagacggcaagggctgggc 573
            |||||||| || ||||| |||||||| || || || |||||||||||||||||||| |||
Sbjct: 1729 aactgtgggttgtgcggtgaatgggcgcactttgggtgtgatagacggcaagggctaggc 1788

                                                              
Query: 574  actttcaaggattacgcgaagacagatgggttggaatacatctgccccca 623
            || ||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 1789 acattcaaggattatgcgaagacagatgggttggaatatatctgccccca 1838
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>dbj|AK066110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J22, full
            insert sequence
          Length = 2890

 Score =  392 bits (198), Expect = e-106
 Identities = 447/530 (84%)
 Strand = Plus / Plus

                                                                        
Query: 94   aatcctcttccaatgaagaaacatgggtgtgatcggttgcctatccaagtgtgctctgag 153
            |||||||| |||||||||||||||||||||||||||||||||||   | | |||||||| 
Sbjct: 2078 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctattggaatttgctctgaa 2137

                                                                        
Query: 154  gaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcgtt 213
            || ||||| || || ||||| ||||||||| || |||||||||| |||   || || |||
Sbjct: 2138 gaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccggcttgtt 2197

                                                                        
Query: 214  cctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatctc 273
            ||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| | 
Sbjct: 2198 cctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgattta 2257

                                                                        
Query: 274  tataacttgtacaaagaggtggtgtccaggggtggcttttatgtgggcaatggtataaac 333
            ||||||||||| ||||||||||| ||||| || || |||||||| |||||||| ||||| 
Sbjct: 2258 tataacttgtataaagaggtggtatccagaggcggattttatgtaggcaatggcataaat 2317

                                                                        
Query: 334  tggaagggccaagtcttttcaaagatgcgaaaccataccgtaacaaatagaatgaccggt 393
            ||||| || |||||||||||||||||| | |||||||| || ||||| | |||||| |||
Sbjct: 2318 tggaaaggtcaagtcttttcaaagatgagcaaccatactgttacaaacaaaatgacgggt 2377

                                                                        
Query: 394  gtcgggaacacactgaaaagacactacgagacctacttgctggaatatgagctatcgcac 453
            || || |||||  | || ||||| |||||||| |||||| ||||||| || || || || 
Sbjct: 2378 gttggaaacacgttaaagagacattacgagacatacttgttggaatacgaactttcacat 2437

                                                                        
Query: 454  gacgatgtggatggggagtgctgtttgctttgtcacagtagcgctcctggagattgggtg 513
            || ||||| | |||||| ||||| || || || |||||||| ||||| || |||||||| 
Sbjct: 2438 gatgatgtcggtggggaatgctgcttactctgccacagtagtgctccaggtgattgggtt 2497

                                                                        
Query: 514  aactgtggtttatgcggcgaatgggctcatttcggctgtgatagacggcaagggctgggc 573
            |||||||| || ||||| |||||||| || || || |||||||||||||||||| | |||
Sbjct: 2498 aactgtgggttgtgcggtgaatgggcgcactttgggtgtgatagacggcaagggttaggc 2557

                                                              
Query: 574  actttcaaggattacgcgaagacagatgggttggaatacatctgccccca 623
            || |||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 2558 acattcaaggactatgcgaagacagatgggttggaatatatctgccccca 2607
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>dbj|AK062791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-C02, full
           insert sequence
          Length = 506

 Score =  206 bits (104), Expect = 6e-50
 Identities = 176/200 (88%)
 Strand = Plus / Plus

                                                                       
Query: 436 gaatatgagctatcgcacgacgatgtggatggggagtgctgtttgctttgtcacagtagc 495
           |||||||||||| | || || ||||| || ||||| |||||||||||||| |||||||||
Sbjct: 1   gaatatgagctagctcatgatgatgtagacggggaatgctgtttgctttgccacagtagc 60

                                                                       
Query: 496 gctcctggagattgggtgaactgtggtttatgcggcgaatgggctcatttcggctgtgat 555
           ||||||||||||||||||||||||||||| || || |||||||| ||||| || ||||| 
Sbjct: 61  gctcctggagattgggtgaactgtggtttgtgtggtgaatgggcacattttggttgtgac 120

                                                                       
Query: 556 agacggcaagggctgggcactttcaaggattacgcgaagacagatgggttggaatacatc 615
           ||||| ||||| || ||||||||||||||||| || |||||||||||| |||||||||||
Sbjct: 121 agacgacaaggcctaggcactttcaaggattatgcaaagacagatgggctggaatacatc 180

                               
Query: 616 tgcccccattgtagtatagc 635
           ||||| || |||||| ||||
Sbjct: 181 tgccctcactgtagtctagc 200
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  170 bits (86), Expect = 4e-39
 Identities = 128/142 (90%)
 Strand = Plus / Minus

                                                                            
Query: 152      aggaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcg 211
                |||||||||| ||||||||||| ||||| ||||||||||||||||| ||  |||||||||
Sbjct: 15883832 aggaggacttcttgaaggatgtcatgcagtttttaattcagaggggtcataatcgactcg 15883773

                                                                            
Query: 212      ttcctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatc 271
                | ||||||||||| ||||||||||||||||| || ||||||||||| || |||||||| |
Sbjct: 15883772 tacctcatggaggactagctgaatttcctgaggccgtccttaatgcgaagcgccttgacc 15883713

                                      
Query: 272      tctataacttgtacaaagaggt 293
                | ||||||||||||||||||||
Sbjct: 15883712 tatataacttgtacaaagaggt 15883691



 Score =  139 bits (70), Expect = 1e-29
 Identities = 94/102 (92%)
 Strand = Plus / Minus

                                                                            
Query: 290      aggtggtgtccaggggtggcttttatgtgggcaatggtataaactggaagggccaagtct 349
                |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 15883594 aggtggtgtctaggggtggcttttatgtaggcaatggtataaactggaagggtcaagtct 15883535

                                                          
Query: 350      tttcaaagatgcgaaaccataccgtaacaaatagaatgaccg 391
                | || |||||||| |||||||| || ||||||||||||||||
Sbjct: 15883534 tctcgaagatgcgtaaccatactgtgacaaatagaatgaccg 15883493



 Score =  115 bits (58), Expect = 2e-22
 Identities = 94/106 (88%)
 Strand = Plus / Minus

                                                                            
Query: 49       aaatcaacttcagggccatctcatgctcaatcgatcattcagctgaatcctcttccaatg 108
                ||||||||||||||||||||||||||||| || |||||||| ||||| || || ||  ||
Sbjct: 15884022 aaatcaacttcagggccatctcatgctcagtcaatcattcaactgaacccactgcctctg 15883963

                                                              
Query: 109      aagaaacatgggtgtgatcggttgcctatccaagtgtgctctgagg 154
                ||||||||||| ||||||||||||||||| ||  ||||||||||||
Sbjct: 15883962 aagaaacatggatgtgatcggttgcctattcagatgtgctctgagg 15883917



 Score =  109 bits (55), Expect = 1e-20
 Identities = 85/95 (89%)
 Strand = Plus / Minus

                                                                            
Query: 489      cagtagcgctcctggagattgggtgaactgtggtttatgcggcgaatgggctcatttcgg 548
                |||||||||||||||||||||||||||||||||||| || || |||||||| ||||| ||
Sbjct: 15882892 cagtagcgctcctggagattgggtgaactgtggtttgtgtggtgaatgggcacattttgg 15882833

                                                   
Query: 549      ctgtgatagacggcaagggctgggcactttcaagg 583
                 ||||| ||||| ||||| || |||||||||||||
Sbjct: 15882832 ttgtgacagacgacaaggcctaggcactttcaagg 15882798



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                            
Query: 391      ggtgtcgggaacacactgaaaagacactacgagacctacttgctggaatatgagctatcg 450
                ||||| || ||||||||||||||||| ||||| || || || ||||||||||||||| | 
Sbjct: 15883087 ggtgttggaaacacactgaaaagacattacgaaacatatttactggaatatgagctagct 15883028

                                                         
Query: 451      cacgacgatgtggatggggagtgctgtttgctttgtcacag 491
                || || ||||| || ||||| |||||||||||||| |||||
Sbjct: 15883027 catgatgatgtagacggggaatgctgtttgctttgccacag 15882987



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                       
Query: 581      aggattacgcgaagacagatgggttggaatacatctgcccccattgtagtatagc 635
                ||||||| || |||||||||||| |||||||||||||||| || |||||| ||||
Sbjct: 15882722 aggattatgcaaagacagatgggctggaatacatctgccctcactgtagtctagc 15882668
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>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1081_G10
          Length = 107955

 Score =  170 bits (86), Expect = 4e-39
 Identities = 128/142 (90%)
 Strand = Plus / Minus

                                                                         
Query: 152   aggaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcg 211
             |||||||||| ||||||||||| ||||| ||||||||||||||||| ||  |||||||||
Sbjct: 46958 aggaggacttcttgaaggatgtcatgcagtttttaattcagaggggtcataatcgactcg 46899

                                                                         
Query: 212   ttcctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatc 271
             | ||||||||||| ||||||||||||||||| || ||||||||||| || |||||||| |
Sbjct: 46898 tacctcatggaggactagctgaatttcctgaggccgtccttaatgcgaagcgccttgacc 46839

                                   
Query: 272   tctataacttgtacaaagaggt 293
             | ||||||||||||||||||||
Sbjct: 46838 tatataacttgtacaaagaggt 46817



 Score =  139 bits (70), Expect = 1e-29
 Identities = 94/102 (92%)
 Strand = Plus / Minus

                                                                         
Query: 290   aggtggtgtccaggggtggcttttatgtgggcaatggtataaactggaagggccaagtct 349
             |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 46720 aggtggtgtctaggggtggcttttatgtaggcaatggtataaactggaagggtcaagtct 46661

                                                       
Query: 350   tttcaaagatgcgaaaccataccgtaacaaatagaatgaccg 391
             | || |||||||| |||||||| || ||||||||||||||||
Sbjct: 46660 tctcgaagatgcgtaaccatactgtgacaaatagaatgaccg 46619



 Score =  115 bits (58), Expect = 2e-22
 Identities = 94/106 (88%)
 Strand = Plus / Minus

                                                                         
Query: 49    aaatcaacttcagggccatctcatgctcaatcgatcattcagctgaatcctcttccaatg 108
             ||||||||||||||||||||||||||||| || |||||||| ||||| || || ||  ||
Sbjct: 47148 aaatcaacttcagggccatctcatgctcagtcaatcattcaactgaacccactgcctctg 47089

                                                           
Query: 109   aagaaacatgggtgtgatcggttgcctatccaagtgtgctctgagg 154
             ||||||||||| ||||||||||||||||| ||  ||||||||||||
Sbjct: 47088 aagaaacatggatgtgatcggttgcctattcagatgtgctctgagg 47043



 Score =  109 bits (55), Expect = 1e-20
 Identities = 85/95 (89%)
 Strand = Plus / Minus

                                                                         
Query: 489   cagtagcgctcctggagattgggtgaactgtggtttatgcggcgaatgggctcatttcgg 548
             |||||||||||||||||||||||||||||||||||| || || |||||||| ||||| ||
Sbjct: 46018 cagtagcgctcctggagattgggtgaactgtggtttgtgtggtgaatgggcacattttgg 45959

                                                
Query: 549   ctgtgatagacggcaagggctgggcactttcaagg 583
              ||||| ||||| ||||| || |||||||||||||
Sbjct: 45958 ttgtgacagacgacaaggcctaggcactttcaagg 45924



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                         
Query: 391   ggtgtcgggaacacactgaaaagacactacgagacctacttgctggaatatgagctatcg 450
             ||||| || ||||||||||||||||| ||||| || || || ||||||||||||||| | 
Sbjct: 46213 ggtgttggaaacacactgaaaagacattacgaaacatatttactggaatatgagctagct 46154

                                                      
Query: 451   cacgacgatgtggatggggagtgctgtttgctttgtcacag 491
             || || ||||| || ||||| |||||||||||||| |||||
Sbjct: 46153 catgatgatgtagacggggaatgctgtttgctttgccacag 46113



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                    
Query: 581   aggattacgcgaagacagatgggttggaatacatctgcccccattgtagtatagc 635
             ||||||| || |||||||||||| |||||||||||||||| || |||||| ||||
Sbjct: 45848 aggattatgcaaagacagatgggctggaatacatctgccctcactgtagtctagc 45794
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  123 bits (62), Expect = 8e-25
 Identities = 122/142 (85%)
 Strand = Plus / Minus

                                                                            
Query: 152      aggaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcg 211
                |||| ||||| || || ||||| ||||||||| || |||||||||| |||   ||||| |
Sbjct: 22033755 aggaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccgacttg 22033696

                                                                            
Query: 212      ttcctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatc 271
                ||||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| 
Sbjct: 22033695 ttcctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgatt 22033636

                                      
Query: 272      tctataacttgtacaaagaggt 293
                | ||||||||||| ||||||||
Sbjct: 22033635 tatataacttgtataaagaggt 22033614



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                            
Query: 489      cagtagcgctcctggagattgggtgaactgtggtttatgcggcgaatgggctcatttcgg 548
                |||||| ||||| || |||||||| |||||||| || ||||| |||||||| || || ||
Sbjct: 22032207 cagtagtgctccaggtgattgggttaactgtgggttgtgcggtgaatgggcgcactttgg 22032148

                                                   
Query: 549      ctgtgatagacggcaagggctgggcactttcaagg 583
                 |||||||||||||||||||| ||||| |||||||
Sbjct: 22032147 gtgtgatagacggcaagggctaggcacattcaagg 22032113



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                            
Query: 94       aatcctcttccaatgaagaaacatgggtgtgatcggttgcctat 137
                |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 22033912 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctat 22033869



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                            
Query: 290      aggtggtgtccaggggtggcttttatgtgggcaatggtataaactggaagggccaagtct 349
                ||||||| ||||| || || |||||||| |||||||| ||||| ||||| || |||||||
Sbjct: 22033493 aggtggtatccagaggcggattttatgtaggcaatggcataaattggaaaggtcaagtct 22033434

                                                        
Query: 350      tttcaaagatgcgaaaccataccgtaacaaatagaatgac 389
                ||||||||||| | |||||||| || ||||| | ||||||
Sbjct: 22033433 tttcaaagatgagcaaccatactgttacaaacaaaatgac 22033394



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 589      gcgaagacagatgggttggaatacatctgccccca 623
                ||||||||||||||||||||||| |||||||||||
Sbjct: 22032011 gcgaagacagatgggttggaatatatctgccccca 22031977
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>dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1005_H01
          Length = 128124

 Score =  123 bits (62), Expect = 8e-25
 Identities = 122/142 (85%)
 Strand = Plus / Minus

                                                                          
Query: 152    aggaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcg 211
              |||| ||||| || || ||||| ||||||||| || |||||||||| |||   ||||| |
Sbjct: 119504 aggaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccgacttg 119445

                                                                          
Query: 212    ttcctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatc 271
              ||||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| 
Sbjct: 119444 ttcctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgatt 119385

                                    
Query: 272    tctataacttgtacaaagaggt 293
              | ||||||||||| ||||||||
Sbjct: 119384 tatataacttgtataaagaggt 119363



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                          
Query: 489    cagtagcgctcctggagattgggtgaactgtggtttatgcggcgaatgggctcatttcgg 548
              |||||| ||||| || |||||||| |||||||| || ||||| |||||||| || || ||
Sbjct: 117956 cagtagtgctccaggtgattgggttaactgtgggttgtgcggtgaatgggcgcactttgg 117897

                                                 
Query: 549    ctgtgatagacggcaagggctgggcactttcaagg 583
               |||||||||||||||||||| ||||| |||||||
Sbjct: 117896 gtgtgatagacggcaagggctaggcacattcaagg 117862



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                          
Query: 94     aatcctcttccaatgaagaaacatgggtgtgatcggttgcctat 137
              |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 119661 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctat 119618



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                          
Query: 290    aggtggtgtccaggggtggcttttatgtgggcaatggtataaactggaagggccaagtct 349
              ||||||| ||||| || || |||||||| |||||||| ||||| ||||| || |||||||
Sbjct: 119242 aggtggtatccagaggcggattttatgtaggcaatggcataaattggaaaggtcaagtct 119183

                                                      
Query: 350    tttcaaagatgcgaaaccataccgtaacaaatagaatgac 389
              ||||||||||| | |||||||| || ||||| | ||||||
Sbjct: 119182 tttcaaagatgagcaaccatactgttacaaacaaaatgac 119143



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                 
Query: 589    gcgaagacagatgggttggaatacatctgccccca 623
              ||||||||||||||||||||||| |||||||||||
Sbjct: 117760 gcgaagacagatgggttggaatatatctgccccca 117726
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>ref|NM_114192.3| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding
            AT3G43240 mRNA, complete cds
          Length = 2642

 Score =  119 bits (60), Expect = 1e-23
 Identities = 284/356 (79%), Gaps = 2/356 (0%)
 Strand = Plus / Plus

                                                                        
Query: 257  caaaacgccttgatctctataacttgtacaaagaggtggtgtccaggggtggcttttatg 316
            ||||||| ||||||||||  |||||||| | |||||| || ||  |||| || ||  |||
Sbjct: 2113 caaaacggcttgatctcttcaacttgtatagagaggttgtatcacggggagggttccatg 2172

                                                                        
Query: 317  tgggcaatggtataaactggaagggccaagtcttttcaaagatgcgaaaccataccgtaa 376
            | || ||||| || ||||||||||| ||||| || ||||||||||| ||||| ||  | |
Sbjct: 2173 taggtaatgggatcaactggaagggacaagttttctcaaagatgcgcaaccacacactca 2232

                                                                        
Query: 377  caaatagaatgaccggtgtcgggaacacactgaaaagacactacgagacctacttgctgg 436
            |||| |||||||| ||||| || || || |||||||||||||| ||||| ||  |  |||
Sbjct: 2233 caaacagaatgactggtgtgggtaataccctgaaaagacactatgagacgtatctattgg 2292

                                                                        
Query: 437  aatatgagctat-cgcacgacgatgtggatggggagtgctgtttgctttgtcacagtagc 495
            | |||||| ||| | || || ||||| ||||| |||||||||||  | |||| |||||||
Sbjct: 2293 agtatgag-tatgctcatgatgatgtagatggagagtgctgtttaatatgtcgcagtagc 2351

                                                                        
Query: 496  gctcctggagattgggtgaactgtggtttatgcggcgaatgggctcatttcggctgtgat 555
             |  |||| || |||||||||||||| | ||| || || |||||||||||||| ||||| 
Sbjct: 2352 acagctggtgactgggtgaactgtggatcatgtggagagtgggctcatttcggatgtgac 2411

                                                                    
Query: 556  agacggcaagggctgggcactttcaaggattacgcgaagacagatgggttggaata 611
            ||| |||  || || ||| | |||||||| || || || |||||||||||||||||
Sbjct: 2412 agaaggcctggcctcggcgccttcaaggactatgcaaaaacagatgggttggaata 2467
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>gb|BT010580.1| Arabidopsis thaliana At3g43240 mRNA, complete cds
          Length = 2244

 Score =  119 bits (60), Expect = 1e-23
 Identities = 284/356 (79%), Gaps = 2/356 (0%)
 Strand = Plus / Plus

                                                                        
Query: 257  caaaacgccttgatctctataacttgtacaaagaggtggtgtccaggggtggcttttatg 316
            ||||||| ||||||||||  |||||||| | |||||| || ||  |||| || ||  |||
Sbjct: 1811 caaaacggcttgatctcttcaacttgtatagagaggttgtatcacggggagggttccatg 1870

                                                                        
Query: 317  tgggcaatggtataaactggaagggccaagtcttttcaaagatgcgaaaccataccgtaa 376
            | || ||||| || ||||||||||| ||||| || ||||||||||| ||||| ||  | |
Sbjct: 1871 taggtaatgggatcaactggaagggacaagttttctcaaagatgcgcaaccacacactca 1930

                                                                        
Query: 377  caaatagaatgaccggtgtcgggaacacactgaaaagacactacgagacctacttgctgg 436
            |||| |||||||| ||||| || || || |||||||||||||| ||||| ||  |  |||
Sbjct: 1931 caaacagaatgactggtgtgggtaataccctgaaaagacactatgagacgtatctattgg 1990

                                                                        
Query: 437  aatatgagctat-cgcacgacgatgtggatggggagtgctgtttgctttgtcacagtagc 495
            | |||||| ||| | || || ||||| ||||| |||||||||||  | |||| |||||||
Sbjct: 1991 agtatgag-tatgctcatgatgatgtagatggagagtgctgtttaatatgtcgcagtagc 2049

                                                                        
Query: 496  gctcctggagattgggtgaactgtggtttatgcggcgaatgggctcatttcggctgtgat 555
             |  |||| || |||||||||||||| | ||| || || |||||||||||||| ||||| 
Sbjct: 2050 acagctggtgactgggtgaactgtggatcatgtggagagtgggctcatttcggatgtgac 2109

                                                                    
Query: 556  agacggcaagggctgggcactttcaaggattacgcgaagacagatgggttggaata 611
            ||| |||  || || ||| | |||||||| || || || |||||||||||||||||
Sbjct: 2110 agaaggcctggcctcggcgccttcaaggactatgcaaaaacagatgggttggaata 2165
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>gb|AY105342.1| Zea mays PCO101952 mRNA sequence
          Length = 587

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                       
Query: 502 ggagattgggtgaactgtggtttatgcggcgaatgggctcatttcggctgtgatagacgg 561
           ||||||||||||||||| |||||||| || ||||||||||| || || || || ||||| 
Sbjct: 580 ggagattgggtgaactgcggtttatgtggtgaatgggctcactttggttgcgacagacga 521

                                 
Query: 562 caagggctgggcactttcaagg 583
           ||||| || |||||||||||||
Sbjct: 520 caaggactaggcactttcaagg 499



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                            
Query: 581 aggattacgcgaagacagatgggttggaatacatctgcccccattgtag 629
           |||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 420 aggattacgctaagacagatggtttggaatacatctgcccccactgtag 372
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>gb|AC130802.36| Medicago truncatula clone mth2-28b21, complete sequence
          Length = 123626

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                         
Query: 508    tgggtgaactgtggtttatgcggcgaatgggctcatttcggctgtgatagacggcaagg 566
              ||||||||||||||| | || || || ||||||||||| || |||||||| ||||||||
Sbjct: 116884 tgggtgaactgtggtatgtgtggtgagtgggctcattttggttgtgataggcggcaagg 116942
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>gb|AC183502.5| Medicago truncatula clone mth2-75g17, complete sequence
          Length = 121928

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 253   aatgcaaaacgccttgatctctataacttgtacaaagaggtg 294
             |||| |||||||||||||||||| ||||| || |||||||||
Sbjct: 45858 aatggaaaacgccttgatctctacaacttatataaagaggtg 45899



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                         
Query: 488   acagtagcgctcctggagattgggtgaactgtggtttatgcggcgaatgggctcatttcg 547
             ||||||| ||| |||| ||||||||||| |||||  |||| || || ||||| || ||||
Sbjct: 46642 acagtagtgctgctggggattgggtgaattgtggcatatgtggtgagtgggcccacttcg 46701

                             
Query: 548   gctgtgatagacggca 563
             ||||||| ||| ||||
Sbjct: 46702 gctgtgacagaaggca 46717



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                         
Query: 319   ggcaatggtataaactggaagggccaagtcttttcaaagatgcgaaaccataccgtaaca 378
             |||||||| || ||||||||||| ||| |||||||||| ||| ||||  | ||   ||||
Sbjct: 46009 ggcaatggcatcaactggaagggacaaatcttttcaaaaatgggaaattacacatcaaca 46068

                        
Query: 379   aatagaatgac 389
             |||||||||||
Sbjct: 46069 aatagaatgac 46079



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 436   gaatatgagctatcgcacgacgatgtggatggggagtgctgtttgctttgtcacag 491
             |||||||| ||| | || || ||||||||||| || ||||| ||||| ||||||||
Sbjct: 46365 gaatatgaactagctcatgatgatgtggatggagaatgctgcttgctgtgtcacag 46420
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>gb|AY271671.1| Gossypium barbadense fiber protein Fb21 mRNA, partial cds
          Length = 654

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 376 acaaatagaatgaccggtgtcgggaacacactgaaaagacactacgagac 425
           |||||||||||||| ||||| || ||||| ||||||||||| || |||||
Sbjct: 13  acaaatagaatgactggtgttggcaacactctgaaaagacattatgagac 62
to top
>emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome 3, BAC clone F7K15
          Length = 110800

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 322   aatggtataaactggaagggccaagtcttttcaaagatgcgaaaccataccgtaacaaat 381
             ||||| || ||||||||||| ||||| || ||||||||||| ||||| ||  | ||||| 
Sbjct: 46303 aatgggatcaactggaagggacaagttttctcaaagatgcgcaaccacacactcacaaac 46244

                     
Query: 382   agaatgac 389
             ||||||||
Sbjct: 46243 agaatgac 46236



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 508   tgggtgaactgtggtttatgcggcgaatgggctcatttcggctgtga 554
             |||||||||||||| | ||| || || |||||||||||||| |||||
Sbjct: 45934 tgggtgaactgtggatcatgtggagagtgggctcatttcggatgtga 45888
to top
>ref|XM_958243.1| Neurospora crassa OR74A hypothetical protein (NCU05345.1) partial
           mRNA
          Length = 888

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 152 aggaggactttttgaaggatgtgatgc 178
           |||||||||||||||||| ||||||||
Sbjct: 842 aggaggactttttgaaggctgtgatgc 868
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>ref|XM_325199.1| Neurospora crassa OR74A hypothetical protein (NCU05345.1) partial
           mRNA
          Length = 888

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 152 aggaggactttttgaaggatgtgatgc 178
           |||||||||||||||||| ||||||||
Sbjct: 842 aggaggactttttgaaggctgtgatgc 868
to top
>emb|BX284748.1|NCB15B24 Neurospora crassa DNA linkage group II BAC clone B15B24
          Length = 54958

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 152   aggaggactttttgaaggatgtgatgc 178
             |||||||||||||||||| ||||||||
Sbjct: 37336 aggaggactttttgaaggctgtgatgc 37362
to top
>gb|AC005213.1| Homo sapiens chromosome 5, BAC clone 84E9 (LBNL H120), complete
             sequence
          Length = 102431

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 172   gtgatgcaatttttaattcag 192
             |||||||||||||||||||||
Sbjct: 33487 gtgatgcaatttttaattcag 33467
to top
>emb|AL691497.8| Human DNA sequence from clone RP11-542C10 on chromosome 1 Contains
             putative novel transcript, complete sequence
          Length = 174648

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    cagcacctgcttctacagcag 39
             |||||||||||||||||||||
Sbjct: 65320 cagcacctgcttctacagcag 65300
to top
>gb|BC100494.1| Mus musculus cDNA clone IMAGE:30916454
          Length = 637

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 300 caggggtggcttttatgtggg 320
           |||||||||||||||||||||
Sbjct: 200 caggggtggcttttatgtggg 220
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>ref|XM_691475.1| PREDICTED: Danio rerio similar to myeloid/lymphoid or mixed-lineage
            leukemia 3 (LOC568162), mRNA
          Length = 10563

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 18   tcagcacctgcttctacagca 38
            |||||||||||||||||||||
Sbjct: 8328 tcagcacctgcttctacagca 8348
to top
>gb|BC050984.1| Mus musculus, clone IMAGE:6771240, mRNA
          Length = 629

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 300 caggggtggcttttatgtggg 320
           |||||||||||||||||||||
Sbjct: 179 caggggtggcttttatgtggg 199
to top
>gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome 5, complete sequence
          Length = 207846

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 300   caggggtggcttttatgtggg 320
             |||||||||||||||||||||
Sbjct: 75576 caggggtggcttttatgtggg 75596
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>emb|BX324233.5| Zebrafish DNA sequence from clone CH211-230L11 in linkage group 22,
             complete sequence
          Length = 157470

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 18    tcagcacctgcttctacagca 38
             |||||||||||||||||||||
Sbjct: 39841 tcagcacctgcttctacagca 39821
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>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07,
             complete sequence
          Length = 164477

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   gcacgacgatgtggatgggg 469
             ||||||||||||||||||||
Sbjct: 20289 gcacgacgatgtggatgggg 20270
to top
>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10,
             complete sequence
          Length = 140282

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   gcacgacgatgtggatgggg 469
             ||||||||||||||||||||
Sbjct: 88308 gcacgacgatgtggatgggg 88289
to top
>gb|AC125162.4| Mus musculus BAC clone RP24-421D9 from chromosome 8, complete sequence
          Length = 206643

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   gggtggcttttatgtgggca 322
             ||||||||||||||||||||
Sbjct: 56380 gggtggcttttatgtgggca 56361
to top
>emb|X97964.1|CJASD C.jejuni asd gene
          Length = 1679

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 19  cagcacctgcttctacagca 38
           ||||||||||||||||||||
Sbjct: 557 cagcacctgcttctacagca 538
to top
>gb|AF399011.1| Pseudomonas phage phiKZ, complete genome
          Length = 280334

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     tcagcacctgcttctacagc 37
              ||||||||||||||||||||
Sbjct: 246102 tcagcacctgcttctacagc 246083
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 450    gcacgacgatgtggatgggg 469
              ||||||||||||||||||||
Sbjct: 815866 gcacgacgatgtggatgggg 815847
to top
>gb|DQ163920.1| Bacteriophage SD1-M, complete genome
          Length = 281083

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     tcagcacctgcttctacagc 37
              ||||||||||||||||||||
Sbjct: 246851 tcagcacctgcttctacagc 246832
to top
>ref|XM_311163.2| Anopheles gambiae str. PEST ENSANGP00000001513 (ENSANGG00000001279),
            partial mRNA
          Length = 5934

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 22   cacctgcttctacagcagcg 41
            ||||||||||||||||||||
Sbjct: 4968 cacctgcttctacagcagcg 4987
to top
>gb|AC153599.6| Mus musculus 6 BAC RP23-227G6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 203926

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    atcctcttccaatgaagaaa 114
             ||||||||||||||||||||
Sbjct: 87249 atcctcttccaatgaagaaa 87230
to top
>emb|BX255920.4| Zebrafish DNA sequence from clone CH211-155K23 in linkage group 20,
             complete sequence
          Length = 92280

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 591   gaagacagatgggttggaatacat 614
             ||||||||||| ||||||||||||
Sbjct: 22544 gaagacagatgtgttggaatacat 22567
to top
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    cgactcgttcctcatggagg 224
              ||||||||||||||||||||
Sbjct: 236663 cgactcgttcctcatggagg 236682


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,043,052
Number of Sequences: 3902068
Number of extensions: 5043052
Number of successful extensions: 88680
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88525
Number of HSP's gapped (non-prelim): 152
length of query: 638
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 615
effective length of database: 17,143,297,704
effective search space: 10543128087960
effective search space used: 10543128087960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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