ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baaln21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PAO_ARATH (Q9FYC2) Pheophorbide a oxygenase, chloroplast precurs... 313 3e-86
2ZNF73_HUMAN (O43830) Zinc finger protein 73 (Zinc finger protein... 30 6.6
3CHER2_PSEAE (Q9I6V7) Chemotaxis protein methyltransferase 2 (EC ... 30 6.6
4CH602_VIBPA (Q87JG6) 60 kDa chaperonin 2 (Protein Cpn60 2) (groE... 30 6.6
5GFAT_MIMIV (Q7T6X6) Probable glucosamine--fructose-6-phosphate a... 29 8.6
6CH601_RHOPA (P60364) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE... 29 8.6
7CH60_ACIAD (Q6F8P6) 60 kDa chaperonin (Protein Cpn60) (groEL pro... 29 8.6
8EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXP... 29 8.6
9PLSX_PROMA (Q7VE56) Fatty acid/phospholipid synthesis protein plsX 29 8.6

>PAO_ARATH (Q9FYC2) Pheophorbide a oxygenase, chloroplast precursor (EC|
           1.-.-.-) (Pheide a oxygenase) (AtPaO) (Accelerated cell
           death 1) (Lethal leaf-spot 1 homolog) (Lls1)
          Length = 537

 Score =  313 bits (803), Expect(2) = 3e-86
 Identities = 141/164 (85%), Positives = 153/164 (93%)
 Frame = +2

Query: 89  LPKEFDDPAFSTVTIQRDLFYGYDTLMENVSDPSHIEFAHHKVTGRRDRAKPLPFKMESS 268
           LP +FD P FSTVTIQRDLFYGYDTLMENVSDPSHI+FAHHKVTGRRDRAKPLPFK+ESS
Sbjct: 218 LPDDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKVESS 277

Query: 269 GAWGYSGANTGNPRITATFEAPCYALNKIEIDTKLPIVGDQKWVIWICSFNIPMAPGKTR 448
           G WG+ GAN  +PRITA F APCY++NKIE+D KLPIVG+QKWVIWICSFNIPMAPGKTR
Sbjct: 278 GPWGFQGANDDSPRITAKFVAPCYSMNKIELDAKLPIVGNQKWVIWICSFNIPMAPGKTR 337

Query: 449 SIVCSARNFFQFTMPGKAWWQLVPRWYEHWTSNLVYDGDMIVLQ 580
           SIVCSARNFFQF++PG AWWQ+VPRWYEHWTSNLVYDGDMIVLQ
Sbjct: 338 SIVCSARNFFQFSVPGPAWWQVVPRWYEHWTSNLVYDGDMIVLQ 381



 Score = 25.0 bits (53), Expect(2) = 3e-86
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +3

Query: 21  GLLFVWPDE 47
           GLLFVWPDE
Sbjct: 196 GLLFVWPDE 204



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>ZNF73_HUMAN (O43830) Zinc finger protein 73 (Zinc finger protein 186) (hZNF2)|
          Length = 326

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 24/92 (26%), Positives = 32/92 (34%), Gaps = 21/92 (22%)
 Frame = +1

Query: 265 KRRMGIFRGKYR*PSHHCN-----------FRGPLLCTEQDRDRH*ITH----------C 381
           K  +G   GKY      CN            R P  C + D  +H  TH          C
Sbjct: 7   KVHIGQTFGKYNEYEKACNNLAIIVQGITQVRQPTCCRKSDFSKHQQTHTGEKPHECVEC 66

Query: 382 GRSEMGDMDLLLQHSHGPRENSFDCLQRSKLF 477
            +  +   DL++QH     E  + C    KLF
Sbjct: 67  EKPSISKSDLMIQHKMPTEEKPYACNCCEKLF 98



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>CHER2_PSEAE (Q9I6V7) Chemotaxis protein methyltransferase 2 (EC 2.1.1.80)|
          Length = 280

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 14/77 (18%)
 Frame = -3

Query: 247 QRLGSISSPSDLVVSKFYVRGIRDVLHQGVIPIEEV-----PLDR---------HRGEGR 110
           + LGS   P  +V S     G+ D   QGV P+E +     PL +         + G+ R
Sbjct: 135 EALGSFDPPVKIVASDIDT-GVLDCARQGVYPLERLEQMPAPLKKRFFLRGTGPNAGKAR 193

Query: 109 VIELFRQHWRFGRLGLV 59
           V+E  RQ   F ++ L+
Sbjct: 194 VVEELRQLVEFRQINLL 210



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>CH602_VIBPA (Q87JG6) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)|
          Length = 532

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = -3

Query: 340 IARGLESCSDARVTGICP*ISPCAA*FHFERQRLGSISSPSDLVVSKFYVRGIRDVLHQG 161
           + RG++  ++A V  +     PC+        ++GSIS+ SD  + +     +  V   G
Sbjct: 116 LKRGIDKATEAAVEKLREMSKPCSD--KESITQVGSISANSDRAIGEIIAEAMEKVGRNG 173

Query: 160 VIPIEE 143
           VI +EE
Sbjct: 174 VITVEE 179



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>GFAT_MIMIV (Q7T6X6) Probable glucosamine--fructose-6-phosphate|
           aminotransferase [isomerizing] (EC 2.6.1.16)
           (Hexosephosphate aminotransferase)
           (D-fructose-6-phosphate amidotransferase) (GFAT)
          Length = 605

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 455 VCSARNFFQFTMPGKAWWQLVPRWYEHWTSNLVYD 559
           +  ++  +Q    GK    L P  Y+HWT   +YD
Sbjct: 228 IIKSQQHYQMISMGKIVMDLTPSPYKHWTQREIYD 262



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>CH601_RHOPA (P60364) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 547

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = -3

Query: 340 IARGLESCSDARVTGICP*ISPCAA*FHFERQRLGSISSPSDLVVSKFYVRGIRDVLHQG 161
           + RG+E    A V  I     P A+    E  ++G+IS+  D  + K   + ++ V ++G
Sbjct: 116 LKRGIEIAVAAVVKDIQKRAKPVAS--SAEIAQVGTISANGDAPIGKMIAQAMQKVGNEG 173

Query: 160 VIPIEE 143
           VI +EE
Sbjct: 174 VITVEE 179



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>CH60_ACIAD (Q6F8P6) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 544

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -3

Query: 247 QRLGSISSPSDLVVSKFYVRGIRDVLHQGVIPIEE 143
           +++GSIS+ SD  V K   + +  V  +GVI +EE
Sbjct: 145 EQVGSISANSDETVGKLIAQAMEKVGKEGVITVEE 179



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>EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXPA21) (At-EXP21)|
           (AtEx21) (Ath-ExpAlpha-1.20)
          Length = 256

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 32/130 (24%)
 Frame = +2

Query: 287 GANTGNPRITATFEAP-----CYALNKIEIDTKLPIVGDQKWVIWICSFNIPMAPGKTRS 451
           G  +G+ +ITAT   P     CY  NK   D  LP+       I I      M P + R 
Sbjct: 103 GCLSGSIKITATDLCPPGSAWCYLPNK-HFDLSLPMF------IKIAQVKAKMVPVRYRR 155

Query: 452 IVCSARNFFQFTMPGK---------------------------AWWQLVPRWYEHWTSNL 550
           + C+     +F + G                            AW  +   W ++WT+N+
Sbjct: 156 VPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNV 215

Query: 551 VYDGDMIVLQ 580
              G  + L+
Sbjct: 216 NLTGQSVSLR 225



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>PLSX_PROMA (Q7VE56) Fatty acid/phospholipid synthesis protein plsX|
          Length = 436

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = -3

Query: 517 DKLPPCLSWHGKLEKVSSAAD 455
           D+LP C+ + G++EK+ SAAD
Sbjct: 122 DRLPLCIKFVGEIEKIHSAAD 142


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,980,575
Number of Sequences: 219361
Number of extensions: 2082370
Number of successful extensions: 5755
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5755
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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