ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baaln17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK100651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 375 e-101
2ref|XM_470005.1| Oryza sativa (japonica cultivar-group), mRNA 367 2e-98
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 319 3e-84
4gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genom... 319 3e-84
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 319 3e-84
6gb|AC133218.3| Oryza sativa (japonica cultivar-group) chromosome... 133 4e-28
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 133 4e-28
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 133 4e-28
9emb|BX823289.1|CNS0A7D6 Arabidopsis thaliana Full-length cDNA Co... 101 1e-18
10ref|NM_111267.3| Arabidopsis thaliana ATP binding / protein bind... 94 3e-16
11gb|BT010388.1| Arabidopsis thaliana At3g03960 mRNA, complete cds 94 3e-16
12gb|AF370490.1|AF370490 Arabidopsis thaliana putative T-complex p... 94 3e-16
13gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC... 90 5e-15
14dbj|AP004491.1| Lotus japonicus genomic DNA, chromosome 1, clone... 80 5e-12
15ref|XM_783013.1| PREDICTED: Strongylocentrotus purpuratus simila... 64 3e-07
16gb|AY393846.1| Gallus gallus chaperonin subunit 8 theta mRNA, co... 50 0.005
17ref|NM_001004389.1| Gallus gallus chaperonin containing TCP1, su... 50 0.005
18ref|XM_385795.1| Gibberella zeae PH-1 chromosome 3 conserved hyp... 46 0.071
19ref|NM_112896.2| Arabidopsis thaliana ATTCP-1; ATP binding / pro... 40 4.4
20gb|AC100751.6| Mus musculus chromosome 18, clone RP23-249P18, co... 40 4.4
21tpg|BK005598.1| TPA: TPA_exp: Homo sapiens NSP (NSP) gene, compl... 40 4.4
22emb|BX823612.1|CNS0A4WG Arabidopsis thaliana Full-length cDNA Co... 40 4.4
23dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 40 4.4
24gb|AC007963.7|AC007963 Homo sapiens chromosome 17, clone CTD-201... 40 4.4
25dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 4.4
26dbj|D11351.1|ATHTCP1H A. thaliana mRNA for t-complex polypeptide... 40 4.4
27dbj|D11352.1| Arabidopsis thaliana DNA for CCT alpha/TCP-1, comp... 40 4.4
28gb|AY389884.1| Uncultured archaeon clone NBFF33 putative thermos... 40 4.4
29gb|BT002052.1| Arabidopsis thaliana t-complex polypeptide 1 homo... 40 4.4
30gb|BT021103.1| Arabidopsis thaliana At3g20050 gene, complete cds 40 4.4
31dbj|D29672.1|PYWHSP Pyrococcus sp. KOD1 gene for heat-shock prot... 40 4.4
32dbj|AB001083.1| Thermococcus sp. DNA for chaperonin beta subunit... 40 4.4
33dbj|AB001081.2| Thermococcus sp. DNA for chaperonin beta subunit... 40 4.4

>dbj|AK100651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D11, full
           insert sequence
          Length = 2070

 Score =  375 bits (189), Expect = e-101
 Identities = 296/332 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcccttggccccaacggaatgaataagatggncattaatcatctagacaagctctttatc 60
           ||||| ||||||||||||||||||||||||| |||||| ||||| |||||||||||| ||
Sbjct: 241 tccctcggccccaacggaatgaataagatggtcattaaccatctcgacaagctctttgtc 300

                                                                       
Query: 61  acgaatgatgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctc 120
           ||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||| ||
Sbjct: 301 acgaacgatgctgcaacaattgtgaatgagctcgaggtccagcaccctgctgctaagatc 360

                                                                       
Query: 121 ctggtgctcgctgccagagcccaacaggaggagatcggggatggagctaacctcaccata 180
           ||||| || |||| ||| || || |||||||| ||||| |||||||||||||||||||||
Sbjct: 361 ctggtactagctggcagggctcagcaggaggaaatcggtgatggagctaacctcaccata 420

                                                                       
Query: 181 tctttcgcgggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatcca 240
           ||||| || ||||||||||| |||||||| |||||||| |||||||||||  ||||||||
Sbjct: 421 tcttttgctggtgaactgcttgagaaggccgaggagcttatcaggatggggttgcatcca 480

                                                                       
Query: 241 agtgagatcatcattgggtataccaaggccattaataagacgcttgagattttggaggat 300
           ||||||||||||||||| || ||||||||||||||||||||  ||||||| ||||| |||
Sbjct: 481 agtgagatcatcattggctacaccaaggccattaataagactgttgagatcttggaagat 540

                                           
Query: 301 ctagttgagaaaggctcggaaaatatggatgt 332
           || || |||||||| || ||||| ||||||||
Sbjct: 541 cttgtggagaaaggttcagaaaacatggatgt 572



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>ref|XM_470005.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2070

 Score =  367 bits (185), Expect = 2e-98
 Identities = 295/332 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcccttggccccaacggaatgaataagatggncattaatcatctagacaagctctttatc 60
           ||||| ||||||||||||||||||||||||| |||||| ||||| |||||||||||| ||
Sbjct: 241 tccctcggccccaacggaatgaataagatggtcattaaccatctcgacaagctctttgtc 300

                                                                       
Query: 61  acgaatgatgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctc 120
           ||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||| ||
Sbjct: 301 acgaacgatgctgcaacaattgtgaatgagctcgaggtccagcaccctgctgctaagatc 360

                                                                       
Query: 121 ctggtgctcgctgccagagcccaacaggaggagatcggggatggagctaacctcaccata 180
           ||||| || |||| ||| || || |||||||| ||||| |||||||||||||||||||||
Sbjct: 361 ctggtactagctggcagggctcagcaggaggaaatcggtgatggagctaacctcaccata 420

                                                                       
Query: 181 tctttcgcgggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatcca 240
           ||||| || ||||||||||| |||||||| |||||||| |||||||||||  ||||||||
Sbjct: 421 tcttttgctggtgaactgcttgagaaggccgaggagcttatcaggatggggttgcatcca 480

                                                                       
Query: 241 agtgagatcatcattgggtataccaaggccattaataagacgcttgagattttggaggat 300
           ||||||||||||||||| || ||||||||||||||||||||  ||||||| ||||| |||
Sbjct: 481 agtgagatcatcattggctacaccaaggccattaataagactgttgagatcttggaagat 540

                                           
Query: 301 ctagttgagaaaggctcggaaaatatggatgt 332
           || || |||||||| || || || ||||||||
Sbjct: 541 cttgtggagaaaggttcagagaacatggatgt 572



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  319 bits (161), Expect = 3e-84
 Identities = 238/264 (90%)
 Strand = Plus / Plus

                                                                            
Query: 16       ggaatgaataagatggncattaatcatctagacaagctctttatcacgaatgatgctgca 75
                |||||||||||||||| |||||| ||||| |||||||||||| ||||||| |||||||||
Sbjct: 33289650 ggaatgaataagatggtcattaaccatctcgacaagctctttgtcacgaacgatgctgca 33289709

                                                                            
Query: 76       acaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctcgctgcc 135
                ||||| ||||| ||||| |||||||||||||||||||||||| ||||||| || |||| |
Sbjct: 33289710 acaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggtactagctggc 33289769

                                                                            
Query: 136      agagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcgggtgaa 195
                || || || |||||||| ||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 33289770 agggctcagcaggaggaaatcggtgatggagctaacctcaccatatcttttgctggtgaa 33289829

                                                                            
Query: 196      ctgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatcatcatt 255
                ||||| |||||||| |||||||| |||||||||||  |||||||||||||||||||||||
Sbjct: 33289830 ctgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgagatcatcatt 33289889

                                        
Query: 256      gggtataccaaggccattaataag 279
                || || ||||||||||||||||||
Sbjct: 33289890 ggctacaccaaggccattaataag 33289913



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>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete
             sequence
          Length = 122815

 Score =  319 bits (161), Expect = 3e-84
 Identities = 238/264 (90%)
 Strand = Plus / Plus

                                                                         
Query: 16    ggaatgaataagatggncattaatcatctagacaagctctttatcacgaatgatgctgca 75
             |||||||||||||||| |||||| ||||| |||||||||||| ||||||| |||||||||
Sbjct: 46166 ggaatgaataagatggtcattaaccatctcgacaagctctttgtcacgaacgatgctgca 46225

                                                                         
Query: 76    acaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctcgctgcc 135
             ||||| ||||| ||||| |||||||||||||||||||||||| ||||||| || |||| |
Sbjct: 46226 acaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggtactagctggc 46285

                                                                         
Query: 136   agagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcgggtgaa 195
             || || || |||||||| ||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 46286 agggctcagcaggaggaaatcggtgatggagctaacctcaccatatcttttgctggtgaa 46345

                                                                         
Query: 196   ctgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatcatcatt 255
             ||||| |||||||| |||||||| |||||||||||  |||||||||||||||||||||||
Sbjct: 46346 ctgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgagatcatcatt 46405

                                     
Query: 256   gggtataccaaggccattaataag 279
             || || ||||||||||||||||||
Sbjct: 46406 ggctacaccaaggccattaataag 46429



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  319 bits (161), Expect = 3e-84
 Identities = 238/264 (90%)
 Strand = Plus / Plus

                                                                            
Query: 16       ggaatgaataagatggncattaatcatctagacaagctctttatcacgaatgatgctgca 75
                |||||||||||||||| |||||| ||||| |||||||||||| ||||||| |||||||||
Sbjct: 33380160 ggaatgaataagatggtcattaaccatctcgacaagctctttgtcacgaacgatgctgca 33380219

                                                                            
Query: 76       acaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctcgctgcc 135
                ||||| ||||| ||||| |||||||||||||||||||||||| ||||||| || |||| |
Sbjct: 33380220 acaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggtactagctggc 33380279

                                                                            
Query: 136      agagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcgggtgaa 195
                || || || |||||||| ||||| |||||||||||||||||||||||||| || ||||||
Sbjct: 33380280 agggctcagcaggaggaaatcggtgatggagctaacctcaccatatcttttgctggtgaa 33380339

                                                                            
Query: 196      ctgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatcatcatt 255
                ||||| |||||||| |||||||| |||||||||||  |||||||||||||||||||||||
Sbjct: 33380340 ctgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgagatcatcatt 33380399

                                        
Query: 256      gggtataccaaggccattaataag 279
                || || ||||||||||||||||||
Sbjct: 33380400 ggctacaccaaggccattaataag 33380423



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>gb|AC133218.3| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0549G05, complete sequence
          Length = 147182

 Score =  133 bits (67), Expect = 4e-28
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                         
Query: 20    tgaataagatggncattaatcatctagacaagctctttatcacgaatgatgctgcaacaa 79
             |||||||||||| |||| | ||||| |||||||||||| |||| || | |||||||||||
Sbjct: 63668 tgaataagatggtcattgaccatctcgacaagctctttgtcacaaacgctgctgcaacaa 63727

                                                           
Query: 80    tcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggt 125
             | |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 63728 ttgtgaacgagcttgaggtccagcaccctgctgctaagatcctggt 63773



 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 87/102 (85%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                         
Query: 149   aggagatcggggatggagctaacctcaccatatctttcgcgggt-gaactgctcgagaag 207
             ||||||| || |||||||||||||||||||||||||| || | | |  ||||| ||||||
Sbjct: 63788 aggagattggtgatggagctaacctcaccatatcttttgctgatggggctgcttgagaag 63847

                                                       
Query: 208   gctgaggagctcatcaggatgggactgcatccaagtgagatc 249
             ||| |||||||  ||||||||||  |||||||||||| ||||
Sbjct: 63848 gctaaggagcttgtcaggatggggttgcatccaagtgtgatc 63889



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  133 bits (67), Expect = 4e-28
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                            
Query: 20       tgaataagatggncattaatcatctagacaagctctttatcacgaatgatgctgcaacaa 79
                |||||||||||| |||| | ||||| |||||||||||| |||| || | |||||||||||
Sbjct: 20942056 tgaataagatggtcattgaccatctcgacaagctctttgtcacaaacgctgctgcaacaa 20942115

                                                              
Query: 80       tcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggt 125
                | |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 20942116 ttgtgaacgagcttgaggtccagcaccctgctgctaagatcctggt 20942161



 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 87/102 (85%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                            
Query: 149      aggagatcggggatggagctaacctcaccatatctttcgcgggt-gaactgctcgagaag 207
                ||||||| || |||||||||||||||||||||||||| || | | |  ||||| ||||||
Sbjct: 20942176 aggagattggtgatggagctaacctcaccatatcttttgctgatggggctgcttgagaag 20942235

                                                          
Query: 208      gctgaggagctcatcaggatgggactgcatccaagtgagatc 249
                ||| |||||||  ||||||||||  |||||||||||| ||||
Sbjct: 20942236 gctaaggagcttgtcaggatggggttgcatccaagtgtgatc 20942277



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  133 bits (67), Expect = 4e-28
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                            
Query: 20       tgaataagatggncattaatcatctagacaagctctttatcacgaatgatgctgcaacaa 79
                |||||||||||| |||| | ||||| |||||||||||| |||| || | |||||||||||
Sbjct: 21252291 tgaataagatggtcattgaccatctcgacaagctctttgtcacaaacgctgctgcaacaa 21252350

                                                              
Query: 80       tcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggt 125
                | |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 21252351 ttgtgaacgagcttgaggtccagcaccctgctgctaagatcctggt 21252396



 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 87/102 (85%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                            
Query: 149      aggagatcggggatggagctaacctcaccatatctttcgcgggt-gaactgctcgagaag 207
                ||||||| || |||||||||||||||||||||||||| || | | |  ||||| ||||||
Sbjct: 21252411 aggagattggtgatggagctaacctcaccatatcttttgctgatggggctgcttgagaag 21252470

                                                          
Query: 208      gctgaggagctcatcaggatgggactgcatccaagtgagatc 249
                ||| |||||||  ||||||||||  |||||||||||| ||||
Sbjct: 21252471 gctaaggagcttgtcaggatggggttgcatccaagtgtgatc 21252512



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>emb|BX823289.1|CNS0A7D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS1ZF10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2049

 Score =  101 bits (51), Expect = 1e-18
 Identities = 194/242 (80%)
 Strand = Plus / Plus

                                                                       
Query: 10  cccaacggaatgaataagatggncattaatcatctagacaagctctttatcacgaatgat 69
           ||||| ||||||||||||||||  || |||||| | ||||| || ||| |||| ||||| 
Sbjct: 290 cccaatggaatgaataagatggttatcaatcatttggacaaactgtttgtcacaaatgac 349

                                                                       
Query: 70  gctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctc 129
           ||||| || || ||||| ||||| ||| | |||||||| |||||||| || |||||  | 
Sbjct: 350 gctgctactatagtgaatgagctcgagattcagcacccggctgctaaacttctggtttta 409

                                                                       
Query: 130 gctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcg 189
           ||||| |  || || || || || ||||| ||||||||||| || || || || || || 
Sbjct: 410 gctgctaaggctcagcaagaagaaatcggagatggagctaatctgacaatctcctttgct 469

                                                                       
Query: 190 ggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatc 249
           |||||||| ||  | || ||||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 470 ggtgaacttcttcaaaacgctgaggagcttatcaggatgggacttcatccgagtgagatc 529

             
Query: 250 at 251
           ||
Sbjct: 530 at 531



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>ref|NM_111267.3| Arabidopsis thaliana ATP binding / protein binding AT3G03960 mRNA,
           complete cds
          Length = 2054

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 193/242 (79%)
 Strand = Plus / Plus

                                                                       
Query: 10  cccaacggaatgaataagatggncattaatcatctagacaagctctttatcacgaatgat 69
           ||||| ||||||||||| ||||  || |||||| | ||||| || ||| |||| ||||| 
Sbjct: 290 cccaatggaatgaataaaatggttatcaatcatttggacaaactgtttgtcacaaatgac 349

                                                                       
Query: 70  gctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctc 129
           ||||| || || ||||| ||||| ||| | |||||||| |||||||| || |||||  | 
Sbjct: 350 gctgctactatagtgaatgagctcgagattcagcacccggctgctaaacttctggtttta 409

                                                                       
Query: 130 gctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcg 189
           ||||| |  || || || || || ||||| ||||||||||| || || || || || || 
Sbjct: 410 gctgctaaggctcagcaagaagaaatcggagatggagctaatctgacaatctcctttgct 469

                                                                       
Query: 190 ggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatc 249
           |||||||| ||  | || ||||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 470 ggtgaacttcttcaaaacgctgaggagcttatcaggatgggacttcatccgagtgagatc 529

             
Query: 250 at 251
           ||
Sbjct: 530 at 531



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>gb|BT010388.1| Arabidopsis thaliana At3g03960 mRNA, complete cds
          Length = 1650

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 193/242 (79%)
 Strand = Plus / Plus

                                                                       
Query: 10  cccaacggaatgaataagatggncattaatcatctagacaagctctttatcacgaatgat 69
           ||||| ||||||||||| ||||  || |||||| | ||||| || ||| |||| ||||| 
Sbjct: 145 cccaatggaatgaataaaatggttatcaatcatttggacaaactgtttgtcacaaatgac 204

                                                                       
Query: 70  gctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctc 129
           ||||| || || ||||| ||||| ||| | |||||||| |||||||| || |||||  | 
Sbjct: 205 gctgctactatagtgaatgagctcgagattcagcacccggctgctaaacttctggtttta 264

                                                                       
Query: 130 gctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcg 189
           ||||| |  || || || || || ||||| ||||||||||| || || || || || || 
Sbjct: 265 gctgctaaggctcagcaagaagaaatcggagatggagctaatctgacaatctcctttgct 324

                                                                       
Query: 190 ggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatc 249
           |||||||| ||  | || ||||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 325 ggtgaacttcttcaaaacgctgaggagcttatcaggatgggacttcatccgagtgagatc 384

             
Query: 250 at 251
           ||
Sbjct: 385 at 386



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>gb|AF370490.1|AF370490 Arabidopsis thaliana putative T-complex protein 1, theta subunit;
           TCP-1-Theta (T11I18.7) mRNA, complete cds
          Length = 1932

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 193/242 (79%)
 Strand = Plus / Plus

                                                                       
Query: 10  cccaacggaatgaataagatggncattaatcatctagacaagctctttatcacgaatgat 69
           ||||| ||||||||||| ||||  || |||||| | ||||| || ||| |||| ||||| 
Sbjct: 285 cccaatggaatgaataaaatggttatcaatcatttggacaaactgtttgtcacaaatgac 344

                                                                       
Query: 70  gctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctc 129
           ||||| || || ||||| ||||| ||| | |||||||| |||||||| || |||||  | 
Sbjct: 345 gctgctactatagtgaatgagctcgagattcagcacccggctgctaaacttctggtttta 404

                                                                       
Query: 130 gctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcg 189
           ||||| |  || || || || || ||||| ||||||||||| || || || || || || 
Sbjct: 405 gctgctaaggctcagcaagaagaaatcggagatggagctaatctgacaatctcctttgct 464

                                                                       
Query: 190 ggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatc 249
           |||||||| ||  | || ||||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 465 ggtgaacttcttcaaaacgctgaggagcttatcaggatgggacttcatccgagtgagatc 524

             
Query: 250 at 251
           ||
Sbjct: 525 at 526



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>gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC T11I18 genomic sequence,
             complete sequence
          Length = 63654

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 188/236 (79%)
 Strand = Plus / Plus

                                                                         
Query: 16    ggaatgaataagatggncattaatcatctagacaagctctttatcacgaatgatgctgca 75
             ||||||||||| ||||  || |||||| | ||||| || ||| |||| ||||| ||||| 
Sbjct: 21435 ggaatgaataaaatggttatcaatcatttggacaaactgtttgtcacaaatgacgctgct 21494

                                                                         
Query: 76    acaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctcgctgcc 135
             || || ||||| ||||| ||| | |||||||| |||||||| || |||||  | ||||| 
Sbjct: 21495 actatagtgaatgagctcgagattcagcacccggctgctaaacttctggttttagctgct 21554

                                                                         
Query: 136   agagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcgggtgaa 195
             |  || || || || || ||||| ||||||||||| || || || || || || ||||||
Sbjct: 21555 aaggctcagcaagaagaaatcggagatggagctaatctgacaatctcctttgctggtgaa 21614

                                                                     
Query: 196   ctgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatcat 251
             || ||  | || ||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct: 21615 cttcttcaaaacgctgaggagcttatcaggatgggacttcatccgagtgagatcat 21670



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>dbj|AP004491.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17G08, TM0023,
             complete sequence
          Length = 91039

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                         
Query: 19    atgaataagatggncattaatcatctagacaagctctttatcacgaatgatgctgcaaca 78
             |||||||||||||  ||||||||| | |||||||| ||| |||||||||| || || |||
Sbjct: 77620 atgaataagatggttattaatcatttggacaagctttttgtcacgaatgacgccgctaca 77561

                                                
Query: 79    atcgtgaacgagcttgaggtccagcaccctgctgc 113
             || ||||| |||||||| || ||||| ||||||||
Sbjct: 77560 attgtgaatgagcttgaagttcagcatcctgctgc 77526



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 208   gctgaggagctcatcaggatgggactgcatccaagtgagatcatcattgggtataccaa 266
             ||||||||||| |||||||||||  |||| || || |||||||||| ||| ||||||||
Sbjct: 77431 gctgaggagcttatcaggatgggtttgcacccgagcgagatcatcagtggatataccaa 77373



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>ref|XM_783013.1| PREDICTED: Strongylocentrotus purpuratus similar to chaperonin
           containing TCP1, subunit 8 (theta) (LOC583086), partial
           mRNA
          Length = 1407

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 82/99 (82%)
 Strand = Plus / Plus

                                                                       
Query: 19  atgaataagatggncattaatcatctagacaagctctttatcacgaatgatgctgcaaca 78
           ||||||||||||| ||| || ||  |||| ||||||||| |||| ||||| |||||||| 
Sbjct: 112 atgaataagatggtcatcaaccacatagagaagctctttgtcacaaatgacgctgcaacc 171

                                                  
Query: 79  atcgtgaacgagcttgaggtccagcaccctgctgctaag 117
           ||  | || ||| | ||||| ||||||||||||||||||
Sbjct: 172 attctcaaagagttggaggttcagcaccctgctgctaag 210



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>gb|AY393846.1| Gallus gallus chaperonin subunit 8 theta mRNA, complete cds
          Length = 1647

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                       
Query: 10  cccaacggaatgaataagatggncattaatcatctagacaagctctttatcacgaatgat 69
           ||||| |||||||| || ||||  || |||||||| || ||||| ||| | || ||||||
Sbjct: 145 cccaatggaatgaacaaaatggttatcaatcatctggagaagctttttgttacaaatgat 204

                                                       
Query: 70  gctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgc 113
           ||||| || ||| |||  ||| | ||||||||||| ||||||||
Sbjct: 205 gctgctactatcttgagagagttggaggtccagcatcctgctgc 248



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>ref|NM_001004389.1| Gallus gallus chaperonin containing TCP1, subunit 8 (theta) (CCT8),
           mRNA
          Length = 1647

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                       
Query: 10  cccaacggaatgaataagatggncattaatcatctagacaagctctttatcacgaatgat 69
           ||||| |||||||| || ||||  || |||||||| || ||||| ||| | || ||||||
Sbjct: 145 cccaatggaatgaacaaaatggttatcaatcatctggagaagctttttgttacaaatgat 204

                                                       
Query: 70  gctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgc 113
           ||||| || ||| |||  ||| | ||||||||||| ||||||||
Sbjct: 205 gctgctactatcttgagagagttggaggtccagcatcctgctgc 248



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>ref|XM_385795.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein
            (FG05619.1) partial mRNA
          Length = 5052

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 196  ctgctcgagaaggctgaggagctcatc 222
            ||||||||||||||||| |||||||||
Sbjct: 3939 ctgctcgagaaggctgatgagctcatc 3913



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>ref|NM_112896.2| Arabidopsis thaliana ATTCP-1; ATP binding / protein binding
           AT3G20050 (ATTCP-1) mRNA, complete cds
          Length = 2063

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  gaggtccagcaccctgctgctaag 117
           |||||| |||||||||||||||||
Sbjct: 340 gaggtcgagcaccctgctgctaag 363



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>gb|AC100751.6| Mus musculus chromosome 18, clone RP23-249P18, complete sequence
          Length = 253910

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   agctcatcaggatgggactg 234
             ||||||||||||||||||||
Sbjct: 86843 agctcatcaggatgggactg 86824



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>tpg|BK005598.1| TPA: TPA_exp: Homo sapiens NSP (NSP) gene, complete cds, alternatively
             spliced
          Length = 227735

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   ctgcatccaagtgagatcat 251
             ||||||||||||||||||||
Sbjct: 38581 ctgcatccaagtgagatcat 38600



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>emb|BX823612.1|CNS0A4WG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS56ZH05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1961

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  gaggtccagcaccctgctgctaag 117
           |||||| |||||||||||||||||
Sbjct: 324 gaggtcgagcaccctgctgctaag 347



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>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 98      tccagcaccctgctgctaag 117
               ||||||||||||||||||||
Sbjct: 2085050 tccagcaccctgctgctaag 2085069



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>gb|AC007963.7|AC007963 Homo sapiens chromosome 17, clone CTD-2010G8, complete sequence
          Length = 133488

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   ctgcatccaagtgagatcat 251
             ||||||||||||||||||||
Sbjct: 88636 ctgcatccaagtgagatcat 88655



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>dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MAL21
          Length = 83253

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 94    gaggtccagcaccctgctgctaag 117
             |||||| |||||||||||||||||
Sbjct: 21891 gaggtcgagcaccctgctgctaag 21868



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>dbj|D11351.1|ATHTCP1H A. thaliana mRNA for t-complex polypeptide 1 homologue, complete
           cds
          Length = 2024

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  gaggtccagcaccctgctgctaag 117
           |||||| |||||||||||||||||
Sbjct: 339 gaggtcgagcaccctgctgctaag 362



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>dbj|D11352.1| Arabidopsis thaliana DNA for CCT alpha/TCP-1, complete cds
          Length = 6533

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 94   gaggtccagcaccctgctgctaag 117
            |||||| |||||||||||||||||
Sbjct: 2285 gaggtcgagcaccctgctgctaag 2308



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>gb|AY389884.1| Uncultured archaeon clone NBFF33 putative thermosome subunit gene,
           partial cds
          Length = 700

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 94  gaggtccagcaccctgctgctaagctcctggt 125
           ||||| ||||||||||| || |||||||||||
Sbjct: 259 gaggttcagcaccctgccgcgaagctcctggt 290



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>gb|BT002052.1| Arabidopsis thaliana t-complex polypeptide 1 homologue (At3g20050)
           mRNA, complete cds
          Length = 2022

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  gaggtccagcaccctgctgctaag 117
           |||||| |||||||||||||||||
Sbjct: 338 gaggtcgagcaccctgctgctaag 361



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>gb|BT021103.1| Arabidopsis thaliana At3g20050 gene, complete cds
          Length = 1718

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  gaggtccagcaccctgctgctaag 117
           |||||| |||||||||||||||||
Sbjct: 256 gaggtcgagcaccctgctgctaag 279



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>dbj|D29672.1|PYWHSP Pyrococcus sp. KOD1 gene for heat-shock protein, complete cds
          Length = 1838

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  tccagcaccctgctgctaag 117
           ||||||||||||||||||||
Sbjct: 319 tccagcaccctgctgctaag 338



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>dbj|AB001083.1| Thermococcus sp. DNA for chaperonin beta subunit, complete cds
          Length = 2030

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  tccagcaccctgctgctaag 117
           ||||||||||||||||||||
Sbjct: 428 tccagcaccctgctgctaag 447



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>dbj|AB001081.2| Thermococcus sp. DNA for chaperonin beta subunit, complete cds
          Length = 1980

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  tccagcaccctgctgctaag 117
           ||||||||||||||||||||
Sbjct: 368 tccagcaccctgctgctaag 387


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,329,797
Number of Sequences: 3902068
Number of extensions: 2329797
Number of successful extensions: 38829
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38701
Number of HSP's gapped (non-prelim): 127
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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