ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baaln14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK059305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F12, full insert sequence Length = 1322 Score = 285 bits (144), Expect = 8e-74 Identities = 433/528 (82%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 77 gggaagctcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctc 136 |||||||| || ||||||||||||||||| |||||||||||||| ||| |||||| ||| Sbjct: 207 gggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtcaggctg 266 Query: 137 ctcctcgaccgcggctacaccgtccatggcaccgtccgggacaccgctgacccaaataaa 196 ||||||| |||||||||||| |||| | |||| ||||||||||| |||||||||| ||| Sbjct: 267 ctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgacccaaagaaa 326 Query: 197 acattgcacctgcgtgctcttgatggagcaaacgataggctgcacctgttcaacgcaaac 256 ||| | ||||||||||| || |||||||| ||||| || || || ||||| | ||||| Sbjct: 327 acactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaagcaaat 386 Query: 257 ttgttagaggaaggctctttcgacgctgccattgacggttgcgagtgtgtgttccatgcg 316 || | || || ||||||||||| ||||| | | ||||| || ||||| |||||| || Sbjct: 387 ctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttccatacg 446 Query: 317 gcttctccagttttcttcgctgccaaagatcccaaggctgagttacttgattcagcagtc 376 |||||||| ||| | | || |||||||||||||||||||||||||| | |||||| Sbjct: 447 gcttctcccttttaccacaatgttaaagatcccaaggctgagttacttgaccctgcagtc 506 Query: 377 agtggaacgcttaatgttttgcgttcctgcaagaaggcttctgtcagaagagtggtcata 436 | ||||| ||||||||| | | ||||||||||| ||||| | |||||||| || | Sbjct: 507 aaaggaacccttaatgttctaggctcctgcaagaaagcttccattagaagagttatcgtg 566 Query: 437 acatcgtctatggcttctgttatcgtcaacgggaaaccaagaacccctgatgtaattgtt 496 ||||| || |||||| ||||| | ||| |||||||||||||| ||||||||| ||||| Sbjct: 567 acatcatccatggctgctgttgcctacaatgggaaaccaagaactcctgatgtagttgtt 626 Query: 497 gatgaaacatggttttcactaccagagctttgtaaaaagaatcagcaatggtataccttg 556 ||||| |||||||||||| | |||||| ||||| ||||| |||||||||||||| || Sbjct: 627 gatgagacatggttttcagttccagagatttgtgaaaagcatcagcaatggtatgttctg 686 Query: 557 tctaagacccttgcagaggaggctgcttgggaagttctctaaagataa 604 || |||||||| |||||||||||||||| ||||||| || |||||||| Sbjct: 687 tccaagaccctagcagaggaggctgctt-ggaagttttcaaaagataa 733
>ref|NM_193168.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1359 Score = 278 bits (140), Expect = 2e-71 Identities = 432/528 (81%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 77 gggaagctcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctc 136 |||||||| || ||||||||||||||||| |||||||||||||| ||| |||||| ||| Sbjct: 382 gggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtcaggctg 441 Query: 137 ctcctcgaccgcggctacaccgtccatggcaccgtccgggacaccgctgacccaaataaa 196 ||||||| |||||||||||| |||| | |||| ||||||||||| |||||||||| ||| Sbjct: 442 ctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgacccaaagaaa 501 Query: 197 acattgcacctgcgtgctcttgatggagcaaacgataggctgcacctgttcaacgcaaac 256 ||| | ||||||||||| || |||||||| ||||| || || || ||||| | ||||| Sbjct: 502 acactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaagcaaat 561 Query: 257 ttgttagaggaaggctctttcgacgctgccattgacggttgcgagtgtgtgttccatgcg 316 || | || || ||||||||||| ||||| | | ||||| || ||||| |||||| || Sbjct: 562 ctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttccatacg 621 Query: 317 gcttctccagttttcttcgctgccaaagatcccaaggctgagttacttgattcagcagtc 376 |||||||| ||| | | || |||||||| ||||||||||||||||| | |||||| Sbjct: 622 gcttctcccttttaccacaatgttaaagatcctaaggctgagttacttgaccctgcagtc 681 Query: 377 agtggaacgcttaatgttttgcgttcctgcaagaaggcttctgtcagaagagtggtcata 436 | ||||| ||||||||| | | ||||||||||| ||||| | |||||||| || | Sbjct: 682 aaaggaacccttaatgttctaggctcctgcaagaaagcttccattagaagagttatcgtg 741 Query: 437 acatcgtctatggcttctgttatcgtcaacgggaaaccaagaacccctgatgtaattgtt 496 ||||| || |||||| ||||| | ||| |||||||||||||| ||||||||| ||||| Sbjct: 742 acatcatccatggctgctgttgcctacaatgggaaaccaagaactcctgatgtagttgtt 801 Query: 497 gatgaaacatggttttcactaccagagctttgtaaaaagaatcagcaatggtataccttg 556 ||||| |||||||||||| | |||||| ||||| ||||| |||||||||||||| || Sbjct: 802 gatgagacatggttttcagttccagagatttgtgaaaagcatcagcaatggtatgttctg 861 Query: 557 tctaagacccttgcagaggaggctgcttgggaagttctctaaagataa 604 || |||||||| |||||||||||||||| ||||||| || |||||||| Sbjct: 862 tccaagaccctagcagaggaggctgctt-ggaagttttcaaaagataa 908
>dbj|AK068824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162A03, full insert sequence Length = 1334 Score = 278 bits (140), Expect = 2e-71 Identities = 432/528 (81%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 77 gggaagctcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctc 136 |||||||| || ||||||||||||||||| |||||||||||||| ||| |||||| ||| Sbjct: 195 gggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtcaggctg 254 Query: 137 ctcctcgaccgcggctacaccgtccatggcaccgtccgggacaccgctgacccaaataaa 196 ||||||| |||||||||||| |||| | |||| ||||||||||| |||||||||| ||| Sbjct: 255 ctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgacccaaagaaa 314 Query: 197 acattgcacctgcgtgctcttgatggagcaaacgataggctgcacctgttcaacgcaaac 256 ||| | ||||||||||| || |||||||| ||||| || || || ||||| | ||||| Sbjct: 315 acactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaagcaaat 374 Query: 257 ttgttagaggaaggctctttcgacgctgccattgacggttgcgagtgtgtgttccatgcg 316 || | || || ||||||||||| ||||| | | ||||| || ||||| |||||| || Sbjct: 375 ctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttccatacg 434 Query: 317 gcttctccagttttcttcgctgccaaagatcccaaggctgagttacttgattcagcagtc 376 |||||||| ||| | | || |||||||| ||||||||||||||||| | |||||| Sbjct: 435 gcttctcccttttaccacaatgttaaagatcctaaggctgagttacttgaccctgcagtc 494 Query: 377 agtggaacgcttaatgttttgcgttcctgcaagaaggcttctgtcagaagagtggtcata 436 | ||||| ||||||||| | | ||||||||||| ||||| | |||||||| || | Sbjct: 495 aaaggaacccttaatgttctaggctcctgcaagaaagcttccattagaagagttatcgtg 554 Query: 437 acatcgtctatggcttctgttatcgtcaacgggaaaccaagaacccctgatgtaattgtt 496 ||||| || |||||| ||||| | ||| |||||||||||||| ||||||||| ||||| Sbjct: 555 acatcatccatggctgctgttgcctacaatgggaaaccaagaactcctgatgtagttgtt 614 Query: 497 gatgaaacatggttttcactaccagagctttgtaaaaagaatcagcaatggtataccttg 556 ||||| |||||||||||| | |||||| ||||| ||||| |||||||||||||| || Sbjct: 615 gatgagacatggttttcagttccagagatttgtgaaaagcatcagcaatggtatgttctg 674 Query: 557 tctaagacccttgcagaggaggctgcttgggaagttctctaaagataa 604 || |||||||| |||||||||||||||| ||||||| || |||||||| Sbjct: 675 tccaagaccctagcagaggaggctgctt-ggaagttttcaaaagataa 721
>gb|AY106077.1| Zea mays PCO149989 mRNA sequence Length = 1282 Score = 157 bits (79), Expect = 5e-35 Identities = 145/167 (86%) Strand = Plus / Plus Query: 75 cggggaagctcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagc 134 |||||||| | || |||||||||||||| || |||||||||||||||||||| |||| || Sbjct: 142 cggggaaggtggtttgcgtcaccggcgcatcagggtacatcgcgtcctggattgtcaggc 201 Query: 135 tcctcctcgaccgcggctacaccgtccatggcaccgtccgggacaccgctgacccaaata 194 |||| |||||||||||||||||||||| | |||||| || ||||||||||||||||| | Sbjct: 202 tcctactcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgacccaaaga 261 Query: 195 aaacattgcacctgcgtgctcttgatggagcaaacgataggctgcac 241 |||||||||||||| ||| | ||||| || || |||||||||||| Sbjct: 262 aaacattgcacctgactgcgttggatggtgctaaggataggctgcac 308 Score = 63.9 bits (32), Expect = 6e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 536 aatcagcaatggtataccttgtctaagacccttgcagaggaggctgcttgggaagttctc 595 |||||||||||||||| ||||| ||||| || |||||||||||||||| |||||||||| Sbjct: 603 aatcagcaatggtatattttgtccaagacgctggcagaggaggctgctt-ggaagttctc 661
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 109 bits (55), Expect = 1e-20 Identities = 157/191 (82%) Strand = Plus / Plus Query: 351 aggctgagttacttgattcagcagtcagtggaacgcttaatgttttgcgttcctgcaaga 410 |||||||||||||||| | ||||||| ||||| ||||||||| | | |||||||||| Sbjct: 19007406 aggctgagttacttgaccctgcagtcaaaggaacccttaatgttctaggctcctgcaaga 19007465 Query: 411 aggcttctgtcagaagagtggtcataacatcgtctatggcttctgttatcgtcaacggga 470 | ||||| | |||||||| || | ||||| || |||||| ||||| | ||| |||| Sbjct: 19007466 aagcttccattagaagagttatcgtgacatcatccatggctgctgttgcctacaatggga 19007525 Query: 471 aaccaagaacccctgatgtaattgttgatgaaacatggttttcactaccagagctttgta 530 |||||||||| ||||||||| |||||||||| |||||||||||| | |||||| ||||| Sbjct: 19007526 aaccaagaactcctgatgtagttgttgatgagacatggttttcagttccagagatttgtg 19007585 Query: 531 aaaagaatcag 541 ||||| ||||| Sbjct: 19007586 aaaagcatcag 19007596 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 77 gggaagctcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctc 136 |||||||| || ||||||||||||||||| |||||||||||||| ||| |||||| ||| Sbjct: 19006024 gggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtcaggctg 19006083 Query: 137 ctcctcgaccgcggctacaccgtccatggcaccgtccgggacacc 181 ||||||| |||||||||||| |||| | |||| ||||||||||| Sbjct: 19006084 ctcctcgcccgcggctacacggtccgcgccaccatccgggacacc 19006128 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 134 ctcctcctcgaccgcggctacaccgtccatggcaccgtc 172 ||||||||||||||||||||||||||||| | ||||||| Sbjct: 35424322 ctcctcctcgaccgcggctacaccgtccacgccaccgtc 35424360 Score = 54.0 bits (27), Expect = 6e-04 Identities = 58/67 (86%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 538 tcagcaatggtataccttgtctaagacccttgcagaggaggctgcttgggaagttctcta 597 ||||||||||||| |||| |||||||| |||||||||||||||| ||||||| || | Sbjct: 19008599 tcagcaatggtatgttctgtccaagaccctagcagaggaggctgctt-ggaagttttcaa 19008657 Query: 598 aagataa 604 ||||||| Sbjct: 19008658 aagataa 19008664 Score = 54.0 bits (27), Expect = 6e-04 Identities = 114/143 (79%) Strand = Plus / Plus Query: 182 gctgacccaaataaaacattgcacctgcgtgctcttgatggagcaaacgataggctgcac 241 ||||||||||| |||||| | ||||||||||| || |||||||| ||||| || || || Sbjct: 19006522 gctgacccaaagaaaacactacacctgcgtgccctggatggagccaacgaaagactccat 19006581 Query: 242 ctgttcaacgcaaacttgttagaggaaggctctttcgacgctgccattgacggttgcgag 301 ||||| | ||||| || | || || ||||||||||| ||||| | | ||||| || Sbjct: 19006582 ttgttcgaagcaaatctgctggaagagggctctttcgatgctgcggtcaatggttgtgat 19006641 Query: 302 tgtgtgttccatgcggcttctcc 324 ||||| |||||| |||||||||| Sbjct: 19006642 tgtgttttccatacggcttctcc 19006664
>dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1129H01 Length = 101104 Score = 109 bits (55), Expect = 1e-20 Identities = 157/191 (82%) Strand = Plus / Plus Query: 351 aggctgagttacttgattcagcagtcagtggaacgcttaatgttttgcgttcctgcaaga 410 |||||||||||||||| | ||||||| ||||| ||||||||| | | |||||||||| Sbjct: 64449 aggctgagttacttgaccctgcagtcaaaggaacccttaatgttctaggctcctgcaaga 64508 Query: 411 aggcttctgtcagaagagtggtcataacatcgtctatggcttctgttatcgtcaacggga 470 | ||||| | |||||||| || | ||||| || |||||| ||||| | ||| |||| Sbjct: 64509 aagcttccattagaagagttatcgtgacatcatccatggctgctgttgcctacaatggga 64568 Query: 471 aaccaagaacccctgatgtaattgttgatgaaacatggttttcactaccagagctttgta 530 |||||||||| ||||||||| |||||||||| |||||||||||| | |||||| ||||| Sbjct: 64569 aaccaagaactcctgatgtagttgttgatgagacatggttttcagttccagagatttgtg 64628 Query: 531 aaaagaatcag 541 ||||| ||||| Sbjct: 64629 aaaagcatcag 64639 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 77 gggaagctcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctc 136 |||||||| || ||||||||||||||||| |||||||||||||| ||| |||||| ||| Sbjct: 63067 gggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtcaggctg 63126 Query: 137 ctcctcgaccgcggctacaccgtccatggcaccgtccgggacacc 181 ||||||| |||||||||||| |||| | |||| ||||||||||| Sbjct: 63127 ctcctcgcccgcggctacacggtccgcgccaccatccgggacacc 63171 Score = 54.0 bits (27), Expect = 6e-04 Identities = 58/67 (86%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 538 tcagcaatggtataccttgtctaagacccttgcagaggaggctgcttgggaagttctcta 597 ||||||||||||| |||| |||||||| |||||||||||||||| ||||||| || | Sbjct: 65642 tcagcaatggtatgttctgtccaagaccctagcagaggaggctgctt-ggaagttttcaa 65700 Query: 598 aagataa 604 ||||||| Sbjct: 65701 aagataa 65707 Score = 54.0 bits (27), Expect = 6e-04 Identities = 114/143 (79%) Strand = Plus / Plus Query: 182 gctgacccaaataaaacattgcacctgcgtgctcttgatggagcaaacgataggctgcac 241 ||||||||||| |||||| | ||||||||||| || |||||||| ||||| || || || Sbjct: 63565 gctgacccaaagaaaacactacacctgcgtgccctggatggagccaacgaaagactccat 63624 Query: 242 ctgttcaacgcaaacttgttagaggaaggctctttcgacgctgccattgacggttgcgag 301 ||||| | ||||| || | || || ||||||||||| ||||| | | ||||| || Sbjct: 63625 ttgttcgaagcaaatctgctggaagagggctctttcgatgctgcggtcaatggttgtgat 63684 Query: 302 tgtgtgttccatgcggcttctcc 324 ||||| |||||| |||||||||| Sbjct: 63685 tgtgttttccatacggcttctcc 63707
>ref|XM_464328.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1335 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 84 tcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcg 143 ||||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 113 tcgtctgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctcctcctcg 172 Query: 144 accgcggctacaccgtcc 161 |||||||||| |||||| Sbjct: 173 cccgcggctacgccgtcc 190
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 84 tcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcg 143 ||||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 4497223 tcgtctgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctcctcctcg 4497282 Query: 144 accgcggctacaccgtcc 161 |||||||||| |||||| Sbjct: 4497283 cccgcggctacgccgtcc 4497300
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 84 tcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcg 143 ||||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 32602 tcgtctgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctcctcctcg 32661 Query: 144 accgcggctacaccgtcc 161 |||||||||| |||||| Sbjct: 32662 cccgcggctacgccgtcc 32679
>dbj|AK070746.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064M01, full insert sequence Length = 1335 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 84 tcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcg 143 ||||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 113 tcgtctgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctcctcctcg 172 Query: 144 accgcggctacaccgtcc 161 |||||||||| |||||| Sbjct: 173 cccgcggctacgccgtcc 190
>gb|AY109696.1| Zea mays CL11616_3 mRNA sequence Length = 986 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 92 gtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgcggc 151 ||||||| ||| || | ||||||||||||||||||||| | ||||||||||||||| ||| Sbjct: 755 gtcaccgacgcatcagcgtacatcgcgtcctggatcgttaggctcctcctcgaccgtggc 696 Query: 152 tacaccgtcc 161 |||||||||| Sbjct: 695 tacaccgtcc 686
>gb|AY108351.1| Zea mays PCO122024 mRNA sequence Length = 1233 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 106 cgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgcggctacaccgtccatgg 165 |||||||||||| || ||| ||||||||||||||||| ||| |||||||||||||| || Sbjct: 157 cgggtacatcgcctcgtggctcgtcaagctcctcctctcccgtggctacaccgtccacgg 216 Query: 166 caccgtccg 174 ||||||||| Sbjct: 217 caccgtccg 225
>emb|X79566.1|EGCCR E.gunnii CCR mRNA Length = 1210 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcga 144 |||||||||||||||||| ||||| |||||| |||||||| |||||||| |||||||| Sbjct: 81 cgtctgcgtcaccggcgccggcgggttcatcgcctcctggattgtcaagcttctcctcga 140 Query: 145 ccgcggctacaccgt 159 || ||||||||||| Sbjct: 141 gcgaggctacaccgt 155
>gb|AF033851.1| Vigna radiata aldehyde reductase mRNA, complete cds Length = 1267 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 86 gtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgac 145 ||||| ||||||||||| ||||| |||||||| |||||| |||||||| | || ||||| Sbjct: 59 gtctgtgtcaccggcgcttccggttacatcgcttcctggctcgtcaagtttcttctcgaa 118 Query: 146 cgcggctacaccgt 159 |||||||||||||| Sbjct: 119 cgcggctacaccgt 132
>emb|AJ234689.1|HVU234689 Hordeum vulgare genomic DNA fragment; clone MWG0973.uni Length = 218 Score = 73.8 bits (37), Expect = 6e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 81 agctcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcc 140 ||||||||||||||||||||| ||| | ||||| |||||| ||||| ||||||| Sbjct: 205 agctcgtctgcgtcaccggcggcagcggcttcatcggctcctggctcgtccgcctcctcc 146 Query: 141 tcgaccgcggctacaccgtccatggcaccgtcc 173 |||||||||||||||||||||| | |||||||| Sbjct: 145 tcgaccgcggctacaccgtccacgccaccgtcc 113
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 83 ctcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctc 142 ||||| |||||||||||||| ||||| ||||| || ||| ||||||||||||||||| Sbjct: 35494 ctcgtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctc 35553 Query: 143 gaccgcggctacaccgtccatggcaccgtccg 174 |||||||||| ||||||| | ||||||||| Sbjct: 35554 tcccgcggctacgccgtccacgccaccgtccg 35585 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 84 tcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcg 143 |||| |||||||||||||| ||||| | ||| || ||| ||||| ||||||||||| Sbjct: 16253 tcgtgtgcgtcaccggcgccggcgggttcgtcggctcgtggctcgtcgagctcctcctct 16312 Query: 144 accgcggctacaccgtccatggcaccgtccg 174 |||||||||| ||||||||| ||| ||||| Sbjct: 16313 cccgcggctacgccgtccatgccacggtccg 16343 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgc 148 |||||||||||||| ||||| ||||| || ||| ||||||||||||||||| ||| Sbjct: 26413 tgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctctcccgt 26472 Query: 149 ggctacaccgt 159 |||||| |||| Sbjct: 26473 ggctacgccgt 26483 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgc 148 |||||||||||||| ||||| ||||| || ||| ||||||| ||||||||| | || Sbjct: 21828 tgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaatctcctcctctcctgc 21887 Query: 149 ggctacaccgtccatggcaccgtccg 174 |||||| | |||| ||||||||||| Sbjct: 21888 ggctacttcttccacggcaccgtccg 21913 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 126 tcgtcaagctcctcctcgaccgcggctacaccgtcca 162 ||||||||||||||||| ||| |||||| ||||||| Sbjct: 42187 tcgtcaagctcctcctctcccgtggctacgccgtcca 42223
>ref|XM_481219.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1420 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcga 144 |||||||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||| Sbjct: 210 cgtctgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctcga 269
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcga 144 |||||||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||| Sbjct: 10712448 cgtctgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctcga 10712507 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 ||||| ||||||||| |||||||||||||||| ||| |||| ||||| Sbjct: 21506161 tgcgtgaccggcgcggccgggtacatcgcgtcgtggctcgtgaagct 21506115
>gb|AY149607.1| Hordeum vulgare cultivar Orthega cinnamoyl CoA reductase mRNA, complete cds Length = 1279 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgc 148 |||||||||||||| |||||||||||||||| ||| |||||||||| ||||| || | Sbjct: 152 tgcgtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagctgctcctggagagg 211 Query: 149 ggctacaccgtc 160 |||||||||||| Sbjct: 212 ggctacaccgtc 223
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcga 144 |||||||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||| Sbjct: 9580 cgtctgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctcga 9639
>dbj|AK106439.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D08, full insert sequence Length = 1420 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcga 144 |||||||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||| Sbjct: 210 cgtctgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctcga 269
>ref|XM_450149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 69.9 bits (35), Expect = 9e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgc 148 |||||||||||||| ||||| ||||||||| ||| ||||||||| ||||||||| Sbjct: 276 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctcgagaag 335 Query: 149 ggctacaccgtccatggcaccgtccgg 175 ||||||||||| | ||||||||||||| Sbjct: 336 ggctacaccgtgcgtggcaccgtccgg 362
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 69.9 bits (35), Expect = 9e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgc 148 |||||||||||||| ||||| ||||||||| ||| ||||||||| ||||||||| Sbjct: 2033010 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctcgagaag 2032951 Query: 149 ggctacaccgtccatggcaccgtccgg 175 ||||||||||| | ||||||||||||| Sbjct: 2032950 ggctacaccgtgcgtggcaccgtccgg 2032924 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 92 gtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgcggc 151 ||||||||||| |||||||||||||||| ||| |||||||||| || || || | ||| Sbjct: 15024546 gtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagctgctgctggagaggggc 15024487 Query: 152 tacaccgt 159 |||||||| Sbjct: 15024486 tacaccgt 15024479
>gb|AF297877.1|AF297877 Eucalyptus saligna cinnamoyl-CoA reductase (ccr) gene, complete cds Length = 3016 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcga 144 |||||||||||||||||| ||| | |||||| |||||||| |||||||| |||||||| Sbjct: 130 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctcga 189 Query: 145 ccgcggctacaccgt 159 || ||||||||||| Sbjct: 190 gcgaggctacaccgt 204
>gb|AY098581.1|AY098581S1 Eucalyptus globulus cinnamoyl CoA reductase (CCR) gene, exons 1 and 2 Length = 771 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcga 144 |||||||||||||||||| ||| | |||||| |||||||| |||||||| |||||||| Sbjct: 36 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctcga 95 Query: 145 ccgcggctacaccgt 159 || ||||||||||| Sbjct: 96 gcgaggctacaccgt 110
>dbj|AP005680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1352_A10 Length = 111655 Score = 69.9 bits (35), Expect = 9e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgc 148 |||||||||||||| ||||| ||||||||| ||| ||||||||| ||||||||| Sbjct: 68377 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctcgagaag 68318 Query: 149 ggctacaccgtccatggcaccgtccgg 175 ||||||||||| | ||||||||||||| Sbjct: 68317 ggctacaccgtgcgtggcaccgtccgg 68291
>dbj|AK100234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051O20, full insert sequence Length = 1612 Score = 69.9 bits (35), Expect = 9e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgc 148 |||||||||||||| ||||| ||||||||| ||| ||||||||| ||||||||| Sbjct: 276 tgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctcgagaag 335 Query: 149 ggctacaccgtccatggcaccgtccgg 175 ||||||||||| | ||||||||||||| Sbjct: 336 ggctacaccgtgcgtggcaccgtccgg 362
>gb|AY656821.1| Eucalyptus globulus voucher UTAS1580 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3213 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcga 144 |||||||||||||||||| ||| | |||||| |||||||| |||||||| |||||||| Sbjct: 101 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagctgctcctcga 160 Query: 145 ccgcggctacaccgt 159 || ||||||||||| Sbjct: 161 gcgaggctacaccgt 175
>gb|AY656820.1| Eucalyptus globulus voucher UTAS1042 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3230 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcga 144 |||||||||||||||||| ||| | |||||| |||||||| |||||||| |||||||| Sbjct: 80 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagctgctcctcga 139 Query: 145 ccgcggctacaccgt 159 || ||||||||||| Sbjct: 140 gcgaggctacaccgt 154
>gb|AY656819.1| Eucalyptus globulus voucher UTAS1270 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3051 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcga 144 |||||||||||||||||| ||| | |||||| |||||||| |||||||| |||||||| Sbjct: 73 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctcga 132 Query: 145 ccgcggctacaccgt 159 || ||||||||||| Sbjct: 133 gcgaggctacaccgt 147
>gb|AY656818.1| Eucalyptus globulus voucher UTAS1180 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3074 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcga 144 |||||||||||||||||| ||| | |||||| |||||||| |||||||| |||||||| Sbjct: 70 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagctgctcctcga 129 Query: 145 ccgcggctacaccgt 159 || ||||||||||| Sbjct: 130 gcgaggctacaccgt 144
>gb|DQ142643.1| Eucommia ulmoides cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1243 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgc 148 ||||||||||||||||| || | ||| || ||||||||||||||| || | ||| | ||| Sbjct: 79 tgcgtcaccggcgcgtctggtttcatagcctcctggatcgtcaagttcttgctccaacgc 138 Query: 149 ggctacaccgtcc 161 ||||||||||||| Sbjct: 139 ggctacaccgtcc 151
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 63.9 bits (32), Expect = 6e-07 Identities = 55/62 (88%), Gaps = 3/62 (4%) Strand = Plus / Minus Query: 116 gcgtcctggatcgtcaagctcctcctcgaccgcggct---acaccgtccatggcaccgtc 172 ||||| ||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 24706351 gcgtcgtggctcgtcaagctcctcctctcccgcggctgctacaccgtccatggcaccgtc 24706292 Query: 173 cg 174 || Sbjct: 24706291 cg 24706290
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 63.9 bits (32), Expect = 6e-07 Identities = 55/62 (88%), Gaps = 3/62 (4%) Strand = Plus / Minus Query: 116 gcgtcctggatcgtcaagctcctcctcgaccgcggct---acaccgtccatggcaccgtc 172 ||||| ||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 40032 gcgtcgtggctcgtcaagctcctcctctcccgcggctgctacaccgtccatggcaccgtc 39973 Query: 173 cg 174 || Sbjct: 39972 cg 39971
>dbj|AK073641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052J24, full insert sequence Length = 1232 Score = 63.9 bits (32), Expect = 6e-07 Identities = 55/62 (88%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 116 gcgtcctggatcgtcaagctcctcctcgaccgcggct---acaccgtccatggcaccgtc 172 ||||| ||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 85 gcgtcgtggctcgtcaagctcctcctctcccgcggctgctacaccgtccatggcaccgtc 144 Query: 173 cg 174 || Sbjct: 145 cg 146
>dbj|AK063958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-G03, full insert sequence Length = 1737 Score = 63.9 bits (32), Expect = 6e-07 Identities = 55/62 (88%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 116 gcgtcctggatcgtcaagctcctcctcgaccgcggct---acaccgtccatggcaccgtc 172 ||||| ||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 532 gcgtcgtggctcgtcaagctcctcctctcccgcggctgctacaccgtccatggcaccgtc 591 Query: 173 cg 174 || Sbjct: 592 cg 593
>ref|NM_190422.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 981 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 134 ctcctcctcgaccgcggctacaccgtccatggcaccgtc 172 ||||||||||||||||||||||||||||| | ||||||| Sbjct: 82 ctcctcctcgaccgcggctacaccgtccacgccaccgtc 120
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 134 ctcctcctcgaccgcggctacaccgtccatggcaccgtc 172 ||||||||||||||||||||||||||||| | ||||||| Sbjct: 48271 ctcctcctcgaccgcggctacaccgtccacgccaccgtc 48309
>emb|X97433.1|EGCCR1GEN E.gunnii CCR1 gene Length = 3202 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgc 148 |||||||||||||| ||| | |||||| |||||||| |||||||| |||||||| || Sbjct: 231 tgcgtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctcgagcga 290 Query: 149 ggctacaccgt 159 ||||||||||| Sbjct: 291 ggctacaccgt 301
>ref|NM_104019.2| Arabidopsis thaliana alcohol dehydrogenase AT1G51410 mRNA, complete cds Length = 978 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 243 tgttcaacgcaaacttgttagaggaaggctctttcga 279 ||||||| |||||||||||||| |||||||||||||| Sbjct: 182 tgttcaaagcaaacttgttagaagaaggctctttcga 218
>gb|AY523973.1|AY523972S2 Azospirillum brasilense plasmid 90 MDa, partial sequence Length = 67651 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 140 ctcgaccgcggctacaccgtccatggcac 168 ||||||||||||||||||||||||||||| Sbjct: 9462 ctcgaccgcggctacaccgtccatggcac 9434
>emb|AJ440712.1|LAL440712 Linum album mRNA for cinnamoyl-CoA reductase (ccr gene) Length = 1488 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcct 141 |||||||||||||||||| ||| | |||||| |||||||||||||| |||||||| Sbjct: 159 cgtctgcgtcaccggcgccggcggcttcatcgcctcctggatcgtcaaactcctcct 215
>gb|DQ056491.1| Arabidopsis thaliana putative cinnamyl-alcohol dehydrogenase (At1g51410) mRNA, complete cds Length = 978 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 243 tgttcaacgcaaacttgttagaggaaggctctttcga 279 ||||||| |||||||||||||| |||||||||||||| Sbjct: 182 tgttcaaagcaaacttgttagaagaaggctctttcga 218
>gb|AC024261.6|AC024261 Arabidopsis thaliana chromosome 1 BAC F5D21 genomic sequence, complete sequence Length = 92652 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 243 tgttcaacgcaaacttgttagaggaaggctctttcga 279 ||||||| |||||||||||||| |||||||||||||| Sbjct: 80461 tgttcaaagcaaacttgttagaagaaggctctttcga 80425
>gb|AY656817.1| Eucalyptus cordata voucher UTAS1498 cinnamoyl CoA reductase (CCR) gene, complete cds Length = 3042 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/75 (82%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcga 144 ||| || ||||||||||| ||| | |||||| |||||||| |||||||| |||||| | Sbjct: 77 cgtstgygtcaccggcgccggcggcttcatcgcctcctggattgtcaagcttctcctcka 136 Query: 145 ccgcggctacaccgt 159 || ||||||||||| Sbjct: 137 gcgaggctacaccgt 151
>gb|AF278698.1| Lolium perenne cinnamoyl CoA reductase (CCR) mRNA, complete cds Length = 1207 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 92 gtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgcggc 151 ||||||||||| |||| ||||||||||| ||| |||||||||| ||||| || | ||| Sbjct: 58 gtcaccggcgctgccggatacatcgcgtcttggctcgtcaagctgctcctggagagaggc 117 Query: 152 tacaccgt 159 |||||||| Sbjct: 118 tacaccgt 125
>emb|AJ231134.1|SOF231134 Saccharum officinarum mRNA for cinnamoyl-CoA reductase Length = 1511 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcga 144 ||||||||||| ||| ||||||||||||| || ||| |||||||||| || ||||| Sbjct: 265 tgcgtcaccggtgcggccgggtacatcgcctcgtggctcgtcaagctgctgctcga 320
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0668D04 Length = 148848 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 92 gtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgcggc 151 ||||||||||| |||||||||||||||| ||| |||||||||| || || || | ||| Sbjct: 16189 gtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagctgctgctggagaggggc 16130 Query: 152 tacaccgt 159 |||||||| Sbjct: 16129 tacaccgt 16122
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701F11 Length = 154950 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 92 gtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgcggc 151 ||||||||||| |||||||||||||||| ||| |||||||||| || || || | ||| Sbjct: 93992 gtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagctgctgctggagaggggc 93933 Query: 152 tacaccgt 159 |||||||| Sbjct: 93932 tacaccgt 93925
>emb|X88797.1|EGRNACAD1 E.gunnii mRNA for cinnamyl alcohol dehydrogenase Length = 1225 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgc 148 ||||| ||||| ||||| | |||||||| || ||| |||||||||||||||| | ||| Sbjct: 103 tgcgtgaccggggcgtcgcgttacatcgcctcgtggctcgtcaagctcctcctgcagcgc 162 Query: 149 ggctacaccgtc 160 |||||||||||| Sbjct: 163 ggctacaccgtc 174
>dbj|AK107198.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-A12, full insert sequence Length = 1253 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 92 gtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgcggc 151 ||||||||||| |||||||||||||||| ||| |||||||||| || || || | ||| Sbjct: 125 gtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagctgctgctggagaggggc 184 Query: 152 tacaccgt 159 |||||||| Sbjct: 185 tacaccgt 192
>dbj|AK104860.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D11, full insert sequence Length = 1245 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 92 gtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 ||||||||||| |||||||||||||||| ||| |||||||||| Sbjct: 130 gtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagct 173
>dbj|AK067949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P15, full insert sequence Length = 1265 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 92 gtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 ||||||||||| |||||||||||||||| ||| |||||||||| Sbjct: 131 gtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagct 174
>gb|AF053084.1|AF053084 Malus domestica putative cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1262 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 77 gggaagctcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctc 136 |||||| |||| ||||||||||| ||||| || ||||| || || ||| |||| ||||| Sbjct: 31 gggaaggtcgtgtgcgtcaccggtgcgtctggatacattgcttcatggctcgttaagctt 90 Query: 137 ctcctcgaccgcggctacaccgtc 160 || ||| | ||||||||||||||| Sbjct: 91 cttctccagcgcggctacaccgtc 114
>ref|NM_100819.2| Arabidopsis thaliana alcohol dehydrogenase/ cinnamyl-alcohol dehydrogenase AT1G09480 mRNA, complete cds Length = 1110 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 86 gtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgac 145 |||||||||||||| || ||||| ||||| ||||| ||||| |||||||| | ||| | Sbjct: 163 gtctgcgtcaccggagcttccggttacatagcgtcttggattgtcaagcttttgctcctc 222 Query: 146 cgcggctacaccgtc 160 || |||||||||||| Sbjct: 223 cgtggctacaccgtc 237
>ref|XM_482628.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1423 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 ||||| ||||||||| |||||||||||||||| ||| |||| ||||| Sbjct: 254 tgcgtgaccggcgcggccgggtacatcgcgtcgtggctcgtgaagct 300
>ref|XM_507587.1| PREDICTED Oryza sativa (japonica cultivar-group), P0528B09.35-1 mRNA Length = 1439 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 ||||| ||||||||| |||||||||||||||| ||| |||| ||||| Sbjct: 255 tgcgtgaccggcgcggccgggtacatcgcgtcgtggctcgtgaagct 301
>ref|XM_507244.2| PREDICTED Oryza sativa (japonica cultivar-group), P0528B09.35-1 mRNA Length = 1441 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 ||||| ||||||||| |||||||||||||||| ||| |||| ||||| Sbjct: 255 tgcgtgaccggcgcggccgggtacatcgcgtcgtggctcgtgaagct 301
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 86 gtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgac 145 |||||||||||||| || ||||| ||||| ||||| ||||| |||||||| | ||| | Sbjct: 40160 gtctgcgtcaccggagcttccggttacatagcgtcttggattgtcaagcttttgctcctc 40219 Query: 146 cgcggctacaccgtc 160 || |||||||||||| Sbjct: 40220 cgtggctacaccgtc 40234 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 86 gtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 |||||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 48435 gtctgcgtaaccggagcttccggttacatagcgtcttggatcgtcaagct 48484
>dbj|AB218718.1| Prunus mume Pm15 mRNA for Cinnamyl alcohol dehydrogenase, complete cds Length = 1321 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 84 tcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcct 138 |||||||||||||||| |||||||| ||||| || || ||| |||| |||||||| Sbjct: 66 tcgtctgcgtcaccggtgcgtccggttacattgcttcatggctcgtgaagctcct 120
>gb|AY061889.1| Lolium perenne cinnamoyl-CoA reductase (CCR1) gene, complete cds Length = 5799 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 ||||| |||||||| |||||||||||||||| ||| |||||||||| Sbjct: 439 tgcgtgaccggcgccgccgggtacatcgcgtcgtggctcgtcaagct 485
>gb|AY061888.1| Lolium perenne cinnamoyl-CoA reductase (CCR1) mRNA, complete cds Length = 1395 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 ||||| |||||||| |||||||||||||||| ||| |||||||||| Sbjct: 228 tgcgtgaccggcgccgccgggtacatcgcgtcgtggctcgtcaagct 274
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 ||||| ||||||||| |||||||||||||||| ||| |||| ||||| Sbjct: 110156 tgcgtgaccggcgcggccgggtacatcgcgtcgtggctcgtgaagct 110110
>dbj|AK105870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A12, full insert sequence Length = 1439 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 ||||| ||||||||| |||||||||||||||| ||| |||| ||||| Sbjct: 255 tgcgtgaccggcgcggccgggtacatcgcgtcgtggctcgtgaagct 301
>dbj|AK105802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A12, full insert sequence Length = 1423 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 ||||| ||||||||| |||||||||||||||| ||| |||| ||||| Sbjct: 254 tgcgtgaccggcgcggccgggtacatcgcgtcgtggctcgtgaagct 300
>dbj|AK102061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082D10, full insert sequence Length = 1090 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 ||||| ||||||||| |||||||||||||||| ||| |||| ||||| Sbjct: 255 tgcgtgaccggcgcggccgggtacatcgcgtcgtggctcgtgaagct 301
>dbj|AK072872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143B20, full insert sequence Length = 1441 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 ||||| ||||||||| |||||||||||||||| ||| |||| ||||| Sbjct: 255 tgcgtgaccggcgcggccgggtacatcgcgtcgtggctcgtgaagct 301
>dbj|AK062287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E03, full insert sequence Length = 1272 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 84 tcgtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcg 143 |||| |||||||||||||| ||||| | ||| || ||| ||||| ||||||||||| Sbjct: 103 tcgtgtgcgtcaccggcgccggcgggttcgtcggctcgtggctcgtcgagctcctcctct 162 Query: 144 accgcggctacaccgtccatggcaccgtccg 174 |||||||||| ||||||||| ||| ||||| Sbjct: 163 cccgcggctacgccgtccatgccacggtccg 193
>ref|NM_001035935.1| Arabidopsis thaliana cinnamyl-alcohol dehydrogenase AT1G09500 transcript variant AT1G09500.3 mRNA, complete cds Length = 983 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 86 gtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 |||||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 80 gtctgcgtaaccggagcttccggttacatagcgtcttggatcgtcaagct 129
>ref|NM_100821.2| Arabidopsis thaliana alcohol dehydrogenase/ cinnamyl-alcohol dehydrogenase AT1G09500 transcript variant AT1G09500.1 mRNA, complete cds Length = 1150 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 86 gtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 |||||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 80 gtctgcgtaaccggagcttccggttacatagcgtcttggatcgtcaagct 129
>ref|NM_179294.1| Arabidopsis thaliana cinnamyl-alcohol dehydrogenase AT1G09500 transcript variant AT1G09500.2 mRNA, complete cds Length = 1616 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 86 gtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 |||||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 134 gtctgcgtaaccggagcttccggttacatagcgtcttggatcgtcaagct 183
>gb|BT000479.1| Arabidopsis thaliana putative cinnamyl alcohol dehydrogenase (At1g09500/F14J9_16) mRNA, complete cds Length = 978 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 86 gtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 |||||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 22 gtctgcgtaaccggagcttccggttacatagcgtcttggatcgtcaagct 71
>gb|AF462838.1|AF462838 Arabidopsis thaliana At1g09500/F14J9_16 mRNA, complete cds Length = 1111 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 86 gtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 |||||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 80 gtctgcgtaaccggagcttccggttacatagcgtcttggatcgtcaagct 129
>gb|AY058139.1| Arabidopsis thaliana At1g09500/F14J9_16 mRNA, complete cds Length = 1533 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 86 gtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 |||||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 77 gtctgcgtaaccggagcttccggttacatagcgtcttggatcgtcaagct 126
>gb|AF424567.1|AF424567 Arabidopsis thaliana At1g09500/F14J9_16 mRNA, complete cds Length = 1092 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 86 gtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 |||||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 80 gtctgcgtaaccggagcttccggttacatagcgtcttggatcgtcaagct 129
>emb|BX818550.1|CNS0AAW1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL85ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1050 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 86 gtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagct 135 |||||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 64 gtctgcgtaaccggagcttccggttacatagcgtcttggatcgtcaagct 113
>emb|X98083.1|ZMCINNRED Z.mays mRNA for cinnamoyl-CoA reductase Length = 1398 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgc 117 ||||||||||||||| ||||||||||||| Sbjct: 172 tgcgtcaccggcgcggccgggtacatcgc 200
>gb|DQ001168.1| Acacia mangium x Acacia auriculiformis cinnamoyl-CoA reductase mRNA, complete cds Length = 1305 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 ctcctcctcgaccgcggctacaccgtccatggcaccgtcc 173 ||||||||||| || ||||||||| |||||| |||||||| Sbjct: 146 ctcctcctcgatcgtggctacaccatccatgccaccgtcc 185
>emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chromosome 21, complete sequence Length = 158069 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 563 acccttgcagaggaggctgcttg 585 ||||||||||||||||||||||| Sbjct: 52871 acccttgcagaggaggctgcttg 52849
>emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chromosome 21, complete sequence Length = 152296 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 563 acccttgcagaggaggctgcttg 585 ||||||||||||||||||||||| Sbjct: 48013 acccttgcagaggaggctgcttg 48035
>gb|AY087161.1| Arabidopsis thaliana clone 32366 mRNA, complete sequence Length = 1132 Score = 46.1 bits (23), Expect = 0.13 Identities = 62/75 (82%) Strand = Plus / Plus Query: 86 gtctgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgac 145 |||||||| ||||| || ||||| ||||| ||||| ||||| |||||||| | ||| | Sbjct: 67 gtctgcgttaccggagcttccggctacatagcgtcttggattgtcaagcttttgctcctc 126 Query: 146 cgcggctacaccgtc 160 || |||||||||||| Sbjct: 127 cgtggctacaccgtc 141
>dbj|AK068648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159B10, full insert sequence Length = 1452 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgc 148 |||||||||||||| ||||| ||||| || ||| ||||||||||||||||| ||| Sbjct: 134 tgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctctcccgt 193 Query: 149 ggctacaccgt 159 |||||| |||| Sbjct: 194 ggctacgccgt 204
>dbj|AK062138.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F11, full insert sequence Length = 1270 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgc 148 |||||||||||||| ||||| ||||| || ||| ||||||||||||||||| ||| Sbjct: 133 tgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaagctcctcctctcccgt 192 Query: 149 ggctacaccgt 159 |||||| |||| Sbjct: 193 ggctacgccgt 203
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 136 cctcctcgaccgcggctacacc 157 |||||||||||||||||||||| Sbjct: 5215257 cctcctcgaccgcggctacacc 5215278
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 cgtcaccggcgcgtccgggtacatcg 116 ||||||||||||| |||||||||||| Sbjct: 4946629 cgtcaccggcgcgaccgggtacatcg 4946654
>gb|AY695813.1| Fragaria x ananassa dihydroflavonol 4-reductase (DFR) gene, complete cds Length = 2925 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 ctcctcgaccgcggctacaccgtcc 161 |||||||| |||||||||||||||| Sbjct: 1310 ctcctcgagcgcggctacaccgtcc 1334
>gb|BT013872.1| Lycopersicon esculentum clone 132852F, mRNA sequence Length = 1147 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 473 ccaagaacccctgatgtaattgttgatgaaacatggt 509 |||||||||||||| || | |||||||||||||||| Sbjct: 440 ccaagaacccctgaagtggtggttgatgaaacatggt 476
>emb|BX641014.1|HSM807189 Homo sapiens genomic DNA; cDNA DKFZp686I19109 (from clone DKFZp686I19109) Length = 9162 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 ctgcaagaaggcttctgtcag 423 ||||||||||||||||||||| Sbjct: 6242 ctgcaagaaggcttctgtcag 6262
>emb|Y13734.1|ZMCCRGENE Zea mays mRNA for cinnamoyl CoA reductase Length = 1481 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgc 117 ||||| ||||||||| ||||||||||||| Sbjct: 274 tgcgtgaccggcgcggccgggtacatcgc 302
>dbj|AK073442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044G18, full insert sequence Length = 1342 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 126 tcgtcaagctcctcctcgaccgcggctacaccgtcca 162 ||||||||||||||||| ||| |||||| ||||||| Sbjct: 131 tcgtcaagctcctcctctcccgtggctacgccgtcca 167
>gb|AY103989.1| Zea mays PCO114642 mRNA sequence Length = 1521 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 89 tgcgtcaccggcgcgtccgggtacatcgc 117 ||||| ||||||||| ||||||||||||| Sbjct: 314 tgcgtgaccggcgcggccgggtacatcgc 342
>dbj|D83971.1| Vigna unguiculata mRNA for CPRD14 protein, complete cds Length = 1227 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 95 accggcgcgtccgggtacatcgcgtcctggatcgtcaagctcctcctcgaccgcggctac 154 ||||| || ||||| ||||| || |||||| |||| ||| | || ||||| ||||||||| Sbjct: 75 accggagcttccggttacattgcttcctgggtcgttaagtttcttctcgaacgcggctac 134 Query: 155 accgt 159 ||||| Sbjct: 135 accgt 139
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gctcgtctgcgtcaccggcg 101 |||||||||||||||||||| Sbjct: 2927794 gctcgtctgcgtcaccggcg 2927775
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 ttccatgcggcttctccagt 327 |||||||||||||||||||| Sbjct: 477211 ttccatgcggcttctccagt 477192
>ref|XM_500877.1| Yarrowia lipolytica CLIB122, YALI0B14289g predicted mRNA Length = 2610 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 tgctcttgatggagcaaacg 230 |||||||||||||||||||| Sbjct: 1197 tgctcttgatggagcaaacg 1216
>gb|AC093550.3| Drosophila melanogaster 3L BAC RP98-24K7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184523 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 acgctgccattgacggttgc 298 |||||||||||||||||||| Sbjct: 154532 acgctgccattgacggttgc 154551
>gb|AF380248.1| Peromyscus polionotus microsatellite PO3-68 sequence Length = 342 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gctgacccaaataaaacatt 201 |||||||||||||||||||| Sbjct: 322 gctgacccaaataaaacatt 341
>emb|AJ537555.1|UNK537555 Uncultured bacterium lip1 gene Length = 2285 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 attgttgatgaaacatggtt 510 |||||||||||||||||||| Sbjct: 2130 attgttgatgaaacatggtt 2149
>gb|AC010156.6| Drosophila melanogaster 3L NOVECTOR RP98-27H3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164831 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 acgctgccattgacggttgc 298 |||||||||||||||||||| Sbjct: 90056 acgctgccattgacggttgc 90037
>gb|AY256381.1| Gypsophila elegans dihydroflavonol 4-reductase (dfr) mRNA, complete cds Length = 1280 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 cgtctgcgtcaccggcgcgtccgg 108 |||||||||||| ||||||||||| Sbjct: 109 cgtctgcgtcactggcgcgtccgg 132
>gb|AE004603.1| Pseudomonas aeruginosa PAO1, section 164 of 529 of the complete genome Length = 11274 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 tcaagctcctcctcgaccgc 148 |||||||||||||||||||| Sbjct: 10891 tcaagctcctcctcgaccgc 10872
>gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete sequence Length = 187799 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gtgctcttgatggagcaaac 229 |||||||||||||||||||| Sbjct: 176456 gtgctcttgatggagcaaac 176475
>gb|AF112870.1|AF112870 Pseudomonas aeruginosa nitrate transporter (nasT) and protein kinase B (ppkB) genes, complete cds; and nitrate reductase (nasR) gene, partial cds Length = 4857 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tcaagctcctcctcgaccgc 148 |||||||||||||||||||| Sbjct: 4414 tcaagctcctcctcgaccgc 4433
>gb|AE003549.4| Drosophila melanogaster chromosome 3L, section 36 of 83 of the complete sequence Length = 295143 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 acgctgccattgacggttgc 298 |||||||||||||||||||| Sbjct: 142690 acgctgccattgacggttgc 142709
>emb|AL935160.11| Zebrafish DNA sequence from clone CH211-184C7 in linkage group 12, complete sequence Length = 140401 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 gctttgtaaaaagaatcagc 542 |||||||||||||||||||| Sbjct: 115079 gctttgtaaaaagaatcagc 115098
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 tcgaccgcggctacaccgtc 160 |||||||||||||||||||| Sbjct: 2189295 tcgaccgcggctacaccgtc 2189276
>ref|NM_213954.1| Sus scrofa heart aconitase (ACO2), mRNA Length = 2665 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 cggggaagctcgtctgcgtc 94 |||||||||||||||||||| Sbjct: 1630 cggggaagctcgtctgcgtc 1611
>emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in linkage group 12, complete sequence Length = 262809 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gctttgtaaaaagaatcagc 542 |||||||||||||||||||| Sbjct: 120267 gctttgtaaaaagaatcagc 120248
>emb|BX072536.4| Mouse DNA sequence from clone RP23-5A21 on chromosome X, complete sequence Length = 246587 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 ttgatgaaacatggttttca 514 |||||||||||||||||||| Sbjct: 221151 ttgatgaaacatggttttca 221170
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tgctcttgatggagcaaacg 230 |||||||||||||||||||| Sbjct: 1905827 tgctcttgatggagcaaacg 1905808
>gb|J05224.1|PIGACON Pig heart aconitase mRNA, complete cds Length = 2665 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 cggggaagctcgtctgcgtc 94 |||||||||||||||||||| Sbjct: 1630 cggggaagctcgtctgcgtc 1611 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,226,686 Number of Sequences: 3902068 Number of extensions: 4226686 Number of successful extensions: 80319 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 79736 Number of HSP's gapped (non-prelim): 570 length of query: 611 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 588 effective length of database: 17,143,297,704 effective search space: 10080259049952 effective search space used: 10080259049952 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
