Clone Name | baaln09 |
---|---|
Clone Library Name | barley_pub |
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 167 bits (423), Expect = 6e-42 Identities = 82/115 (71%), Positives = 89/115 (77%) Frame = +1 Query: 19 TLFVFEEALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGT 198 TLFV E AL+GFAEHRR QDW PGSMGKQYFLGLEK LGGSGDPAYPGGP+FNPLGFG Sbjct: 154 TLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFG- 212 Query: 199 XXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNIL 363 NGRLAMLA LG +QA+ TGVGP+QNLLDHL+DPVNNN+L Sbjct: 213 KDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVL 267
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 87.0 bits (214), Expect = 1e-17 Identities = 54/115 (46%), Positives = 64/115 (55%) Frame = +1 Query: 19 TLFVFEEALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGT 198 TLFV E L + E RR QD NPGS+ + ++Y G+ YPGG IFNPL F Sbjct: 141 TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF--KQYSLPKGEVGYPGG-IFNPLNFAP 197 Query: 199 XXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNIL 363 NGRLAMLAFLG +Q TG GPF+NLL HLSDP +N I+ Sbjct: 198 TQEAKEKELA-----NGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIV 247 Score = 28.1 bits (61), Expect = 5.5 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 5/66 (7%) Frame = +1 Query: 127 KYLGGSGDPAYPGGPI-----FNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQA 291 ++L G P Y G + F+PLG NGR AML GM L Sbjct: 56 EWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELV-NGRWAMLGVAGMLLPE 114 Query: 292 IFTGVG 309 +FT +G Sbjct: 115 VFTKIG 120
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 82.4 bits (202), Expect = 2e-16 Identities = 48/109 (44%), Positives = 56/109 (51%) Frame = +1 Query: 19 TLFVFEEALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGT 198 TLFV E LIG+AE RR D PG + K G D YPGG F+PLG+G+ Sbjct: 152 TLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPGGLWFDPLGWGS 209 Query: 199 XXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDP 345 NGRLAMLA +G Q I+TG GP NL HL+DP Sbjct: 210 GSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 81.6 bits (200), Expect = 4e-16 Identities = 47/109 (43%), Positives = 56/109 (51%) Frame = +1 Query: 19 TLFVFEEALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGT 198 TLF+ E LIG+AE RR D PG + K G D YPGG F+PLG+G+ Sbjct: 152 TLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGT--DVGYPGGLWFDPLGWGS 209 Query: 199 XXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDP 345 NGRLAMLA +G Q I+TG GP NL HL+DP Sbjct: 210 GSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 67.8 bits (164), Expect = 6e-12 Identities = 38/75 (50%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 184 LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 241 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHLSDPVNNN Sbjct: 242 LENLADHLSDPVNNN 256
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 67.4 bits (163), Expect = 8e-12 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 180 LGEVVDPLYPGGS-FDPLGLADDAEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 237 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 238 LENLADHLADPVNNN 252
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 67.0 bits (162), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 190 LGEVTDPIYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 247 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 248 IENLADHLADPVNNN 262
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 67.0 bits (162), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 172 LGEVTDPIYPGGS-FDPLGLADDPEALAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 229 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 230 LENLADHLADPVNNN 244
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 67.0 bits (162), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 122 LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 179 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 180 LENLADHLADPVNNN 194
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 67.0 bits (162), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 171 LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 228 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 229 LENLADHLADPVNNN 243
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 67.0 bits (162), Expect = 1e-11 Identities = 39/83 (46%), Positives = 46/83 (55%) Frame = +1 Query: 109 YFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQ 288 Y + E LG + D YPGG F+PLG T NGRLAM + G +Q Sbjct: 174 YRVAGEGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKEIK-NGRLAMFSMFGFFVQ 231 Query: 289 AIFTGVGPFQNLLDHLSDPVNNN 357 AI TG GP +NL DHL+DPVNNN Sbjct: 232 AIVTGKGPLENLADHLADPVNNN 254
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 67.0 bits (162), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 313 FQNLLDHLSDPVNNN 357 NL+DHL+DPVNNN Sbjct: 241 LDNLVDHLADPVNNN 255
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 194 LGEVTDPIYPGGN-FDPLGLADDPDAFADVKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 251 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 252 IENLADHLADPVNNN 266
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 194 LGEVTDPIYPGGN-FDPLGLADDPDAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 251 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 252 IENLADHLADPVNNN 266
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 241 LENLADHLADPVNNN 255
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 241 LENLADHLADPVNNN 255
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKHIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 241 LENLADHLADPVNNN 255
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 241 LENLADHLADPVNNN 255
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 241 LENLADHLADPVNNN 255
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 241 LENLADHLADPVNNN 255
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 43/75 (57%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG + D YPGG F+PLG T NGRLAM + G +QAI TG GP Sbjct: 183 LGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 241 IENLADHLADPVNNN 255
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 43/75 (57%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG + D YPGG F+PLG T NGRLAM + G +QAI TG GP Sbjct: 183 LGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 241 IENLADHLADPVNNN 255
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 180 LGEIVDPLYPGGS-FDPLGLAEDPERSAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 237 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 238 LENLADHLADPVNNN 252
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 239 LENLADHLADPVNNN 253
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 239 LENLADHLADPVNNN 253
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 239 LENLADHLADPVNNN 253
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGT-FDPLGLADDPEAFADVKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 239 LENLADHLADPVNNN 253
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 239 LENLADHLADPVNNN 253
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGA-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 239 LENLADHLADPVNNN 253
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 32 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 89 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 90 LENLADHLADPVNNN 104
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 182 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 240 LENLADHLADPVNNN 254
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 185 LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 242 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 243 LENLADHLADPVNNN 257
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 66.6 bits (161), Expect = 1e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 177 LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 234 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 235 LENLADHLADPVNNN 249
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 66.2 bits (160), Expect = 2e-11 Identities = 34/73 (46%), Positives = 39/73 (53%) Frame = +1 Query: 139 GSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQ 318 G G+ YPGG F+PLG NGRLAM + G +QAI TG GP + Sbjct: 185 GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGPLE 243 Query: 319 NLLDHLSDPVNNN 357 NL DHL DPV NN Sbjct: 244 NLFDHLDDPVANN 256
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 66.2 bits (160), Expect = 2e-11 Identities = 34/73 (46%), Positives = 40/73 (54%) Frame = +1 Query: 139 GSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQ 318 G G+ YPGG F+PLG NGRLAM + G +QAI TG GP + Sbjct: 182 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGPLE 240 Query: 319 NLLDHLSDPVNNN 357 NLLDHL +PV NN Sbjct: 241 NLLDHLDNPVANN 253
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 66.2 bits (160), Expect = 2e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 182 LGEVIDPLYPGGS-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 240 LENLADHLADPVNNN 254
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 66.2 bits (160), Expect = 2e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 182 LGEVIDPLYPGGS-FDPLGLADDPEAFAELEVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 240 LENLADHLADPVNNN 254
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 66.2 bits (160), Expect = 2e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVIDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 241 LENLADHLADPVNNN 255
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 65.9 bits (159), Expect = 2e-11 Identities = 36/75 (48%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QA+ TG GP Sbjct: 182 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQALVTGKGP 239 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 240 LENLADHLADPVNNN 254
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 65.9 bits (159), Expect = 2e-11 Identities = 36/75 (48%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 178 LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 235 Query: 313 FQNLLDHLSDPVNNN 357 +NL DH++DPVNNN Sbjct: 236 LENLADHIADPVNNN 250
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 65.9 bits (159), Expect = 2e-11 Identities = 36/75 (48%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 313 FQNLLDHLSDPVNNN 357 +NL DH++DPVNNN Sbjct: 241 LENLADHIADPVNNN 255
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 65.9 bits (159), Expect = 2e-11 Identities = 36/75 (48%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 240 Query: 313 FQNLLDHLSDPVNNN 357 +NL DH++DPVNNN Sbjct: 241 LENLADHIADPVNNN 255
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 65.9 bits (159), Expect = 2e-11 Identities = 37/75 (49%), Positives = 41/75 (54%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 183 LGVVVDPLYPGGS-FDPLGLAEDPEAFAELKVKETK-NGRLAMFSMFGFFIQAIVTGKGP 240 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL DPVNNN Sbjct: 241 LENLADHLVDPVNNN 255
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 64.7 bits (156), Expect = 5e-11 Identities = 37/75 (49%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP Y GG F+PLG G NGRLAM + G +QAI TG GP Sbjct: 180 LGEVVDPLYLGGS-FDPLGLGDDPERFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 237 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 238 IENLADHLTDPVNNN 252
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 64.7 bits (156), Expect = 5e-11 Identities = 36/75 (48%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG GRLAML+ G +QAI TG GP Sbjct: 181 LGEVVDPLYPGGS-FDPLGLADDPEAFGELKVKELK-KGRLAMLSMFGFFVQAIVTGKGP 238 Query: 313 FQNLLDHLSDPVNNN 357 +NL DH++DPVNNN Sbjct: 239 LENLADHIADPVNNN 253
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 64.3 bits (155), Expect = 7e-11 Identities = 36/75 (48%), Positives = 41/75 (54%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G + AI TG GP Sbjct: 144 LGEVVDPLYPGGS-FDPLGLAEVPEAFAELKVKELK-NGRLAMFSMFGFFVPAIVTGKGP 201 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 202 LENLADHLADPVNNN 216
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 64.3 bits (155), Expect = 7e-11 Identities = 36/75 (48%), Positives = 41/75 (54%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEGLDPIYPGGA-FDPLGLADDPDAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPV NN Sbjct: 239 IENLFDHLADPVANN 253
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 64.3 bits (155), Expect = 7e-11 Identities = 36/75 (48%), Positives = 41/75 (54%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 179 LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 236 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+ PVNNN Sbjct: 237 LENLADHLAGPVNNN 251
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 63.9 bits (154), Expect = 9e-11 Identities = 36/75 (48%), Positives = 41/75 (54%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEGLDPLYPGGA-FDPLGLADDPDSFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 313 FQNLLDHLSDPVNNN 357 QNL DH++DPV NN Sbjct: 239 IQNLYDHVADPVANN 253
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 63.9 bits (154), Expect = 9e-11 Identities = 35/75 (46%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 182 LGEIVDPLYPGGS-FDPLGLAERPQAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239 Query: 313 FQNLLDHLSDPVNNN 357 ++L DH++DPVNNN Sbjct: 240 LEDLADHIADPVNNN 254
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 63.2 bits (152), Expect = 2e-10 Identities = 35/75 (46%), Positives = 41/75 (54%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 180 LGEGLDPLYPGGA-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 237 Query: 313 FQNLLDHLSDPVNNN 357 +NL DH++DPV NN Sbjct: 238 IENLADHIADPVANN 252
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 63.2 bits (152), Expect = 2e-10 Identities = 36/75 (48%), Positives = 41/75 (54%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 184 LGEVTDPIYPGGS-FDPLGLADDPDTFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 241 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPV NN Sbjct: 242 LENLNDHLADPVANN 256
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 63.2 bits (152), Expect = 2e-10 Identities = 35/75 (46%), Positives = 41/75 (54%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PL NGRLAM + G +QAI TG GP Sbjct: 161 LGEVTDPIYPGGS-FDPLALADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 218 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL++PVNNN Sbjct: 219 LENLADHLAEPVNNN 233
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 62.0 bits (149), Expect = 3e-10 Identities = 36/75 (48%), Positives = 42/75 (56%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG + D YPGG F+PL T NGRLAM + G +QAI TG GP Sbjct: 40 LGEAEDLLYPGGS-FDPLASLTDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 97 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPVNNN Sbjct: 98 LENLADHLADPVNNN 112
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 61.6 bits (148), Expect = 4e-10 Identities = 35/75 (46%), Positives = 40/75 (53%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEVEDPIYPGGS-FDPLGLADDPEAFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DP NN Sbjct: 239 IENLSDHLADPAVNN 253
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 61.2 bits (147), Expect = 6e-10 Identities = 35/75 (46%), Positives = 40/75 (53%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPG F+PLG NGRLAM + G +QAI TG GP Sbjct: 66 LGEGLDPLYPGDA-FDPLGLADDPEAKAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 123 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPV NN Sbjct: 124 IENLYDHLADPVANN 138
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 60.5 bits (145), Expect = 1e-09 Identities = 34/72 (47%), Positives = 39/72 (54%) Frame = +1 Query: 148 DPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLL 327 D +PGGP F+PLG NGRLAM A LG +QA TG GP +NL Sbjct: 198 DKLHPGGP-FDPLGLAKDPEQGALLKVKEIK-NGRLAMFAMLGFFIQAYVTGEGPVENLA 255 Query: 328 DHLSDPVNNNIL 363 HLSDP NN+L Sbjct: 256 KHLSDPFGNNLL 267
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 60.5 bits (145), Expect = 1e-09 Identities = 35/75 (46%), Positives = 40/75 (53%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP PGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 182 LGEGLDPLLPGGA-FDPLGLADDPEACAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 239 Query: 313 FQNLLDHLSDPVNNN 357 +NL DHL+DPV NN Sbjct: 240 IENLYDHLADPVANN 254
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 60.5 bits (145), Expect = 1e-09 Identities = 34/75 (45%), Positives = 40/75 (53%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG D YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 179 LGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKELK-NGRLAMFSMFGFFVQAIVTGKGP 236 Query: 313 FQNLLDHLSDPVNNN 357 +NL DH++DPV NN Sbjct: 237 IENLFDHVADPVANN 251
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 60.1 bits (144), Expect = 1e-09 Identities = 34/75 (45%), Positives = 40/75 (53%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG D YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 313 FQNLLDHLSDPVNNN 357 +NL DH++DPV NN Sbjct: 239 IENLFDHVADPVANN 253
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 59.7 bits (143), Expect = 2e-09 Identities = 34/69 (49%), Positives = 38/69 (55%) Frame = +1 Query: 148 DPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLL 327 D YPGGP F+PLG NGRLAM + LG +QAI TG GP QNL Sbjct: 174 DTLYPGGP-FDPLGLADDPDTFAELKVKEIK-NGRLAMFSCLGFFVQAIVTGKGPVQNLT 231 Query: 328 DHLSDPVNN 354 DHL+DP N Sbjct: 232 DHLADPTVN 240
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 59.7 bits (143), Expect = 2e-09 Identities = 34/75 (45%), Positives = 40/75 (53%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG D YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 313 FQNLLDHLSDPVNNN 357 +NL DH++DPV NN Sbjct: 239 IENLYDHVADPVANN 253
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 59.7 bits (143), Expect = 2e-09 Identities = 34/75 (45%), Positives = 40/75 (53%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG D YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 181 LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 238 Query: 313 FQNLLDHLSDPVNNN 357 +NL DH++DPV NN Sbjct: 239 IENLSDHINDPVANN 253
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 59.7 bits (143), Expect = 2e-09 Identities = 34/75 (45%), Positives = 40/75 (53%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG D YPGG F+PLG NGRLAM + G +QAI TG GP Sbjct: 153 LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIK-NGRLAMFSMFGFFVQAIVTGKGP 210 Query: 313 FQNLLDHLSDPVNNN 357 +NL DH++DPV NN Sbjct: 211 IENLSDHIADPVANN 225
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 58.9 bits (141), Expect = 3e-09 Identities = 33/70 (47%), Positives = 38/70 (54%) Frame = +1 Query: 148 DPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLL 327 DP YPG F+PLG NGRLAM A LG +QAI TG GP +NL Sbjct: 195 DPLYPG-EAFDPLGLADDPDTFAELKVKEIK-NGRLAMFACLGFFVQAIVTGKGPIENLT 252 Query: 328 DHLSDPVNNN 357 DHL++P NN Sbjct: 253 DHLANPAENN 262
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 57.8 bits (138), Expect = 6e-09 Identities = 33/70 (47%), Positives = 37/70 (52%) Frame = +1 Query: 148 DPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLL 327 DP YPG F+PLG NGRLAM + G +QAI TG GP QNL Sbjct: 177 DPLYPGES-FDPLGLADDPDTFAELKVKEIK-NGRLAMFSCFGFFVQAIVTGKGPIQNLA 234 Query: 328 DHLSDPVNNN 357 DHL+DP NN Sbjct: 235 DHLADPGTNN 244
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 56.6 bits (135), Expect = 1e-08 Identities = 40/115 (34%), Positives = 52/115 (45%) Frame = +1 Query: 19 TLFVFEEALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGT 198 TL E +IG+ E +R + L EK L YPGG F+PLG Sbjct: 190 TLIWIEVLVIGYIEFQRNAE------------LDSEKRL-------YPGGKFFDPLGLAA 230 Query: 199 XXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNIL 363 + RLAM+AFLG ++QA TG GP N HLSDP++ I+ Sbjct: 231 DPEKTAQLQLAEIK-HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTII 284
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 55.1 bits (131), Expect = 4e-08 Identities = 39/115 (33%), Positives = 52/115 (45%) Frame = +1 Query: 19 TLFVFEEALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGT 198 TL E +IG+ E +R + L EK L YPGG F+PLG + Sbjct: 187 TLIWIEVLVIGYIEFQRNAE------------LDSEKRL-------YPGGKFFDPLGLAS 227 Query: 199 XXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNIL 363 + RLAM+ FLG ++QA TG GP N HLSDP++ I+ Sbjct: 228 DPVKKAQLQLAEIK-HARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTII 281
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 53.5 bits (127), Expect = 1e-07 Identities = 41/118 (34%), Positives = 54/118 (45%), Gaps = 1/118 (0%) Frame = +1 Query: 10 TPDTLFVFEEALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLG 189 T T+ E I F EH+R SM K S YPGG F+PLG Sbjct: 138 TLPTILAIEFLAIAFVEHQR--------SMEKD-----------SEKKKYPGGA-FDPLG 177 Query: 190 FGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQ-AIFTGVGPFQNLLDHLSDPVNNNI 360 + + NGRLA+LA +G +Q + + G GP +NL HL+DP +NNI Sbjct: 178 Y-SKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNI 234
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 52.8 bits (125), Expect = 2e-07 Identities = 31/70 (44%), Positives = 36/70 (51%) Frame = +1 Query: 148 DPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLL 327 DP YPG F+PLG NGRLA + G +QAI TG GP QNL Sbjct: 174 DPLYPGES-FDPLGLADDPDTFAELKVKEIK-NGRLASFSMFGFFVQAIVTGKGPVQNLD 231 Query: 328 DHLSDPVNNN 357 DHL++P NN Sbjct: 232 DHLANPTVNN 241
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 52.0 bits (123), Expect = 4e-07 Identities = 32/70 (45%), Positives = 35/70 (50%) Frame = +1 Query: 148 DPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLL 327 D YPGGP F+PLG NGRLAM LG QAI TG GP +N L Sbjct: 43 DRLYPGGP-FDPLGLADDPDTFPELKVKEIK-NGRLAMSGMLGFYAQAIVTGEGPVENWL 100 Query: 328 DHLSDPVNNN 357 HL DP +N Sbjct: 101 YHLQDPSAHN 110
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 46.2 bits (108), Expect = 2e-05 Identities = 28/74 (37%), Positives = 36/74 (48%) Frame = +1 Query: 139 GSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQ 318 G+ D +YPG F+PL T NGRLAM LG++ Q + TG P Sbjct: 263 GTADRSYPG---FDPLKLTTDYTKREIK-------NGRLAMTGLLGLTFQYLATGESPLA 312 Query: 319 NLLDHLSDPVNNNI 360 NL H ++PV NI Sbjct: 313 NLAAHFANPVGANI 326 Score = 46.2 bits (108), Expect = 2e-05 Identities = 36/107 (33%), Positives = 45/107 (42%) Frame = +1 Query: 40 ALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXX 219 ALI L+ W G G G EKY D +YPG F+P T Sbjct: 49 ALISLQVVAPLEYWRGNGGFGWD---GEEKY-----DRSYPG---FDPCNLTTEYTKAAE 97 Query: 220 XXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNI 360 NGRLAM+ G+ +Q T GP NL++HL P+ NI Sbjct: 98 IK------NGRLAMIGMFGLEVQNHVTAQGPVANLIEHLRHPLAANI 138
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 45.4 bits (106), Expect = 3e-05 Identities = 30/77 (38%), Positives = 35/77 (45%) Frame = +1 Query: 133 LGGSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 LG DP YPG F+ LG NGRLAM + G +QAI + Sbjct: 185 LGEVTDPLYPGS--FDSLGLAEDTEAFAELKVKELK-NGRLAMFSMFGFFVQAIVSRKDR 241 Query: 313 FQNLLDHLSDPVNNNIL 363 +NL DHL VNNN L Sbjct: 242 LENLADHLGWTVNNNAL 258
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 44.3 bits (103), Expect = 7e-05 Identities = 27/74 (36%), Positives = 36/74 (48%) Frame = +1 Query: 139 GSGDPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQ 318 G D +YPG F+PL T NGRLA+ A G++ Q + TG P Sbjct: 291 GELDRSYPG---FDPLNLTTDYTRAAEVK------NGRLALTAVAGLTAQYLATGESPLA 341 Query: 319 NLLDHLSDPVNNNI 360 NL HL++P+ NI Sbjct: 342 NLSAHLANPIGANI 355 Score = 41.2 bits (95), Expect = 6e-04 Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 2/75 (2%) Frame = +1 Query: 142 SGDPA--YPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPF 315 + DP YPG F+PL T NGRLA+ A LG +Q G P Sbjct: 102 NSDPTTIYPG---FDPLNLTTDYTKEAEIK------NGRLALTALLGFEVQRHVVGGSPL 152 Query: 316 QNLLDHLSDPVNNNI 360 NL +HL P+ NI Sbjct: 153 ANLAEHLQQPLQRNI 167 Score = 35.8 bits (81), Expect = 0.026 Identities = 22/61 (36%), Positives = 28/61 (45%) Frame = +1 Query: 148 DPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQNLL 327 D +YPG F+PL T NGRLAM G+ +Q+ TG P NL+ Sbjct: 479 DQSYPG---FDPLNLTTEYTKEAEIK------NGRLAMNGMFGLEVQSHVTGKSPINNLI 529 Query: 328 D 330 D Sbjct: 530 D 530
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 38.9 bits (89), Expect = 0.003 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Frame = +1 Query: 118 GLEKYLGGSGDP---AYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQ 288 G E Y +P YPGG +F+PL + + RLAM++F G +Q Sbjct: 196 GAEFYRNSETNPEKRCYPGG-VFDPLKLASEDEERAFRLKTAEIKHARLAMVSFFGYGVQ 254 Query: 289 AIFTGVGPFQNLLDHLSDPVNN 354 A+ TG G +L +D +NN Sbjct: 255 ALSTGEGALGSLA-KFADGLNN 275
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 36.6 bits (83), Expect = 0.015 Identities = 23/52 (44%), Positives = 27/52 (51%) Frame = +1 Query: 157 YPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGP 312 YPGG F+PLG + RLAM+AFL +LQA FTG GP Sbjct: 218 YPGG-YFDPLGLAADPEKLDTLKLAEIK-HSRLAMVAFLIFALQAAFTGKGP 267
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 35.4 bits (80), Expect = 0.034 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Frame = +1 Query: 19 TLFVFEEALIGFAEHRRLQDWYNPGSMGKQYFLG----LEKYLGGSGDPAYPGGPIFNPL 186 TL + L+G+ E +R D+++P S ++ E + +G+ YPGG F+PL Sbjct: 147 TLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPL 206 Score = 27.7 bits (60), Expect = 7.2 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = +1 Query: 148 DPAYPGGPIFNPLGFGTXXXXXXXXXXXXXXXNGRLAMLAFLGMSLQAIFTGVGPFQ 318 D + PG F+PLG G +GR AMLA LG+ + +TG+ F+ Sbjct: 77 DGSLPGDFGFDPLGLGKDPAFLKWYREAELI-HGRWAMLAVLGIFVGQAWTGIPWFE 132
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 34.7 bits (78), Expect = 0.059 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Frame = +1 Query: 19 TLFVFEEALIGFAEHRRLQDWYNPGSMGKQYFLG----LEKYLGGSGDPAYPGGPIFNPL 186 TL + L+G+ E +R D+++P S ++ E + +G+ YPGG F+PL Sbjct: 142 TLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPL 201
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 31.6 bits (70), Expect = 0.50 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 10/46 (21%) Frame = +1 Query: 91 GSMGKQYFLGLEKY---LGGSGDPAYPGGPIF-------NPLGFGT 198 GS G+Q G Y GG+G+P YPG P F PLG GT Sbjct: 321 GSQGEQGLGGTPGYPGTKGGAGEPGYPGRPGFEGDCGPEGPLGEGT 366 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/28 (57%), Positives = 17/28 (60%) Frame = +3 Query: 39 GTDRLRRAPAAPGLVQPGFHGEAVLPGS 122 GTD L P A G QPGF GEA PG+ Sbjct: 997 GTDGLPGLPGADG--QPGFVGEAGEPGT 1022 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/28 (46%), Positives = 13/28 (46%) Frame = +1 Query: 88 PGSMGKQYFLGLEKYLGGSGDPAYPGGP 171 PG G GL G G P YPGGP Sbjct: 622 PGLKGDHGLPGLPGRPGSDGLPGYPGGP 649
>API_ACHLY (P15636) Protease 1 precursor (EC 3.4.21.50) (Protease I) (API)| (Lysyl endopeptidase) Length = 653 Score = 31.2 bits (69), Expect = 0.65 Identities = 20/51 (39%), Positives = 24/51 (47%) Frame = +1 Query: 28 VFEEALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFN 180 VF G A RL DW +P S G Q+ GL+ G G P P P+ N Sbjct: 435 VFTSWTGGGAAASRLSDWLDPASTGAQFIDGLD---SGGGTPNTP--PVAN 480
>MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (ACAMP-81) Length = 331 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -3 Query: 91 PGCTSPGAAGALRSRSVPPRTRRACQGSAQ 2 PGC P A GA R + PPR AC +Q Sbjct: 287 PGC--PRAGGAPREEAAPPRASSACSAPSQ 314
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 29.6 bits (65), Expect = 1.9 Identities = 31/95 (32%), Positives = 37/95 (38%), Gaps = 2/95 (2%) Frame = +1 Query: 46 IGFAEHRRLQ-DWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTXXXXXXXX 222 IG AE R+ W P G F L+ D G F+PLG Sbjct: 151 IGLAESYRVSLGWATPTGTG---FNNLK-------DEYDLGNLYFDPLGLKPEDPEELRE 200 Query: 223 XXXXXXXNGRLAMLAFLGMSLQAIF-TGVGPFQNL 324 NGRLAM+A G LQ + GV FQ+L Sbjct: 201 LQTKELNNGRLAMIAIAGFVLQEVAEPGVEIFQHL 235
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +1 Query: 43 LIGFAEHRRLQDWYNPGSMGKQYFLG----LEKYLGGSGDPAYPGGPIFNPL 186 L+G+ E +R D+++ S + E + +G+ YPGG F+PL Sbjct: 150 LMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPL 201
>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor| Length = 1690 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 88 PGSMGKQYFLGLEKYLGGSGDPAYPGGPIFN 180 PGS G + F+G G G+P PG P F+ Sbjct: 1032 PGSTGLRGFIGFPGLPGDQGEPGSPGPPGFS 1062 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +1 Query: 88 PGSMGKQYFLGLEKYLGGSGDPAYPG 165 PG G + LGL +LG GDP PG Sbjct: 508 PGRQGSKGDLGLPGWLGTKGDPGPPG 533 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +1 Query: 85 NPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFG 195 +PG G++ G + Y GG G P G P P GFG Sbjct: 1425 SPGPPGRKGDTGEDGYPGGPGPPGPIGDP--GPKGFG 1459 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +1 Query: 85 NPGSMGKQYFLGLEKYLGGSGDPAYPGG 168 +PG G + G+ + G GDP +PGG Sbjct: 126 HPGPPGPRGKPGMSGHNGSRGDPGFPGG 153
>CY1_MOUSE (Q9D0M3) Cytochrome c1, heme protein, mitochondrial precursor| (Cytochrome c-1) Length = 325 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 Query: 91 PGCTSPGAAGALRSRSVPPRTRRACQGSAQ 2 PG ++PG G RSR +P RT +A S++ Sbjct: 21 PGASAPGLLGGARSRQLPLRTPQAVSLSSK 50
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 28.9 bits (63), Expect = 3.2 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Frame = +3 Query: 63 PAAPGLVQPGFHGEAVLPGSREVXXXXXXXXXXXXAHLQP-TRVRHQEREGDEGAQAQGD 239 P A QP G PG ++ A QP T+ + Q+++ +G Q Sbjct: 3745 PKADTQAQPQMQGRQAAPGPQQSQPPSSRQTPSGTASRQPQTQQQQQQQQQQQGLGQQAP 3804 Query: 240 QERPSRHARL 269 Q+ PS+ ARL Sbjct: 3805 QQAPSQ-ARL 3813
>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +1 Query: 88 PGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLG 189 PG G+Q F+G G G P PG P+ P G Sbjct: 1203 PGVKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKG 1236
>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +1 Query: 88 PGSMGKQYFLGLEKYLGGSGDPAYPGGP 171 PG MG G++ G G+P +PG P Sbjct: 1250 PGPMGPPGLPGIDGVKGDKGNPGWPGAP 1277
>TBX15_MOUSE (O70306) T-box transcription factor TBX15 (T-box protein 15)| (MmTBx8) Length = 602 Score = 28.1 bits (61), Expect = 5.5 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = +1 Query: 37 EALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPG 165 EALIG + R+L+DW G L LG + DPA G Sbjct: 21 EALIGSNKKRKLRDWEEKGLDLSMEALSPAGPLGDTDDPATHG 63
>CO4A2_CAEEL (P17140) Collagen alpha-2(IV) chain precursor (Lethal protein 2)| Length = 1758 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +1 Query: 88 PGSMGKQYFLGLEKYLGGSGDPAYPGGPIFN 180 PG G+ + G + G SG P PGG FN Sbjct: 333 PGQKGEAGYPGRDGPKGNSGPPGPPGGGTFN 363
>VL1_HPV18 (P06794) Major capsid protein L1| Length = 568 Score = 27.7 bits (60), Expect = 7.2 Identities = 20/64 (31%), Positives = 29/64 (45%) Frame = +1 Query: 7 PTPDTLFVFEEALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPL 186 P D++F FA H W G+MG L Y+ G+G PA PG +++P Sbjct: 302 PYGDSMFFCLRREQLFARHF----WNRAGTMGDTVPQSL--YIKGTGMPASPGSCVYSPS 355 Query: 187 GFGT 198 G+ Sbjct: 356 PSGS 359
>HEMH_SYNEL (Q8DGU6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 388 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +1 Query: 244 NGRLAMLAFLGMSLQAIFTGVGPFQNL 324 NGRLAML FL + ++ I +G GP L Sbjct: 360 NGRLAMLGFLALMIELI-SGQGPLHML 385
>COLI_CAVPO (P19402) Corticotropin-lipotropin precursor (Pro-opiomelanocortin)| (POMC) [Contains: NPP; Melanotropin gamma (Gamma-MSH); Corticotropin (Adrenocorticotropic hormone) (ACTH); Melanotropin alpha (Alpha-MSH); Corticotropin-like intermediary pepti Length = 256 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +3 Query: 39 GTDRLRRAPAAPGLVQPGFHGEAVLPGSRE 128 G + R AA PGFHG+ V PG RE Sbjct: 94 GASQKREEEAAAA--DPGFHGDGVEPGLRE 121
>CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor| Length = 1691 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Frame = +1 Query: 4 GPTPDTLFVFEEALIGFAEHRRLQDWYNP-GSMGKQYFLGLEKYLGGSGDPAYPGGP 171 GPT F L G R P G G + +G+ +LG +G P +PG P Sbjct: 59 GPTGPQGFTGSTGLSGLKGERGFPGLLGPYGPKGDKGPMGVPGFLGINGIPGHPGQP 115
>POL1_GFLV (P29149) RNA1 polyprotein (P1) [Contains: P1A protein (1A) (Protease| cofactor); Putative ATP-dependent helicase (EC 3.6.1.-) (NTP-binding protein) (NTB) (1B) (Membrane-binding protein); Viral genome-linked protein (1C-VPg); Picornain 3C-like pr Length = 2284 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/61 (26%), Positives = 29/61 (47%) Frame = +1 Query: 16 DTLFVFEEALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFG 195 + +++ EE L+ +Q WY+PG + + L++ + G D Y F+PL Sbjct: 1543 EPMYLLEEKLLDEVAGDMVQTWYDPGEFLED--ISLDQAINGDMDEEY-----FDPLVMD 1595 Query: 196 T 198 T Sbjct: 1596 T 1596 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,120,228 Number of Sequences: 219361 Number of extensions: 686162 Number of successful extensions: 3293 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 2553 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3233 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)