Clone Information

BLAST Search Result

Clone Name	baalm24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	gb\|AY105920.1\| Zea mays PCO073266 mRNA sequence	325	1e-85
2	ref\|XM_549818.1\| Oryza sativa (japonica cultivar-group), mRNA	188	1e-44
3	dbj\|AK064812.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	188	1e-44
4	dbj\|AK062086.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	151	3e-33
5	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	82	2e-12
6	dbj\|AP003727.3\| Oryza sativa (japonica cultivar-group) genomic D...	82	2e-12
7	dbj\|AP002969.2\| Oryza sativa (japonica cultivar-group) genomic D...	82	2e-12
8	dbj\|AP003610.2\| Oryza sativa (japonica cultivar-group) genomic D...	82	2e-12
9	ref\|NM_193526.1\| Oryza sativa (japonica cultivar-group), predic...	48	0.034
10	dbj\|AP003267.3\| Oryza sativa (japonica cultivar-group) genomic D...	48	0.034
11	dbj\|AK069494.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	48	0.034
12	gb\|CP000142.2\| Pelobacter carbinolicus DSM 2380, complete genome	46	0.14
13	gb\|AC007307.77\| Mus musculus strain RIII clone mgsriii-p1_7 map ...	44	0.54
14	gb\|AE007259.1\| Sinorhizobium meliloti 1021 plasmid pSymA section...	42	2.1
15	gb\|AF228730.8\| Homo sapiens chromosome 8 clones SCb-332a23, CTB-...	42	2.1
16	ref\|XM_745769.1\| Aspergillus fumigatus Af293 cytochrome P450 (Af...	42	2.1
17	gb\|AY838877.1\| Aspergillus fumigatus putative gliotoxin biosynth...	42	2.1
18	dbj\|BA000030.2\| Streptomyces avermitilis MA-4680 genomic DNA, co...	42	2.1
19	gb\|CP000251.1\| Anaeromyxobacter dehalogenans 2CP-C, complete genome	42	2.1
20	gb\|AY398394.1\| Danio rerio clone RK075A2E10 poly(rC) binding pro...	40	8.4
21	gb\|U61955.1\| Caenorhabditis elegans cosmid M03D4, complete sequence	40	8.4
22	gb\|BC052337.1\| Mus musculus T-cell leukemia/lymphoma 1B, 1, mRNA...	40	8.4
23	gb\|BC021294.2\| Homo sapiens calcium homeostasis endoplasmic reti...	40	8.4
24	ref\|NM_013773.1\| Mus musculus T-cell leukemia/lymphoma 1B, 1 (Tc...	40	8.4
25	ref\|NM_006387.4\| Homo sapiens calcium homeostasis endoplasmic re...	40	8.4
26	gb\|AC124777.4\| Mus musculus BAC clone RP23-90I17 from chromosome...	40	8.4
27	gb\|AC127322.4\| Mus musculus BAC clone RP23-238A8 from chromosome...	40	8.4
28	gb\|AC011726.11\| Homo sapiens chromosome , clone RP11-14I17, comp...	40	8.4
29	gb\|AC161059.4\| Mus musculus BAC clone RP23-82L9 from chromosome ...	40	8.4
30	gb\|AC008764.9\| Homo sapiens chromosome 19 clone CTD-3222D19, com...	40	8.4
31	emb\|CR602259.1\| full-length cDNA clone CS0DC023YM19 of Neuroblas...	40	8.4
32	dbj\|AK136181.1\| Mus musculus in vitro fertilized eggs cDNA, RIKE...	40	8.4
33	ref\|NM_201192.1\| Danio rerio poly(rC) binding protein 2 (pcbp2),...	40	8.4
34	gb\|U94836.2\|HSU94836 Homo sapiens ERPROT 213-21 mRNA, complete cds	40	8.4
35	gb\|AF536542.1\| Homo sapiens SR-related CTD associated factor 6 (...	40	8.4
36	dbj\|BA000043.1\| Geobacillus kaustophilus HTA426 DNA, complete ge...	40	8.4
37	dbj\|AP006618.1\| Nocardia farcinica IFM 10152 DNA, complete genome	40	8.4
38	dbj\|AK026145.1\| Homo sapiens cDNA: FLJ22492 fis, clone HRC11045,...	40	8.4
39	gb\|AF195488.1\|AF195488 Mus musculus T-cell leukemia protein Tcl1...	40	8.4
40	gb\|BC066603.1\| Danio rerio poly(rC) binding protein 2, mRNA (cDN...	40	8.4
41	gb\|BC045508.1\| Danio rerio poly(rC) binding protein 2, mRNA (cDN...	40	8.4
42	gb\|AE016958.1\| Mycobacterium avium subsp. paratuberculosis str. ...	40	8.4
43	dbj\|AB209730.1\| Homo sapiens mRNA for calcium homeostasis endopl...	40	8.4
44	dbj\|AP006119.1\| Lotus japonicus genomic DNA, chromosome 3, clone...	40	8.4
45	dbj\|AB041839.1\| Oryza sativa (indica cultivar-group) Hd1 gene, c...	40	8.4

>gb|AY105920.1| Zea mays PCO073266 mRNA sequence
          Length = 1079

 Score =  325 bits (164), Expect = 1e-85
 Identities = 458/555 (82%), Gaps = 1/555 (0%)
 Strand = Plus / Plus

                                                                       
Query: 33  gccaagcgcaacatcgccaagctgctcgccaactccatcatttaccgctacctctgcagc 92
           |||||||||||||||||||||||||| || || ||||| || |||||||||||| |||| 
Sbjct: 313 gccaagcgcaacatcgccaagctgcttgcgaattccataatataccgctacctcagcagt 372

                                                                       
Query: 93  gaggnacctgctcgaggacgtcctcggcggcaaggacgccctcgccgcgttccgggagtc 152
           |||| || |||| ||||| || || || |||||||||||||||   || |||  ||| ||
Sbjct: 373 gaggaac-tgcttgaggatgttcttggtggcaaggacgccctcagagccttcaaggaatc 431

                                                                       
Query: 153 cgacgagaagggctacctcgaagtcgagaccgaggggctgaagcagctcacgtccatggg 212
            || |||||||| || || |||||||||||||| ||| | ||||||||||||||||||||
Sbjct: 432 tgatgagaagggttatcttgaagtcgagaccgaagggttaaagcagctcacgtccatggg 491

                                                                       
Query: 213 cagcctggtgctctgctgcggcgatggcgccgtcatgaactccaccaacctggggctgct 272
            ||||| || || ||||| || ||||||||||| |||||||| ||||| || ||||||||
Sbjct: 492 tagccttgtactgtgctgtggagatggcgccgttatgaactcaaccaatctagggctgct 551

                                                                       
Query: 273 gaggcatggagtctccatctggatcgacgtcccgcttgaattagccgtgaatgacatgtt 332
           ||||||||| |||||||| ||||| || || || |||||| | || |  |||||||||||
Sbjct: 552 gaggcatggtgtctccatttggattgatgttcctcttgaaatggcagcaaatgacatgtt 611

                                                                       
Query: 333 gaagagcaagggggcggcagctatttcagaccctgattccttttctcaggcaatggcaaa 392
           |||||||| |||  |   ||||| | |||| || || || ||||||||||| |||   ||
Sbjct: 612 gaagagcacgggaacacaagctactacagatccagactctttttctcaggcgatgagcaa 671

                                                                       
Query: 393 gctccgtcagcgttatgatgatctgaaggagcgctatgcagtttctgatgttactgtttc 452
           |||||||||||| |||||||| ||||| ||||||||||  ||||||||| ||||||||||
Sbjct: 672 gctccgtcagcggtatgatgaactgaaagagcgctatggggtttctgatattactgtttc 731

                                                                       
Query: 453 actacagaatgtggcttctcagctaggctacagcagcatcgactctttgagcctggagga 512
           | |||| ||||||||||||||||  || ||||| ||||| ||||   |||  || |||||
Sbjct: 732 agtacaaaatgtggcttctcagcgggggtacagtagcattgacttggtgacgcttgagga 791

                                                                       
Query: 513 catggtcgttgagattgtgagtcggattgagaagctgatccaagcaaaggcaatgatgga 572
           ||||||| |||| || ||||| |  || |||||||||||||  |||||||  ||||||||
Sbjct: 792 catggtccttgaaatcgtgaggcaaatcgagaagctgatccgtgcaaaggagatgatgga 851

                          
Query: 573 agctgctgggaagcc 587
           |||||| ||||||||
Sbjct: 852 agctgcagggaagcc 866

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>ref|XM_549818.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1126

 Score =  188 bits (95), Expect = 1e-44
 Identities = 278/337 (82%), Gaps = 3/337 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cccatctacatcgtcgggnacggnactgcaatgccaagcgcaacatcgccaagctgctcg 60
           |||||||||||||||||   ||  |||| | ||||||||||||||| || ||||| || |
Sbjct: 273 cccatctacatcgtcggaaccg--actgtactgccaagcgcaacattgcaaagctccttg 330

                                                                       
Query: 61  ccaactccatcatttaccgctacctctgcagcgaggnacctgctcgaggacgtcctcggc 120
           |||| |||||||| ||||||||||||||||| || | | ||||| ||||| || || || 
Sbjct: 331 ccaattccatcatataccgctacctctgcagtgaag-agctgctggaggatgttcttgga 389

                                                                       
Query: 121 ggcaaggacgccctcgccgcgttccgggagtccgacgagaagggctacctcgaagtcgag 180
           ||||| || ||||||   || |||||||| ||||||   || ||||||||||||||||||
Sbjct: 390 ggcaaagatgccctcaatgctttccgggaatccgacctcaacggctacctcgaagtcgag 449

                                                                       
Query: 181 accgaggggctgaagcagctcacgtccatgggcagcctggtgctctgctgcggcgatggc 240
           || || || ||||| |||||||| |||||||||||||| ||||| ||||| || ||||| 
Sbjct: 450 actgaaggcctgaaacagctcacctccatgggcagcctcgtgctttgctgtggggatggt 509

                                                                       
Query: 241 gccgtcatgaactccaccaacctggggctgctgaggcatggagtctccatctggatcgac 300
           || ||||||||||| ||||| || ||||| |||||||||||||||||||| ||||| || 
Sbjct: 510 gctgtcatgaactcaaccaatctagggctactgaggcatggagtctccatttggattgat 569

                                                
Query: 301 gtcccgcttgaattagccgtgaatgacatgttgaaga 337
            | || || ||||| |  |||||||| ||||||||||
Sbjct: 570 attcctctggaattggtggtgaatgatatgttgaaga 606



 Score =  178 bits (90), Expect = 1e-41
 Identities = 203/238 (85%), Gaps = 2/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 351 agctatttcagaccctgattccttttctcaggcaatg-gcaaagctccgtcagcgttatg 409
           ||||| |||||||||||||||||||||| |||||||| ||| || |||| |||||  | |
Sbjct: 611 agctacttcagaccctgattccttttctgaggcaatgagcagag-tccgacagcgacacg 669

                                                                       
Query: 410 atgatctgaaggagcgctatgcagtttctgatgttactgtttcactacagaatgtggctt 469
           |||| || || |||||||||| |||||||||| | ||||||||| |||| |||||||| |
Sbjct: 670 atgaactaaaagagcgctatggagtttctgatataactgtttcagtacaaaatgtggcat 729

                                                                       
Query: 470 ctcagctaggctacagcagcatcgactctttgagcctggaggacatggtcgttgagattg 529
           |||| || |||||||| |||||||||||  ||| ||| |||||||||||| |||||||||
Sbjct: 730 ctcaactgggctacagtagcatcgactcagtgaccctagaggacatggtccttgagattg 789

                                                                     
Query: 530 tgagtcggattgagaagctgatccaagcaaaggcaatgatggaagctgctgggaagcc 587
           |||| |  || |||| |||||||| ||| ||| | |||||||||||||||||||||||
Sbjct: 790 tgaggcaaatagagaggctgatccgagcgaagtcgatgatggaagctgctgggaagcc 847

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>dbj|AK064812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E05, full
           insert sequence
          Length = 1125

 Score =  188 bits (95), Expect = 1e-44
 Identities = 278/337 (82%), Gaps = 3/337 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cccatctacatcgtcgggnacggnactgcaatgccaagcgcaacatcgccaagctgctcg 60
           |||||||||||||||||   ||  |||| | ||||||||||||||| || ||||| || |
Sbjct: 272 cccatctacatcgtcggaaccg--actgtactgccaagcgcaacattgcaaagctccttg 329

                                                                       
Query: 61  ccaactccatcatttaccgctacctctgcagcgaggnacctgctcgaggacgtcctcggc 120
           |||| |||||||| ||||||||||||||||| || | | ||||| ||||| || || || 
Sbjct: 330 ccaattccatcatataccgctacctctgcagtgaag-agctgctggaggatgttcttgga 388

                                                                       
Query: 121 ggcaaggacgccctcgccgcgttccgggagtccgacgagaagggctacctcgaagtcgag 180
           ||||| || ||||||   || |||||||| ||||||   || ||||||||||||||||||
Sbjct: 389 ggcaaagatgccctcaatgctttccgggaatccgacctcaacggctacctcgaagtcgag 448

                                                                       
Query: 181 accgaggggctgaagcagctcacgtccatgggcagcctggtgctctgctgcggcgatggc 240
           || || || ||||| |||||||| |||||||||||||| ||||| ||||| || ||||| 
Sbjct: 449 actgaaggcctgaaacagctcacctccatgggcagcctcgtgctttgctgtggggatggt 508

                                                                       
Query: 241 gccgtcatgaactccaccaacctggggctgctgaggcatggagtctccatctggatcgac 300
           || ||||||||||| ||||| || ||||| |||||||||||||||||||| ||||| || 
Sbjct: 509 gctgtcatgaactcaaccaatctagggctactgaggcatggagtctccatttggattgat 568

                                                
Query: 301 gtcccgcttgaattagccgtgaatgacatgttgaaga 337
            | || || ||||| |  |||||||| ||||||||||
Sbjct: 569 attcctctggaattggtggtgaatgatatgttgaaga 605



 Score =  178 bits (90), Expect = 1e-41
 Identities = 203/238 (85%), Gaps = 2/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 351 agctatttcagaccctgattccttttctcaggcaatg-gcaaagctccgtcagcgttatg 409
           ||||| |||||||||||||||||||||| |||||||| ||| || |||| |||||  | |
Sbjct: 610 agctacttcagaccctgattccttttctgaggcaatgagcagag-tccgacagcgacacg 668

                                                                       
Query: 410 atgatctgaaggagcgctatgcagtttctgatgttactgtttcactacagaatgtggctt 469
           |||| || || |||||||||| |||||||||| | ||||||||| |||| |||||||| |
Sbjct: 669 atgaactaaaagagcgctatggagtttctgatataactgtttcagtacaaaatgtggcat 728

                                                                       
Query: 470 ctcagctaggctacagcagcatcgactctttgagcctggaggacatggtcgttgagattg 529
           |||| || |||||||| |||||||||||  ||| ||| |||||||||||| |||||||||
Sbjct: 729 ctcaactgggctacagtagcatcgactcagtgaccctagaggacatggtccttgagattg 788

                                                                     
Query: 530 tgagtcggattgagaagctgatccaagcaaaggcaatgatggaagctgctgggaagcc 587
           |||| |  || |||| |||||||| ||| ||| | |||||||||||||||||||||||
Sbjct: 789 tgaggcaaatagagaggctgatccgagcgaagtcgatgatggaagctgctgggaagcc 846

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>dbj|AK062086.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-G05, full
           insert sequence
          Length = 456

 Score =  151 bits (76), Expect = 3e-33
 Identities = 186/220 (84%), Gaps = 2/220 (0%)
 Strand = Plus / Plus

                                                                       
Query: 369 ttccttttctcaggcaatg-gcaaagctccgtcagcgttatgatgatctgaaggagcgct 427
           |||||||||| |||||||| ||| || |||| |||||  | ||||| || || |||||||
Sbjct: 1   ttccttttctgaggcaatgagcagag-tccgacagcgacacgatgaactaaaagagcgct 59

                                                                       
Query: 428 atgcagtttctgatgttactgtttcactacagaatgtggcttctcagctaggctacagca 487
           ||| |||||||||| | ||||||||| |||| |||||||| ||||| || |||||||| |
Sbjct: 60  atggagtttctgatataactgtttcagtacaaaatgtggcatctcaactgggctacagta 119

                                                                       
Query: 488 gcatcgactctttgagcctggaggacatggtcgttgagattgtgagtcggattgagaagc 547
           ||||||||||  ||| ||| |||||||||||| ||||||||||||| |  || |||| ||
Sbjct: 120 gcatcgactcagtgaccctagaggacatggtccttgagattgtgaggcaaatagagaggc 179

                                                   
Query: 548 tgatccaagcaaaggcaatgatggaagctgctgggaagcc 587
           |||||| ||| ||| | |||||||||||||||||||||||
Sbjct: 180 tgatccgagcgaagtcgatgatggaagctgctgggaagcc 219

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 123/149 (82%), Gaps = 1/149 (0%)
 Strand = Plus / Plus

                                                                          
Query: 32     tgccaagcgcaacatcgccaagctgctcgccaactccatcatttaccgctacctctgcag 91
              ||||||||||||||| || ||||| || ||||| |||||||| |||||||||||||||||
Sbjct: 145192 tgccaagcgcaacattgcaaagctccttgccaattccatcatataccgctacctctgcag 145251

                                                                          
Query: 92     cgaggnacctgctcgaggacgtcctcggcggcaaggacgccctcgccgcgttccgggagt 151
               || | | ||||| ||||| || || || ||||| || ||||||   || |||||||| |
Sbjct: 145252 tgaag-agctgctggaggatgttcttggaggcaaagatgccctcaatgctttccgggaat 145310

                                           
Query: 152    ccgacgagaagggctacctcgaagtcgag 180
              |||||   || ||||||||||||||||||
Sbjct: 145311 ccgacctcaacggctacctcgaagtcgag 145339



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                          
Query: 190    ctgaagcagctcacgtccatgggcagcctggtgctctgctgcggcgatggcgccgtcatg 249
              ||||| |||||||| |||||||||||||| ||||| ||||| || ||||| || ||||||
Sbjct: 145459 ctgaaacagctcacctccatgggcagcctcgtgctttgctgtggggatggtgctgtcatg 145518

                         
Query: 250    aactccaccaa 260
              ||||| |||||
Sbjct: 145519 aactcaaccaa 145529



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                          
Query: 461    atgtggcttctcagctaggctacagcagcatcgactctttgagcctggaggacatggtcg 520
              ||||||| ||||| || |||||||| |||||||||||  ||| ||| |||||||||||| 
Sbjct: 146311 atgtggcatctcaactgggctacagtagcatcgactcagtgaccctagaggacatggtcc 146370

                   
Query: 521    ttgag 525
              |||||
Sbjct: 146371 ttgag 146375



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                          
Query: 524    agattgtgagtcggattgagaagctgatccaagcaaaggcaatgatggaagctgctggga 583
              |||||||||| |  || |||| |||||||| ||| ||| | |||||||||||||||||||
Sbjct: 146505 agattgtgaggcaaatagagaggctgatccgagcgaagtcgatgatggaagctgctggga 146564

                  
Query: 584    agcc 587
              ||||
Sbjct: 146565 agcc 146568



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                          
Query: 265    gggctgctgaggcatggagtctccatctggatcgacgtcccgcttgaattagccgtgaat 324
              ||||| |||||||||||||||||||| ||||| ||  | || || ||||| |  ||||||
Sbjct: 145612 gggctactgaggcatggagtctccatttggattgatattcctctggaattggtggtgaat 145671

                           
Query: 325    gacatgttgaaga 337
              || ||||||||||
Sbjct: 145672 gatatgttgaaga 145684



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 102      gctcgaggacgtcctcggcggcaaggac 129
                |||||| |||||||||||||||||||||
Sbjct: 21339016 gctcgacgacgtcctcggcggcaaggac 21338989



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 351    agctatttcagaccctgattccttttct 378
              ||||| ||||||||||||||||||||||
Sbjct: 145689 agctacttcagaccctgattccttttct 145716

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>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0672D08
          Length = 173729

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 123/149 (82%), Gaps = 1/149 (0%)
 Strand = Plus / Plus

                                                                          
Query: 32     tgccaagcgcaacatcgccaagctgctcgccaactccatcatttaccgctacctctgcag 91
              ||||||||||||||| || ||||| || ||||| |||||||| |||||||||||||||||
Sbjct: 142994 tgccaagcgcaacattgcaaagctccttgccaattccatcatataccgctacctctgcag 143053

                                                                          
Query: 92     cgaggnacctgctcgaggacgtcctcggcggcaaggacgccctcgccgcgttccgggagt 151
               || | | ||||| ||||| || || || ||||| || ||||||   || |||||||| |
Sbjct: 143054 tgaag-agctgctggaggatgttcttggaggcaaagatgccctcaatgctttccgggaat 143112

                                           
Query: 152    ccgacgagaagggctacctcgaagtcgag 180
              |||||   || ||||||||||||||||||
Sbjct: 143113 ccgacctcaacggctacctcgaagtcgag 143141



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                          
Query: 190    ctgaagcagctcacgtccatgggcagcctggtgctctgctgcggcgatggcgccgtcatg 249
              ||||| |||||||| |||||||||||||| ||||| ||||| || ||||| || ||||||
Sbjct: 143261 ctgaaacagctcacctccatgggcagcctcgtgctttgctgtggggatggtgctgtcatg 143320

                         
Query: 250    aactccaccaa 260
              ||||| |||||
Sbjct: 143321 aactcaaccaa 143331



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                          
Query: 461    atgtggcttctcagctaggctacagcagcatcgactctttgagcctggaggacatggtcg 520
              ||||||| ||||| || |||||||| |||||||||||  ||| ||| |||||||||||| 
Sbjct: 144113 atgtggcatctcaactgggctacagtagcatcgactcagtgaccctagaggacatggtcc 144172

                   
Query: 521    ttgag 525
              |||||
Sbjct: 144173 ttgag 144177



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                          
Query: 524    agattgtgagtcggattgagaagctgatccaagcaaaggcaatgatggaagctgctggga 583
              |||||||||| |  || |||| |||||||| ||| ||| | |||||||||||||||||||
Sbjct: 144307 agattgtgaggcaaatagagaggctgatccgagcgaagtcgatgatggaagctgctggga 144366

                  
Query: 584    agcc 587
              ||||
Sbjct: 144367 agcc 144370



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                          
Query: 265    gggctgctgaggcatggagtctccatctggatcgacgtcccgcttgaattagccgtgaat 324
              ||||| |||||||||||||||||||| ||||| ||  | || || ||||| |  ||||||
Sbjct: 143414 gggctactgaggcatggagtctccatttggattgatattcctctggaattggtggtgaat 143473

                           
Query: 325    gacatgttgaaga 337
              || ||||||||||
Sbjct: 143474 gatatgttgaaga 143486



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 351    agctatttcagaccctgattccttttct 378
              ||||| ||||||||||||||||||||||
Sbjct: 143491 agctacttcagaccctgattccttttct 143518

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>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0455C04
          Length = 147940

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 123/149 (82%), Gaps = 1/149 (0%)
 Strand = Plus / Plus

                                                                         
Query: 32    tgccaagcgcaacatcgccaagctgctcgccaactccatcatttaccgctacctctgcag 91
             ||||||||||||||| || ||||| || ||||| |||||||| |||||||||||||||||
Sbjct: 93738 tgccaagcgcaacattgcaaagctccttgccaattccatcatataccgctacctctgcag 93797

                                                                         
Query: 92    cgaggnacctgctcgaggacgtcctcggcggcaaggacgccctcgccgcgttccgggagt 151
              || | | ||||| ||||| || || || ||||| || ||||||   || |||||||| |
Sbjct: 93798 tgaag-agctgctggaggatgttcttggaggcaaagatgccctcaatgctttccgggaat 93856

                                          
Query: 152   ccgacgagaagggctacctcgaagtcgag 180
             |||||   || ||||||||||||||||||
Sbjct: 93857 ccgacctcaacggctacctcgaagtcgag 93885



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 190   ctgaagcagctcacgtccatgggcagcctggtgctctgctgcggcgatggcgccgtcatg 249
             ||||| |||||||| |||||||||||||| ||||| ||||| || ||||| || ||||||
Sbjct: 94005 ctgaaacagctcacctccatgggcagcctcgtgctttgctgtggggatggtgctgtcatg 94064

                        
Query: 250   aactccaccaa 260
             ||||| |||||
Sbjct: 94065 aactcaaccaa 94075



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 461   atgtggcttctcagctaggctacagcagcatcgactctttgagcctggaggacatggtcg 520
             ||||||| ||||| || |||||||| |||||||||||  ||| ||| |||||||||||| 
Sbjct: 94857 atgtggcatctcaactgggctacagtagcatcgactcagtgaccctagaggacatggtcc 94916

                  
Query: 521   ttgag 525
             |||||
Sbjct: 94917 ttgag 94921



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                         
Query: 524   agattgtgagtcggattgagaagctgatccaagcaaaggcaatgatggaagctgctggga 583
             |||||||||| |  || |||| |||||||| ||| ||| | |||||||||||||||||||
Sbjct: 95051 agattgtgaggcaaatagagaggctgatccgagcgaagtcgatgatggaagctgctggga 95110

                 
Query: 584   agcc 587
             ||||
Sbjct: 95111 agcc 95114



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                         
Query: 265   gggctgctgaggcatggagtctccatctggatcgacgtcccgcttgaattagccgtgaat 324
             ||||| |||||||||||||||||||| ||||| ||  | || || ||||| |  ||||||
Sbjct: 94158 gggctactgaggcatggagtctccatttggattgatattcctctggaattggtggtgaat 94217

                          
Query: 325   gacatgttgaaga 337
             || ||||||||||
Sbjct: 94218 gatatgttgaaga 94230



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 351   agctatttcagaccctgattccttttct 378
             ||||| ||||||||||||||||||||||
Sbjct: 94235 agctacttcagaccctgattccttttct 94262

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>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0402A09
          Length = 141966

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 123/149 (82%), Gaps = 1/149 (0%)
 Strand = Plus / Plus

                                                                          
Query: 32     tgccaagcgcaacatcgccaagctgctcgccaactccatcatttaccgctacctctgcag 91
              ||||||||||||||| || ||||| || ||||| |||||||| |||||||||||||||||
Sbjct: 130122 tgccaagcgcaacattgcaaagctccttgccaattccatcatataccgctacctctgcag 130181

                                                                          
Query: 92     cgaggnacctgctcgaggacgtcctcggcggcaaggacgccctcgccgcgttccgggagt 151
               || | | ||||| ||||| || || || ||||| || ||||||   || |||||||| |
Sbjct: 130182 tgaag-agctgctggaggatgttcttggaggcaaagatgccctcaatgctttccgggaat 130240

                                           
Query: 152    ccgacgagaagggctacctcgaagtcgag 180
              |||||   || ||||||||||||||||||
Sbjct: 130241 ccgacctcaacggctacctcgaagtcgag 130269



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                          
Query: 190    ctgaagcagctcacgtccatgggcagcctggtgctctgctgcggcgatggcgccgtcatg 249
              ||||| |||||||| |||||||||||||| ||||| ||||| || ||||| || ||||||
Sbjct: 130389 ctgaaacagctcacctccatgggcagcctcgtgctttgctgtggggatggtgctgtcatg 130448

                         
Query: 250    aactccaccaa 260
              ||||| |||||
Sbjct: 130449 aactcaaccaa 130459



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                          
Query: 461    atgtggcttctcagctaggctacagcagcatcgactctttgagcctggaggacatggtcg 520
              ||||||| ||||| || |||||||| |||||||||||  ||| ||| |||||||||||| 
Sbjct: 131241 atgtggcatctcaactgggctacagtagcatcgactcagtgaccctagaggacatggtcc 131300

                   
Query: 521    ttgag 525
              |||||
Sbjct: 131301 ttgag 131305



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                          
Query: 524    agattgtgagtcggattgagaagctgatccaagcaaaggcaatgatggaagctgctggga 583
              |||||||||| |  || |||| |||||||| ||| ||| | |||||||||||||||||||
Sbjct: 131435 agattgtgaggcaaatagagaggctgatccgagcgaagtcgatgatggaagctgctggga 131494

                  
Query: 584    agcc 587
              ||||
Sbjct: 131495 agcc 131498



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                          
Query: 265    gggctgctgaggcatggagtctccatctggatcgacgtcccgcttgaattagccgtgaat 324
              ||||| |||||||||||||||||||| ||||| ||  | || || ||||| |  ||||||
Sbjct: 130542 gggctactgaggcatggagtctccatttggattgatattcctctggaattggtggtgaat 130601

                           
Query: 325    gacatgttgaaga 337
              || ||||||||||
Sbjct: 130602 gatatgttgaaga 130614



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 351    agctatttcagaccctgattccttttct 378
              ||||| ||||||||||||||||||||||
Sbjct: 130619 agctacttcagaccctgattccttttct 130646

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>ref|NM_193526.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1575

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 102  gctcgaggacgtcctcggcggcaaggac 129
            |||||| |||||||||||||||||||||
Sbjct: 1047 gctcgacgacgtcctcggcggcaaggac 1074

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>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0496H05
          Length = 147817

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 102   gctcgaggacgtcctcggcggcaaggac 129
             |||||| |||||||||||||||||||||
Sbjct: 60954 gctcgacgacgtcctcggcggcaaggac 60927

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>dbj|AK069494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025F12, full
            insert sequence
          Length = 1939

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 102  gctcgaggacgtcctcggcggcaaggac 129
            |||||| |||||||||||||||||||||
Sbjct: 1162 gctcgacgacgtcctcggcggcaaggac 1189

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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 117     cggcggcaaggacgccctcgccg 139
               |||||||||||||||||||||||
Sbjct: 3291635 cggcggcaaggacgccctcgccg 3291657

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>gb|AC007307.77| Mus musculus strain RIII clone mgsriii-p1_7 map 6, complete sequence
          Length = 83612

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 564   aatgatggaagctgctgggaag 585
             ||||||||||||||||||||||
Sbjct: 62816 aatgatggaagctgctgggaag 62837



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 564   aatgatggaagctgctgggaag 585
             ||||||||||||||||||||||
Sbjct: 32249 aatgatggaagctgctgggaag 32270



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 566   tgatggaagctgctgggaag 585
             ||||||||||||||||||||
Sbjct: 17795 tgatggaagctgctgggaag 17814

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>gb|AE007259.1| Sinorhizobium meliloti 1021 plasmid pSymA section 65 of 121 of the
            complete plasmid sequence
          Length = 10995

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   aacatcgccaagctgctcgcc 62
            |||||||||||||||||||||
Sbjct: 4821 aacatcgccaagctgctcgcc 4801

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>gb|AF228730.8| Homo sapiens chromosome 8 clones SCb-332a23, CTB-415D8 map p23.1,
              complete sequences
          Length = 295854

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 469    tctcagctaggctacagcagc 489
              |||||||||||||||||||||
Sbjct: 110904 tctcagctaggctacagcagc 110924

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>ref|XM_745769.1| Aspergillus fumigatus Af293 cytochrome P450 (Afu6g09730) partial
           mRNA
          Length = 1515

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 38  gcgcaacatcgccaagctgctcgcc 62
           |||||| ||||||||||||||||||
Sbjct: 714 gcgcaagatcgccaagctgctcgcc 738

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>gb|AY838877.1| Aspergillus fumigatus putative gliotoxin biosynthetic gene cluster,
            complete sequence
          Length = 27768

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 38   gcgcaacatcgccaagctgctcgcc 62
            |||||| ||||||||||||||||||
Sbjct: 3346 gcgcaagatcgccaagctgctcgcc 3370

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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 108     ggacgtcctcggcggcaaggacgccctcg 136
               |||||||||||||||||| | ||||||||
Sbjct: 4481680 ggacgtcctcggcggcaaagtcgccctcg 4481652

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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 99      cctgctcgaggacgtcctcggcggc 123
               ||||||||||| |||||||||||||
Sbjct: 3835103 cctgctcgaggtcgtcctcggcggc 3835127

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>gb|AY398394.1| Danio rerio clone RK075A2E10 poly(rC) binding protein 2 (PCBP2) mRNA,
            complete cds
          Length = 2176

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 429  tgcagtttctgatgttactg 448
            ||||||||||||||||||||
Sbjct: 1722 tgcagtttctgatgttactg 1741

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>gb|U61955.1| Caenorhabditis elegans cosmid M03D4, complete sequence
          Length = 38750

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 443  ttactgtttcactacagaat 462
            ||||||||||||||||||||
Sbjct: 6208 ttactgtttcactacagaat 6189

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>gb|BC052337.1| Mus musculus T-cell leukemia/lymphoma 1B, 1, mRNA (cDNA clone
           MGC:60528 IMAGE:30053367), complete cds
          Length = 1079

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 566 tgatggaagctgctgggaag 585
           ||||||||||||||||||||
Sbjct: 450 tgatggaagctgctgggaag 469

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>gb|BC021294.2| Homo sapiens calcium homeostasis endoplasmic reticulum protein, mRNA
            (cDNA clone MGC:29449 IMAGE:4053575), complete cds
          Length = 4105

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gtccatgggcagcctggtgc 223
            ||||||||||||||||||||
Sbjct: 3831 gtccatgggcagcctggtgc 3850

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>ref|NM_013773.1| Mus musculus T-cell leukemia/lymphoma 1B, 1 (Tcl1b1), mRNA
          Length = 1040

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 566 tgatggaagctgctgggaag 585
           ||||||||||||||||||||
Sbjct: 414 tgatggaagctgctgggaag 433

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>ref|NM_006387.4| Homo sapiens calcium homeostasis endoplasmic reticulum protein
            (CHERP), mRNA
          Length = 4105

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gtccatgggcagcctggtgc 223
            ||||||||||||||||||||
Sbjct: 3831 gtccatgggcagcctggtgc 3850

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>gb|AC124777.4| Mus musculus BAC clone RP23-90I17 from chromosome 12, complete sequence
          Length = 248983

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 566    tgatggaagctgctgggaag 585
              ||||||||||||||||||||
Sbjct: 140861 tgatggaagctgctgggaag 140842

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>gb|AC127322.4| Mus musculus BAC clone RP23-238A8 from chromosome 6, complete sequence
          Length = 179698

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 436    tctgatgttactgtttcact 455
              ||||||||||||||||||||
Sbjct: 121854 tctgatgttactgtttcact 121835

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>gb|AC011726.11| Homo sapiens chromosome , clone RP11-14I17, complete sequence
          Length = 170074

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    tgaatgacatgttgaagagc 339
              ||||||||||||||||||||
Sbjct: 150802 tgaatgacatgttgaagagc 150821

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>gb|AC161059.4| Mus musculus BAC clone RP23-82L9 from chromosome 6, complete sequence
          Length = 294389

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 436    tctgatgttactgtttcact 455
              ||||||||||||||||||||
Sbjct: 285173 tctgatgttactgtttcact 285154

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>gb|AC008764.9| Homo sapiens chromosome 19 clone CTD-3222D19, complete sequence
          Length = 172562

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   gtccatgggcagcctggtgc 223
             ||||||||||||||||||||
Sbjct: 65380 gtccatgggcagcctggtgc 65361

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>emb|CR602259.1| full-length cDNA clone CS0DC023YM19 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 2125

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gtccatgggcagcctggtgc 223
            ||||||||||||||||||||
Sbjct: 1912 gtccatgggcagcctggtgc 1931

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>dbj|AK136181.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420471I21 product:T-cell
           leukemia/lymphoma 1B, 1, full insert sequence
          Length = 1039

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 566 tgatggaagctgctgggaag 585
           ||||||||||||||||||||
Sbjct: 430 tgatggaagctgctgggaag 449

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>ref|NM_201192.1| Danio rerio poly(rC) binding protein 2 (pcbp2), mRNA
          Length = 2176

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 429  tgcagtttctgatgttactg 448
            ||||||||||||||||||||
Sbjct: 1730 tgcagtttctgatgttactg 1749

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>gb|U94836.2|HSU94836 Homo sapiens ERPROT 213-21 mRNA, complete cds
          Length = 3990

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gtccatgggcagcctggtgc 223
            ||||||||||||||||||||
Sbjct: 3748 gtccatgggcagcctggtgc 3767

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>gb|AF536542.1| Homo sapiens SR-related CTD associated factor 6 (SCAF6) mRNA,
            complete cds
          Length = 4061

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gtccatgggcagcctggtgc 223
            ||||||||||||||||||||
Sbjct: 3813 gtccatgggcagcctggtgc 3832

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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 39      cgcaacatcgccaagctgct 58
               ||||||||||||||||||||
Sbjct: 2686842 cgcaacatcgccaagctgct 2686823

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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 131    ccctcgccgcgttccgggagtccg 154
              |||||||||| |||||||||||||
Sbjct: 822571 ccctcgccgccttccgggagtccg 822594



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 100    ctgctcgaggacgtcctcggcggc 123
              |||||||||||||| |||||||||
Sbjct: 404419 ctgctcgaggacgtgctcggcggc 404442

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>dbj|AK026145.1| Homo sapiens cDNA: FLJ22492 fis, clone HRC11045, highly similar to
           HSU94836 Human ERPROT 213-21 mRNA
          Length = 1464

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 gtccatgggcagcctggtgc 223
           ||||||||||||||||||||
Sbjct: 967 gtccatgggcagcctggtgc 948

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>gb|AF195488.1|AF195488 Mus musculus T-cell leukemia protein Tcl1b1 mRNA, complete cds
          Length = 1040

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 566 tgatggaagctgctgggaag 585
           ||||||||||||||||||||
Sbjct: 414 tgatggaagctgctgggaag 433

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>gb|BC066603.1| Danio rerio poly(rC) binding protein 2, mRNA (cDNA clone MGC:77206
            IMAGE:6962205), complete cds
          Length = 2154

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 429  tgcagtttctgatgttactg 448
            ||||||||||||||||||||
Sbjct: 1701 tgcagtttctgatgttactg 1720

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>gb|BC045508.1| Danio rerio poly(rC) binding protein 2, mRNA (cDNA clone MGC:55964
            IMAGE:3819411), complete cds
          Length = 2176

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 429  tgcagtttctgatgttactg 448
            ||||||||||||||||||||
Sbjct: 1730 tgcagtttctgatgttactg 1749

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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 41     caacatcgccaagctgctcgccaa 64
              |||||||| |||||||||||||||
Sbjct: 266947 caacatcggcaagctgctcgccaa 266924

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>dbj|AB209730.1| Homo sapiens mRNA for calcium homeostasis endoplasmic reticulum
            protein variant protein
          Length = 2472

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gtccatgggcagcctggtgc 223
            ||||||||||||||||||||
Sbjct: 2223 gtccatgggcagcctggtgc 2242

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>dbj|AP006119.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT45C16, TM0203,
             complete sequence
          Length = 110764

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 428   atgcagtttctgatgttactgttt 451
             |||||||| |||||||||||||||
Sbjct: 51155 atgcagttgctgatgttactgttt 51132

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>dbj|AB041839.1| Oryza sativa (indica cultivar-group) Hd1 gene, complete cds,
            strain:Kasalath
          Length = 4793

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  cgtcctcggcggcaaggacg 130
            ||||||||||||||||||||
Sbjct: 1732 cgtcctcggcggcaaggacg 1751


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,444,775
Number of Sequences: 3902068
Number of extensions: 4444775
Number of successful extensions: 83644
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82940
Number of HSP's gapped (non-prelim): 693
length of query: 615
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 592
effective length of database: 17,143,297,704
effective search space: 10148832240768
effective search space used: 10148832240768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result