Clone Name | baalm17 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | EFG_AZOSE (Q5P335) Elongation factor G (EF-G) | 30 | 3.6 | 2 | EME1_SCHPO (Q9C103) Crossover junction endonuclease eme1 (EC 3.1... | 30 | 4.7 | 3 | Y4DW_RHISN (P55422) Hypothetical 22.9 kDa protein y4dW | 29 | 6.1 | 4 | YD73_SCHPO (Q10328) Putative homeobox protein C32A11.03c in chro... | 29 | 7.9 | 5 | CTTB2_CALJA (Q2QLF8) Cortactin-binding protein 2 (CortBP2) | 29 | 7.9 |
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>EFG_AZOSE (Q5P335) Elongation factor G (EF-G)| Length = 698 Score = 30.0 bits (66), Expect = 3.6 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +1 Query: 103 RASPRTESRQMAIVPEVHQDAVGKVLFDAEENGELRGRRGVLFIVDE 243 +ASP MA+V E +D +G V+ G+L GRRG++ +D+ Sbjct: 601 KASPVLLEPMMAVVVETPEDYMGNVM------GDLSGRRGIVQGMDD 641
>EME1_SCHPO (Q9C103) Crossover junction endonuclease eme1 (EC 3.1.22.-)| (Essential meiotic endonuclease 1) Length = 738 Score = 29.6 bits (65), Expect = 4.7 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = -1 Query: 297 DTPPRSTKCTAATR-FPLILVDDEEDTSPPSELSVLLGVEKNLPDSVLVYL 148 DTP RST+C + + F LV ED P ++ + +K++ D++L+ L Sbjct: 47 DTPQRSTQCDSLLKSFSTPLVSGSEDVLPSPRDALNITNKKSVTDNLLLSL 97
>Y4DW_RHISN (P55422) Hypothetical 22.9 kDa protein y4dW| Length = 204 Score = 29.3 bits (64), Expect = 6.1 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -3 Query: 190 RRRKEPSRQRPGVPQERWPSAGSLCAAMRALLP 92 ++RK R RP +P+E+WP+ +A A +P Sbjct: 154 QKRKRGYRPRPSLPKEKWPAEAEHESATSAPVP 186
>YD73_SCHPO (Q10328) Putative homeobox protein C32A11.03c in chromosome I| Length = 942 Score = 28.9 bits (63), Expect = 7.9 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = -1 Query: 288 PRSTKCT-AATRFPLILVDDEEDTSPPSELSVLLGVEKNLPD-SVLVYLRNDGHLPALCA 115 P+S K A + +L + +DT+PP + +G E N+P+ SV ++ +N L + Sbjct: 166 PKSKKQRLTADQLAYLLREFSKDTNPPPAIREKIGRELNIPERSVTIWFQNRRAKSKLIS 225 Query: 114 RR 109 RR Sbjct: 226 RR 227
>CTTB2_CALJA (Q2QLF8) Cortactin-binding protein 2 (CortBP2)| Length = 1662 Score = 28.9 bits (63), Expect = 7.9 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 8/55 (14%) Frame = +3 Query: 222 CPLHR------RRGLEGSAWPPCISSNAAACPVPK--SALWRSMWTRTRQLAGRF 362 CPL R R +G ++P I S+ +C K S WR + T R+ +GRF Sbjct: 1414 CPLPRAELEQHRADFKGGSFPLSIVSSYNSCSKKKGESGAWRKVNTSPRRKSGRF 1468 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,368,949 Number of Sequences: 219361 Number of extensions: 1118385 Number of successful extensions: 3687 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3592 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3683 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)