>UMP1_ARATH (Q9LKA5) Unknown mitochondrial protein At3g15000|
          Length = 395

 Score = 97.4 bits (241), Expect(2) = 6e-27
 Identities = 49/91 (53%), Positives = 53/91 (58%)
 Frame = +2

Query: 71  KXLPKVRWVLPDSYLDVRNKDYGGEPFIDGQAVPYDPKYHEEWVXXXXXXXXXXXXXXXX 250
           K L  VRWVLPDSYLDVRNKDYGGEPFIDG+AVPYDPKYHEEW+                
Sbjct: 162 KELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRP 221

Query: 251 XXXXXXXXXERRRENTQAYQSGPAPPGQSQM 343
                    ERRREN     +G  PP +  M
Sbjct: 222 RNNDRSRNFERRREN----MAGGPPPQRPPM 248



 Score = 43.1 bits (100), Expect(2) = 6e-27
 Identities = 20/27 (74%), Positives = 25/27 (92%)
 Frame = +1

Query: 1   YSVSTRHYFAFGALVSEELSYKLKXVA 81
           YSVSTR Y+AFGALVSE+LS+KLK ++
Sbjct: 139 YSVSTRCYYAFGALVSEDLSHKLKELS 165

>DAG_ANTMA (Q38732) DAG protein, chloroplast precursor|
          Length = 230

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 5/43 (11%)
 Frame = +2

Query: 71  KXLPKVRWVLPDSYLDVRNKDYGGEPFIDGQAVP-----YDPK 184
           K LP V WVLPDSY+DV+NKDYGG+ +++G+ +P     Y PK
Sbjct: 152 KGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCQYPTYQPK 194

>LNT_SYNY3 (P74055) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP|
           N-acyltransferase)
          Length = 519

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 29/131 (22%), Positives = 45/131 (34%), Gaps = 33/131 (25%)
 Frame = -1

Query: 613 WAWSILHVTTRITLVALVTSLVPRG-----WG-----------------TLVSRGWGTLV 500
           W W     TTR+    L   L+ R      WG                 T +   W   +
Sbjct: 22  WIWIFRANTTRLNFTQLKQFLISRSLTAIAWGGGFYGVALFWITGVHPLTWLGVPWLASL 81

Query: 499 SRGRRCILIVWSTSWNIARLWVWGMGLVIWWGTRRRWRA----------LWRT-PWRSSI 353
           +    C L +  T+W +  ++VW + + +W  T  R +           LW T  W    
Sbjct: 82  AIAAFCWLAI--TAWGVVLVFVWLLAMAVWEVTTARTKVNSTFKKYLFILWGTASWCGLE 139

Query: 352 MGWHLALPWWS 320
             W  ++ WWS
Sbjct: 140 TLWSHSILWWS 150

>JHD1_USTMA (Q4P5U1) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 669

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = -1

Query: 613 WAWSILHVTTRITLVALVTSLVPRGWGTLVSRGWGTLVSRGRRCILIVWSTSWNIARLW 437
           W    LH  TR+ +    T L+P GW   V     TLV  G       + T WN+A  W
Sbjct: 435 WLGDHLHSLTRVDIGPGETMLIPSGWLHCVYTPKNTLVVGGN------FLTDWNVATQW 487

>SPR2H_MOUSE (O70559) Small proline-rich protein 2H|
          Length = 108

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = +1

Query: 406 PTKLPVPCPKPTGGLCSRRWTKLSECTAAPWIPRCPNPW-IPRCPNPWVPSW*PRLP 573
           P K P PCP P             +CT     P+CP P   P+CP P  P   P+ P
Sbjct: 29  PPKCPEPCPPP-------------KCTEPCPPPKCPEPCPPPKCPEPCPP---PKCP 69

>SPR2B_MOUSE (O70554) Small proline-rich protein 2B|
          Length = 98

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 21/73 (28%), Positives = 22/73 (30%)
 Frame = +1

Query: 334 EPNATP*CCSSKASSTGPATAFGCPTKLPVPCPKPTGGLCSRRWTKLSECTAAPWIPRCP 513
           EP   P CC               P K P PCP P              C   PW P+CP
Sbjct: 34  EPCPPPVCCEPCP-----------PPKCPEPCPPPVCCEPCPPPVCCEPCPPQPWQPKCP 82

Query: 514 NPWIPRCPNPWVP 552
               P C     P
Sbjct: 83  PVQFPPCQQKCPP 95

>SPRR3_MOUSE (O09116) Small proline-rich protein 3 (Cornifin beta)|
          Length = 238

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 492 PLDTKVPQPLDTKVPQPLGTKLVTKATKVIL 584
           P  T VPQP +TK+P+P  TK+      V+L
Sbjct: 41  PCHTDVPQPGNTKIPEPCSTKVPEPGNTVVL 71



 Score = 30.0 bits (66), Expect = 5.8
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 489 RPLDTKVPQPLDTKVPQPLGTKLVTKATKVILVVTCRMDQAQP 617
           +P +TK+P+P  TKVP+P G  +V +     +   C  +  +P
Sbjct: 48  QPGNTKIPEPCSTKVPEP-GNTVVLEPDYTTMPGPCSTNITEP 89

>M3K1_HUMAN (Q13233) Mitogen-activated protein kinase kinase kinase 1 (EC|
           2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1)
           (MEKK 1) (Fragment)
          Length = 1495

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 27/65 (41%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +1

Query: 304 LPERACSTRAEPNATP*CCSSKASSTGPATAFGCPTKL-PVPCPKPTGGLCSRRWTKLSE 480
           LPE+     A P A     SS + S  PA A G  T   PV  P P G   SRR   L+E
Sbjct: 54  LPEQPLFLAASPPA-----SSTSPSPEPADAAGSGTGFQPVAVPPPHGA-ASRRGAHLTE 107

Query: 481 CTAAP 495
             AAP
Sbjct: 108 SVAAP 112

>LIPA_LEIXX (Q6AFG7) Lipoyl synthase (EC 2.8.1.-) (Lipoic acid synthase)|
           (Lipoate synthase) (Lipoyl-acyl-carrier protein
           synthase) (Sulfur insertion protein lipA) (Lip-syn)
          Length = 329

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +2

Query: 17  GIILLLVP*YLRNSPTNSKXLPKVRWVLPDSYLDVRNK 130
           G  ++ +  YLR SP   + LP  RWV PD ++++R++
Sbjct: 240 GTDIITITQYLRPSP---RHLPVARWVRPDEFVELRDE 274

>KE4L_CAEEL (Q9XTQ7) Hypothetical Ke4-like protein H13N06.5 in chromosome X|
          Length = 462

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -3

Query: 476 DSLVHLLEHSPPVGLGHGTGNLVGHPKAVAGPVEDALEEQHHGVAFGSAL 327
           D+ +HL+ H+ P G GHG  +  GH     G    A +    G   G  +
Sbjct: 206 DAFLHLIPHATPAGDGHGHSHSHGHSHGGGGHSHGAHDMSVGGWVLGGII 255

>SCTR_RAT (P23811) Secretin receptor precursor (SCT-R)|
          Length = 449

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 27/99 (27%), Positives = 34/99 (34%), Gaps = 21/99 (21%)
 Frame = +1

Query: 286 KGEHT-GLPERACSTRA-----EPNATP*CCSSKASSTGPATAFGC----------PTKL 417
           K  HT G+P R C  R        +        K  + GP TA GC          P+  
Sbjct: 21  KAAHTVGVPPRLCDVRRVLLEERAHCLQQLSKEKKGALGPETASGCEGLWDNMSCWPSSA 80

Query: 418 P-----VPCPKPTGGLCSRRWTKLSECTAAPWIPRCPNP 519
           P     V CPK    L ++  +    CT   W    P P
Sbjct: 81  PARTVEVQCPKFLLMLSNKNGSLFRNCTQDGWSETFPRP 119

>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)|
          Length = 634

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 493 PWIPRCPNPWIPRCPNPWVP 552
           P IP  P  WIP  P  W+P
Sbjct: 167 PPIPNIPTDWIPNIPTDWIP 186



 Score = 29.3 bits (64), Expect = 10.0
 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +1

Query: 496 WIPRCPNPWIPRCP-NPWVPSW*PRLP 573
           WIP  P  WIP  P  P  P+  P +P
Sbjct: 176 WIPNIPTDWIPDIPEKPTTPATTPNIP 202

>NDC1_DROME (Q9VCG4) Nucleoporin Ndc1|
          Length = 578

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 202 HPLLMVFGVVRNSLSIYKWFSSIVLISDI 116
           HPL  V G +R   S Y WF+SI L++ +
Sbjct: 46  HPLAWVTGTLRLVASWYTWFASIPLVASV 74

>LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late envelope protein|
           18) (Small proline-rich-like epidermal differentiation
           complex protein 5A)
          Length = 118

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/50 (28%), Positives = 19/50 (38%)
 Frame = +1

Query: 307 PERACSTRAEPNATP*CCSSKASSTGPATAFGCPTKLPVPCPKPTGGLCS 456
           P   C+ +  P  TP C         P  +  CP  +   C   +GG CS
Sbjct: 12  PPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGCCS 61

>PRMA_GLOVI (Q7NIP7) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 316

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -1

Query: 412 WWGTRRR-WRALWRTPWRSSIMGWHLAL-PWW 323
           W+   RR W+A WR  WR   +G  L + P W
Sbjct: 101 WYAVERRDWQAAWREQWRPIFVGERLVIWPVW 132

>SPR2G_MOUSE (O70558) Small proline-rich protein 2G|
          Length = 76

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 17/50 (34%), Positives = 20/50 (40%)
 Frame = +1

Query: 406 PTKLPVPCPKPTGGLCSRRWTKLSECTAAPWIPRCPNPWIPRCPNPWVPS 555
           P K P PCP P             +C      P+CP P    CP P +PS
Sbjct: 20  PPKCPEPCPLP-------------KCPEPCPPPKCPEP----CPEPCLPS 52

>SPR1B_MOUSE (Q62267) Cornifin B (Small proline-rich protein 1B) (SPR1B) (SPR1|
           B)
          Length = 153

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = +3

Query: 417 TSPMPQTHRRAMFQEV-----DQTIRMHRRPLDTKVPQPLDTKVPQPLGTK 554
           T+P PQ H + + Q       +  +   + P DTKVP+P   K P+P   K
Sbjct: 11  TAP-PQLHEQQVKQPCQPPPPEPCVSQVKTPCDTKVPEPCHPKAPEPCHPK 60

>IGHG3_HUMAN (P01860) Ig gamma-3 chain C region (Heavy chain disease protein)|
           (HDC)
          Length = 290

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 8/55 (14%)
 Frame = +1

Query: 403 CPTKLPVP-CPKPTGGLCSRRWTKLSECTAAPWIPRCPNPW-------IPRCPNP 543
           C T  P P CP+P              C   P  PRCP P         PRCP P
Sbjct: 33  CDTPPPCPRCPEP------------KSCDTPPPCPRCPEPKSCDTPPPCPRCPAP 75

>SPRR3_HUMAN (Q9UBC9) Small proline-rich protein 3 (Cornifin beta) (Esophagin)|
           (22 kDa pancornulin)
          Length = 169

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 486 RRPLDTKVPQPLDTKVPQPLGTKL 557
           + P  +KVPQP +TK+P+P  TK+
Sbjct: 38  KEPCHSKVPQPGNTKIPEPGCTKV 61

>KPRS3_ORYSA (Q8S2E5) Ribose-phosphate pyrophosphokinase 3 (EC 2.7.6.1)|
           (Phosphoribosyl pyrophosphate synthetase 3)
          Length = 409

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 361 SSKASSTGPATAFGCPTKLPVPCPKPT 441
           +S ++S  PA AFG  T+ P P P P+
Sbjct: 5   ASASASASPAAAFGAKTRRPGPSPSPS 31

>YCGE_ECOLI (P75989) Putative HTH-type transcriptional regulator ycgE|
          Length = 243

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -1

Query: 421 LVIWWGTRRRWRALWRTPWRSSIMGWHLAL 332
           +++ W    R R LW   WR S+ GWH+++
Sbjct: 166 ILMAWNVEERAR-LWLEAWRLSLSGWHISV 194

>SPR1A_MOUSE (Q62266) Cornifin A (Small proline-rich protein 1A) (SPR1A) (SPR1|
           A)
          Length = 144

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 18/72 (25%), Positives = 23/72 (31%)
 Frame = +1

Query: 337 PNATP*CCSSKASSTGPATAFGCPTKLPVPCPKPTGGLCSRRWTKLSECTAAPWIPRCPN 516
           P A   C         P     C  K+P PC       C+ +          P  P+ P 
Sbjct: 58  PKAPEPCHPKAPEPCNPKVPEPCQPKVPEPCQPKVPEPCNPK-------VPEPCQPKAPE 110

Query: 517 PWIPRCPNPWVP 552
           P  P+ P P  P
Sbjct: 111 PCHPKAPEPCHP 122

>FGF6_HUMAN (P10767) Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6)|
           (HST-2)
          Length = 208

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
 Frame = -1

Query: 622 MMGWAWSILHVTTRITLVALVTSLVPRGWGT------LVSRGWGTLVSRGR 488
           + G  W++      + L  LV  +VP   GT      L SRGWGTL+SR R
Sbjct: 18  LQGTLWAL------VFLGILVGMVVPSPAGTRANNTLLDSRGWGTLLSRSR 62

>SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor|
          Length = 217

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 22/70 (31%), Positives = 28/70 (40%)
 Frame = +1

Query: 301 GLPERACSTRAEPNATP*CCSSKASSTGPATAFGCPTKLPVPCPKPTGGLCSRRWTKLSE 480
           G P +A +T A P   P C S+  ++T   T     T    P  KPT   C    T  + 
Sbjct: 27  GCPTKATTTCAPPTK-PTCKSTSTTTTTTTTTTTTTTTTRAPPTKPT---CKSTSTTTTT 82

Query: 481 CTAAPWIPRC 510
             A P  P C
Sbjct: 83  TRAPPTKPTC 92

>SPRR1_RABIT (P35324) Cornifin alpha (Small proline-rich protein I) (SPR-I)|
          Length = 126

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 492 PLDTKVPQPLDTKVPQPLGTK 554
           P  +KVPQP   KVP+P  TK
Sbjct: 104 PCQSKVPQPCQPKVPEPCQTK 124

>MCSP_RAT (Q64298) Sperm mitochondrial-associated cysteine-rich protein|
          Length = 145

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 19/77 (24%), Positives = 24/77 (31%)
 Frame = +1

Query: 307 PERACSTRAEPNATP*CCSSKASSTGPATAFGCPTKLPVPCPKPTGGLCSRRWTKLSECT 486
           P+  C  ++       CC  K+    P     CP   P PCP      C+          
Sbjct: 24  PKPCCLQKSPCCPKSPCCPPKSPCCTPKV---CPCPTPCPCPATCPAACA---------- 70

Query: 487 AAPWIPRCPNPWIPRCP 537
                  CP P  P CP
Sbjct: 71  -------CPCPMKPCCP 80

>SPR2I_MOUSE (O70560) Small proline-rich protein 2I|
          Length = 76

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 15/46 (32%), Positives = 17/46 (36%)
 Frame = +1

Query: 406 PTKLPVPCPKPTGGLCSRRWTKLSECTAAPWIPRCPNPWIPRCPNP 543
           P K P PCP P             +C      P+CP P    CP P
Sbjct: 20  PKKCPEPCPPP-------------QCPEPCPPPKCPEPCPESCPPP 52

>MCH1_ASPFU (Q4WVT3) Probable transporter mch1|
          Length = 619

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
 Frame = -1

Query: 607 WSILHVTTRITLVALVTSLVPRGWGTLVSRGWGTLVSRGR-----RCILIVWSTSWNIAR 443
           W + +  T   +VA+V +     WG + SRG+      G      +C        W    
Sbjct: 535 WGVENFGTNWGIVAMVPAAGAAMWGVIYSRGYQDATDGGNGSPDGQC------HGWRCYG 588

Query: 442 LWVWGMGLVIWWGTRRRWRALWRTPWR 362
            W  G  L +W      W   WR  WR
Sbjct: 589 FWAVGCTLSVWVAV-VAWILAWR-GWR 613

>FGF6_MOUSE (P21658) Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6)|
           (HST-2)
          Length = 208

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 6/37 (16%)
 Frame = -1

Query: 580 ITLVALVTSLVP-----RGWGTLV-SRGWGTLVSRGR 488
           + L  LV  +VP     R  GTL+ SRGWGTL+SR R
Sbjct: 26  VFLGVLVGMVVPSPAGARANGTLLDSRGWGTLLSRSR 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,396,719
Number of Sequences: 219361
Number of extensions: 1936211
Number of successful extensions: 7418
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 6640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7187
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)