ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalm06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK109362.2| Oryza sativa (japonica cultivar-group) cDNA clon... 325 1e-85
2dbj|AK072233.1| Oryza sativa (japonica cultivar-group) cDNA clon... 325 1e-85
3dbj|AK106007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
4dbj|AK098936.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
5gb|AY104285.1| Zea mays PCO088782 mRNA sequence 287 2e-74
6gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome... 155 2e-34
7dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
8dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
9dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
10ref|NM_104204.2| Arabidopsis thaliana unknown protein AT1G53260 ... 78 4e-11
11gb|AY735538.1| Arabidopsis thaliana chromosome 1 hypothetical pr... 78 4e-11
12gb|AY735537.1| Arabidopsis thaliana chromosome 1 hypothetical pr... 78 4e-11
13gb|AY954765.1| Arabidopsis thaliana hypothetical protein (At1g53... 78 4e-11
14ref|NM_112362.2| Arabidopsis thaliana unknown protein AT3G15000 ... 68 4e-08
15gb|BT015868.1| Arabidopsis thaliana At3g15000 mRNA, complete cds 68 4e-08
16gb|AF428427.1|AF428427 Arabidopsis thaliana AT3g15000/K15M2_14 m... 68 4e-08
17emb|BX823328.1|CNS0A5D6 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
18gb|AC008007.7|AC008007 Genomic sequence for Arabidopsis thaliana... 46 0.14
19dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.55
20gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 42 2.2
21emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on ch... 42 2.2
22emb|X82639.1|MRZP3 M.radiata mRNA for zona pellucida glycoprotein-3 42 2.2
23gb|AC092716.7| Mus musculus chromosome 5, clone RP23-14J20, comp... 40 8.6
24gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 8.6
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.6
26gb|AC145387.2| Oryza sativa chromosome 3 BAC OSJNBb0031A14 genom... 40 8.6
27emb|AL109853.4|HSJ765F13 Human DNA sequence from clone RP4-765F1... 40 8.6
28emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segmen... 40 8.6
29dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 8.6
30dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
31gb|AC105068.19| Mus musculus chromosome 5, clone RP23-445H19, co... 40 8.6
32gb|AC095350.8| Homo sapiens 12 BAC RP11-662M24 (Roswell Park Can... 40 8.6

>dbj|AK109362.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E06, full
           insert sequence
          Length = 1353

 Score =  325 bits (164), Expect = 1e-85
 Identities = 264/296 (89%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaactctcc 60
           ||||| ||||||||| ||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 412 tactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaactctcc 471

                                                                       
Query: 61  tacaaactcaaagnagttgcctaaggtccgttgggttcttcctgattcatacctcgatgt 120
           ||||||||||||| ||||||| |||||||| ||||||||||| || ||||| || |||||
Sbjct: 472 tacaaactcaaag-agttgcccaaggtccgctgggttcttccagactcatatctggatgt 530

                                                                       
Query: 121 cagaaataaggactatggaggagaaccatttatagatggacaagctgttccttacgaccc 180
           |||||||||||||||||||||||| || |||||| ||||| ||||||||||||| |||||
Sbjct: 531 cagaaataaggactatggaggagagccttttataaatggagaagctgttccttatgaccc 590

                                                                       
Query: 181 caaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccggcgcaa 240
            || ||||||||||||||||||||||||||||| ||||||||||| ||  |||| |||||
Sbjct: 591 taagtaccatgaggagtgggtgagaaacaatgcacgtgccaatgaaaggacccgacgcaa 650

                                                                   
Query: 241 cgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaaca 296
            || |||||| | |||||||||||||| ||||| || || ||||||||||||||||
Sbjct: 651 tgataggcctagaaactttgacaggtcaaggaatttcgagaggagaagggagaaca 706



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>dbj|AK072233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001H21, full
           insert sequence
          Length = 1435

 Score =  325 bits (164), Expect = 1e-85
 Identities = 264/296 (89%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaactctcc 60
           ||||| ||||||||| ||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 410 tactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaactctcc 469

                                                                       
Query: 61  tacaaactcaaagnagttgcctaaggtccgttgggttcttcctgattcatacctcgatgt 120
           ||||||||||||| ||||||| |||||||| ||||||||||| || ||||| || |||||
Sbjct: 470 tacaaactcaaag-agttgcccaaggtccgctgggttcttccagactcatatctggatgt 528

                                                                       
Query: 121 cagaaataaggactatggaggagaaccatttatagatggacaagctgttccttacgaccc 180
           |||||||||||||||||||||||| || |||||| ||||| ||||||||||||| |||||
Sbjct: 529 cagaaataaggactatggaggagagccttttataaatggagaagctgttccttatgaccc 588

                                                                       
Query: 181 caaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccggcgcaa 240
            || ||||||||||||||||||||||||||||| ||||||||||| ||  |||| |||||
Sbjct: 589 taagtaccatgaggagtgggtgagaaacaatgcacgtgccaatgaaaggacccgacgcaa 648

                                                                   
Query: 241 cgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaaca 296
            || |||||| | |||||||||||||| ||||| || || ||||||||||||||||
Sbjct: 649 tgataggcctagaaactttgacaggtcaaggaatttcgagaggagaagggagaaca 704



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>dbj|AK106007.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A08, full
           insert sequence
          Length = 1437

 Score =  317 bits (160), Expect = 2e-83
 Identities = 263/296 (88%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaactctcc 60
           ||||| ||||||||| ||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 439 tactcagtgtcaactcggcattactttgcttttggagctcttgtatctgaggaactctcc 498

                                                                       
Query: 61  tacaaactcaaagnagttgcctaaggtccgttgggttcttcctgattcatacctcgatgt 120
           ||||||||||||| ||||||| |||||||| ||||||||||| || |||||||| |||||
Sbjct: 499 tacaaactcaaag-agttgcccaaggtccgctgggttcttccagactcatacctggatgt 557

                                                                       
Query: 121 cagaaataaggactatggaggagaaccatttatagatggacaagctgttccttacgaccc 180
           ||||||||||||||| ||||||||||| |||||| ||||  |||| |||||||| |||||
Sbjct: 558 cagaaataaggactacggaggagaaccttttataaatggggaagccgttccttatgaccc 617

                                                                       
Query: 181 caaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccggcgcaa 240
            || ||||| ||||||||||||||||||||||| ||||||||||| |||  |||||||||
Sbjct: 618 taagtaccacgaggagtgggtgagaaacaatgcgcgtgccaatgaaagaagccggcgcaa 677

                                                                   
Query: 241 cgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaaca 296
            || |||||| | |||||||||||||| ||||| ||||| ||||||||||||||||
Sbjct: 678 tgataggcctagaaactttgacaggtcaaggaattttgagaggagaagggagaaca 733



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>dbj|AK098936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036D20, full
           insert sequence
          Length = 1435

 Score =  317 bits (160), Expect = 2e-83
 Identities = 263/296 (88%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaactctcc 60
           ||||| ||||||||| ||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 410 tactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaactctcc 469

                                                                       
Query: 61  tacaaactcaaagnagttgcctaaggtccgttgggttcttcctgattcatacctcgatgt 120
           ||||||||||||| ||||||| |||||||| ||||||||||| || || || || |||||
Sbjct: 470 tacaaactcaaag-agttgcccaaggtccgctgggttcttccagactcgtatctggatgt 528

                                                                       
Query: 121 cagaaataaggactatggaggagaaccatttatagatggacaagctgttccttacgaccc 180
           |||||||||||||||||||||||| || |||||| ||||| ||||||||||||| |||||
Sbjct: 529 cagaaataaggactatggaggagagccttttataaatggagaagctgttccttatgaccc 588

                                                                       
Query: 181 caaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccggcgcaa 240
            || ||||||||||||||||||||||||||||| ||||||||||| ||  |||| |||||
Sbjct: 589 taagtaccatgaggagtgggtgagaaacaatgcacgtgccaatgaaaggacccgacgcaa 648

                                                                   
Query: 241 cgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaaca 296
            || |||||| | |||||||||||||| ||||| || || ||||||||||||||||
Sbjct: 649 tgataggcctagaaactttgacaggtcaaggaatttcgagaggagaagggagaaca 704



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>gb|AY104285.1| Zea mays PCO088782 mRNA sequence
          Length = 1701

 Score =  287 bits (145), Expect = 2e-74
 Identities = 259/296 (87%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaactctcc 60
           |||||||| || ||| | ||||| ||||  |||||||| || |||||||||||||| || 
Sbjct: 471 tactctgtatcgactcgtcattactttggctttggtgctcttgtatctgaggaactttct 530

                                                                       
Query: 61  tacaaactcaaagnagttgcctaaggtccgttgggttcttcctgattcatacctcgatgt 120
           |||||||| |||| | || || |||||||| ||||||||||||||||||||| | |||||
Sbjct: 531 tacaaactgaaagaaattccc-aaggtccgctgggttcttcctgattcatacttggatgt 589

                                                                       
Query: 121 cagaaataaggactatggaggagaaccatttatagatggacaagctgttccttacgaccc 180
           || ||| |||||||||||||| ||||| || ||| |||| |||||||||||||| || ||
Sbjct: 590 caaaaacaaggactatggaggcgaacccttcataaatgggcaagctgttccttatgatcc 649

                                                                       
Query: 181 caaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccggcgcaa 240
            ||||| |||||||||||||||||||||||||||||||||||||| |||  |||||||||
Sbjct: 650 taaatatcatgaggagtgggtgagaaacaatgcccgtgccaatgacagaaaccggcgcaa 709

                                                                   
Query: 241 cgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaaca 296
            || ||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 710 tgataggcctcgcaactttgacaggtcaaggaactttgacaggagaagggagaaca 765



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>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0094K23, complete sequence
          Length = 167482

 Score =  155 bits (78), Expect = 2e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                         
Query: 139   aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 198
             ||||||||| |||||| ||||  |||| |||||||| ||||| || ||||| ||||||||
Sbjct: 38399 aggagaaccttttataaatggggaagccgttccttatgaccctaagtaccacgaggagtg 38340

                                                                         
Query: 199   ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 258
             ||||||||||||||| ||||||||||| |||  ||||||||| || |||||| | |||||
Sbjct: 38339 ggtgagaaacaatgcgcgtgccaatgaaagaagccggcgcaatgataggcctagaaactt 38280

                                                   
Query: 259   tgacaggtcgaggaactttgaaaggagaagggagaaca 296
             ||||||||| ||||| ||||| ||||||||||||||||
Sbjct: 38279 tgacaggtcaaggaattttgagaggagaagggagaaca 38242



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1     tactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaactctcc 60
             ||||| ||||||||| ||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 39414 tactcagtgtcaactcggcattactttgcttttggagctcttgtatctgaggaactctcc 39355

                          
Query: 61    tacaaactcaaag 73
             |||||||||||||
Sbjct: 39354 tacaaactcaaag 39342



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                         
Query: 75    agttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataaggact 134
             ||||||| |||||||| ||||||||||| || |||||||| |||||||||||||||||||
Sbjct: 39246 agttgcccaaggtccgctgggttcttccagactcatacctggatgtcagaaataaggact 39187

                    
Query: 135   atggagg 141
             | |||||
Sbjct: 39186 acggagg 39180



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  155 bits (78), Expect = 2e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                            
Query: 139      aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 198
                ||||||||| |||||| ||||  |||| |||||||| ||||| || ||||| ||||||||
Sbjct: 19442992 aggagaaccttttataaatggggaagccgttccttatgaccctaagtaccacgaggagtg 19442933

                                                                            
Query: 199      ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 258
                ||||||||||||||| ||||||||||| |||  ||||||||| || |||||| | |||||
Sbjct: 19442932 ggtgagaaacaatgcgcgtgccaatgaaagaagccggcgcaatgataggcctagaaactt 19442873

                                                      
Query: 259      tgacaggtcgaggaactttgaaaggagaagggagaaca 296
                ||||||||| ||||| ||||| ||||||||||||||||
Sbjct: 19442872 tgacaggtcaaggaattttgagaggagaagggagaaca 19442835



 Score =  155 bits (78), Expect = 2e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                           
Query: 139     aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 198
               |||||| || |||||| ||||| ||||||||||||| ||||| || ||||||||||||||
Sbjct: 2437444 aggagagccttttataaatggagaagctgttccttatgaccctaagtaccatgaggagtg 2437385

                                                                           
Query: 199     ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 258
               ||||||||||||||| ||||||||||| ||  |||| ||||| || |||||| | |||||
Sbjct: 2437384 ggtgagaaacaatgcacgtgccaatgaaaggacccgacgcaatgataggcctagaaactt 2437325

                                                     
Query: 259     tgacaggtcgaggaactttgaaaggagaagggagaaca 296
               ||||||||| ||||| || || ||||||||||||||||
Sbjct: 2437324 tgacaggtcaaggaatttcgagaggagaagggagaaca 2437287



 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                           
Query: 1       tactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaactctcc 60
               ||||| ||||||||| ||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 2438390 tactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaactctcc 2438331

                            
Query: 61      tacaaactcaaag 73
               |||||||||||||
Sbjct: 2438330 tacaaactcaaag 2438318



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                            
Query: 1        tactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaactctcc 60
                ||||| ||||||||| ||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 19444007 tactcagtgtcaactcggcattactttgcttttggagctcttgtatctgaggaactctcc 19443948

                             
Query: 61       tacaaactcaaag 73
                |||||||||||||
Sbjct: 19443947 tacaaactcaaag 19443935



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                            
Query: 75       agttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataaggact 134
                ||||||| |||||||| ||||||||||| || |||||||| |||||||||||||||||||
Sbjct: 19443839 agttgcccaaggtccgctgggttcttccagactcatacctggatgtcagaaataaggact 19443780

                       
Query: 135      atggagg 141
                | |||||
Sbjct: 19443779 acggagg 19443773



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                           
Query: 75      agttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataaggact 134
               ||||||| |||||||| ||||||||||| || ||||| || |||||||||||||||||||
Sbjct: 2438224 agttgcccaaggtccgctgggttcttccagactcatatctggatgtcagaaataaggact 2438165

                      
Query: 135     atggagg 141
               |||||||
Sbjct: 2438164 atggagg 2438158



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>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0095O23
          Length = 159792

 Score =  155 bits (78), Expect = 2e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                          
Query: 139    aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 198
              |||||| || |||||| ||||| ||||||||||||| ||||| || ||||||||||||||
Sbjct: 115854 aggagagccttttataaatggagaagctgttccttatgaccctaagtaccatgaggagtg 115795

                                                                          
Query: 199    ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 258
              ||||||||||||||| ||||||||||| ||  |||| ||||| || |||||| | |||||
Sbjct: 115794 ggtgagaaacaatgcacgtgccaatgaaaggacccgacgcaatgataggcctagaaactt 115735

                                                    
Query: 259    tgacaggtcgaggaactttgaaaggagaagggagaaca 296
              ||||||||| ||||| || || ||||||||||||||||
Sbjct: 115734 tgacaggtcaaggaatttcgagaggagaagggagaaca 115697



 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                          
Query: 1      tactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaactctcc 60
              ||||| ||||||||| ||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 116800 tactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaactctcc 116741

                           
Query: 61     tacaaactcaaag 73
              |||||||||||||
Sbjct: 116740 tacaaactcaaag 116728



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                          
Query: 75     agttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataaggact 134
              ||||||| |||||||| ||||||||||| || ||||| || |||||||||||||||||||
Sbjct: 116634 agttgcccaaggtccgctgggttcttccagactcatatctggatgtcagaaataaggact 116575

                     
Query: 135    atggagg 141
              |||||||
Sbjct: 116574 atggagg 116568



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>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0406E03
          Length = 201069

 Score =  155 bits (78), Expect = 2e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                         
Query: 139   aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 198
             |||||| || |||||| ||||| ||||||||||||| ||||| || ||||||||||||||
Sbjct: 24034 aggagagccttttataaatggagaagctgttccttatgaccctaagtaccatgaggagtg 23975

                                                                         
Query: 199   ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 258
             ||||||||||||||| ||||||||||| ||  |||| ||||| || |||||| | |||||
Sbjct: 23974 ggtgagaaacaatgcacgtgccaatgaaaggacccgacgcaatgataggcctagaaactt 23915

                                                   
Query: 259   tgacaggtcgaggaactttgaaaggagaagggagaaca 296
             ||||||||| ||||| || || ||||||||||||||||
Sbjct: 23914 tgacaggtcaaggaatttcgagaggagaagggagaaca 23877



 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                         
Query: 1     tactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaactctcc 60
             ||||| ||||||||| ||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 24980 tactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaactctcc 24921

                          
Query: 61    tacaaactcaaag 73
             |||||||||||||
Sbjct: 24920 tacaaactcaaag 24908



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                         
Query: 75    agttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataaggact 134
             ||||||| |||||||| ||||||||||| || ||||| || |||||||||||||||||||
Sbjct: 24814 agttgcccaaggtccgctgggttcttccagactcatatctggatgtcagaaataaggact 24755

                    
Query: 135   atggagg 141
             |||||||
Sbjct: 24754 atggagg 24748



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>ref|NM_104204.2| Arabidopsis thaliana unknown protein AT1G53260 mRNA, complete cds
          Length = 1408

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 114/139 (82%)
 Strand = Plus / Plus

                                                                       
Query: 75  agttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataaggact 134
           |||||||||||||    ||||||||||||||||| ||| | ||||  |  ||||| ||||
Sbjct: 549 agttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaataaagact 608

                                                                       
Query: 135 atggaggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgagg 194
           ||||||||||||| || || |||||| | ||||||||||| ||||| || || ||||| |
Sbjct: 609 atggaggagaacctttcattgatggaaaggctgttccttatgacccaaagtatcatgaag 668

                              
Query: 195 agtgggtgagaaacaatgc 213
           | ||| | |||||||||||
Sbjct: 669 aatggataagaaacaatgc 687



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>gb|AY735538.1| Arabidopsis thaliana chromosome 1 hypothetical protein AT1G53260
           mRNA, complete cds, alternatively spliced
          Length = 1335

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 114/139 (82%)
 Strand = Plus / Plus

                                                                       
Query: 75  agttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataaggact 134
           |||||||||||||    ||||||||||||||||| ||| | ||||  |  ||||| ||||
Sbjct: 548 agttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaataaagact 607

                                                                       
Query: 135 atggaggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgagg 194
           ||||||||||||| || || |||||| | ||||||||||| ||||| || || ||||| |
Sbjct: 608 atggaggagaacctttcattgatggaaaggctgttccttatgacccaaagtatcatgaag 667

                              
Query: 195 agtgggtgagaaacaatgc 213
           | ||| | |||||||||||
Sbjct: 668 aatggataagaaacaatgc 686



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>gb|AY735537.1| Arabidopsis thaliana chromosome 1 hypothetical protein AT1G53260
           mRNA, complete cds, alternatively spliced
          Length = 1447

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 114/139 (82%)
 Strand = Plus / Plus

                                                                       
Query: 75  agttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataaggact 134
           |||||||||||||    ||||||||||||||||| ||| | ||||  |  ||||| ||||
Sbjct: 549 agttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaataaagact 608

                                                                       
Query: 135 atggaggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgagg 194
           ||||||||||||| || || |||||| | ||||||||||| ||||| || || ||||| |
Sbjct: 609 atggaggagaacctttcattgatggaaaggctgttccttatgacccaaagtatcatgaag 668

                              
Query: 195 agtgggtgagaaacaatgc 213
           | ||| | |||||||||||
Sbjct: 669 aatggataagaaacaatgc 687



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>gb|AY954765.1| Arabidopsis thaliana hypothetical protein (At1g53260) mRNA,
           complete cds
          Length = 816

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 114/139 (82%)
 Strand = Plus / Plus

                                                                       
Query: 75  agttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataaggact 134
           |||||||||||||    ||||||||||||||||| ||| | ||||  |  ||||| ||||
Sbjct: 83  agttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaataaagact 142

                                                                       
Query: 135 atggaggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgagg 194
           ||||||||||||| || || |||||| | ||||||||||| ||||| || || ||||| |
Sbjct: 143 atggaggagaacctttcattgatggaaaggctgttccttatgacccaaagtatcatgaag 202

                              
Query: 195 agtgggtgagaaacaatgc 213
           | ||| | |||||||||||
Sbjct: 203 aatggataagaaacaatgc 221



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>ref|NM_112362.2| Arabidopsis thaliana unknown protein AT3G15000 mRNA, complete cds
          Length = 1556

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 92  tgggttcttcctgattcatacctcgatgtcagaaataaggactatggaggagaaccattt 151
           |||||||||||||| || ||||| ||||| || || || ||||||||||| ||||| || 
Sbjct: 562 tgggttcttcctgactcttacctggatgtgaggaacaaagactatggaggggaacctttc 621

                                                                       
Query: 152 atagatggacaagctgttccttacgaccccaaataccatgaggagtgggtgagaaacaat 211
           || |||||  | ||||||||||| || || || ||||| ||||||||| | || ||||||
Sbjct: 622 atcgatgggaaggctgttccttatgatcctaagtaccacgaggagtggataaggaacaat 681

             
Query: 212 gc 213
           ||
Sbjct: 682 gc 683



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>gb|BT015868.1| Arabidopsis thaliana At3g15000 mRNA, complete cds
          Length = 1188

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 92  tgggttcttcctgattcatacctcgatgtcagaaataaggactatggaggagaaccattt 151
           |||||||||||||| || ||||| ||||| || || || ||||||||||| ||||| || 
Sbjct: 505 tgggttcttcctgactcttacctggatgtgaggaacaaagactatggaggggaacctttc 564

                                                                       
Query: 152 atagatggacaagctgttccttacgaccccaaataccatgaggagtgggtgagaaacaat 211
           || |||||  | ||||||||||| || || || ||||| ||||||||| | || ||||||
Sbjct: 565 atcgatgggaaggctgttccttatgatcctaagtaccacgaggagtggataaggaacaat 624

             
Query: 212 gc 213
           ||
Sbjct: 625 gc 626



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>gb|AF428427.1|AF428427 Arabidopsis thaliana AT3g15000/K15M2_14 mRNA, complete cds
          Length = 1459

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 92  tgggttcttcctgattcatacctcgatgtcagaaataaggactatggaggagaaccattt 151
           |||||||||||||| || ||||| ||||| || || || ||||||||||| ||||| || 
Sbjct: 562 tgggttcttcctgactcttacctggatgtgaggaacaaagactatggaggggaacctttc 621

                                                                       
Query: 152 atagatggacaagctgttccttacgaccccaaataccatgaggagtgggtgagaaacaat 211
           || |||||  | ||||||||||| || || || ||||| ||||||||| | || ||||||
Sbjct: 622 atcgatgggaaggctgttccttatgatcctaagtaccacgaggagtggataaggaacaat 681

             
Query: 212 gc 213
           ||
Sbjct: 682 gc 683



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>emb|BX823328.1|CNS0A5D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS22ZG05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1445

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 99/122 (81%), Gaps = 1/122 (0%)
 Strand = Plus / Plus

                                                                       
Query: 92  tgggttcttcctgattcatacctcgatgtcagaaataaggactatggaggagaaccattt 151
           |||||||||||||| || ||||| ||||| || || || ||||||||||| ||| | || 
Sbjct: 538 tgggttcttcctgactcttacctggatgtgaggaacaaagactatggaggggaa-ctttc 596

                                                                       
Query: 152 atagatggacaagctgttccttacgaccccaaataccatgaggagtgggtgagaaacaat 211
           || |||||  | ||||||||||| || || || ||||| ||||||||| | || ||||||
Sbjct: 597 atcgatgggaaggctgttccttatgatcctaagtaccacgaggagtggataaggaacaat 656

             
Query: 212 gc 213
           ||
Sbjct: 657 gc 658



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>gb|AC008007.7|AC008007 Genomic sequence for Arabidopsis thaliana BAC F12M16 from chromosome I,
             complete sequence
          Length = 130235

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                         
Query: 139   aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 198
             ||||||||| || || |||||| | ||||||||||| ||||| || || ||||| || ||
Sbjct: 58967 aggagaacctttcattgatggaaaggctgttccttatgacccaaagtatcatgaagaatg 58908

                            
Query: 199   ggtgagaaacaatgc 213
             | | |||||||||||
Sbjct: 58907 gataagaaacaatgc 58893



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>dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K15M2
          Length = 79279

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 92    tgggttcttcctgattcatacctcgatgtcagaaataaggactatggagg 141
             |||||||||||||| || ||||| ||||| || || || |||||||||||
Sbjct: 47112 tgggttcttcctgactcttacctggatgtgaggaacaaagactatggagg 47161



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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 382    gggcccgccaccgccttcggg 402
              |||||||||||||||||||||
Sbjct: 328931 gggcccgccaccgccttcggg 328951



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>emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on chromosome 9 Contains the 5'
              end of the ENG gene for endoglin (Osler-Rendu-Weber
              syndrome 1) (END, ORW, HHT1, ORW1, CD105), the AK1 gene for
              adenylate kinase 1, the ST6GALNAC6 gene for
              CMP-NeuAC:(beta)-N-acetylgalactosaminide
              (alpha)2,6-sialyltransferase member VI (ST6GALNACVI), the
              SIAT7D gene for sialyltransferase 7D
              ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,
              3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase)
              (SIAT3C, ST6GALNAC4, ST6GALNACIV), the DPM2 gene for
              dolichyl-phosphate mannosyltransferase polypeptide 2,
              regulatory subunit (MGC21559), the gene for a novel protien
              containing FLJ00179, a novel gene and ten CpG islands,
              complete sequence
          Length = 164201

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 314    gggcctgctccaccagggcagagcc 338
              ||||||||||||| |||||||||||
Sbjct: 156330 gggcctgctccacaagggcagagcc 156354



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>emb|X82639.1|MRZP3 M.radiata mRNA for zona pellucida glycoprotein-3
          Length = 1299

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 264 ggtcgaggaactttgaaaggagaag 288
           ||||||||||||||||||| |||||
Sbjct: 777 ggtcgaggaactttgaaagcagaag 753



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>gb|AC092716.7| Mus musculus chromosome 5, clone RP23-14J20, complete sequence
          Length = 215382

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 553    agctggtaaccaaggctacc 572
              ||||||||||||||||||||
Sbjct: 139811 agctggtaaccaaggctacc 139792



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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 354     atgctgctcctccaaggcgt 373
               ||||||||||||||||||||
Sbjct: 2993521 atgctgctcctccaaggcgt 2993502



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 141      gagaaccatttatagatgga 160
                ||||||||||||||||||||
Sbjct: 25855639 gagaaccatttatagatgga 25855620



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>gb|AC145387.2| Oryza sativa chromosome 3 BAC OSJNBb0031A14 genomic sequence, complete
             sequence
          Length = 44761

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   gagaaccatttatagatgga 160
             ||||||||||||||||||||
Sbjct: 26582 gagaaccatttatagatgga 26563



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>emb|AL109853.4|HSJ765F13 Human DNA sequence from clone RP4-765F13 on chromosome Xq25-26.2
             Contains two seven transmembrane helix receptor
             pseudogenes and the gene for a novel protein similar to
             part of hepatoma-derived growth factor (high-mobility
             group protein 1-like) (HDGF), complete sequence
          Length = 106465

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 603   gaccaggcccagcccatcat 622
             ||||||||||||||||||||
Sbjct: 86758 gaccaggcccagcccatcat 86777



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>emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segment 7/7
          Length = 344615

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 315    ggcctgctccaccagggcag 334
              ||||||||||||||||||||
Sbjct: 195393 ggcctgctccaccagggcag 195412



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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    cgggcctgctccaccagggc 332
              ||||||||||||||||||||
Sbjct: 689459 cgggcctgctccaccagggc 689440



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 141      gagaaccatttatagatgga 160
                ||||||||||||||||||||
Sbjct: 25946948 gagaaccatttatagatgga 25946929



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>gb|AC105068.19| Mus musculus chromosome 5, clone RP23-445H19, complete sequence
          Length = 199878

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    ctttgaaaggagaagggaga 293
              ||||||||||||||||||||
Sbjct: 123988 ctttgaaaggagaagggaga 124007



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>gb|AC095350.8| Homo sapiens 12 BAC RP11-662M24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 129055

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ccatgaggagtgggtgagaa 206
             ||||||||||||||||||||
Sbjct: 19751 ccatgaggagtgggtgagaa 19732


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,165,088
Number of Sequences: 3902068
Number of extensions: 5165088
Number of successful extensions: 98163
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97905
Number of HSP's gapped (non-prelim): 248
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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