ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baall23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 96 9e-17
2gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 96 9e-17
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 96 9e-17
4dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 9e-17
5dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 9e-17
6dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 9e-17
7gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA... 72 1e-09
8ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA 66 8e-08
9ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group... 66 8e-08
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 66 8e-08
11dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 66 8e-08
12dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic D... 66 8e-08
13dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 8e-08
14dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 8e-08
15dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 8e-08
16gb|AY108197.1| Zea mays PCO065133 mRNA sequence 62 1e-06
17ref|XM_473942.1| Oryza sativa (japonica cultivar-group), predic... 42 1.1
18emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 42 1.1
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
20gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) m... 42 1.1
21dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
22dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
23gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 4.4
24gb|AY248747.1| Xanthomonas campestris pv. vesicatoria OpgH (opgH... 40 4.4
25emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 4.4
26emb|AL627222.10| Mouse DNA sequence from clone RP23-265A5 on chr... 40 4.4
27gb|BC055690.1| Mus musculus RIKEN cDNA 5730593F17 gene, mRNA (cD... 40 4.4
28dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 4.4
29gb|AE011690.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 4.4
30dbj|AK143632.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f... 40 4.4
31dbj|AK165378.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f... 40 4.4
32gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 4.4
33gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 4.4

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                            
Query: 1        ggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcga 60
                ||||||||||||||||||||||||| |||| ||||||  ||||  |||||||||||||| 
Sbjct: 32328056 ggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcacccgcgc 32328115

                                                    
Query: 61       acacatcttcaccgagggcgaccgcctcggccgccc 96
                 ||||||| |||||| | ||||||||||| ||||||
Sbjct: 32328116 ccacatctacaccgacgccgaccgcctcgcccgccc 32328151



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>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                         
Query: 1     ggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcga 60
             ||||||||||||||||||||||||| |||| ||||||  ||||  |||||||||||||| 
Sbjct: 61823 ggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcacccgcgc 61882

                                                 
Query: 61    acacatcttcaccgagggcgaccgcctcggccgccc 96
              ||||||| |||||| | ||||||||||| ||||||
Sbjct: 61883 ccacatctacaccgacgccgaccgcctcgcccgccc 61918



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                            
Query: 1        ggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcga 60
                ||||||||||||||||||||||||| |||| ||||||  ||||  |||||||||||||| 
Sbjct: 32418566 ggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcacccgcgc 32418625

                                                    
Query: 61       acacatcttcaccgagggcgaccgcctcggccgccc 96
                 ||||||| |||||| | ||||||||||| ||||||
Sbjct: 32418626 ccacatctacaccgacgccgaccgcctcgcccgccc 32418661



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>dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N09, full
            insert sequence
          Length = 1526

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcga 60
            ||||||||||||||||||||||||| |||| ||||||  ||||  |||||||||||||| 
Sbjct: 1074 ggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcacccgcgc 1133

                                                
Query: 61   acacatcttcaccgagggcgaccgcctcggccgccc 96
             ||||||| |||||| | ||||||||||| ||||||
Sbjct: 1134 ccacatctacaccgacgccgaccgcctcgcccgccc 1169



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>dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E15, full
            insert sequence
          Length = 1522

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcga 60
            ||||||||||||||||||||||||| |||| ||||||  ||||  |||||||||||||| 
Sbjct: 1070 ggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcacccgcgc 1129

                                                
Query: 61   acacatcttcaccgagggcgaccgcctcggccgccc 96
             ||||||| |||||| | ||||||||||| ||||||
Sbjct: 1130 ccacatctacaccgacgccgaccgcctcgcccgccc 1165



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>dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H12, full
            insert sequence
          Length = 1586

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcga 60
            ||||||||||||||||||||||||| |||| ||||||  ||||  |||||||||||||| 
Sbjct: 1134 ggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcacccgcgc 1193

                                                
Query: 61   acacatcttcaccgagggcgaccgcctcggccgccc 96
             ||||||| |||||| | ||||||||||| ||||||
Sbjct: 1194 ccacatctacaccgacgccgaccgcctcgcccgccc 1229



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>gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA, complete cds
          Length = 1473

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcga 60
            |||||||||||||||||||||| || |||| ||||||  ||||  |||||||||||||| 
Sbjct: 1040 ggagttcgagctcaccatggcgttcagcggatgcacctcgctcgccgacatcacccgcgc 1099

                                                
Query: 61   acacatcttcaccgagggcgaccgcctcggccgccc 96
             ||||||| ||| || | ||| ||||||| ||||||
Sbjct: 1100 ccacatctacacggacgccgaacgcctcgcccgccc 1135



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>ref|XM_476669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1439

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcgaa 61
            |||||||||||||||||||||||| |||| ||||||   |||  ||||||||||||| | 
Sbjct: 1066 gagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaac 1125

                                 
Query: 62   cacatcttcaccgagggcgac 82
            ||| || ||||||||| ||||
Sbjct: 1126 cacgtcatcaccgaggccgac 1146



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>ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group), B1364A02.11-1 mRNA
          Length = 1501

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcgaa 61
            |||||||||||||||||||||||| |||| ||||||   |||  ||||||||||||| | 
Sbjct: 1107 gagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaac 1166

                                 
Query: 62   cacatcttcaccgagggcgac 82
            ||| || ||||||||| ||||
Sbjct: 1167 cacgtcatcaccgaggccgac 1187



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                           
Query: 2       gagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcgaa 61
               |||||||||||||||||||||||| |||| ||||||   |||  ||||||||||||| | 
Sbjct: 2833101 gagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaac 2833160

                                    
Query: 62      cacatcttcaccgagggcgac 82
               ||| || ||||||||| ||||
Sbjct: 2833161 cacgtcatcaccgaggccgac 2833181



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>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1364A02
          Length = 137933

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                          
Query: 2      gagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcgaa 61
              |||||||||||||||||||||||| |||| ||||||   |||  ||||||||||||| | 
Sbjct: 136662 gagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaac 136721

                                   
Query: 62     cacatcttcaccgagggcgac 82
              ||| || ||||||||| ||||
Sbjct: 136722 cacgtcatcaccgaggccgac 136742



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>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0050B07
          Length = 142134

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcgaa 61
            |||||||||||||||||||||||| |||| ||||||   |||  ||||||||||||| | 
Sbjct: 3388 gagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaac 3447

                                 
Query: 62   cacatcttcaccgagggcgac 82
            ||| || ||||||||| ||||
Sbjct: 3448 cacgtcatcaccgaggccgac 3468



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>dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A14, full
            insert sequence
          Length = 1738

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcgaa 61
            |||||||||||||||||||||||| |||| ||||||   |||  ||||||||||||| | 
Sbjct: 1365 gagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaac 1424

                                 
Query: 62   cacatcttcaccgagggcgac 82
            ||| || ||||||||| ||||
Sbjct: 1425 cacgtcatcaccgaggccgac 1445



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>dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E11, full
            insert sequence
          Length = 1439

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcgaa 61
            |||||||||||||||||||||||| |||| ||||||   |||  ||||||||||||| | 
Sbjct: 1066 gagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaac 1125

                                 
Query: 62   cacatcttcaccgagggcgac 82
            ||| || ||||||||| ||||
Sbjct: 1126 cacgtcatcaccgaggccgac 1146



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>dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E08, full
            insert sequence
          Length = 1501

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcgaa 61
            |||||||||||||||||||||||| |||| ||||||   |||  ||||||||||||| | 
Sbjct: 1107 gagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaac 1166

                                 
Query: 62   cacatcttcaccgagggcgac 82
            ||| || ||||||||| ||||
Sbjct: 1167 cacgtcatcaccgaggccgac 1187



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>gb|AY108197.1| Zea mays PCO065133 mRNA sequence
          Length = 1667

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagttcgagctcaccatggcgctcggcgggtgcaccaagctcagcgacatcacccgcgaa 61
            |||||||||||||||||||||||| |||| ||||||   |||  ||| ||||||||| | 
Sbjct: 1214 gagttcgagctcaccatggcgctcagcggctgcacctccctcgccgaaatcacccgcaag 1273

                           
Query: 62   cacatcttcaccgag 76
            |||||| ||||||||
Sbjct: 1274 cacatcatcaccgag 1288



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>ref|XM_473942.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 8    gagctcaccatggcgctcggcgggtgcac 36
            |||||||||||||||||| |||| |||||
Sbjct: 1006 gagctcaccatggcgctcagcggatgcac 1034



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>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
             complete sequence
          Length = 187601

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 8     gagctcaccatggcgctcggcgggtgcac 36
             |||||||||||||||||| |||| |||||
Sbjct: 59332 gagctcaccatggcgctcagcggatgcac 59360



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 8        gagctcaccatggcgctcggcgggtgcac 36
                |||||||||||||||||| |||| |||||
Sbjct: 31726062 gagctcaccatggcgctcagcggatgcac 31726090



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>gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) mRNA, complete cds
          Length = 1486

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    ggagttcgagctcaccatggc 21
            |||||||||||||||||||||
Sbjct: 1095 ggagttcgagctcaccatggc 1115



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>dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156O03, full
            insert sequence
          Length = 1435

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 8    gagctcaccatggcgctcggcgggtgcac 36
            |||||||||||||||||| |||| |||||
Sbjct: 1075 gagctcaccatggcgctcagcggatgcac 1103



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>dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F07, full
            insert sequence
          Length = 1427

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 8    gagctcaccatggcgctcggcgggtgcac 36
            |||||||||||||||||| |||| |||||
Sbjct: 1079 gagctcaccatggcgctcagcggatgcac 1107



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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 79      cgaccgcctcggccgcccgc 98
               ||||||||||||||||||||
Sbjct: 1195645 cgaccgcctcggccgcccgc 1195626



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>gb|AY248747.1| Xanthomonas campestris pv. vesicatoria OpgH (opgH) gene, complete cds
          Length = 3005

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 40   gctcagcgacatcacccgcgaacacatc 67
            ||||||||||| ||||||||| ||||||
Sbjct: 1024 gctcagcgacaccacccgcgagcacatc 1051



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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 40     gctcagcgacatcacccgcgaacacatc 67
              ||||||||||| ||||||||| ||||||
Sbjct: 766298 gctcagcgacaccacccgcgagcacatc 766325



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>emb|AL627222.10| Mouse DNA sequence from clone RP23-265A5 on chromosome 11 Contains a
             novel gene, the Tac4 gene for tachykinin, the Myst2 gene
             for MYST histone acetyltransferase 2,  two novel genes,
             the 5' end of the gene for the likely ortholog of H.
             sapiens C/EBP-induced protein (5730593F17Rik) and a CpG
             island, complete sequence
          Length = 185645

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    ccgcctcggccgcccgctgc 101
             ||||||||||||||||||||
Sbjct: 35105 ccgcctcggccgcccgctgc 35124



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>gb|BC055690.1| Mus musculus RIKEN cDNA 5730593F17 gene, mRNA (cDNA clone MGC:66582
           IMAGE:6415669), complete cds
          Length = 2306

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  ccgcctcggccgcccgctgc 101
           ||||||||||||||||||||
Sbjct: 52  ccgcctcggccgcccgctgc 33



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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 40      gctcagcgacatcacccgcgaacacatc 67
               ||||||||||| ||||||||| ||||||
Sbjct: 4277355 gctcagcgacaccacccgcgagcacatc 4277328



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>gb|AE011690.1| Xanthomonas axonopodis pv. citri str. 306,  section 68 of 469 of the
            complete genome
          Length = 11141

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 40   gctcagcgacatcacccgcgaacacatc 67
            ||||||||||| ||||||||| ||||||
Sbjct: 3617 gctcagcgacaccacccgcgagcacatc 3644



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>dbj|AK143632.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
           library, clone:F430004E11 product:C/EBP-induced protein
           homolog, full insert sequence
          Length = 2324

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  ccgcctcggccgcccgctgc 101
           ||||||||||||||||||||
Sbjct: 81  ccgcctcggccgcccgctgc 62



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>dbj|AK165378.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
           library, clone:F430205F12 product:C/EBP-induced protein
           homolog [Mus musculus], full insert sequence
          Length = 984

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  ccgcctcggccgcccgctgc 101
           ||||||||||||||||||||
Sbjct: 81  ccgcctcggccgcccgctgc 62



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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 40      gctcagcgacatcacccgcgaacacatc 67
               ||||||||||| ||||||||| ||||||
Sbjct: 4284145 gctcagcgacaccacccgcgagcacatc 4284118



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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 72      ccgagggcgaccgcctcggc 91
               ||||||||||||||||||||
Sbjct: 2686049 ccgagggcgaccgcctcggc 2686030


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,595,796
Number of Sequences: 3902068
Number of extensions: 1595796
Number of successful extensions: 29315
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28904
Number of HSP's gapped (non-prelim): 403
length of query: 332
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 310
effective length of database: 17,147,199,772
effective search space: 5315631929320
effective search space used: 5315631929320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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