Clone Name | baall22 |
---|---|
Clone Library Name | barley_pub |
>SUS1_HORVU (P31922) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) Length = 807 Score = 114 bits (285), Expect(2) = 6e-28 Identities = 56/56 (100%), Positives = 56/56 (100%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 205 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS Sbjct: 750 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 805 Score = 29.3 bits (64), Expect(2) = 6e-28 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GLKRIYEKYTW Sbjct: 739 GLKRIYEKYTW 749
>SUS1_ORYSA (P30298) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) Length = 808 Score = 111 bits (277), Expect(2) = 1e-26 Identities = 53/56 (94%), Positives = 56/56 (100%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 205 KLYSERLMTLTGVYGFWKYVSNLERRETRRY+EMFYALKYRSLA+AVPLAVDGES+ Sbjct: 751 KLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASAVPLAVDGEST 806 Score = 27.7 bits (60), Expect(2) = 1e-26 Identities = 10/11 (90%), Positives = 11/11 (100%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RIYEKYTW Sbjct: 740 GLQRIYEKYTW 750
>SUS2_TULGE (Q41607) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 820 Score = 101 bits (252), Expect(2) = 3e-24 Identities = 46/56 (82%), Positives = 54/56 (96%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 205 K+YSERL+TL GVYGFWKYVSNL+RRET+RYLEMFYALKYR+LA +VPLAVDGE++ Sbjct: 755 KIYSERLLTLAGVYGFWKYVSNLDRRETKRYLEMFYALKYRNLAKSVPLAVDGEAA 810 Score = 29.3 bits (64), Expect(2) = 3e-24 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GLKRIYEKYTW Sbjct: 744 GLKRIYEKYTW 754
>SUS2_ORYSA (P31924) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 816 Score = 103 bits (258), Expect(2) = 2e-23 Identities = 49/56 (87%), Positives = 53/56 (94%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 205 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEM YALKYR++A+ VPLAV+GE S Sbjct: 759 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVEGEPS 814 Score = 24.3 bits (51), Expect(2) = 2e-23 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RI EKYTW Sbjct: 748 GLQRIEEKYTW 758
>SUS2_MAIZE (P49036) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 816 Score = 103 bits (258), Expect(2) = 2e-23 Identities = 49/56 (87%), Positives = 53/56 (94%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 205 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEM YALKYR++A+ VPLAV+GE S Sbjct: 759 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVEGEPS 814 Score = 24.3 bits (51), Expect(2) = 2e-23 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RI EKYTW Sbjct: 748 GLQRIEEKYTW 758
>SUS1_MAIZE (P04712) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) (Shrunken-1) Length = 802 Score = 100 bits (248), Expect(2) = 3e-23 Identities = 47/52 (90%), Positives = 50/52 (96%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 KLYSERLMTLTGVYGFWKYVSNLERRETRRY+EMFYALKYRSLA+ VPL+ D Sbjct: 751 KLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASQVPLSFD 802 Score = 27.7 bits (60), Expect(2) = 3e-23 Identities = 10/11 (90%), Positives = 11/11 (100%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RIYEKYTW Sbjct: 740 GLQRIYEKYTW 750
>SUS2_HORVU (P31923) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 816 Score = 102 bits (255), Expect(2) = 5e-23 Identities = 48/56 (85%), Positives = 53/56 (94%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 205 KLYSERLMTL+GVYGFWKYVSNL+RRETRRYLEM YALKYR +AA VPLAV+GE+S Sbjct: 759 KLYSERLMTLSGVYGFWKYVSNLDRRETRRYLEMLYALKYRKMAATVPLAVEGETS 814 Score = 24.3 bits (51), Expect(2) = 5e-23 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RI EKYTW Sbjct: 748 GLQRIEEKYTW 758
>SUS1_TULGE (Q41608) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) Length = 805 Score = 99.4 bits (246), Expect(2) = 5e-23 Identities = 46/52 (88%), Positives = 50/52 (96%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 KLYSERLMTL GVYGFWKYVSNL+RRETRRYLEMFYALKYR+LA +VPLA+D Sbjct: 753 KLYSERLMTLAGVYGFWKYVSNLDRRETRRYLEMFYALKYRNLAKSVPLAID 804 Score = 27.7 bits (60), Expect(2) = 5e-23 Identities = 10/11 (90%), Positives = 11/11 (100%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RIYEKYTW Sbjct: 742 GLQRIYEKYTW 752
>SUS3_ORYSA (Q43009) Sucrose synthase 3 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 3) Length = 816 Score = 99.8 bits (247), Expect(2) = 4e-22 Identities = 45/56 (80%), Positives = 52/56 (92%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 205 KLYSERLMTL+GVYGFWKYV+NL+RRETRRYLEM YALKYR +A VPLA++GE+S Sbjct: 759 KLYSERLMTLSGVYGFWKYVTNLDRRETRRYLEMLYALKYRKMATTVPLAIEGEAS 814 Score = 24.3 bits (51), Expect(2) = 4e-22 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RI EKYTW Sbjct: 748 GLQRIEEKYTW 758
>SUSY_PHAAU (Q01390) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 91.7 bits (226), Expect(2) = 9e-20 Identities = 41/52 (78%), Positives = 50/52 (96%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 ++YS+RL+TLTGVYGFWK+VSNL+RRE+RRYLEMFYALKYR LA +VPLAV+ Sbjct: 754 QIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805 Score = 24.3 bits (51), Expect(2) = 9e-20 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RI EKYTW Sbjct: 743 GLQRIEEKYTW 753
>SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (Nodulin-100) Length = 805 Score = 90.1 bits (222), Expect(2) = 3e-19 Identities = 40/52 (76%), Positives = 49/52 (94%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 ++YS+RL+TLTGVYGFWK+VSNL+RRE+RRYLEMFYALKYR LA +VPLA + Sbjct: 754 QIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAAE 805 Score = 24.3 bits (51), Expect(2) = 3e-19 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RI EKYTW Sbjct: 743 GLQRIEEKYTW 753
>SUS2_ARATH (Q00917) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 85.5 bits (210), Expect(2) = 5e-19 Identities = 39/52 (75%), Positives = 45/52 (86%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 K YSERL+TL GVY FWK+VS LERRETRRYLEMFY+LK+R LA ++PLA D Sbjct: 752 KKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDLANSIPLATD 803 Score = 28.1 bits (61), Expect(2) = 5e-19 Identities = 10/11 (90%), Positives = 11/11 (100%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GLKRIYE+YTW Sbjct: 741 GLKRIYERYTW 751
>SUSY_BETVU (Q42652) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (Fragment) Length = 766 Score = 91.7 bits (226), Expect(2) = 5e-19 Identities = 44/54 (81%), Positives = 46/54 (85%) Frame = +2 Query: 44 YSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 205 YSERLMTL GVYGFWKYVS LERRETRRYLEMFY LK+R LA +VPLA D E S Sbjct: 702 YSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLATDEEPS 755 Score = 21.9 bits (45), Expect(2) = 5e-19 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL RI E+YTW Sbjct: 689 GLLRIKERYTW 699
>SUS2_PEA (O24301) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 809 Score = 86.7 bits (213), Expect(2) = 6e-19 Identities = 40/50 (80%), Positives = 44/50 (88%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLA 187 K+YSERLMTL GVY FWKYVS LERRETRRYLEMFY LK+R LA +VP+A Sbjct: 758 KIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIA 807 Score = 26.6 bits (57), Expect(2) = 6e-19 Identities = 9/11 (81%), Positives = 11/11 (100%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RIYE+YTW Sbjct: 747 GLQRIYERYTW 757
>SUSY_VICFA (P31926) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 806 Score = 89.0 bits (219), Expect(2) = 6e-19 Identities = 40/52 (76%), Positives = 49/52 (94%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 ++YS+RL+TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+ Sbjct: 754 QIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805 Score = 24.3 bits (51), Expect(2) = 6e-19 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RI EKYTW Sbjct: 743 GLQRIEEKYTW 753
>SUSY_MEDSA (O65026) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 88.6 bits (218), Expect(2) = 8e-19 Identities = 40/51 (78%), Positives = 48/51 (94%) Frame = +2 Query: 41 LYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 +YS+RL+TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+ Sbjct: 755 IYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805 Score = 24.3 bits (51), Expect(2) = 8e-19 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RI EKYTW Sbjct: 743 GLQRIEEKYTW 753
>SUSY_ALNGL (P49034) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 803 Score = 85.1 bits (209), Expect(2) = 3e-18 Identities = 39/52 (75%), Positives = 47/52 (90%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 K+YSERL+TLTGV FWK+VSNL+R E+RRY+EMFYALKYR LA +VPLAV+ Sbjct: 752 KIYSERLLTLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAVE 803 Score = 25.8 bits (55), Expect(2) = 3e-18 Identities = 9/11 (81%), Positives = 11/11 (100%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RI+EKYTW Sbjct: 741 GLQRIHEKYTW 751
>SUS1_DAUCA (P49035) Sucrose synthase isoform I (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) (Susy*Dc1) Length = 808 Score = 84.3 bits (207), Expect(2) = 4e-18 Identities = 39/52 (75%), Positives = 45/52 (86%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 ++YSERL+TL GVYGFWK+VS L+R E RRYLEMFYALKYR LA +VPLA D Sbjct: 756 QIYSERLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLAKD 807 Score = 26.2 bits (56), Expect(2) = 4e-18 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GLKRI EKYTW Sbjct: 745 GLKRIQEKYTW 755
>SUS2_DAUCA (O49845) Sucrose synthase isoform II (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) (Susy*Dc2) Length = 801 Score = 82.4 bits (202), Expect(2) = 1e-17 Identities = 39/52 (75%), Positives = 46/52 (88%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 ++YSERL+TL GVYGFWK+VS L+R E RRYLEMF ALKYR+LA +VPLAVD Sbjct: 750 QIYSERLLTLGGVYGFWKHVSKLDRIEIRRYLEMFCALKYRNLAESVPLAVD 801 Score = 26.2 bits (56), Expect(2) = 1e-17 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GLKRI EKYTW Sbjct: 739 GLKRIQEKYTW 749
>SUSY_LYCES (P49037) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 81.6 bits (200), Expect(2) = 2e-17 Identities = 37/52 (71%), Positives = 44/52 (84%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 ++YSERL+TL VYGFWK+VS L+R E RRYLEMFYALKYR +A AVPLA + Sbjct: 754 QIYSERLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805 Score = 26.2 bits (56), Expect(2) = 2e-17 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GLKRI EKYTW Sbjct: 743 GLKRIQEKYTW 753
>SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 806 Score = 82.4 bits (202), Expect(2) = 5e-17 Identities = 40/52 (76%), Positives = 46/52 (88%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 ++YS+RL+TLTGVYGFWK+VSNL+R E RRYLEMFYALKYR L AVPLA D Sbjct: 756 QIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPL--AVPLAQD 805 Score = 24.3 bits (51), Expect(2) = 5e-17 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GL+RI EKYTW Sbjct: 745 GLQRIEEKYTW 755
>SUS2_SOLTU (P49039) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (SS65) Length = 805 Score = 79.3 bits (194), Expect(2) = 1e-16 Identities = 36/52 (69%), Positives = 44/52 (84%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 ++YS+RL+TL VYGFWK+VS L+R E RRYLEMFYALK+R LA VPLAV+ Sbjct: 754 QIYSDRLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKFRKLAQLVPLAVE 805 Score = 26.2 bits (56), Expect(2) = 1e-16 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GLKRI EKYTW Sbjct: 743 GLKRIQEKYTW 753
>SUS1_SOLTU (P10691) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (SS16) Length = 805 Score = 79.3 bits (194), Expect(2) = 1e-16 Identities = 36/52 (69%), Positives = 43/52 (82%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 193 ++YSE L+TL VYGFWK+VS L+R E RRYLEMFYALKYR +A AVPLA + Sbjct: 754 QIYSESLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805 Score = 25.8 bits (55), Expect(2) = 1e-16 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 GLKRI EKYTW Sbjct: 743 GLKRIEEKYTW 753
>SUSY_SACOF (P31925) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (Fragment) Length = 218 Score = 66.6 bits (161), Expect(2) = 2e-12 Identities = 31/40 (77%), Positives = 35/40 (87%) Frame = +2 Query: 38 KLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKY 157 KLYSERLMTLTG YGFW YVS LER +T RY++MFYAL+Y Sbjct: 179 KLYSERLMTLTGAYGFWNYVSKLERGDT-RYIDMFYALEY 217 Score = 24.6 bits (52), Expect(2) = 2e-12 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 Query: 4 GLKRIYEKYTW 36 G +RIYEKYTW Sbjct: 168 GGQRIYEKYTW 178
>FCR1_CANAL (O93870) Fluconazole resistance protein 1| Length = 517 Score = 30.8 bits (68), Expect = 2.6 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = -1 Query: 462 DRQRNIALNSLMKDEHHGQAFIRGGWHEPASSTAQDLTNVP-------RHQIAHPTTDRP 304 D RN+ +S + EH G+AFI P +S Q T+ P + ++ P++D Sbjct: 175 DPNRNLKSSSRLFAEHKGEAFI----GSPVTSPQQMPTSNPFRRTSMFKEELESPSSDHY 230 Query: 303 NENYGRQIIAQP 268 NE+ Q + +P Sbjct: 231 NESIFSQSVDEP 242
>TOP1_AERPE (Q9YB01) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 673 Score = 30.4 bits (67), Expect = 3.4 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 Query: 410 GRRLFEAAGMNQQAALPKTSRMCRDIKSHTPRQTDQMKTTVDK 282 GRR+ +AG Q L + R R+I H P+ + +K T +K Sbjct: 183 GRRVILSAGRVQSPTLVEAYRRWREINLHVPKASVAVKITAEK 225
>SYY_NITWN (Q3SS12) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 417 Score = 30.0 bits (66), Expect = 4.4 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 62 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 184 T+ VY +W+Y N+E + R+L++F L +A L Sbjct: 250 TMLPVYDYWQYWRNVEDADVGRFLKLFTILPMGEIAKLAAL 290
>SDS3_MOUSE (Q8BR65) Sin3 histone deacetylase corepressor complex component| SDS3 (Suppressor of defective silencing 3 protein homolog) Length = 328 Score = 30.0 bits (66), Expect = 4.4 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%) Frame = -3 Query: 337 TSNRTPHDRQTK*KLR*TNHSAADTSPSRSMNAPSSCP----ESALVAAALAVDRQWNCS 170 T + D +T KL+ A+ +SP P+ P E+ + L D++W Sbjct: 212 TDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHK 271 Query: 169 SQATVLESVEHLQVTASLA 113 SQA LES ++ +++ ++ Sbjct: 272 SQAIYLESKDNQKLSCVIS 290
>SDS3_HUMAN (Q9H7L9) Sin3 histone deacetylase corepressor complex component| SDS3 (Suppressor of defective silencing 3 protein homolog) Length = 328 Score = 30.0 bits (66), Expect = 4.4 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%) Frame = -3 Query: 337 TSNRTPHDRQTK*KLR*TNHSAADTSPSRSMNAPSSCP----ESALVAAALAVDRQWNCS 170 T + D +T KL+ A+ +SP P+ P E+ + L D++W Sbjct: 212 TDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHK 271 Query: 169 SQATVLESVEHLQVTASLA 113 SQA LES ++ +++ ++ Sbjct: 272 SQAIYLESKDNQKLSCVIS 290
>RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subunit (EC| 2.7.7.6) (RPB1) (Fragment) Length = 467 Score = 29.3 bits (64), Expect = 7.6 Identities = 31/108 (28%), Positives = 46/108 (42%) Frame = -3 Query: 541 SSVSFTPEGRSELPTSKAHRGVS*DLRQTTKHCIELSDER*TPRAGVYSRRLA*TSKQHC 362 +S S++P S PTS ++ S T+ + S TP + YS TS + Sbjct: 213 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNY-TPTSPSYSP----TSPSYS 267 Query: 361 PRPHECAETSNRTPHDRQTK*KLR*TNHSAADTSPSRSMNAPSSCPES 218 P TS P+ T T+ S + TSPS S ++P P+S Sbjct: 268 PTSPNYTPTS---PNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 312
>HSLU_ENTFA (Q834K4) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 467 Score = 29.3 bits (64), Expect = 7.6 Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 12/65 (18%) Frame = -3 Query: 166 QATVLESVEHLQVTASLAPLQVAHVL------------PEPIHTGQGHQPLRVELXRCTS 23 Q +L VE QV PLQ H+L + I QG P+RVEL T+ Sbjct: 302 QRDILPIVEGSQVNTKYGPLQTDHILFIASGAFHLSKPSDLIPELQGRFPIRVELDDLTA 361 Query: 22 HKFSS 8 F S Sbjct: 362 DDFVS 366
>RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 29.3 bits (64), Expect = 7.6 Identities = 31/108 (28%), Positives = 46/108 (42%) Frame = -3 Query: 541 SSVSFTPEGRSELPTSKAHRGVS*DLRQTTKHCIELSDER*TPRAGVYSRRLA*TSKQHC 362 +S S++P S PTS ++ S T+ + S TP + YS TS + Sbjct: 1716 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNY-TPTSPSYSP----TSPSYS 1770 Query: 361 PRPHECAETSNRTPHDRQTK*KLR*TNHSAADTSPSRSMNAPSSCPES 218 P TS P+ T T+ S + TSPS S ++P P+S Sbjct: 1771 PTSPNYTPTS---PNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
>RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 29.3 bits (64), Expect = 7.6 Identities = 31/108 (28%), Positives = 46/108 (42%) Frame = -3 Query: 541 SSVSFTPEGRSELPTSKAHRGVS*DLRQTTKHCIELSDER*TPRAGVYSRRLA*TSKQHC 362 +S S++P S PTS ++ S T+ + S TP + YS TS + Sbjct: 1716 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNY-TPTSPSYSP----TSPSYS 1770 Query: 361 PRPHECAETSNRTPHDRQTK*KLR*TNHSAADTSPSRSMNAPSSCPES 218 P TS P+ T T+ S + TSPS S ++P P+S Sbjct: 1771 PTSPNYTPTS---PNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
>GSPJ_VIBCH (P45776) General secretion pathway protein J precursor (Cholera| toxin secretion protein epsJ) Length = 221 Score = 29.3 bits (64), Expect = 7.6 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -1 Query: 435 SLMKDEHHGQAFIRGGWHEP 376 SL+ + HG F+R GWH P Sbjct: 95 SLLDSDQHGLLFVRLGWHNP 114
>CAD_DROME (P09085) Homeotic protein caudal| Length = 427 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%) Frame = -1 Query: 417 HHGQAFIRGGWHEPASSTAQD-LTNVP--RHQI 328 H A G WH PASSTA + + NVP HQ+ Sbjct: 73 HSAAAASAGEWHSPASSTADNFVQNVPTSAHQL 105 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,542,859 Number of Sequences: 219361 Number of extensions: 1454804 Number of successful extensions: 4126 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 3795 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3985 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)