ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baall19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1174 bits (592), Expect = 0.0 Identities = 616/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 119999 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 119943 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119942 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 119883 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119882 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 119823 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119822 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 119763 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119762 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 119703 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119702 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 119643 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119642 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 119583 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119582 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 119523 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119522 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 119463 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119462 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 119403 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 119402 ggcgattgtcactgcttatg 119383 Score = 1174 bits (592), Expect = 0.0 Identities = 616/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 94895 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 94951 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94952 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 95011 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95012 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 95071 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95072 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 95131 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95132 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 95191 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95192 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 95251 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95252 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 95311 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95312 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 95371 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95372 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 95431 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95432 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 95491 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 95492 ggcgattgtcactgcttatg 95511
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 118780 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 118724 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118723 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 118664 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118663 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 118604 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118603 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 118544 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118543 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 118484 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118483 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 118424 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118423 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 118364 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118363 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 118304 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118303 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 118244 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 118243 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 118184 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 118183 ggcgattgtcactgcttatg 118164
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 119864 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 119808 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119807 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 119748 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119747 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 119688 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119687 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 119628 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119627 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 119568 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119567 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 119508 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119507 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 119448 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119447 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 119388 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119387 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 119328 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 119327 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 119268 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 119267 ggcgattgtcactgcttatg 119248 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 95292 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 95348 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95349 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 95408 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95409 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 95468 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95469 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 95528 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95529 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 95588 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95589 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 95648 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95649 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 95708 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95709 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 95768 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95769 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 95828 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 95829 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 95888 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 95889 ggcgattgtcactgcttatg 95908
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 119864 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 119808 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119807 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 119748 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119747 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 119688 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119687 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 119628 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119627 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 119568 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119567 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 119508 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119507 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 119448 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119447 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 119388 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119387 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 119328 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 119327 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 119268 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 119267 ggcgattgtcactgcttatg 119248 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 95292 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 95348 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95349 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 95408 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95409 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 95468 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95469 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 95528 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95529 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 95588 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95589 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 95648 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95649 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 95708 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95709 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 95768 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95769 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 95828 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 95829 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 95888 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 95889 ggcgattgtcactgcttatg 95908
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 119813 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 119757 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119756 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 119697 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119696 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 119637 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119636 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 119577 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119576 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 119517 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119516 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 119457 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119456 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 119397 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119396 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 119337 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119336 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 119277 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 119276 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 119217 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 119216 ggcgattgtcactgcttatg 119197 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 95237 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 95293 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95294 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 95353 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95354 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 95413 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95414 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 95473 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95474 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 95533 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95534 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 95593 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95594 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 95653 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95654 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 95713 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95714 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 95773 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 95774 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 95833 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 95834 ggcgattgtcactgcttatg 95853
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 31507870 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 31507926 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507927 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 31507986 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507987 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 31508046 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508047 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 31508106 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508107 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 31508166 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508167 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 31508226 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508227 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 31508286 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508287 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 31508346 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508347 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 31508406 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 31508407 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 31508466 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 31508467 ggcgattgtcactgcttatg 31508486
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 84726 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 84670 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84669 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 84610 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84609 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 84550 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84549 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 84490 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84489 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 84430 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84429 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 84370 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84369 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 84310 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84309 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 84250 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84249 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 84190 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 84189 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 84130 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 84129 ggcgattgtcactgcttatg 84110
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 119833 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 119777 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119776 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 119717 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119716 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 119657 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119656 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 119597 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119596 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 119537 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119536 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 119477 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119476 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 119417 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119416 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 119357 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119356 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 119297 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 119296 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 119237 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 119236 ggcgattgtcactgcttatg 119217 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 95285 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 95341 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95342 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 95401 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95402 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 95461 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95462 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 95521 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95522 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 95581 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95582 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 95641 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95642 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 95701 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95702 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 95761 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95762 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 95821 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 95822 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 95881 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 95882 ggcgattgtcactgcttatg 95901
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 122334 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 122390 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122391 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 122450 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122451 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 122510 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122511 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 122570 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122571 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 122630 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122631 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 122690 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122691 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 122750 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122751 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 122810 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122811 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 122870 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 122871 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 122930 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 122931 ggcgattgtcactgcttatg 122950 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 14059 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 14115 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14116 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 14175 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14176 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 14235 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14236 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 14295 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14296 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 14355 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 14356 tacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccac 14415 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14416 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 14475 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14476 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 14535 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14536 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 14595 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 14596 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 14655 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 14656 ggcgattgtcactgcttatg 14675
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 58552 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 58496 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58495 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 58436 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58435 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 58376 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58375 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 58316 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58315 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 58256 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58255 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 58196 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58195 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 58136 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58135 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 58076 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58075 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 58016 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 58015 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 57956 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 57955 ggcgattgtcactgcttatg 57936
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 9268219 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 9268275 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268276 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 9268335 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268336 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 9268395 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268396 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 9268455 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268456 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 9268515 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268516 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 9268575 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268576 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 9268635 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268636 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 9268695 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268696 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 9268755 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 9268756 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 9268815 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 9268816 ggcgattgtcactgcttatg 9268835 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 9227719 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 9227775 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227776 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 9227835 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227836 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 9227895 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227896 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 9227955 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227956 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 9228015 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228016 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 9228075 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228076 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 9228135 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228136 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 9228195 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228196 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 9228255 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 9228256 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 9228315 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 9228316 ggcgattgtcactgcttatg 9228335 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 9164308 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 9164364 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164365 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 9164424 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164425 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 9164484 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164485 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 9164544 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164545 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 9164604 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164605 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 9164664 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164665 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 9164724 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164725 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 9164784 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164785 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 9164844 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 9164845 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 9164904 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 9164905 ggcgattgtcactgcttatg 9164924 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 9056133 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 9056189 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056190 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 9056249 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056250 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 9056309 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056310 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 9056369 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056370 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 9056429 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9056430 tacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccac 9056489 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056490 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 9056549 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056550 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 9056609 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056610 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 9056669 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 9056670 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 9056729 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 9056730 ggcgattgtcactgcttatg 9056749 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 383 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 442 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 443 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 489 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 19938204 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 19938260 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938261 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 19938320 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938321 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 19938380 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938381 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 19938440 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938441 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 19938500 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938501 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 19938560 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938561 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 19938620 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938621 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 19938680 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938681 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 19938740 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 19938741 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 19938800 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 19938801 ggcgattgtcactgcttatg 19938820 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 10277227 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 10277171 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277170 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 10277111 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277110 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 10277051 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277050 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 10276991 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276990 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 10276931 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276930 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 10276871 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276870 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 10276811 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276810 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 10276751 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276750 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 10276691 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 10276690 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 10276631 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 10276630 ggcgattgtcactgcttatg 10276611 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 10387071 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 10387127 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387128 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 10387187 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387188 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 10387247 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387248 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 10387307 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387308 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 10387367 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387368 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 10387427 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387428 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 10387487 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387488 agaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 10387547 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387548 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 10387607 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 10387608 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 10387667 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 10387668 ggcgattgtcactgcttatg 10387687 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 401 agtaccgtgagggaaaggtgaaaagaacccc 431 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 ttgtgctgctaggcgaagcggttgagtgc 254 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 31598386 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 31598442 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598443 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 31598502 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598503 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 31598562 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598563 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 31598622 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598623 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 31598682 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598683 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 31598742 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598743 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 31598802 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598803 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 31598862 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598863 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 31598922 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 31598923 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 31598982 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 31598983 ggcgattgtcactgcttatg 31599002
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 33525702 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 33525758 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525759 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 33525818 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525819 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 33525878 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525879 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 33525938 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525939 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 33525998 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525999 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 33526058 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526059 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 33526118 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526119 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 33526178 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526179 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 33526238 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 33526239 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 33526298 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 33526299 ggcgattgtcactgcttatg 33526318 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 405 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 464 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 465 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 524 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 525 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 419 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 478 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 479 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 528 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 431 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 431 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 412 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 450 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 47839 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 47783 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47782 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 47723 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47722 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 47663 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47662 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 47603 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47602 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 47543 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47542 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 47483 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47482 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 47423 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47422 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 47363 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47362 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 47303 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 47302 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 47243 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 47242 ggcgattgtcactgcttatg 47223
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 70899 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 70955 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70956 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 71015 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71016 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 71075 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71076 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 71135 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71136 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 71195 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71196 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 71255 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71256 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 71315 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71316 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 71375 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71376 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 71435 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 71436 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 71495 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 71496 ggcgattgtcactgcttatg 71515 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 431 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 431 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 71 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 127 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 187 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 247 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 307 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 367 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 427 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 487 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 488 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 547 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 607 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 608 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 667 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 668 ggcgattgtcactgcttatg 687
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 19949480 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 19949536 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949537 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 19949596 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949597 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 19949656 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949657 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 19949716 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949717 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 19949776 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949777 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 19949836 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949837 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 19949896 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949897 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 19949956 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949957 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 19950016 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 19950017 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 19950076 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 19950077 ggcgattgtcactgcttatg 19950096 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 10283266 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 10283210 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283209 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 10283150 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283149 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 10283090 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283089 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 10283030 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283029 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 10282970 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282969 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 10282910 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282909 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 10282850 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282849 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 10282790 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282789 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 10282730 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 10282729 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 10282670 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 10282669 ggcgattgtcactgcttatg 10282650 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 10393110 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 10393166 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393167 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 10393226 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393227 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 10393286 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393287 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 10393346 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393347 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 10393406 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393407 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 10393466 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393467 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 10393526 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393527 agaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 10393586 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393587 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 10393646 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 10393647 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 10393706 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 10393707 ggcgattgtcactgcttatg 10393726 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 431 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 226 ttgtgctgctaggcgaagcggttgagtgc 254 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 119807 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 119751 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119750 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 119691 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119690 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 119631 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119630 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 119571 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119570 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 119511 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119510 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 119451 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119450 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 119391 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119390 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 119331 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119330 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 119271 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 119270 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 119211 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 119210 ggcgattgtcactgcttatg 119191 Score = 1158 bits (584), Expect = 0.0 Identities = 614/620 (99%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 95232 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 95288 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95289 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 95348 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95349 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 95408 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95409 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 95468 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95469 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 95528 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95529 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 95588 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95589 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 95648 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95649 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 95708 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95709 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 95768 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 95769 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 95828 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 95829 ggcgattgtcactgcttatg 95848
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 910 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 854 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 853 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 794 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 734 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 733 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 674 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 673 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 614 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 554 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 494 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 434 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 374 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 373 cagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatag 314 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 313 ggcgattgtcactgcttatg 294
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 140867 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 140923 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140924 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 140983 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140984 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 141043 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141044 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 141103 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141104 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 141163 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 141164 tacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccac 141223 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141224 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 141283 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141284 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 141343 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141344 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 141403 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 141404 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 141463 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 141464 ggcgattgtcactgcttatg 141483
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 93463 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 93519 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93520 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 93579 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93580 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 93639 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93640 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 93699 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93700 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 93759 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93760 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 93819 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93820 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 93879 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93880 agaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 93939 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93940 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 93999 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 94000 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 94059 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 94060 ggcgattgtcactgcttatg 94079
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 20294 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 20350 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20351 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 20410 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20411 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 20470 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20471 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 20530 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20531 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 20590 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20591 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 20650 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20651 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 20710 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20711 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 20770 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20771 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 20830 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 20831 cagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatag 20890 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 20891 ggcgattgtcactgcttatg 20910 Score = 1134 bits (572), Expect = 0.0 Identities = 611/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 44824 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 44768 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44767 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 44708 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44707 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 44648 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44647 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 44588 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44587 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 44528 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44527 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 44468 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44467 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 44408 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44407 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 44348 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44347 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 44288 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| |||| Sbjct: 44287 cagtggcttggttaagggaatggaaccctccggagccgtagtgaaagcgagtcttcatag 44228 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 44227 ggcgattgtcactgcttatg 44208
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1453 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 1397 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1396 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 1337 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1336 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 1277 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1276 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 1217 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1216 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 1157 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1156 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 1097 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1096 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 1037 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1036 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 977 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 976 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 917 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 916 cagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatag 857 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 856 ggcgattgtcactgcttatg 837
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 27527 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 27583 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27584 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 27643 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27644 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 27703 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27704 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 27763 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27764 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 27823 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27824 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 27883 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27884 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 27943 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27944 agaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 28003 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28004 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 28063 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 28064 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 28123 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 28124 ggcgattgtcactgcttatg 28143
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 123663 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 123607 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123606 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 123547 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123546 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 123487 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123486 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 123427 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123426 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 123367 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123366 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 123307 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123306 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 123247 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123246 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 123187 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123186 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123127 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 123126 cagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatag 123067 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 123066 ggcgattgtcactgcttatg 123047 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 99174 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 99230 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99231 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 99290 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99291 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 99350 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99351 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 99410 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99411 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 99470 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99471 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 99530 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99531 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 99590 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99591 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 99650 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99651 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 99710 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 99711 cagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatag 99770 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 99771 ggcgattgtcactgcttatg 99790
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 124380 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 124324 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124323 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 124264 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124263 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 124204 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124203 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 124144 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124143 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 124084 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124083 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 124024 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124023 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 123964 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123963 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 123904 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123903 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123844 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 123843 cagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatag 123784 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 123783 ggcgattgtcactgcttatg 123764 Score = 1150 bits (580), Expect = 0.0 Identities = 613/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 99851 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 99907 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99908 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 99967 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99968 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 100027 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100028 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 100087 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100088 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 100147 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100148 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 100207 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100208 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 100267 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100268 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 100327 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100328 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 100387 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 100388 cagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatag 100447 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 100448 ggcgattgtcactgcttatg 100467
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1142 bits (576), Expect = 0.0 Identities = 612/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 9242062 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 9242006 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242005 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 9241946 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9241945 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggag 9241886 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241885 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 9241826 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241825 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 9241766 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241765 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 9241706 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241705 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 9241646 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241645 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 9241586 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9241585 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcatagg 9241526 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 9241525 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 9241466 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 9241465 ggcgattgtcactgcttatg 9241446 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 108 actgaaacatcttagtagccagaggaaaagaaag 141 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1142 bits (576), Expect = 0.0 Identities = 612/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 53275 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 53219 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53218 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 53159 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 53158 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggag 53099 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53098 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 53039 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53038 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 52979 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52978 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 52919 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52918 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 52859 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52858 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 52799 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 52798 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcatagg 52739 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 52738 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatag 52679 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 52678 ggcgattgtcactgcttatg 52659
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1130 bits (570), Expect = 0.0 Identities = 586/590 (99%), Gaps = 1/590 (0%) Strand = Plus / Plus Query: 31 atccggagnattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 90 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 6 atccggag-attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 64 Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 124 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 184 Query: 211 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 244 Query: 271 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 330 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 245 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 304 Query: 331 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 364 Query: 391 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 424 Query: 451 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 484 Query: 511 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 544 Query: 571 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 545 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 594
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1122 bits (566), Expect = 0.0 Identities = 585/590 (99%), Gaps = 1/590 (0%) Strand = Plus / Plus Query: 31 atccggagnattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 90 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2 atccggag-attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 211 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 271 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 330 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 331 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 391 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 451 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 511 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 540 Query: 571 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 541 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 590
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1102 bits (556), Expect = 0.0 Identities = 608/620 (98%), Gaps = 4/620 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 123602 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 123546 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123545 ttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 123486 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123485 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 123426 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 123425 cagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcg 123366 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| Sbjct: 123365 aagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gct 123307 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123306 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 123247 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123246 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 123187 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123186 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 123127 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123126 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 123067 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 123066 cagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatag 123007 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 123006 ggcgattgtcactgcttatg 122987 Score = 1102 bits (556), Expect = 0.0 Identities = 608/620 (98%), Gaps = 4/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 99135 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 99191 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99192 ttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 99251 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99252 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 99311 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 99312 cagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcg 99371 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| Sbjct: 99372 aagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gct 99430 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99431 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 99490 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99491 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 99550 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99551 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 99610 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99611 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 99670 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 99671 cagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatag 99730 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 99731 ggcgattgtcactgcttatg 99750
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1102 bits (556), Expect = 0.0 Identities = 608/620 (98%), Gaps = 4/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 5488 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 5544 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5545 ttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 5604 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5605 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 5664 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5665 cagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcg 5724 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| Sbjct: 5725 aagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gct 5783 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5784 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 5843 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5844 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 5903 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5904 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 5963 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5964 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 6023 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 6024 cagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatag 6083 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 6084 ggcgattgtcactgcttatg 6103
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1102 bits (556), Expect = 0.0 Identities = 608/620 (98%), Gaps = 4/620 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 76 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 132 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 ttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 192 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 252 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 253 cagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcg 312 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| Sbjct: 313 aagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gct 371 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 431 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 491 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 551 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 611 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 612 cagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatag 671 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 672 ggcgattgtcactgcttatg 691
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1051 bits (530), Expect = 0.0 Identities = 557/562 (99%), Gaps = 3/562 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 68 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 124 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 184 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 244 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 304 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 364 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 424 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 484 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 544 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 604 Query: 541 cagtggcttggttaagggaacg 562 |||||||||||||||||||||| Sbjct: 605 cagtggcttggttaagggaacg 626
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1033 bits (521), Expect = 0.0 Identities = 554/561 (98%), Gaps = 3/561 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 28 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 84 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 144 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 204 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 205 cagcctaaaccgtgaaaacggggttgtgggagagcagtacaagcgttgtgctgctaggcg 264 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 324 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 384 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 444 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 504 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 gggaggggaaattgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 564 Query: 541 cagtggcttggttaagggaac 561 ||||||||||||||||||||| Sbjct: 565 cagtggcttggttaagggaac 585
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 963 bits (486), Expect = 0.0 Identities = 489/490 (99%) Strand = Plus / Plus Query: 64 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 124 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 184 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 244 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 303 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 304 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 364 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 424 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 484 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 480 Query: 544 tggcttggtt 553 |||||||||| Sbjct: 481 tggcttggtt 490
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 944 bits (476), Expect = 0.0 Identities = 482/484 (99%) Strand = Plus / Plus Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 197 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 257 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 316 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 317 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 377 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 437 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 420 Query: 557 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 616 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 421 ggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgct 480 Query: 617 tatg 620 |||| Sbjct: 481 tatg 484
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 940 bits (474), Expect = 0.0 Identities = 480/482 (99%) Strand = Plus / Plus Query: 139 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 199 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 259 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 318 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 319 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 379 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 439 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 559 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 618 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 480 Query: 619 tg 620 || Sbjct: 481 tg 482
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 940 bits (474), Expect = 0.0 Identities = 480/482 (99%) Strand = Plus / Plus Query: 139 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 199 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 259 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 318 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 319 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 379 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 439 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 559 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 618 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 480 Query: 619 tg 620 || Sbjct: 481 tg 482
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 940 bits (474), Expect = 0.0 Identities = 588/620 (94%), Gaps = 12/620 (1%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 134150 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 134094 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134093 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 134035 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134034 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 133975 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 133974 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 133915 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || || ||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 133914 aagcagtggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagct 133855 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133854 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 133795 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133794 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 133735 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 133734 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 133678 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133677 gggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 133618 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 133617 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 133563 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 133562 ggcgattgtcactgcttatg 133543 Score = 940 bits (474), Expect = 0.0 Identities = 588/620 (94%), Gaps = 12/620 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 103821 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 103877 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 103878 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 103936 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103937 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 103996 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 103997 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 104056 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || || ||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 104057 aagcagtggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagct 104116 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104117 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 104176 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104177 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 104236 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 104237 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 104293 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104294 gggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 104353 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 104354 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 104408 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 104409 ggcgattgtcactgcttatg 104428
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 938 bits (473), Expect = 0.0 Identities = 479/481 (99%) Strand = Plus / Plus Query: 140 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 200 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 260 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 319 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 320 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 380 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 440 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 Query: 560 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 619 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 421 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 480 Query: 620 g 620 | Sbjct: 481 g 481
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 938 bits (473), Expect = 0.0 Identities = 479/481 (99%) Strand = Plus / Plus Query: 140 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 200 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 260 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 319 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 320 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 380 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 440 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 423 Query: 560 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 619 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 424 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 483 Query: 620 g 620 | Sbjct: 484 g 484
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 934 bits (471), Expect = 0.0 Identities = 477/479 (99%) Strand = Plus / Plus Query: 142 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 202 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 262 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 321 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 322 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 382 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 442 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 502 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 420 Query: 562 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 421 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 479
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 924 bits (466), Expect = 0.0 Identities = 586/620 (94%), Gaps = 12/620 (1%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 139513 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 139457 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 139456 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 139398 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139397 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 139338 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 139337 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 139278 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| |||| | |||||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 139277 aagcggtggagtactgcaccctagatggcgagagtccagtagccgaaagcatcactggct 139218 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139217 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 139158 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139157 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 139098 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||| Sbjct: 139097 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagt 139041 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139040 gggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 138981 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| Sbjct: 138980 cagtggcttggttaag-----ggaacccaccggagccatagcgaaagcgagtcttcatag 138926 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 138925 ggcaattgtcactgcttatg 138906 Score = 924 bits (466), Expect = 0.0 Identities = 586/620 (94%), Gaps = 12/620 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 110432 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 110488 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 110489 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 110547 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110548 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 110607 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110608 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 110667 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| |||| | |||||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 110668 aagcggtggagtactgcaccctagatggcgagagtccagtagccgaaagcatcactggct 110727 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110728 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 110787 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110788 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 110847 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||| Sbjct: 110848 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagt 110904 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110905 gggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 110964 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| Sbjct: 110965 cagtggcttggttaag-----ggaacccaccggagccatagcgaaagcgagtcttcatag 111019 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 111020 ggcaattgtcactgcttatg 111039
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 924 bits (466), Expect = 0.0 Identities = 586/620 (94%), Gaps = 12/620 (1%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 127791 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 127735 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 127734 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 127676 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 127675 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggag 127616 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 127615 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcg 127556 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| |||||| |||||||||||||| | |||||||||||||||| ||||||||||| Sbjct: 127555 aagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagct 127496 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127495 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 127436 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127435 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 127376 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||||| |||||||||||||| Sbjct: 127375 aaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagt 127319 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127318 gggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 127259 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| |||||| |||||||||||||||||||||| |||| Sbjct: 127258 cagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatag 127204 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 127203 ggcgattgtcactgcttatg 127184 Score = 924 bits (466), Expect = 0.0 Identities = 586/620 (94%), Gaps = 12/620 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 107131 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 107187 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107188 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 107246 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 107247 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggag 107306 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 107307 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcg 107366 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| |||||| |||||||||||||| | |||||||||||||||| ||||||||||| Sbjct: 107367 aagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagct 107426 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107427 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 107486 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107487 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 107546 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||||| |||||||||||||| Sbjct: 107547 aaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagt 107603 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107604 gggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 107663 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||||||| |||||| |||||||||||||||||||||| |||| Sbjct: 107664 cagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatag 107718 Query: 601 ggcgattgtcactgcttatg 620 |||||||||||||||||||| Sbjct: 107719 ggcgattgtcactgcttatg 107738
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 916 bits (462), Expect = 0.0 Identities = 585/620 (94%), Gaps = 12/620 (1%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| ||| |||||||||| Sbjct: 142035 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatgggtcaacctt 141979 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 141978 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 141920 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141919 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 141860 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 141859 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 141800 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||| | |||||||||||||| | ||||||||| |||||||||||||| ||| Sbjct: 141799 aagcggttgagtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggct 141740 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141739 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 141680 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141679 cttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 141620 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||| Sbjct: 141619 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagt 141563 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141562 gggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 141503 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 141502 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 141448 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 141447 ggcaattgtcactgcttatg 141428 Score = 916 bits (462), Expect = 0.0 Identities = 585/620 (94%), Gaps = 12/620 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| ||| |||||||||| Sbjct: 111622 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatgggtcaacctt 111678 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111679 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 111737 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111738 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 111797 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 111798 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 111857 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||| | |||||||||||||| | ||||||||| |||||||||||||| ||| Sbjct: 111858 aagcggttgagtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggct 111917 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111918 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 111977 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111978 cttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 112037 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||| Sbjct: 112038 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagt 112094 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112095 gggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 112154 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 112155 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 112209 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 112210 ggcaattgtcactgcttatg 112229
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 914 bits (461), Expect = 0.0 Identities = 585/620 (94%), Gaps = 16/620 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 134908 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 134852 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134851 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 134793 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134792 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 134733 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134732 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 134673 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || |||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 134672 aagcagtggagtgctgcaccctagatggctagagtccagtagccgaaagcatcactagct 134613 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134612 tacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 134553 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134552 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 134493 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||| Sbjct: 134492 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagt 134436 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134435 gggaggagaa----atctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 134380 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 134379 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 134325 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 134324 ggcaattgtcactgcttatg 134305 Score = 914 bits (461), Expect = 0.0 Identities = 585/620 (94%), Gaps = 16/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 105374 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 105430 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105431 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 105489 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105490 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 105549 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105550 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 105609 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || |||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105610 aagcagtggagtgctgcaccctagatggctagagtccagtagccgaaagcatcactagct 105669 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105670 tacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 105729 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105730 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 105789 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||| Sbjct: 105790 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagt 105846 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105847 gggaggagaa----atctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 105902 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 105903 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 105957 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 105958 ggcaattgtcactgcttatg 105977
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 910 bits (459), Expect = 0.0 Identities = 585/620 (94%), Gaps = 14/620 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 136518 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 136462 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136461 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 136403 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136402 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 136343 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 136342 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 136283 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| |||||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 136282 aagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagct 136223 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136222 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 136163 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 136162 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 136103 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 136102 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 136046 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136045 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 135988 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 135987 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 135933 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 135932 ggcaattgtcactgcttatg 135913 Score = 910 bits (459), Expect = 0.0 Identities = 585/620 (94%), Gaps = 14/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 105907 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 105963 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105964 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106022 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106023 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106082 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106083 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 106142 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| |||||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 106143 aagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagct 106202 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106203 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 106262 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106263 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 106322 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 106323 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 106379 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106380 gggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 106437 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 106438 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 106492 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 106493 ggcaattgtcactgcttatg 106512
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 892 bits (450), Expect = 0.0 Identities = 583/620 (94%), Gaps = 13/620 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| ||||||| |||||| Sbjct: 132702 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggttaacctt 132646 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 132645 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 132587 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132586 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 132527 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 132526 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 132467 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || || ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 132466 aagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagct 132407 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132406 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 132347 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 132346 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 132287 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 132286 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 132230 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132229 gggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 132171 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 132170 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 132116 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 132115 ggcaattgtcactgcttatg 132096 Score = 892 bits (450), Expect = 0.0 Identities = 583/620 (94%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| ||||||| |||||| Sbjct: 104176 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggttaacctt 104232 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104233 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 104291 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104292 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 104351 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104352 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 104411 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || || ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 104412 aagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagct 104471 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104472 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 104531 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104532 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 104591 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 104592 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 104648 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104649 gggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 104707 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 104708 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 104762 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 104763 ggcaattgtcactgcttatg 104782
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 892 bits (450), Expect = 0.0 Identities = 583/620 (94%), Gaps = 13/620 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| ||||||| |||||| Sbjct: 132925 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggttaacctt 132869 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 132868 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 132810 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132809 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 132750 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 132749 cagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcg 132690 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 132689 aagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagct 132630 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132629 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 132570 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 132569 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 132510 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 132509 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 132453 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132452 gggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 132394 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 132393 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 132339 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 132338 ggcaattgtcactgcttatg 132319 Score = 892 bits (450), Expect = 0.0 Identities = 583/620 (94%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| ||||||| |||||| Sbjct: 103839 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggttaacctt 103895 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 103896 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 103954 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103955 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 104014 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 104015 cagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcg 104074 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 104075 aagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagct 104134 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104135 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 104194 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104195 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 104254 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 104255 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 104311 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104312 gggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 104370 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 104371 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 104425 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 104426 ggcaattgtcactgcttatg 104445
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 892 bits (450), Expect = 0.0 Identities = 583/620 (94%), Gaps = 13/620 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| ||||||| |||||| Sbjct: 132695 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggttaacctt 132639 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 132638 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 132580 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132579 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 132520 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 132519 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 132460 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || || ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 132459 aagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagct 132400 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132399 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 132340 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 132339 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 132280 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 132279 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 132223 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132222 gggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 132164 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 132163 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 132109 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 132108 ggcaattgtcactgcttatg 132089 Score = 892 bits (450), Expect = 0.0 Identities = 583/620 (94%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| ||||||| |||||| Sbjct: 104174 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggttaacctt 104230 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104231 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 104289 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104290 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 104349 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104350 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 104409 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || || ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 104410 aagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagct 104469 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104470 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 104529 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104530 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 104589 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 104590 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 104646 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104647 gggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 104705 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 104706 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 104760 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 104761 ggcaattgtcactgcttatg 104780
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 884 bits (446), Expect = 0.0 Identities = 582/620 (93%), Gaps = 13/620 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| ||||||| |||||| Sbjct: 131594 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggttaacctt 131538 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 131537 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 131479 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131478 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 131419 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131418 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 131359 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || || ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 131358 aagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagct 131299 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131298 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 131239 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 131238 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 131179 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 131178 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 131122 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131121 gggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 131063 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 131062 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 131008 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 131007 ggcaattgtcactgcttatg 130988 Score = 884 bits (446), Expect = 0.0 Identities = 582/620 (93%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| ||||||| |||||| Sbjct: 103041 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggttaacctt 103097 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 103098 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 103156 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103157 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 103216 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 103217 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 103276 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || || ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 103277 aagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagct 103336 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103337 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 103396 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 103397 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 103456 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 103457 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 103513 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103514 gggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 103572 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 103573 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 103627 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 103628 ggcaattgtcactgcttatg 103647
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 884 bits (446), Expect = 0.0 Identities = 582/620 (93%), Gaps = 13/620 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| ||||||| |||||| Sbjct: 133886 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggttaacctt 133830 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 133829 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 133771 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133770 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 133711 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 ||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||| Sbjct: 133710 cagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcg 133651 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 133650 aagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagct 133591 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133590 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 133531 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 133530 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 133471 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 133470 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 133414 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133413 gggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 133355 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 133354 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 133300 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 133299 ggcaattgtcactgcttatg 133280 Score = 884 bits (446), Expect = 0.0 Identities = 582/620 (93%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| ||||||| |||||| Sbjct: 104763 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggttaacctt 104819 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104820 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 104878 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104879 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 104938 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 ||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||| Sbjct: 104939 cagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcg 104998 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 104999 aagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagct 105058 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105059 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 105118 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105119 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 105178 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 105179 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 105235 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105236 gggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 105294 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 105295 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 105349 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 105350 ggcaattgtcactgcttatg 105369
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 876 bits (442), Expect = 0.0 Identities = 581/620 (93%), Gaps = 13/620 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 140287 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 140231 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 140230 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 140172 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140171 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 140112 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 140111 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 140052 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||| || ||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 140051 aagcggcggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagct 139992 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139991 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 139932 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 139931 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 139872 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | || ||||||||||| Sbjct: 139871 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagt 139815 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139814 gggaggag-acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 139756 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 139755 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 139701 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 139700 ggcaattgtcactgcttatg 139681 Score = 876 bits (442), Expect = 0.0 Identities = 581/620 (93%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 109773 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 109829 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 109830 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 109888 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109889 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 109948 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 109949 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 110008 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||| || ||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 110009 aagcggcggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagct 110068 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110069 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 110128 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 110129 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 110188 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | || ||||||||||| Sbjct: 110189 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagt 110245 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110246 gggaggag-acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 110304 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 110305 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 110359 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 110360 ggcaattgtcactgcttatg 110379
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 876 bits (442), Expect = 0.0 Identities = 581/620 (93%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| ||||||| |||||| Sbjct: 72 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggttaacctt 128 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 129 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 187 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 247 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 ||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||| Sbjct: 248 cagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcg 307 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| ||||||||||||||||||||| | |||||||||||||| ||||||||||||| Sbjct: 308 aagcggtggagtgccgcaccctagatggcgagagtccagtagccgagagcatcactagct 367 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 427 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 428 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 487 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 488 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 544 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 gggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 603 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 604 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 658 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 659 ggcaattgtcactgcttatg 678
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 136227 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 136171 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136170 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 136112 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136111 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 136052 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 136051 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 135992 Query: 241 aagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135991 aagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 135932 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135931 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 135872 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135871 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 135812 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 135811 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 135755 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135754 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 135697 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 135696 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 135642 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 135641 gggcaattgtcactgcttatg 135621 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 106403 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 106459 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106460 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106518 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106519 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106578 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106579 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 106638 Query: 241 aagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106639 aagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 106698 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106699 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 106758 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106759 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 106818 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 106819 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 106875 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106876 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106933 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 106934 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 106988 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 106989 gggcaattgtcactgcttatg 107009
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 136865 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 136809 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136808 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 136750 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136749 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 136690 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 136689 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 136630 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 136629 aagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 136570 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136569 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 136510 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 136509 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 136450 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 136449 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 136393 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136392 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 136335 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 136334 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 136280 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 136279 gggcaattgtcactgcttatg 136259 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 106692 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 106748 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106749 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106807 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106808 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106867 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106868 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 106927 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106928 aagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 106987 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106988 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 107047 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107048 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 107107 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 107108 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 107164 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107165 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 107222 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 107223 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 107277 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 107278 gggcaattgtcactgcttatg 107298
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 1597 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 1653 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1654 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 1712 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1713 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 1772 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1773 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 1832 Query: 241 aagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1833 aagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 1892 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1893 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 1952 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1953 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 2012 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 2013 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 2069 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2070 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 2127 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 2128 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 2182 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 2183 gggcaattgtcactgcttatg 2203
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 135473 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 135417 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135416 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135358 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135357 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135298 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135297 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 135238 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135237 aagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 135178 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135177 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 135118 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135117 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 135058 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 135057 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 135001 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135000 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 134943 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 134942 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 134888 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 134887 gggcaattgtcactgcttatg 134867 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 105563 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 105619 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105620 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 105678 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105679 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 105738 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105739 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 105798 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105799 aagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 105858 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105859 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 105918 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 105919 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 105978 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 105979 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 106035 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106036 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106093 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 106094 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 106148 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 106149 gggcaattgtcactgcttatg 106169
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 135608 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 135552 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135551 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135493 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135492 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135433 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135432 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 135373 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135372 aagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 135313 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135312 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 135253 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135252 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 135193 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 135192 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 135136 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135135 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 135078 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 135077 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 135023 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 135022 gggcaattgtcactgcttatg 135002 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 105735 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 105791 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105792 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 105850 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105851 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 105910 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105911 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 105970 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105971 aagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 106030 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106031 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 106090 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106091 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 106150 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 106151 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 106207 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106208 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106265 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 106266 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 106320 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 106321 gggcaattgtcactgcttatg 106341
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 135606 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 135550 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135549 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135491 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135490 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135431 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135430 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 135371 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135370 aagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 135311 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135310 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 135251 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135250 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 135191 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 135190 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 135134 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135133 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 135076 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 135075 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 135021 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 135020 gggcaattgtcactgcttatg 135000 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 105732 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 105788 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105789 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 105847 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105848 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 105907 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105908 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 105967 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105968 aagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 106027 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106028 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 106087 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106088 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 106147 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 106148 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 106204 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106205 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106262 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 106263 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 106317 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 106318 gggcaattgtcactgcttatg 106338
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 135518 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 135462 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135461 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135403 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135402 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135343 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135342 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 135283 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135282 aagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 135223 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135222 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 135163 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135162 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 135103 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 135102 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 135046 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135045 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 134988 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 134987 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 134933 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 134932 gggcaattgtcactgcttatg 134912 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 105610 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 105666 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105667 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 105725 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105726 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 105785 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105786 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 105845 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105846 aagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 105905 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105906 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 105965 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 105966 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 106025 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 106026 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 106082 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106083 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106140 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 106141 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 106195 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 106196 gggcaattgtcactgcttatg 106216
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 136225 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 136169 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136168 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 136110 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136109 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 136050 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 136049 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 135990 Query: 241 aagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135989 aagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 135930 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135929 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 135870 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135869 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 135810 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 135809 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 135753 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135752 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 135695 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 135694 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 135640 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 135639 gggcaattgtcactgcttatg 135619 Score = 872 bits (440), Expect = 0.0 Identities = 582/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 106401 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 106457 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106458 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106516 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106517 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106576 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106577 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 106636 Query: 241 aagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106637 aagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 106696 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106697 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 106756 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106757 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 106816 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 106817 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 106873 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106874 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106931 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 106932 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 106986 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 106987 gggcaattgtcactgcttatg 107007
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 868 bits (438), Expect = 0.0 Identities = 580/620 (93%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 81 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 316 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || |||||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 317 aagcagtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagct 376 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 436 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 437 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 496 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 497 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 553 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 gggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 612 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 613 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcgtag 667 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 668 ggcaattgtcactgcttatg 687
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 866 bits (437), Expect = 0.0 Identities = 581/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||| | |||||| |||||| ||||||| Sbjct: 135956 tgcttcgggg-agttgaaaataagcatag-atccgg-ggattcccgaatagggcaacctt 135900 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135899 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135841 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135840 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135781 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135780 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 135721 Query: 241 aagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135720 aagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 135661 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135660 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 135601 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135600 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 135541 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 135540 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 135484 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135483 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 135426 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 135425 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 135371 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 135370 gggcaattgtcactgcttatg 135350 Score = 866 bits (437), Expect = 0.0 Identities = 581/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||| | |||||| |||||| ||||||| Sbjct: 106182 tgcttcgggg-agttgaaaataagcatag-atccgg-ggattcccgaatagggcaacctt 106238 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106239 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106297 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106298 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106357 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106358 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 106417 Query: 241 aagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106418 aagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 106477 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106478 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 106537 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106538 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 106597 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 106598 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 106654 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106655 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 106712 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 106713 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 106767 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 106768 gggcaattgtcactgcttatg 106788
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 864 bits (436), Expect = 0.0 Identities = 581/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 135485 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 135429 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135428 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135370 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135369 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135310 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135309 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 135250 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135249 aagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 135190 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135189 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 135130 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135129 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 135070 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 135069 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 135013 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135012 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaatag 134955 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 134954 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 134900 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 134899 gggcaattgtcactgcttatg 134879 Score = 864 bits (436), Expect = 0.0 Identities = 581/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 105577 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 105633 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105634 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 105692 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105693 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 105752 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105753 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 105812 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105813 aagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 105872 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105873 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 105932 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 105933 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 105992 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 105993 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 106049 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106050 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaatag 106107 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 106108 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 106162 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 106163 gggcaattgtcactgcttatg 106183
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 860 bits (434), Expect = 0.0 Identities = 579/620 (93%), Gaps = 13/620 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| ||||||||||||||| || |||||||| |||||| |||||||||||||| Sbjct: 131718 tgcttcgggg-agttgaaaataagcagag-atccggag-attcccgaataggtcaacctt 131662 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 131661 tcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 131603 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131602 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 131543 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131542 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 131483 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 || | || |||||| | ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 131482 aatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagct 131423 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131422 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 131363 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 131362 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 131303 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | ||||| |||||||| Sbjct: 131302 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagt 131246 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131245 gggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 131187 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 131186 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 131132 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 131131 ggcaattgtcactgcttatg 131112 Score = 860 bits (434), Expect = 0.0 Identities = 579/620 (93%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| ||||||||||||||| || |||||||| |||||| |||||||||||||| Sbjct: 101727 tgcttcgggg-agttgaaaataagcagag-atccggag-attcccgaataggtcaacctt 101783 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 101784 tcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 101842 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101843 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 101902 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 101903 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 101962 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 || | || |||||| | ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 101963 aatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagct 102022 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102023 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 102082 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 102083 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 102142 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | ||||| |||||||| Sbjct: 102143 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagt 102199 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||||| | || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 102200 gggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 102258 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 102259 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 102313 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 102314 ggcaattgtcactgcttatg 102333
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 854 bits (431), Expect = 0.0 Identities = 580/621 (93%), Gaps = 14/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 73 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 129 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 130 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctaacgaactgaaacatctt 188 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatggga 179 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 189 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatggga 248 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 239 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 249 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 308 Query: 240 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 309 gaagcggtgaagtgccgaaccctagatggctagagtccagtagccgaaagcatcactagc 368 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 428 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 429 ccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggt 488 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 489 gaaaagaacccccaccggggagtgaaatagaacatgaaaccg---taagctcccaagcag 545 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | | | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 tgggaggagcctg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 604 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 605 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 659 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 660 gggcaattgtcactgcttatg 680
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 852 bits (430), Expect = 0.0 Identities = 578/620 (93%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| ||||| |||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 106078 tgcttcgggg-agttgcaaataagcgtag-atccggag-attcccgaataggtcaacctt 106134 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106135 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106193 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106194 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106253 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106254 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 106313 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || ||||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 106314 aagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagct 106373 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106374 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 106433 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 106434 cttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtg 106493 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||| ||||||||| Sbjct: 106494 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagt 106550 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106551 gggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 106609 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| || | Sbjct: 106610 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatgg 106664 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 106665 ggcaattgtcactgcttatg 106684 Score = 803 bits (405), Expect = 0.0 Identities = 577/623 (92%), Gaps = 16/623 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| ||||| |||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 135831 tgcttcgggg-agttgcaaataagcgtag-atccggag-attcccgaataggtcaacctt 135775 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135774 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135716 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135715 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135656 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgctaggc 239 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 135655 cagcctaaaccgtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggc 135596 Query: 240 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 ||||| || ||||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 135595 gaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagc 135536 Query: 300 ttatg-ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag-caaggac 357 ||| | | |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135535 ttacgcccctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagccaaggac 135476 Query: 358 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 417 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 135475 caccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagg 135416 Query: 418 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 477 |||||||||||||||| ||| ||||||||||||| |||||||| | |||| |||||| Sbjct: 135415 gtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagc 135359 Query: 478 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 537 ||||||||| | | | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135358 agtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcat 135300 Query: 538 aggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaa 597 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 135299 aggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttca 135245 Query: 598 tagggcgattgtcactgcttatg 620 | |||| |||||||||||||||| Sbjct: 135244 tggggcaattgtcactgcttatg 135222
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 852 bits (430), Expect = 0.0 Identities = 578/620 (93%), Gaps = 13/620 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| ||||| |||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 136107 tgcttcgggg-agttgcaaataagcgtag-atccggag-attcccgaataggtcaacctt 136051 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136050 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135992 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135991 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135932 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135931 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 135872 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || ||||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 135871 aagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagct 135812 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135811 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 135752 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 135751 cttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtg 135692 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||| ||||||||| Sbjct: 135691 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagt 135635 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135634 gggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 135576 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| || | Sbjct: 135575 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatgg 135521 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 135520 ggcaattgtcactgcttatg 135501 Score = 852 bits (430), Expect = 0.0 Identities = 578/620 (93%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| ||||| |||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 106300 tgcttcgggg-agttgcaaataagcgtag-atccggag-attcccgaataggtcaacctt 106356 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106357 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106415 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106416 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106475 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106476 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 106535 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || ||||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 106536 aagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagct 106595 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106596 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 106655 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 106656 cttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtg 106715 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||| ||||||||| Sbjct: 106716 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagt 106772 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106773 gggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 106831 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| || | Sbjct: 106832 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatgg 106886 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 106887 ggcaattgtcactgcttatg 106906
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 848 bits (428), Expect = 0.0 Identities = 580/621 (93%), Gaps = 16/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 48 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 104 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 163 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 223 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 224 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 283 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | ||| ||| |||||| | ||||| ||||||||||||||||||||||||||||| Sbjct: 284 aagcagcctgaatgctgcaccc-atatggcgaaagtccagtagccgaaagcatcactagc 342 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 402 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 403 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 462 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 463 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 519 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 577 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 578 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 632 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 633 gggcaattgtcactgcttatg 653
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 841 bits (424), Expect = 0.0 Identities = 578/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 139431 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 139375 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 139374 tcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatctt 139316 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139315 agtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 139256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 139255 cagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcg 139196 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| ||||||| |||||||||||| | |||||||||||||||||||||||||||| Sbjct: 139195 aagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagct 139136 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139135 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 139076 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 139075 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 139016 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 139015 aaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 138959 Query: 481 gggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 |||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138958 gggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 138901 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 138900 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 138846 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 138845 gggcaattgtcactgcttatg 138825 Score = 841 bits (424), Expect = 0.0 Identities = 578/621 (93%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 109666 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 109722 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 109723 tcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatctt 109781 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109782 agtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 109841 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 109842 cagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcg 109901 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| ||||||| |||||||||||| | |||||||||||||||||||||||||||| Sbjct: 109902 aagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagct 109961 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109962 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 110021 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 110022 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 110081 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 110082 aaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 110138 Query: 481 gggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 |||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110139 gggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 110196 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 110197 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 110251 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 110252 gggcaattgtcactgcttatg 110272
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 837 bits (422), Expect = 0.0 Identities = 579/623 (92%), Gaps = 15/623 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 139640 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 139584 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 139583 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 139525 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139524 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 139465 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 139464 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 139405 Query: 241 aagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| || || ||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 139404 aagcagtgcgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagc 139345 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139344 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 139285 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 139284 ccttgcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggt 139225 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 139224 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 139168 Query: 480 tgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 537 ||||||| || | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139167 tgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcat 139108 Query: 538 aggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaa 597 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 139107 aggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttca 139053 Query: 598 tagggcgattgtcactgcttatg 620 |||||| |||||||||||||||| Sbjct: 139052 tagggcaattgtcactgcttatg 139030 Score = 837 bits (422), Expect = 0.0 Identities = 579/623 (92%), Gaps = 15/623 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 109659 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 109715 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 109716 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 109774 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109775 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 109834 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 109835 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 109894 Query: 241 aagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| || || ||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 109895 aagcagtgcgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagc 109954 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109955 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 110014 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 110015 ccttgcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggt 110074 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 110075 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 110131 Query: 480 tgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 537 ||||||| || | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110132 tgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcat 110191 Query: 538 aggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaa 597 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 110192 aggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttca 110246 Query: 598 tagggcgattgtcactgcttatg 620 |||||| |||||||||||||||| Sbjct: 110247 tagggcaattgtcactgcttatg 110269
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 829 bits (418), Expect = 0.0 Identities = 580/623 (93%), Gaps = 17/623 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 1839 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 1895 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1896 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccatctt 1954 Query: 121 agtagccagaggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatggga 179 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1955 agtagccagaggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatggga 2014 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt-gtgctgctagg 238 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2015 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctagg 2074 Query: 239 cgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta 297 |||||| | || ||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2075 cgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcacta 2134 Query: 298 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2135 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 2194 Query: 358 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2195 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagg 2254 Query: 418 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 477 |||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||| Sbjct: 2255 gtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagc 2311 Query: 478 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 537 ||||||||| | || | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2312 agtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 2369 Query: 538 aggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaa 597 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 2370 aggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttca 2424 Query: 598 tagggcgattgtcactgcttatg 620 |||||| |||||||||||||||| Sbjct: 2425 tagggcaattgtcactgcttatg 2447
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 825 bits (416), Expect = 0.0 Identities = 443/448 (98%), Gaps = 3/448 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 72 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 128 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 188 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 248 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 308 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 368 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 428 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 488 Query: 421 aaaagaacccccagtgggtagtgaaata 448 |||||||||||||||||||||||||||| Sbjct: 489 aaaagaacccccagtgggtagtgaaata 516
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 819 bits (413), Expect = 0.0 Identities = 575/621 (92%), Gaps = 16/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| || |||||||| |||||| |||||| ||||||| Sbjct: 569 tgcttcgggg-agttgaaaataagccgag-atccggag-attcccgaatagggcaacctt 625 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 626 tcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 684 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 744 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 745 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 804 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 || | || |||||| | ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 805 aatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagct 864 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 865 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 924 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagta-ccgtgagggaaaggt 419 ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 925 cttgcaaggctaaatactcctgggtgaccgatagccaaatagtacccgtgagggaaaggt 984 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||| ||||||| Sbjct: 985 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcag 1041 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1042 tgggaggagacag---gctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 1098 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 1099 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 1153 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 1154 gggcaattgtcactgcttatg 1174
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 817 bits (412), Expect = 0.0 Identities = 573/620 (92%), Gaps = 14/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| ||||| || |||||| |||||||||||||| Sbjct: 4304 tgcttcgggg-agttgaaaataagcatag-atccg-aggattcccgaataggtcaacctt 4360 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 4361 tcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatctt 4419 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4420 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaa 4479 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 4480 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcg 4539 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| | || || ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4540 aagcaatcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagct 4599 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4600 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 4659 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4660 cttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtg 4719 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 4720 aaaagaacccctgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 4776 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4777 gggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 4834 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| Sbjct: 4835 cagtggcttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcatag 4889 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 4890 ggctattgtcactgcttatg 4909
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 817 bits (412), Expect = 0.0 Identities = 575/621 (92%), Gaps = 15/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| || |||||||| |||||| ||| |||||||||| Sbjct: 142806 tgcttcgggg-agttgaaaataagcgcag-atccggag-attcccgaatgggtcaacctt 142750 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 142749 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 142691 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142690 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 142631 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 142630 cagcctaaaccgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcg 142571 Query: 241 aagcggttg-agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | || ||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 142570 aagcagctggagtgctgcaccctagatggtgagagtccagtagccgaaagcatcactagc 142511 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142510 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 142451 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 142450 ccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 142391 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 142390 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taggctcccaagcag 142334 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142333 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 142276 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 142275 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 142221 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 142220 gggcaattgtcactgcttatg 142200 Score = 817 bits (412), Expect = 0.0 Identities = 575/621 (92%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| || |||||||| |||||| ||| |||||||||| Sbjct: 110522 tgcttcgggg-agttgaaaataagcgcag-atccggag-attcccgaatgggtcaacctt 110578 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 110579 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 110637 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110638 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 110697 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 110698 cagcctaaaccgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcg 110757 Query: 241 aagcggttg-agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | || ||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 110758 aagcagctggagtgctgcaccctagatggtgagagtccagtagccgaaagcatcactagc 110817 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110818 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 110877 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110878 ccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 110937 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 110938 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taggctcccaagcag 110994 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110995 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 111052 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 111053 gcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcata 111107 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 111108 gggcaattgtcactgcttatg 111128
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 817 bits (412), Expect = 0.0 Identities = 573/620 (92%), Gaps = 14/620 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| ||||| || |||||| |||||||||||||| Sbjct: 23621 tgcttcgggg-agttgaaaataagcatag-atccg-aggattcccgaataggtcaacctt 23565 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 23564 tcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatctt 23506 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23505 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaa 23446 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 23445 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcg 23386 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| | || || ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 23385 aagcaatcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagct 23326 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23325 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 23266 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 23265 cttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtg 23206 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 23205 aaaagaacccctgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 23149 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23148 gggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 23091 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| Sbjct: 23090 cagtggcttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcatag 23036 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 23035 ggctattgtcactgcttatg 23016
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 817 bits (412), Expect = 0.0 Identities = 574/620 (92%), Gaps = 15/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| ||||| || |||||| |||||||||||||| Sbjct: 4573 tgcttcgggg-agttgaaaataagcatag-atccg-aggattcccgaataggtcaacctt 4629 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 4630 tcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatctt 4688 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4689 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 4748 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4749 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 4808 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || || || ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4809 aagcagtcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagct 4868 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4869 tatgctctgacccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccac 4928 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4929 cttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtg 4988 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||| | ||| ||||||||||||| |||||||| | ||||||||| |||| Sbjct: 4989 aaaagaacccctggcggggagtgaaatagaacatgaaaccg---taagctcccaa-cagt 5044 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5045 gggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 5102 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| Sbjct: 5103 cagtggcttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcatag 5157 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 5158 ggctattgtcactgcttatg 5177
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 817 bits (412), Expect = 0.0 Identities = 574/620 (92%), Gaps = 15/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| ||||| || |||||| |||||||||||||| Sbjct: 4573 tgcttcgggg-agttgaaaataagcatag-atccg-aggattcccgaataggtcaacctt 4629 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 4630 tcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatctt 4688 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4689 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 4748 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4749 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 4808 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| || || || ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4809 aagcagtcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagct 4868 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4869 tatgctctgacccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccac 4928 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4929 cttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtg 4988 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||| | ||| ||||||||||||| |||||||| | ||||||||| |||| Sbjct: 4989 aaaagaacccctggcggggagtgaaatagaacatgaaaccg---taagctcccaa-cagt 5044 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5045 gggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 5102 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| Sbjct: 5103 cagtggcttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcatag 5157 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 5158 ggctattgtcactgcttatg 5177
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 815 bits (411), Expect = 0.0 Identities = 456/472 (96%), Gaps = 13/472 (2%) Strand = Plus / Minus Query: 154 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 214 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 274 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 333 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 334 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 388 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 389 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 449 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 508 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 509 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 568 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 75067 Query: 569 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 75066 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 75015 Score = 258 bits (130), Expect = 2e-65 Identities = 154/158 (97%), Gaps = 3/158 (1%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 75639 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 75583 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75582 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 75523 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgta 158 |||||||||||||||||||||||||||||||||||||| Sbjct: 75522 agtagccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 85 gcaggcaagagacaacctggcgaactgaaacatcttagta 124 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 431 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 815 bits (411), Expect = 0.0 Identities = 456/472 (96%), Gaps = 13/472 (2%) Strand = Plus / Plus Query: 154 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 214 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 274 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 333 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 334 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 388 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 389 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 449 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 508 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 509 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 568 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 382471 Query: 569 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 382472 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 382523 Score = 258 bits (130), Expect = 2e-65 Identities = 154/158 (97%), Gaps = 3/158 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 381899 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 381955 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381956 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 382015 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgta 158 |||||||||||||||||||||||||||||||||||||| Sbjct: 382016 agtagccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 85 gcaggcaagagacaacctggcgaactgaaacatcttagta 124 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 85 gcaggcaagagacaacctggcgaactgaaacatcttagta 124 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 431 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 431 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 815 bits (411), Expect = 0.0 Identities = 456/472 (96%), Gaps = 13/472 (2%) Strand = Plus / Minus Query: 154 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 214 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 274 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 333 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 334 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 388 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 389 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 449 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 508 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 509 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 568 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 113158 Query: 569 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 113157 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 113106 Score = 258 bits (130), Expect = 2e-65 Identities = 154/158 (97%), Gaps = 3/158 (1%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 113730 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 113674 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113673 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 113614 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgta 158 |||||||||||||||||||||||||||||||||||||| Sbjct: 113613 agtagccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 85 gcaggcaagagacaacctggcgaactgaaacatcttagta 124 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 431 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 815 bits (411), Expect = 0.0 Identities = 456/472 (96%), Gaps = 13/472 (2%) Strand = Plus / Minus Query: 154 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 214 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 274 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 333 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 334 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 388 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 389 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 449 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 508 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 509 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 568 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 367840 Query: 569 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 367839 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 367788 Score = 815 bits (411), Expect = 0.0 Identities = 456/472 (96%), Gaps = 13/472 (2%) Strand = Plus / Minus Query: 154 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 214 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 274 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 333 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 334 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 388 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 389 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 449 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 508 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 509 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 568 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 184445 Query: 569 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 184444 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 184393 Score = 258 bits (130), Expect = 2e-65 Identities = 154/158 (97%), Gaps = 3/158 (1%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 368412 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 368356 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368355 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 368296 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgta 158 |||||||||||||||||||||||||||||||||||||| Sbjct: 368295 agtagccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 258 bits (130), Expect = 2e-65 Identities = 154/158 (97%), Gaps = 3/158 (1%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 185017 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 184961 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184960 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 184901 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgta 158 |||||||||||||||||||||||||||||||||||||| Sbjct: 184900 agtagccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 85 gcaggcaagagacaacctggcgaactgaaacatcttagta 124 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 431 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 805 bits (406), Expect = 0.0 Identities = 571/620 (92%), Gaps = 12/620 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || ||||||||||||||| |||||||| |||||| ||| ||| |||||| Sbjct: 74 tgcttcgggg-agctgaaaataagcatag-atccggag-attcccgaatgggttaacctt 130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 131 ttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatctt 189 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 249 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| Sbjct: 250 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggcg 309 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||| |||||||| |||||| | |||||||||||||||||||||||||||| Sbjct: 310 aagcggttgagtcccgcaccccagatggtgagagtccagtagccgaaagcatcactagct 369 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 tacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 429 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 489 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 490 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 546 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 547 gggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 606 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||| |||||||| || ||||||||||||||||||||||||||||||| | | Sbjct: 607 tagtggcctggttaag-----gggacccaccggagccgtagcgaaagcgagtcttcctgg 661 Query: 601 ggcgattgtcactgcttatg 620 ||| ||||||||| |||||| Sbjct: 662 ggcaattgtcactacttatg 681
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 803 bits (405), Expect = 0.0 Identities = 573/622 (92%), Gaps = 14/622 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||| ||||||| |||||||| |||||| ||||||| |||| | Sbjct: 86335 tgcttcgggg-agttgaaaatgagcatag-atccggag-attcccgaataggttaaccct 86391 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86392 tttaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 86450 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 86451 agtagccagaggaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggag 86510 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagc--aatacaagcgttgtgctgctagg 238 ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 86511 cagcctaaaccgtgaaaacggggttgtgggagagcccaatataagctctgtgctgctagg 86570 Query: 239 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 298 |||||||||||||| | ||||||||||||| | |||||||||||||||||||||| | | Sbjct: 86571 cgaagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattgg 86630 Query: 299 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 358 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86631 cttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 86690 Query: 359 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86691 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 86750 Query: 419 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 478 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 86751 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 86807 Query: 479 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 538 |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 86808 gtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgacttata 86867 Query: 539 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 598 |||||||||||||||||| ||||||||||||||||||||||| |||||||||| || Sbjct: 86868 ggcagtggcttggttaag-----ggaacccaccggagccgtagcgagagcgagtcttcat 86922 Query: 599 agggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 86923 ggggcaattgtcactgcttatg 86944
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 803 bits (405), Expect = 0.0 Identities = 573/622 (92%), Gaps = 14/622 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||| ||||||| |||||||| |||||| ||||||| |||||| Sbjct: 88421 tgcttcgggg-agttgaaaattagcatag-atccggag-attcccgaataggttaacctt 88477 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 88478 tttcactgc-tgctgaatccatgggcaggcaagagacaacctggtgaactgaaacatctt 88536 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88537 agtagccagaggaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 88596 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagca--atacaagcgttgtgctgctagg 238 |||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 88597 cagcctaaaccgtgaaaacggggttgtgggagagcacaatataagctctgtgctgctagg 88656 Query: 239 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 298 |||||||||||||| | ||||||||||||| | |||||||||||||||||||||| | | Sbjct: 88657 cgaagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattgg 88716 Query: 299 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 358 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88717 cttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 88776 Query: 359 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88777 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 88836 Query: 419 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 478 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 88837 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 88893 Query: 479 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 538 |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 88894 gtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgacttata 88953 Query: 539 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 598 |||||||||||||||||| ||||||||||||||||||||||| |||||||||| || Sbjct: 88954 ggcagtggcttggttaag-----ggaacccaccggagccgtagcgagagcgagtcttcat 89008 Query: 599 agggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 89009 ggggcaattgtcactgcttatg 89030
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 801 bits (404), Expect = 0.0 Identities = 571/620 (92%), Gaps = 15/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| || |||||||| |||||| |||||| ||||||| Sbjct: 81 tgcttcgggg-agttgaaaataagccgag-atccggag-attcccgaatagggcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 316 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 || | || |||||| | ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 317 aatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagct 376 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 436 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 437 cttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtg 496 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||| ||| |||||||| | ||||| |||||||| Sbjct: 497 aaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagt 553 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| || || |||||| ||||||||||||||| ||||||||||||||||||| | Sbjct: 554 gggaggagacag---gctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacg 610 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 611 cagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatag 665 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 666 ggcaattgtcactgcttatg 685
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 801 bits (404), Expect = 0.0 Identities = 424/428 (99%), Gaps = 2/428 (0%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 1 aaaataagcatag-atccggag-attcccaaataggtcaaccttttgaactgcctgctga 58 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 118 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 178 Query: 197 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 238 Query: 257 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 316 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 239 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 298 Query: 317 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 358 Query: 377 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 418 Query: 437 ggtagtga 444 |||||||| Sbjct: 419 ggtagtga 426
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 799 bits (403), Expect = 0.0 Identities = 576/622 (92%), Gaps = 20/622 (3%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 173 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 229 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 230 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 288 Query: 121 agt-agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 agtgagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 348 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 239 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 349 gcagcctaaaccgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggc 407 Query: 240 gaag-cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 298 |||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 408 gaagacgcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 467 Query: 299 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 358 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 468 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcgacaaggacc 527 Query: 359 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 418 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 528 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 587 Query: 419 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 478 ||||||||| ||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 588 tgaaaagaa-ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 643 Query: 479 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 538 |||||||| | | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 gtgggaggcca----gggctctgaccgcgtgcctgttgaagaatgagccggcgactcata 699 Query: 539 ggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaat 598 |||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 700 ggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcat 754 Query: 599 agggcgattgtcactgcttatg 620 ||||| |||||||||||||||| Sbjct: 755 agggcaattgtcactgcttatg 776
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 777 bits (392), Expect = 0.0 Identities = 570/621 (91%), Gaps = 15/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 52613 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 52557 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||| Sbjct: 52556 ttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatctt 52498 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 52497 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggag 52438 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||| |||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 52437 cagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcg 52378 Query: 241 aa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 || | | |||| ||| |||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 52377 aacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagc 52318 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 52317 ttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggacca 52258 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| Sbjct: 52257 ccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggt 52198 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| |||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 52197 gaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaagcag 52141 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52140 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 52083 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 |||| |||||||||||| |||||||||||||||| |||||||||||||| || ||| Sbjct: 52082 gcagcggcttggttaag-----ggaacccaccggagccatagcgaaagcgagtattcata 52028 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 52027 gggcaattgtcactgcttatg 52007 Score = 777 bits (392), Expect = 0.0 Identities = 570/621 (91%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 37215 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 37271 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||| Sbjct: 37272 ttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatctt 37330 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 37331 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggag 37390 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||| |||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 37391 cagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcg 37450 Query: 241 aa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 || | | |||| ||| |||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 37451 aacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagc 37510 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 37511 ttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggacca 37570 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| Sbjct: 37571 ccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggt 37630 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| |||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 37631 gaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaagcag 37687 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37688 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 37745 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 |||| |||||||||||| |||||||||||||||| |||||||||||||| || ||| Sbjct: 37746 gcagcggcttggttaag-----ggaacccaccggagccatagcgaaagcgagtattcata 37800 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 37801 gggcaattgtcactgcttatg 37821
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 777 bits (392), Expect = 0.0 Identities = 574/624 (91%), Gaps = 17/624 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaa-ataggtcaacct 59 |||||||||| |||||||||||||| ||| |||||| | |||||| | |||||||||||| Sbjct: 131798 tgcttcgggg-agttgaaaataagcgtag-atccgg-ggattcccgatataggtcaacct 131742 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || |||||| ||||||||||| | |||||||||||||||||||| |||||||||||||| Sbjct: 131741 ttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatct 131683 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131682 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 131623 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 239 |||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 131622 gcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggc 131563 Query: 240 gaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta 297 ||||| | ||| ||| |||||||||||||| | ||||||||||||||||||||||||| Sbjct: 131562 gaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatcacta 131503 Query: 298 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 357 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131502 gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 131443 Query: 358 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 417 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 131442 caccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagg 131383 Query: 418 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 477 |||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||| Sbjct: 131382 gtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagc 131326 Query: 478 agtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 536 ||||||||| || | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 131325 agtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactca 131267 Query: 537 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 596 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 131266 taggcagtggcttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttc 131212 Query: 597 atagggcgattgtcactgcttatg 620 | ||||| |||||||||||||||| Sbjct: 131211 acagggcaattgtcactgcttatg 131188 Score = 777 bits (392), Expect = 0.0 Identities = 574/624 (91%), Gaps = 17/624 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaa-ataggtcaacct 59 |||||||||| |||||||||||||| ||| |||||| | |||||| | |||||||||||| Sbjct: 103596 tgcttcgggg-agttgaaaataagcgtag-atccgg-ggattcccgatataggtcaacct 103652 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || |||||| ||||||||||| | |||||||||||||||||||| |||||||||||||| Sbjct: 103653 ttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatct 103711 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103712 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 103771 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 239 |||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 103772 gcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggc 103831 Query: 240 gaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta 297 ||||| | ||| ||| |||||||||||||| | ||||||||||||||||||||||||| Sbjct: 103832 gaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatcacta 103891 Query: 298 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 357 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103892 gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 103951 Query: 358 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 417 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 103952 caccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagg 104011 Query: 418 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 477 |||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||| Sbjct: 104012 gtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagc 104068 Query: 478 agtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 536 ||||||||| || | || |||||||||||||||||||||||||||||||||||||||| Sbjct: 104069 agtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactca 104127 Query: 537 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 596 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 104128 taggcagtggcttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttc 104182 Query: 597 atagggcgattgtcactgcttatg 620 | ||||| |||||||||||||||| Sbjct: 104183 acagggcaattgtcactgcttatg 104206
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 777 bits (392), Expect = 0.0 Identities = 570/621 (91%), Gaps = 15/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||| ||||||| Sbjct: 4143 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaatagggcaacctt 4199 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||| Sbjct: 4200 ttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatctt 4258 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4259 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggag 4318 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||| |||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 4319 cagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcg 4378 Query: 241 aa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 || | | |||| ||| |||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 4379 aacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagc 4438 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4439 ttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggacca 4498 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| Sbjct: 4499 ccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggt 4558 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| |||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 4559 gaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaagcag 4615 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4616 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 4673 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 |||| |||||||||||| |||||||||||||||| |||||||||||||| || ||| Sbjct: 4674 gcagcggcttggttaag-----ggaacccaccggagccatagcgaaagcgagtattcata 4728 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 4729 gggcaattgtcactgcttatg 4749
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 755 bits (381), Expect = 0.0 Identities = 462/486 (95%), Gaps = 6/486 (1%) Strand = Plus / Plus Query: 70 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 129 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 130 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 190 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 248 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 249 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 308 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 309 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 369 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 428 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 429 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 488 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 489 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 548 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 491 Query: 549 tggtta 554 |||||| Sbjct: 492 tggtta 497
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 755 bits (381), Expect = 0.0 Identities = 566/622 (90%), Gaps = 18/622 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || |||||| |||||||| |||||||| |||||| ||||||| |||||| Sbjct: 128373 tgcttcgggg-agctgaaaacaagcatag-atccggag-attcccgaataggttaacctt 128317 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 128316 ttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatctt 128258 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 128257 agtagccagaggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggag 128198 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgc 234 ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| Sbjct: 128197 tagcctaaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgc 128138 Query: 235 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 294 |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||| Sbjct: 128137 taggcgaagcggttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatca 128078 Query: 295 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 354 |||||| | ||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 128077 ctagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaag 128018 Query: 355 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 414 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 128017 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgaggga 127958 Query: 415 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 474 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 127957 agggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagctccca 127901 Query: 475 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 534 |||||||||||| ||| ||||||||||||| |||||||||| |||||||||||||||| Sbjct: 127900 agcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgact 127841 Query: 535 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 594 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 127840 cataggcagtggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 127786 Query: 595 taatagggcgattgtcactgct 616 | |||||| |||||||||||| Sbjct: 127785 tcctagggcaattgtcactgct 127764 Score = 755 bits (381), Expect = 0.0 Identities = 566/622 (90%), Gaps = 18/622 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || |||||| |||||||| |||||||| |||||| ||||||| |||||| Sbjct: 95074 tgcttcgggg-agctgaaaacaagcatag-atccggag-attcccgaataggttaacctt 95130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 95131 ttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatctt 95189 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 95190 agtagccagaggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggag 95249 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgc 234 ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| Sbjct: 95250 tagcctaaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgc 95309 Query: 235 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 294 |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||| Sbjct: 95310 taggcgaagcggttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatca 95369 Query: 295 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 354 |||||| | ||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95370 ctagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaag 95429 Query: 355 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 414 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95430 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgaggga 95489 Query: 415 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 474 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 95490 agggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagctccca 95546 Query: 475 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 534 |||||||||||| ||| ||||||||||||| |||||||||| |||||||||||||||| Sbjct: 95547 agcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgact 95606 Query: 535 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 594 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95607 cataggcagtggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 95661 Query: 595 taatagggcgattgtcactgct 616 | |||||| |||||||||||| Sbjct: 95662 tcctagggcaattgtcactgct 95683
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 753 bits (380), Expect = 0.0 Identities = 483/513 (94%), Gaps = 7/513 (1%) Strand = Plus / Minus Query: 40 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 99 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 507 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 449 Query: 100 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 389 Query: 160 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 329 Query: 220 caagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcca 278 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 328 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 269 Query: 279 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 209 Query: 339 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 398 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 208 cgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgatagcgaa 149 Query: 399 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 458 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 148 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 89 Query: 459 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 518 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 88 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 34 Query: 519 gaatgagccggcgactcataggcagtggcttgg 551 ||||||||||||||||||||||||||||||||| Sbjct: 33 gaatgagccggcgactcataggcagtggcttgg 1
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 743 bits (375), Expect = 0.0 Identities = 478/509 (93%), Gaps = 10/509 (1%) Strand = Plus / Minus Query: 113 aacatcttagtagccagaggaaaagaaag-caaaagcgattcccgtagtagcggcgagcg 171 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 564 aacatcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcg 505 Query: 172 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgc 231 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 504 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgc 445 Query: 232 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 291 |||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||| Sbjct: 444 tgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagca 385 Query: 292 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 351 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 325 Query: 352 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 265 Query: 412 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 471 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 264 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 208 Query: 472 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 531 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 207 ccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcg 149 Query: 532 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 591 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 148 actcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgag 94 Query: 592 tcttaatagggcgattgtcactgcttatg 620 |||| ||||||| |||||||||||||||| Sbjct: 93 tcttcatagggcaattgtcactgcttatg 65
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 741 bits (374), Expect = 0.0 Identities = 564/620 (90%), Gaps = 13/620 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || |||||||||| |||| |||||||| |||||| ||||||| |||||| Sbjct: 116136 tgcttcgggg-agctgaaaataagtatag-atccggag-attcccgaataggttaacctt 116080 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||| Sbjct: 116079 tgaaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatctt 116021 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 116020 agtagccagaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaa 115961 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||| ||||||| |||| | | ||| |||||| ||||||||| Sbjct: 115960 cagcctaaaccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcg 115902 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| ||||||| | ||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 115901 aagcagttgagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagct 115842 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115841 taggctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 115782 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115781 cttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 115722 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| ||||||||| |||||||||||||| Sbjct: 115721 aaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagt 115665 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 115664 gggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 115605 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||| ||||||||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 115604 cagtggcctggttaagggagc-----ccaccggagccgtagcgaaagcgagtcttcttag 115550 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 115549 ggcaattgtcactgcttatg 115530 Score = 741 bits (374), Expect = 0.0 Identities = 564/620 (90%), Gaps = 13/620 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || |||||||||| |||| |||||||| |||||| ||||||| |||||| Sbjct: 85984 tgcttcgggg-agctgaaaataagtatag-atccggag-attcccgaataggttaacctt 86040 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||| Sbjct: 86041 tgaaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatctt 86099 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 86100 agtagccagaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaa 86159 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||| ||||||| |||| | | ||| |||||| ||||||||| Sbjct: 86160 cagcctaaaccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcg 86218 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| ||||||| | ||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 86219 aagcagttgagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagct 86278 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86279 taggctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 86338 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86339 cttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 86398 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| ||||||||| |||||||||||||| Sbjct: 86399 aaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagt 86455 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 86456 gggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 86515 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||| ||||||||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 86516 cagtggcctggttaagggagc-----ccaccggagccgtagcgaaagcgagtcttcttag 86570 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 86571 ggcaattgtcactgcttatg 86590
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 737 bits (372), Expect = 0.0 Identities = 462/486 (95%), Gaps = 7/486 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 46325 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 46381 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 46382 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 46440 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46441 actagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaa 46500 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 46501 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 46560 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 46561 aagcggtggagtaccgcaccctagatggctagagtccagtagccgaaagcatcactagct 46620 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46621 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 46680 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 46681 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 46740 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | ||||| |||||||| Sbjct: 46741 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagt 46797 Query: 481 gggagg 486 |||||| Sbjct: 46798 gggagg 46803 Score = 190 bits (96), Expect = 4e-45 Identities = 117/124 (94%), Gaps = 5/124 (4%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 557 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 616 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 617 tatg 620 |||| Sbjct: 46933 tatg 46936
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 737 bits (372), Expect = 0.0 Identities = 462/486 (95%), Gaps = 7/486 (1%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 130462 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 130406 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 130405 tcgaactac-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 130347 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130346 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 130287 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 130286 cagcctaaaccgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcg 130227 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 130226 aagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagct 130167 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130166 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 130107 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 130106 cttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtg 130047 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 130046 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 129990 Query: 481 gggagg 486 |||||| Sbjct: 129989 gggagg 129984 Score = 737 bits (372), Expect = 0.0 Identities = 462/486 (95%), Gaps = 7/486 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 101994 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccgaataggtcaacctt 102050 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 102051 tcgaactac-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 102109 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102110 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 102169 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 102170 cagcctaaaccgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcg 102229 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 102230 aagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagct 102289 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102290 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 102349 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 102350 cttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtg 102409 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 102410 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 102466 Query: 481 gggagg 486 |||||| Sbjct: 102467 gggagg 102472 Score = 174 bits (88), Expect = 2e-40 Identities = 115/124 (92%), Gaps = 5/124 (4%) Strand = Plus / Minus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 557 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 616 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 617 tatg 620 |||| Sbjct: 129854 tatg 129851 Score = 174 bits (88), Expect = 2e-40 Identities = 115/124 (92%), Gaps = 5/124 (4%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 557 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 616 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 617 tatg 620 |||| Sbjct: 102602 tatg 102605
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 735 bits (371), Expect = 0.0 Identities = 562/620 (90%), Gaps = 12/620 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || ||||||||||||| | |||||||| |||||| ||||||| |||||| Sbjct: 74 tgcttcgggg-agctgaaaataagcat-ggatccggag-attcccgaataggttaacctt 130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||| Sbjct: 131 ttgaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatctt 189 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 190 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggag 249 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 ||||||||||||||||||||||||||||| |||||| | |||||||| |||||||| Sbjct: 250 tagcctaaaccgtgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggcg 309 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| ||||| | | ||||| ||||||| | |||||||||||||||||||||||||| | Sbjct: 310 aagcagttgaatcctgcaccatagatggtgagagtccagtagccgaaagcatcactagtt 369 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 tatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 429 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 cttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 489 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 490 aaaagaacccccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 546 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 547 gggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 606 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 |||||| |||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 607 tagtggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctag 661 Query: 601 ggcgattgtcactgcttatg 620 ||| ||||||||| |||||| Sbjct: 662 ggcaattgtcactacttatg 681
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 728 bits (367), Expect = 0.0 Identities = 563/621 (90%), Gaps = 13/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || ||||||||||||||| |||||||| |||||| ||||||| |||||| Sbjct: 2117 tgcttcgggg-agctgaaaataagcatag-atccggag-attcccgaataggttaacctt 2173 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 2174 ttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatctt 2232 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2233 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggac 2292 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||||| Sbjct: 2293 tagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcg 2352 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gc 299 |||| ||||||| | ||||||||||||| | |||||||||||||||||||| || | | Sbjct: 2353 aagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataacaacac 2412 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2413 tcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 2472 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2473 ccttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggt 2532 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 2533 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 2589 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2590 tgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatag 2649 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 | |||||| |||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 2650 gtagtggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttccta 2704 Query: 600 gggcgattgtcactgcttatg 620 |||| ||||||||| |||||| Sbjct: 2705 gggcaattgtcactacttatg 2725
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 728 bits (367), Expect = 0.0 Identities = 563/621 (90%), Gaps = 13/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || ||||||||||||||| |||||||| |||||| ||||||| |||||| Sbjct: 118076 tgcttcgggg-agctgaaaataagcatag-atccggag-attcccgaataggttaacctt 118020 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 118019 ttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatctt 117961 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 117960 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggac 117901 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||||| Sbjct: 117900 tagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcg 117841 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gc 299 |||| ||||||| | ||||||||||||| | |||||||||||||||||||| || | | Sbjct: 117840 aagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataacaacac 117781 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117780 tcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 117721 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 117720 ccttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggt 117661 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 117660 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 117604 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 117603 tgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatag 117544 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 | |||||| |||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 117543 gtagtggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttccta 117489 Query: 600 gggcgattgtcactgcttatg 620 |||| ||||||||| |||||| Sbjct: 117488 gggcaattgtcactacttatg 117468 Score = 728 bits (367), Expect = 0.0 Identities = 563/621 (90%), Gaps = 13/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || ||||||||||||||| |||||||| |||||| ||||||| |||||| Sbjct: 90026 tgcttcgggg-agctgaaaataagcatag-atccggag-attcccgaataggttaacctt 90082 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 90083 ttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatctt 90141 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 90142 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggac 90201 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||||| Sbjct: 90202 tagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcg 90261 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gc 299 |||| ||||||| | ||||||||||||| | |||||||||||||||||||| || | | Sbjct: 90262 aagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataacaacac 90321 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90322 tcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 90381 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 90382 ccttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggt 90441 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 90442 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 90498 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 90499 tgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatag 90558 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 | |||||| |||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 90559 gtagtggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttccta 90613 Query: 600 gggcgattgtcactgcttatg 620 |||| ||||||||| |||||| Sbjct: 90614 gggcaattgtcactacttatg 90634
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 722 bits (364), Expect = 0.0 Identities = 562/621 (90%), Gaps = 13/621 (2%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || ||||||| ||||| | |||||||| |||||| ||||||| |||||| Sbjct: 146486 tgcttcgggg-agctgaaaatgagcat-ggatccggag-attcccgaataggttaacctt 146430 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||| Sbjct: 146429 ttgaactac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatctt 146371 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146370 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 146311 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 146310 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcg 146251 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc- 299 |||| ||||||| | | ||||||||||| | |||||||||||||||||||||||| || Sbjct: 146250 aagcagttgagtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggct 146191 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 146190 ttatgctccaacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggacca 146131 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 146130 ccttgtaaggctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggt 146071 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 146070 gaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcag 146014 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 146013 tgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgacttatag 145954 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 |||||||| |||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 145953 gcagtggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttccta 145899 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 145898 gggcaattgtcactgcttatg 145878 Score = 722 bits (364), Expect = 0.0 Identities = 562/621 (90%), Gaps = 13/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || ||||||| ||||| | |||||||| |||||| ||||||| |||||| Sbjct: 111976 tgcttcgggg-agctgaaaatgagcat-ggatccggag-attcccgaataggttaacctt 112032 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||| Sbjct: 112033 ttgaactac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatctt 112091 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112092 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 112151 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 112152 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcg 112211 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc- 299 |||| ||||||| | | ||||||||||| | |||||||||||||||||||||||| || Sbjct: 112212 aagcagttgagtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggct 112271 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112272 ttatgctccaacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggacca 112331 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112332 ccttgtaaggctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggt 112391 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 112392 gaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcag 112448 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 112449 tgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgacttatag 112508 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 |||||||| |||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 112509 gcagtggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttccta 112563 Query: 600 gggcgattgtcactgcttatg 620 |||| |||||||||||||||| Sbjct: 112564 gggcaattgtcactgcttatg 112584
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 722 bits (364), Expect = 0.0 Identities = 460/486 (94%), Gaps = 7/486 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 81 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 316 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| |||||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 317 aagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagct 376 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 436 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 437 cttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtg 496 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||| ||| |||||||| | |||||||||||||| Sbjct: 497 aaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagt 553 Query: 481 gggagg 486 |||||| Sbjct: 554 gggagg 559 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%), Gaps = 5/90 (5%) Strand = Plus / Plus Query: 531 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 590 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 591 gtcttaatagggcgattgtcactgcttatg 620 ||||| ||||||| |||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatg 676
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 722 bits (364), Expect = 0.0 Identities = 460/486 (94%), Gaps = 7/486 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 81 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 316 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| |||||| |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 317 aagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagct 376 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 436 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 437 cttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtg 496 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| || ||||||||||||| |||||||| | |||||||||||||| Sbjct: 497 aaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagt 553 Query: 481 gggagg 486 |||||| Sbjct: 554 gggagg 559 Score = 159 bits (80), Expect = 1e-35 Identities = 113/124 (91%), Gaps = 5/124 (4%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 557 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 616 |||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 -----ggaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 617 tatg 620 |||| Sbjct: 696 tatg 699
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 720 bits (363), Expect = 0.0 Identities = 561/620 (90%), Gaps = 9/620 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || |||||||||| |||| |||||||| |||||| ||||||| |||||| Sbjct: 57 tgcttcgggg-agctgaaaataagtatag-atccggag-attcccgaataggttaacctt 113 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 ||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 114 ttaaactgc-tgctgaatccataggcgggcaagagacaacctggcgaactgaaacatctt 172 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||| |||||| |||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 173 agtagccggaggaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggag 232 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||| |||| | | |||| |||| ||||||||| Sbjct: 233 cagcctaaaccgtgaaaacggggttgtgggggagctaaagaagcattgtattgctaggcg 292 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| ||||||| | ||||||||||||| | ||||||||| |||||||||| || |||| Sbjct: 293 aagcagttgagtcctgcaccctagatggtgagagtccagtaaccgaaagcattacaagct 352 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 | ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 353 tgggctctaacccgagtaacatggggcacgtggaatcccgtgtgaatcagcaaggaccac 412 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 472 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||| ||||||||| Sbjct: 473 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagt 529 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 530 gggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 589 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||| |||||||||||| | | ||||||||||| ||||||||||||||||| || Sbjct: 590 cagtggcctggttaagggaaag--aaccaccggagccatagcgaaagcgagtcttcccag 647 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 648 ggcaattgtcactgcttatg 667
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 718 bits (362), Expect = 0.0 Identities = 560/620 (90%), Gaps = 12/620 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || |||||| |||||||| |||||||| |||||| ||||||| |||||| Sbjct: 3963 tgcttcgggg-agctgaaaagaagcatag-atccggag-attcccgaataggttaacctt 4019 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| || || | |||||||||||| ||||||||||||||||||| Sbjct: 4020 ttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatctt 4078 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4079 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 4138 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 4139 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtg 4198 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| || Sbjct: 4199 aagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtct 4258 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4259 tacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 4318 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4319 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 4378 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| ||||| || | |||| ||||||||| Sbjct: 4379 aaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagt 4435 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 | |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 4436 gagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 4495 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||| |||||||| |||| |||||||||||||||||||||||||||| ||| Sbjct: 4496 cagtggcctggttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctag 4550 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 4551 ggcaattgtcactgcttatg 4570
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 718 bits (362), Expect = 0.0 Identities = 563/624 (90%), Gaps = 16/624 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || |||||||||| || | |||||||| |||||| ||||||| |||||| Sbjct: 74 tgcttcgggg-agctgaaaataagtat-ggatccggag-attcccgaataggttaacctt 130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 ||||||||| |||||||| ||| || |||||||||||||| |||||||||||||||||| Sbjct: 131 ttaaactgc-tgctgaattcataggcgggcaagagacaacccggcgaactgaaacatctt 189 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 190 agtagccggaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggag 249 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaa----gcgttgtgctgcta 236 | |||||||||||||||||||||||||||| |||| |||||| || ||| ||||||| Sbjct: 250 cggcctaaaccgtgaaaacggggttgtgggggagctatacaaataagcattgcgctgcta 309 Query: 237 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 296 |||||||| ||||||| | |||||| |||||| | ||||||||| |||||||||| || Sbjct: 310 ggcgaagcagttgagtcctgcaccccagatggtgagagtccagtaaccgaaagcataaca 369 Query: 297 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 356 | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 atcttatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 429 Query: 357 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 489 Query: 417 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 476 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 490 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 546 Query: 477 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 536 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 547 cagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 606 Query: 537 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 596 ||||||||||| |||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 607 taggcagtggcctggttaag-----ggaacccaccggagccgtagcgaaagcaagtcttc 661 Query: 597 atagggcgattgtcactgcttatg 620 | |||| |||||||||||||||| Sbjct: 662 ctggggcaattgtcactgcttatg 685
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 718 bits (362), Expect = 0.0 Identities = 560/620 (90%), Gaps = 12/620 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || |||||| |||||||| |||||||| |||||| ||||||| |||||| Sbjct: 73 tgcttcgggg-agctgaaaagaagcatag-atccggag-attcccgaataggttaacctt 129 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| || || | |||||||||||| ||||||||||||||||||| Sbjct: 130 ttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatctt 188 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 248 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 249 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtg 308 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| || Sbjct: 309 aagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtct 368 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 tacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 428 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 488 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| ||||| || | |||| ||||||||| Sbjct: 489 aaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagt 545 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 | |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 546 gagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 605 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||| |||||||| |||| |||||||||||||||||||||||||||| ||| Sbjct: 606 cagtggcctggttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctag 660 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 661 ggcaattgtcactgcttatg 680
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 718 bits (362), Expect = 0.0 Identities = 560/620 (90%), Gaps = 12/620 (1%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || |||||| |||||||| |||||||| |||||| ||||||| |||||| Sbjct: 151172 tgcttcgggg-agctgaaaagaagcatag-atccggag-attcccgaataggttaacctt 151116 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| || || | |||||||||||| ||||||||||||||||||| Sbjct: 151115 ttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatctt 151057 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151056 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 150997 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 150996 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtg 150937 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| || Sbjct: 150936 aagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtct 150877 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150876 tacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 150817 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150816 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 150757 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| ||||| || | |||| ||||||||| Sbjct: 150756 aaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagt 150700 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 | |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 150699 gagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 150640 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||| |||||||| |||| |||||||||||||||||||||||||||| ||| Sbjct: 150639 cagtggcctggttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctag 150585 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 150584 ggcaattgtcactgcttatg 150565 Score = 718 bits (362), Expect = 0.0 Identities = 560/620 (90%), Gaps = 12/620 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || |||||| |||||||| |||||||| |||||| ||||||| |||||| Sbjct: 117494 tgcttcgggg-agctgaaaagaagcatag-atccggag-attcccgaataggttaacctt 117550 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| || || | |||||||||||| ||||||||||||||||||| Sbjct: 117551 ttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatctt 117609 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117610 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 117669 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 117670 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtg 117729 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| || Sbjct: 117730 aagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtct 117789 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117790 tacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 117849 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117850 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 117909 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| ||||| || | |||| ||||||||| Sbjct: 117910 aaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagt 117966 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 | |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 117967 gagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 118026 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||| |||||||| |||| |||||||||||||||||||||||||||| ||| Sbjct: 118027 cagtggcctggttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctag 118081 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 118082 ggcaattgtcactgcttatg 118101
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 718 bits (362), Expect = 0.0 Identities = 560/620 (90%), Gaps = 12/620 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| || |||||| |||||||| |||||||| |||||| ||||||| |||||| Sbjct: 73 tgcttcgggg-agctgaaaagaagcatag-atccggag-attcccgaataggttaacctt 129 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| || || | |||||||||||| ||||||||||||||||||| Sbjct: 130 ttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatctt 188 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 248 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 249 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtg 308 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| || Sbjct: 309 aagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtct 368 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 tacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 428 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 488 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| ||||| || | |||| ||||||||| Sbjct: 489 aaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagt 545 Query: 481 gggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 | |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 546 gagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 605 Query: 541 cagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatag 600 ||||||| |||||||| |||| |||||||||||||||||||||||||||| ||| Sbjct: 606 cagtggcctggttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctag 660 Query: 601 ggcgattgtcactgcttatg 620 ||| |||||||||||||||| Sbjct: 661 ggcaattgtcactgcttatg 680
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 716 bits (361), Expect = 0.0 Identities = 459/486 (94%), Gaps = 7/486 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| ||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 81 tgcttcggggg-gttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 316 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| |||||| |||||||||||||| | ||||||||||||||||||||| |||||| Sbjct: 317 aagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagct 376 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 436 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 437 cttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtg 496 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||| Sbjct: 497 aaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagt 553 Query: 481 gggagg 486 |||||| Sbjct: 554 gggagg 559 Score = 137 bits (69), Expect = 5e-29 Identities = 113/125 (90%), Gaps = 7/125 (5%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 557 ggaacggaacccaccgg-agccgtagcgaaagcgagtcttaatagggcgattgtcactgc 615 |||||||||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 -----ggaacccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 616 ttatg 620 ||||| Sbjct: 695 ttatg 699
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 714 bits (360), Expect = 0.0 Identities = 459/486 (94%), Gaps = 7/486 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 81 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 316 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| |||||| |||||||||||||| | ||||||||||||||||||||| |||||| Sbjct: 317 aagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagct 376 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 436 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 437 cttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtg 496 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| || ||||||||||||| |||||||| | |||||||||||||| Sbjct: 497 aaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagt 553 Query: 481 gggagg 486 |||||| Sbjct: 554 gggagg 559 Score = 125 bits (63), Expect = 2e-25 Identities = 110/124 (88%), Gaps = 5/124 (4%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 557 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 616 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 617 tatg 620 |||| Sbjct: 696 tatg 699
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 714 bits (360), Expect = 0.0 Identities = 459/486 (94%), Gaps = 7/486 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 81 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 316 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| |||||| |||||||||||||| | ||||||||||||||||||||| |||||| Sbjct: 317 aagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagct 376 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 436 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 437 cttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtg 496 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||||||||| ||| ||||||||| ||| |||||||| | |||||||||||||| Sbjct: 497 aaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagt 553 Query: 481 gggagg 486 |||||| Sbjct: 554 gggagg 559 Score = 127 bits (64), Expect = 5e-26 Identities = 110/124 (88%), Gaps = 6/124 (4%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 557 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 616 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 617 tatg 620 |||| Sbjct: 695 tatg 698
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 700 bits (353), Expect = 0.0 Identities = 488/525 (92%), Gaps = 10/525 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 122 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 178 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 179 tcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatctt 237 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 agtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 297 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 298 cagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcg 357 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| ||||||| |||||||||||| | |||||||||||||||||||||||||||| Sbjct: 358 aagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagct 417 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 477 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 478 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 537 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 |||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 538 aaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagn 594 Query: 481 gggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatga 524 |||||| | || | |||||||||||||||||||||||||||| Sbjct: 595 gggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatga 637
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 688 bits (347), Expect = 0.0 Identities = 360/363 (99%), Gaps = 1/363 (0%) Strand = Plus / Plus Query: 31 atccggagnattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 90 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5 atccggag-attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 63 Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 123 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 183 Query: 211 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 243 Query: 271 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 330 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 244 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 303 Query: 331 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 363 Query: 391 ata 393 ||| Sbjct: 364 ata 366
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 684 bits (345), Expect = 0.0 Identities = 351/353 (99%) Strand = Plus / Plus Query: 268 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 327 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 328 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 388 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 448 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 508 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 300 Query: 568 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 |||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 301 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 353
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 662 bits (334), Expect = 0.0 Identities = 458/492 (93%), Gaps = 8/492 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| || |||||||| |||||| |||||| ||||||| Sbjct: 81 tgcttcgggg-agttgaaaataagccgag-atccggag-attcccgaatagggcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 316 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 || | || |||||| | ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 317 aatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagct 376 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 436 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 437 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 496 Query: 421 aaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagt 480 ||||||| ||||| ||| ||||||||| ||| |||||||| | ||||| |||||||| Sbjct: 497 aaaagaa-ccccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagt 552 Query: 481 gggaggggaaag 492 |||||| ||||| Sbjct: 553 gggaggagaaag 564 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 562 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatg 660
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 650 bits (328), Expect = 0.0 Identities = 555/621 (89%), Gaps = 16/621 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| ||||| || |||||| ||| || |||||| Sbjct: 73 tgcttcgggg-agttgaaaataagcatag-atccgtag-attcccgaatggggtaacctt 129 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | | ||||| |||| |||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 130 tcacactgc-tgctcaatccatgggcaggaaagagacaacctggcgaactgaaacatctt 188 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 189 agtagccagaggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggat 248 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 249 cagcctaaaccgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcg 308 Query: 241 aagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | || | || |||||||||||||| |||||||||||| | |||||||||||| Sbjct: 309 aagcagcttaaatgatgcaccctagatggcgaaagtccagtagtcaaaagcatcactacg 368 Query: 300 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 359 || |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 369 ttgcgctctgacccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaaggacca 428 Query: 360 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 419 |||||||||||||||||||||||||| ||| |||| ||||||||||||||||||| ||| Sbjct: 429 ccttgcaaggctaaatactcctgggtaaccaatagtaaagtagtaccgtgagggaagggt 488 Query: 420 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 479 |||||||| ||||| |||| ||||||||||||| |||||||| | |||| |||||||| Sbjct: 489 gaaaagaa-ccccattggggagtgaaatagaacatgaaaccg---taagctaccaagcag 544 Query: 480 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 539 ||||||| | || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 602 Query: 540 gcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaata 599 |||| |||||||||||| |||||||||||||||| |||||||||||||| || ||| Sbjct: 603 gcagcggcttggttaag-----ggaacccaccggagccatagcgaaagcgagtattcata 657 Query: 600 gggcgattgtcactgcttatg 620 || | |||||||||||||||| Sbjct: 658 ggactattgtcactgcttatg 678
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 636 bits (321), Expect = e-179 Identities = 410/432 (94%), Gaps = 7/432 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 70 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 126 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 127 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 185 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 245 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 246 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 305 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 ||||||| || | | |||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 306 aagcggtggaatactgcaccctagatggcgatagtccagtagccgaaagcatcactagct 365 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 425 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 |||||||||||||||||| | |||||||||||| |||||||||||||||||||| |||| Sbjct: 426 cttgcaaggctaaatactac--ggtgaccgatagtgaagtagtaccgtgagggaagggtg 483 Query: 421 aaaagaaccccc 432 ||||||||||| Sbjct: 484 -aaagaaccccc 494 Score = 95.6 bits (48), Expect = 2e-16 Identities = 77/85 (90%), Gaps = 5/85 (5%) Strand = Plus / Plus Query: 537 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 595 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 596 aatagggcgattgtcactgcttatg 620 ||||||| |||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatg 693
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 630 bits (318), Expect = e-177 Identities = 400/422 (94%), Gaps = 4/422 (0%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 50 tgcttcgggg-agttgaaaataagcgtag-atccggag-attcccgaataggtcaacctt 106 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107 tcaaactgc-tgccgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 165 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 225 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 226 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcg 285 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||| || ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 286 aagcggccgaacaccgcaccctagatggtgggagtccagtagccgaaagcatcactagct 345 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 tacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccac 405 Query: 361 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 406 cttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtg 465 Query: 421 aa 422 || Sbjct: 466 aa 467
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 589 bits (297), Expect = e-165 Identities = 330/337 (97%), Gaps = 3/337 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||| ||||||||| |||||||| ||||||||||||||||||||| Sbjct: 123397 tgcttcgggg-agttgaaattaagcatag-atccggag-attcccaaataggtcaacctt 123341 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123340 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 123281 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123280 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 123221 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123220 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 123161 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123160 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 123101 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatc 337 || |||||| ||||||||||||||||||||||||||| Sbjct: 123100 tacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 545 bits (275), Expect = e-152 Identities = 290/294 (98%), Gaps = 2/294 (0%) Strand = Plus / Minus Query: 329 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 389 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 449 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 509 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 566 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 567 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 122527
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 589 bits (297), Expect = e-165 Identities = 330/337 (97%), Gaps = 3/337 (0%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||| ||||||||| |||||||| ||||||||||||||||||||| Sbjct: 12825938 tgcttcgggg-agttgaaattaagcatag-atccggag-attcccaaataggtcaacctt 12825882 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825881 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 12825822 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825821 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 12825762 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825761 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 12825702 Query: 241 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825701 aagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagct 12825642 Query: 301 tatgctctgacccgagtagcatggggcacgtggaatc 337 || |||||| ||||||||||||||||||||||||||| Sbjct: 12825641 tacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 545 bits (275), Expect = e-152 Identities = 290/294 (98%), Gaps = 2/294 (0%) Strand = Plus / Minus Query: 329 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 389 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 449 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 509 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 566 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 567 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 12825068 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 274 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 333 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 585 bits (295), Expect = e-164 Identities = 301/303 (99%) Strand = Plus / Plus Query: 318 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 378 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 438 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 497 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 498 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 558 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 617 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 300 Query: 618 atg 620 ||| Sbjct: 301 atg 303
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 55 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 114 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 115 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 175 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 234 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 235 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 294 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 295 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 354 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 355 gaccaccttgcaaggctaaatactcctgggtg 386 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 561 bits (283), Expect = e-156 Identities = 286/287 (99%) Strand = Plus / Plus Query: 334 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 394 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 454 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 514 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 240 Query: 574 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 287
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 494 bits (249), Expect = e-136 Identities = 380/423 (89%), Gaps = 8/423 (1%) Strand = Plus / Minus Query: 195 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 254 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 255 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 314 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 315 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 375 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 434 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 435 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 494 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 495 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 554 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 555 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 614 || || |||||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 ag-----ggcacccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 615 ctt 617 ||| Sbjct: 5872 ctt 5870 Score = 212 bits (107), Expect = 1e-51 Identities = 151/163 (92%), Gaps = 2/163 (1%) Strand = Plus / Minus Query: 31 atccggagnattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 90 |||||||| |||||| ||||||| |||||||| |||||| ||||||||||||| ||||| Sbjct: 6475 atccggag-attcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggt 6418 Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||| | |||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 6417 aaggggcaacctggtgaactgaaacatcttagtaaccagaggaagagaaagcaaaagcga 6358 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 193 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6357 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 6315
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 480 bits (242), Expect = e-132 Identities = 465/537 (86%), Gaps = 13/537 (2%) Strand = Plus / Minus Query: 88 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 147 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 148 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 207 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 208 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 263 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 138994 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 138936 Query: 264 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 323 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 138935 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 138876 Query: 324 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 383 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 138875 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 138816 Query: 384 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 443 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138815 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 138756 Query: 444 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 503 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 138755 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 138699 Query: 504 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 563 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| || Sbjct: 138698 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag-----gg 138644 Query: 564 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 |||||||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 138643 aacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatg 138587 Score = 480 bits (242), Expect = e-132 Identities = 465/537 (86%), Gaps = 13/537 (2%) Strand = Plus / Plus Query: 88 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 147 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 148 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 207 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 208 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 263 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 82883 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 82941 Query: 264 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 323 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 82942 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 83001 Query: 324 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 383 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 83002 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 83061 Query: 384 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 443 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 83062 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 83121 Query: 444 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 503 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 83122 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 83178 Query: 504 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 563 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| || Sbjct: 83179 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag-----gg 83233 Query: 564 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 |||||||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 83234 aacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatg 83290
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 474 bits (239), Expect = e-130 Identities = 505/589 (85%), Gaps = 6/589 (1%) Strand = Plus / Plus Query: 31 atccggagnattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 90 |||||||| |||||| ||||||| |||||| |||||||||||||||| || ||||| | Sbjct: 144020 atccggag-attcccgaataggttaaccttccaaactgcctgctgaattcagaagcagac 144078 Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 144079 aagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcga 144138 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 210 ||||| ||||| ||||||| |||| |||| ||||||||||||||| ||||||||||||| Sbjct: 144139 ttcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtggg 144198 Query: 211 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 270 |||| || || | || | ||||||||||| ||||||||| |||||| |||||| Sbjct: 144199 agagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtg 144258 Query: 271 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 330 | ||||||||||||| ||| | |||||| | |||| |||| |||||||||||||||| Sbjct: 144259 atagtccagtagccggaagtacagctagctcacgctccaacccaagtagcatggggcacg 144318 Query: 331 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 390 |||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||| Sbjct: 144319 caaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccg 144378 Query: 391 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 450 ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 144379 atagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaataga 144438 Query: 451 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 510 || |||||||| ||||||||||||||||||||| ||| | ||||||| ||||||||| Sbjct: 144439 acatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgc 144495 Query: 511 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 570 |||||||||||||||||||||||| ||||| ||||| ||||||||| |||||| | Sbjct: 144496 ctgttgaagaatgagccggcgacttgtaggcggtggcccggttaaggg-ggagaaccc-c 144553 Query: 571 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 619 ||||||||||||||||||||||||| | |||| |||||||| |||||| Sbjct: 144554 cggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttat 144602 Score = 474 bits (239), Expect = e-130 Identities = 505/589 (85%), Gaps = 6/589 (1%) Strand = Plus / Minus Query: 31 atccggagnattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 90 |||||||| |||||| ||||||| |||||| |||||||||||||||| || ||||| | Sbjct: 88831 atccggag-attcccgaataggttaaccttccaaactgcctgctgaattcagaagcagac 88773 Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 88772 aagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcga 88713 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 210 ||||| ||||| ||||||| |||| |||| ||||||||||||||| ||||||||||||| Sbjct: 88712 ttcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtggg 88653 Query: 211 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 270 |||| || || | || | ||||||||||| ||||||||| |||||| |||||| Sbjct: 88652 agagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtg 88593 Query: 271 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 330 | ||||||||||||| ||| | |||||| | |||| |||| |||||||||||||||| Sbjct: 88592 atagtccagtagccggaagtacagctagctcacgctccaacccaagtagcatggggcacg 88533 Query: 331 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 390 |||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||| Sbjct: 88532 caaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccg 88473 Query: 391 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 450 ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 88472 atagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaataga 88413 Query: 451 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 510 || |||||||| ||||||||||||||||||||| ||| | ||||||| ||||||||| Sbjct: 88412 acatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgc 88356 Query: 511 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 570 |||||||||||||||||||||||| ||||| ||||| ||||||||| |||||| | Sbjct: 88355 ctgttgaagaatgagccggcgacttgtaggcggtggcccggttaaggg-ggagaaccc-c 88298 Query: 571 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 619 ||||||||||||||||||||||||| | |||| |||||||| |||||| Sbjct: 88297 cggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttat 88249
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 432 bits (218), Expect = e-118 Identities = 328/356 (92%), Gaps = 8/356 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaa-ataggtcaacct 59 |||||||||| |||||||||||||| ||| |||||| | |||||| | |||||||||||| Sbjct: 2672 tgcttcgggg-agttgaaaataagcgtag-atccgg-ggattcccgatataggtcaacct 2728 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || |||||| ||||||||||| | |||||||||||||||| ||| |||||||||||||| Sbjct: 2729 ttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatct 2787 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2788 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 2847 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 239 |||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 2848 gcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggc 2907 Query: 240 gaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta 297 ||||| | ||| ||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 2908 gaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact- 2966 Query: 298 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 353 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2967 gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 432 bits (218), Expect = e-118 Identities = 328/356 (92%), Gaps = 8/356 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaa-ataggtcaacct 59 |||||||||| |||||||||||||| ||| |||||| | |||||| | |||||||||||| Sbjct: 927 tgcttcgggg-agttgaaaataagcgtag-atccgg-ggattcccgatataggtcaacct 983 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || |||||| ||||||||||| | |||||||||||||||| ||| |||||||||||||| Sbjct: 984 ttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatct 1042 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1043 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 1102 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 239 |||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 1103 gcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggc 1162 Query: 240 gaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta 297 ||||| | ||| ||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 1163 gaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact- 1221 Query: 298 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 353 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1222 gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 271 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 330 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 331 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 391 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 450 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 451 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 510 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 511 ctgttgaagaatgagccggcgactcataggcagtggcttg 550 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 50 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 109 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 110 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 169 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 170 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 229 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 230 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 289 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 290 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 349 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 350 gcaaggaccaccttgcaag 368 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%), Gaps = 5/124 (4%) Strand = Plus / Minus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 557 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 616 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 617 tatg 620 |||| Sbjct: 3134 tatg 3131 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 377 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 436 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 437 ggtagtgaaatagaacgtgaaacc 460 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 147 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 206 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 207 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 265 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 266 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 325 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 326 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 385 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 386 gaccgata 393 |||||||| Sbjct: 241 gaccgata 248
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 392 bits (198), Expect = e-106 Identities = 222/226 (98%), Gaps = 3/226 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 71 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 127 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 187 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 247 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 392 bits (198), Expect = e-106 Identities = 222/226 (98%), Gaps = 3/226 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 71 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 127 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 187 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 247 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 383 bits (193), Expect = e-103 Identities = 288/313 (92%), Gaps = 5/313 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||| ||||||| |||||||| |||||| |||||| ||||||| Sbjct: 177104 tgcttcgggg-agttgaaaatcagcatag-atccggag-attcccgaatagggcaacctt 177160 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||| |||| |||||||||||| ||||| Sbjct: 177161 tcgaactgc-tgctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatctt 177219 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 177220 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggag 177279 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcg 240 | |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 177280 ctgcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcg 177339 Query: 241 aagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 299 |||| | || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 177340 aagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 177399 Query: 300 ttatgctctgacc 312 ||| ||||||||| Sbjct: 177400 ttaggctctgacc 177412 Score = 190 bits (96), Expect = 4e-45 Identities = 117/124 (94%), Gaps = 5/124 (4%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 557 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 616 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 617 tatg 620 |||| Sbjct: 177520 tatg 177523 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagc 126 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagc 126 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 256 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 315 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 316 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 375 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 376 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 435 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 436 gggtagtgaaatagaacgtgaaaccgt 462 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 349 bits (176), Expect = 7e-93 Identities = 279/311 (89%), Gaps = 8/311 (2%) Strand = Plus / Plus Query: 310 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 369 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 370 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 429 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 430 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 489 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 490 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 549 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 550 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 609 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 615 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 669 Query: 610 cactgcttatg 620 ||||||||||| Sbjct: 670 cactgcttatg 680 Score = 184 bits (93), Expect = 2e-43 Identities = 120/129 (93%) Strand = Plus / Plus Query: 65 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 124 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 122 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 181 Query: 125 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 184 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 182 gccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagc 241 Query: 185 ctaaaccgt 193 ||||||||| Sbjct: 242 ctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 349 bits (176), Expect = 7e-93 Identities = 279/311 (89%), Gaps = 8/311 (2%) Strand = Plus / Plus Query: 310 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 369 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 370 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 429 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 430 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 489 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 490 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 549 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 550 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 609 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 628 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 682 Query: 610 cactgcttatg 620 ||||||||||| Sbjct: 683 cactgcttatg 693 Score = 184 bits (93), Expect = 2e-43 Identities = 120/129 (93%) Strand = Plus / Plus Query: 65 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 124 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 194 Query: 125 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 184 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 195 gccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagc 254 Query: 185 ctaaaccgt 193 ||||||||| Sbjct: 255 ctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 343 bits (173), Expect = 4e-91 Identities = 279/311 (89%), Gaps = 10/311 (3%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 490 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 491 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 550 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 551 gttaagggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 609 ||||||| || ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 733 gttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 786 Query: 610 cactgcttatg 620 ||||||||||| Sbjct: 787 cactgcttatg 797 Score = 182 bits (92), Expect = 9e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 65 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 124 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 239 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 298 Query: 125 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 184 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 299 gccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagc 358 Query: 185 ctaaaccg 192 |||||||| Sbjct: 359 ctaaaccg 366
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 339 bits (171), Expect = 7e-90 Identities = 336/389 (86%), Gaps = 9/389 (2%) Strand = Plus / Plus Query: 232 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 291 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 292 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 351 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 352 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 411 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 412 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 471 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 472 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 531 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 532 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 591 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 599 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 653 Query: 592 tcttaatagggcgattgtcactgcttatg 620 || ||| |||||||||||||||||||||| Sbjct: 654 tc-taacagggcgattgtcactgcttatg 681 Score = 200 bits (101), Expect = 4e-48 Identities = 134/145 (92%) Strand = Plus / Plus Query: 71 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 130 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 141 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 200 Query: 131 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 190 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 201 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 260 Query: 191 cgtgaaaacggggttgtgggagagc 215 || |||| ||||||||||||||||| Sbjct: 261 cgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 339 bits (171), Expect = 7e-90 Identities = 336/389 (86%), Gaps = 9/389 (2%) Strand = Plus / Minus Query: 232 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 291 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 292 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 351 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 352 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 411 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 412 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 471 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 472 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 531 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 532 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 591 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 124666 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 124612 Query: 592 tcttaatagggcgattgtcactgcttatg 620 || ||| |||||||||||||||||||||| Sbjct: 124611 tc-taacagggcgattgtcactgcttatg 124584 Score = 339 bits (171), Expect = 7e-90 Identities = 336/389 (86%), Gaps = 9/389 (2%) Strand = Plus / Plus Query: 232 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 291 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 292 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 351 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 352 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 411 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 412 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 471 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 472 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 531 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 532 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 591 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 95200 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 95254 Query: 592 tcttaatagggcgattgtcactgcttatg 620 || ||| |||||||||||||||||||||| Sbjct: 95255 tc-taacagggcgattgtcactgcttatg 95282 Score = 200 bits (101), Expect = 4e-48 Identities = 134/145 (92%) Strand = Plus / Minus Query: 71 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 130 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 125124 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 125065 Query: 131 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 190 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 125064 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 125005 Query: 191 cgtgaaaacggggttgtgggagagc 215 || |||| ||||||||||||||||| Sbjct: 125004 cgcgaaagcggggttgtgggagagc 124980 Score = 200 bits (101), Expect = 4e-48 Identities = 134/145 (92%) Strand = Plus / Plus Query: 71 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 130 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 94742 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 94801 Query: 131 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 190 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 94802 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 94861 Query: 191 cgtgaaaacggggttgtgggagagc 215 || |||| ||||||||||||||||| Sbjct: 94862 cgcgaaagcggggttgtgggagagc 94886
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 333 bits (168), Expect = 4e-88 Identities = 492/587 (83%), Gaps = 21/587 (3%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| |||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaaccttt--aactgc-tgctta 142 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 143 ttccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaa 200 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 196 |||||||||| |||||| |||||| ||| | |||| |||| ||||||||| || || Sbjct: 201 taaagcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaatcgctaa 260 Query: 197 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 256 || ||||||| || ||||||| ||| || || |||||| || || || |||| | | Sbjct: 261 aatggggttgggg---agcaataaaagtattttgttgctagacggagtagtggagttctg 317 Query: 257 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga-cccga 315 ||||||||||| | |||||||||| |||| |||| ||||||||||| | | ||||| Sbjct: 318 aaccctagatggtgagagtccagtagtataaagtatcattagcttatgcttttaacccga 377 Query: 316 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 375 |||||||||| || |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 378 gtagcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaaggctaaat 437 Query: 376 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 435 |||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 438 actcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatt 497 Query: 436 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 495 ||| |||||| |||||| ||||| | | ||| ||||||||||||||| || || | Sbjct: 498 ggggagtgaactagaacatgaaaac---atatgctaccaagcagtgggaggagacaggg- 553 Query: 496 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 555 |||||||| |||||| ||||||||||||| |||||||||||| | |||||| ||||||| Sbjct: 554 -ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaa 612 Query: 556 gggaacggaacccaccggagccgtagcgaaagcgagtcttaataggg 602 || |||| ||||||||||| |||||||||| |||||| |||||| Sbjct: 613 gg----ggaa-ccaccggagccatagcgaaagcaagtcttcataggg 654
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 405 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 464 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 465 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 524 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 525 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 327 bits (165), Expect = 3e-86 Identities = 295/335 (88%), Gaps = 10/335 (2%) Strand = Plus / Plus Query: 286 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 345 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 346 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 405 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 406 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 465 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 466 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 525 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 526 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 585 ||||||||||||| | |||||| ||||||||| |||| ||||||||||| ||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaa 662 Query: 586 agcgagtcttaatagggcgattgtcactgcttatg 620 ||| |||||| ||||||| | ||||| |||||||| Sbjct: 663 agcaagtcttcatagggcaaatgtcattgcttatg 697 Score = 133 bits (67), Expect = 8e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 85 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 144 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 145 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 204 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 205 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 264 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 265 a 265 | Sbjct: 325 a 325
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 309 bits (156), Expect = 6e-81 Identities = 263/296 (88%), Gaps = 7/296 (2%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 490 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 491 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 550 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 551 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 606 ||||| || || || ||||||||| |||||||||||||||||||||||||||| Sbjct: 615 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcgat 666 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 208 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 209 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 309 bits (156), Expect = 6e-81 Identities = 263/296 (88%), Gaps = 7/296 (2%) Strand = Plus / Minus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 490 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 491 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 550 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 551 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 606 ||||| || || || ||||||||| |||||||||||||||||||||||||||| Sbjct: 115047 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcgat 114996 Score = 309 bits (156), Expect = 6e-81 Identities = 263/296 (88%), Gaps = 7/296 (2%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 490 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 491 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 550 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 551 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 606 ||||| || || || ||||||||| |||||||||||||||||||||||||||| Sbjct: 86941 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcgat 86992 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Minus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 115514 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 115455 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115454 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86474 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 86533 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86534 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 297 bits (150), Expect = 2e-77 Identities = 198/209 (94%), Gaps = 4/209 (1%) Strand = Plus / Minus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| ||||| || |||||| |||||||||||||| Sbjct: 79697 tgcttcgggg-agttgaaaataagcatag-atccg-aggattcccgaataggtcaacctt 79641 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 79640 tcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatctt 79582 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79581 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaa 79522 Query: 181 cagcctaaaccgtgaaaacggggttgtgg 209 ||||||||||||||||||||||||||||| Sbjct: 79521 cagcctaaaccgtgaaaacggggttgtgg 79493
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 295 bits (149), Expect = 9e-77 Identities = 308/359 (85%), Gaps = 4/359 (1%) Strand = Plus / Plus Query: 256 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 315 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 316 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 375 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 376 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 435 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 436 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 495 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 496 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 555 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4666 Query: 556 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 614 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4667 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4193 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 4252 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 189 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 4253 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 295 bits (149), Expect = 9e-77 Identities = 308/359 (85%), Gaps = 4/359 (1%) Strand = Plus / Plus Query: 256 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 315 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 316 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 375 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 376 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 435 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 436 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 495 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 496 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 555 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 556 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 614 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 219 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 189 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 220 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 295 bits (149), Expect = 9e-77 Identities = 308/359 (85%), Gaps = 4/359 (1%) Strand = Plus / Plus Query: 256 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 315 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 316 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 375 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 376 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 435 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 436 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 495 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 496 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 555 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 556 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 614 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 219 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 189 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 220 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 264 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 322 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 323 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 382 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 383 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 442 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 443 gaaatagaacgtgaaaccgtgctgagctcc 472 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 264 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 322 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 323 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 382 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 383 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 442 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 443 gaaatagaacgtgaaaccgtgctgagctcc 472 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 264 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 322 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 323 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 382 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 383 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 442 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 443 gaaatagaacgtgaaaccgtgctgagctcc 472 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 465 tgagctcccaagcagtgggaggggaaagtgatc 497 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575 Score = 46.1 bits (23), Expect = 0.14 Identities = 80/99 (80%) Strand = Plus / Plus Query: 520 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 579 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9056578 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9056637 Query: 580 agcgaaagcgagtcttaatagggcgattgtcactgctta 618 ||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9056638 agcgaaagcgactcttaataggacaattttcactactta 9056676
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 264 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 322 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 323 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 382 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 383 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 442 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 443 gaaatagaacgtgaaaccgtgctgagctcc 472 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 465 tgagctcccaagcagtgggaggggaaagtgatc 497 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272 Score = 46.1 bits (23), Expect = 0.14 Identities = 80/99 (80%) Strand = Plus / Plus Query: 520 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 579 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9128275 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9128334 Query: 580 agcgaaagcgagtcttaatagggcgattgtcactgctta 618 ||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9128335 agcgaaagcgactcttaataggacaattttcactactta 9128373
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 287 bits (145), Expect = 2e-74 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 310 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 369 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 370 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 429 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 430 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 489 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 490 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 549 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 550 ggttaag 556 ||||||| Sbjct: 574 ggttaag 580 Score = 159 bits (80), Expect = 1e-35 Identities = 95/100 (95%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 agagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 175 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||| ||||| |||||||||||||||| ||||||||||| Sbjct: 176 tccctcagtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 276 bits (139), Expect = 8e-71 Identities = 257/293 (87%), Gaps = 10/293 (3%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 490 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 491 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 550 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 551 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 603 ||||||| | | | |||||||| |||||||||||||||| |||||||| Sbjct: 605 gttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggc 653 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 151 ttcccgtagtagcggcgagcgaa 173 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 490 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 491 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 550 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 551 gttaagg 557 ||||||| Sbjct: 644 gttaagg 650 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 190 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 270 bits (136), Expect = 5e-69 Identities = 160/164 (97%), Gaps = 3/164 (1%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 75839 tgcttcgggg-agttgaaaataagcatag-atccggag-attcccaaataggtcaacctt 75895 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75896 ttaaactgcctgcggaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 75955 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 164 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75956 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 431 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 431 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ggcgaactgaaacatcttag 122 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 260 bits (131), Expect = 5e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 305 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 364 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 365 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 424 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 425 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 484 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 485 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 544 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 545 ggcttggttaagg 557 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 158 agtagcggcgagcgaaatgggagcagcctaaacc 191 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 252 bits (127), Expect = 1e-63 Identities = 225/257 (87%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 304 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 363 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 364 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 423 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 424 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 483 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 484 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 543 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 544 tggcttggttaagggaa 560 ||||| ||||||||||| Sbjct: 617 tggctgggttaagggaa 633 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 161 aagagacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 220 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 189 || || ||||||||||||||||||||||| |||||||| Sbjct: 221 tttcctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 490 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 491 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 550 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 551 gttaagg 557 ||||||| Sbjct: 611 gttaagg 617 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 69 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 128 |||||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| Sbjct: 126 cctgctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccg 185 Query: 129 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 ||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||| Sbjct: 186 gaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaa 245 Query: 189 accg 192 |||| Sbjct: 246 accg 249 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 569 accggagccgtagcgaaagcgagtcttaatagggcgattgtcact 613 ||||||||| ||||||||||||||| ||||||||| ||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcact 668
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 5e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 239 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 298 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 299 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 358 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 359 accttgcaaggctaaatactcctgggtgaccga 391 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 490 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 491 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 572 ggagccgtagcgaaagcgagtcttaatagggcg 604 |||||| |||||||||||||||| ||||||||| Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcg 682
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 490 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 491 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 572 ggagccgtagcgaaagcgagtcttaatagggcg 604 |||||| |||||||||||||||| ||||||||| Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcg 2451
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 238 bits (120), Expect = 2e-59 Identities = 219/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 429 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 430 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 489 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 490 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 549 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 550 ggttaaggg 558 ||||||||| Sbjct: 590 ggttaaggg 598 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 97 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 156 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 157 tagtagcggcgagcgaaatgggagcagcctaaac 190 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 238 bits (120), Expect = 2e-59 Identities = 261/306 (85%), Gaps = 9/306 (2%) Strand = Plus / Plus Query: 315 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 374 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 375 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 434 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 435 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 494 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 495 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 554 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 555 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 614 || |||| |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 622 ag-----ggaatccaccgaagccatagcgaaagcaagtctt-tcagggcgattgtcactg 675 Query: 615 cttatg 620 ||||| Sbjct: 676 tttatg 681 Score = 151 bits (76), Expect = 3e-33 Identities = 109/120 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 ||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 162 agagaaaacctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgat 221 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 211 |||| ||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 222 tccctcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 236 bits (119), Expect = 7e-59 Identities = 217/249 (87%), Gaps = 3/249 (1%) Strand = Plus / Plus Query: 310 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 369 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 370 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 429 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 430 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 489 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 490 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 549 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 550 ggttaaggg 558 ||||||||| Sbjct: 1021 ggttaaggg 1029 Score = 155 bits (78), Expect = 2e-34 Identities = 136/154 (88%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 40 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 99 |||||| |||||| |||||| | ||||||| |||||||| ||| || | ||||||||| Sbjct: 511 attcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagagacaa 569 Query: 100 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 159 ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 570 cctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattcccttag 629 Query: 160 tagcggcgagcgaaatgggagcagcctaaaccgt 193 ||| ||||||||||| |||| ||||||||||||| Sbjct: 630 tagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 236 bits (119), Expect = 7e-59 Identities = 194/217 (89%), Gaps = 9/217 (4%) Strand = Plus / Plus Query: 404 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 463 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 464 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 523 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 524 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 583 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgtagcg 171 Query: 584 aaagcgagtcttaatagggcgattgtcactgcttatg 620 |||||||||||| ||||||| |||||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgcttatg 208
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 258 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 317 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 318 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 377 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 378 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 437 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 438 gtagtgaaatagaacgtgaaa 458 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 123 bits (62), Expect = 7e-25 Identities = 176/206 (85%), Gaps = 6/206 (2%) Strand = Plus / Plus Query: 1 tgcttcggggnagttgaaaataagcatagnatccggagnattcccaaataggtcaacctt 60 |||||||||| |||| ||||||| ||||| |||||||| |||||| ||||||| |||||| Sbjct: 72 tgcttcgggg-agttaaaaataaacatag-atccggag-attcccgaataggtaaacctt 128 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| |||| | |||||| |||| ||| ||| ||||||| |||||||| |||||| Sbjct: 129 taaaactgc-tgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatctt 185 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 186 agtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaagggaa 245 Query: 181 cagcctaaaccgtgaaaacggggttg 206 |||||||||||| |||| ||||||| Sbjct: 246 cagcctaaaccgctaaaatggggttg 271 Score = 109 bits (55), Expect = 1e-20 Identities = 108/124 (87%), Gaps = 5/124 (4%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 557 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 616 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 617 tatg 620 |||| Sbjct: 681 tatg 684
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 103 bits (52), Expect = 7e-19 Identities = 147/172 (85%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 453 gtgaaa 458 ||||| Sbjct: 503 atgaaa 508 Score = 103 bits (52), Expect = 7e-19 Identities = 147/172 (85%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 557 gg 558 || Sbjct: 601 gg 602
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 103 bits (52), Expect = 7e-19 Identities = 147/172 (85%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 103 bits (52), Expect = 7e-19 Identities = 147/172 (85%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 103 bits (52), Expect = 7e-19 Identities = 147/172 (85%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 103 bits (52), Expect = 7e-19 Identities = 141/164 (85%), Gaps = 5/164 (3%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||| |||||| |||||| ||||| ||||| ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 453 gtgaaa 458 ||||| Sbjct: 503 atgaaa 508 Score = 103 bits (52), Expect = 7e-19 Identities = 147/172 (85%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 557 gg 558 || Sbjct: 601 gg 602
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 103 bits (52), Expect = 7e-19 Identities = 147/172 (85%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 103 bits (52), Expect = 7e-19 Identities = 147/172 (85%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 103 bits (52), Expect = 7e-19 Identities = 147/172 (85%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 148/172 (86%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggcgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 103 bits (52), Expect = 7e-19 Identities = 147/172 (85%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 103 bits (52), Expect = 7e-19 Identities = 147/172 (85%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 103 bits (52), Expect = 7e-19 Identities = 147/172 (85%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 103 bits (52), Expect = 7e-19 Identities = 147/172 (85%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 488 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 489 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 548 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 549 tggttaagg 557 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 488 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 489 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 548 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 549 tggttaagg 557 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 3e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 490 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 491 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 151 ttcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccg 461 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 137 bits (69), Expect = 5e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 87 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 146 |||||||||| |||| || |||||||||||||| ||||||| ||||||||||||||||| Sbjct: 136 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaac 195 Query: 147 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 196 gcgattcccatagtagcggcgagcgaaaagggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgact 534 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 580 agcgaaagcgagtcttaatagggc 603 ||||||||||||||| |||||||| Sbjct: 873 agcgaaagcgagtctgaatagggc 896
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 273 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 332 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 333 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 392 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 393 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 452 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 453 gtgaaa 458 ||||| Sbjct: 504 atgaaa 509 Score = 103 bits (52), Expect = 7e-19 Identities = 141/164 (85%), Gaps = 5/164 (3%) Strand = Plus / Plus Query: 17 aaaataagcatagnatccggagnattcccaaataggtcaaccttttaaactgcctgctga 76 ||||||| ||||| |||||||| |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatag-atccggag-attcccgaataggtaaacctttaaaactgc-tgctta 144 Query: 77 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 136 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 145 ttccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaa 202 Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||| |||||| |||||| ||||| ||||| ||||| Sbjct: 203 taaagcaaaagttattcccatagtagtggcgaacgaaaagggag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 557 gg 558 || Sbjct: 602 gg 603
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 210 bits (106), Expect = 4e-51 Identities = 190/215 (88%), Gaps = 11/215 (5%) Strand = Plus / Plus Query: 406 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 465 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 466 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 525 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 526 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 585 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaa 169 Query: 586 agcgagtcttaatagggcgattgtcactgcttatg 620 |||||||||| ||||||| |||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatg 204
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 87 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 146 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 147 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgact 534 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 110 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 169 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 170 cgaaatgggagcagcctaaacc 191 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 498 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 581 gcgaaagcgagtcttaatagggcga 605 |||||||||||||| |||||||||| Sbjct: 665 gcgaaagcgagtctgaatagggcga 689
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 6e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 488 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 489 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 546 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 569 accggagccgtagcgaaagcgagtcttaatagggcg 604 ||||||||| ||||||||||||||| ||||||||| Sbjct: 685 accggagcccaagcgaaagcgagtctgaatagggcg 720
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 1e-48 Identities = 217/248 (87%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 429 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 430 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 489 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 490 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 549 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 550 ggttaagg 557 |||||||| Sbjct: 675 ggttaagg 682 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 310 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 369 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 370 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 429 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 430 cc 431 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 89 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 148 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 149 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 501 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 315 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 374 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 375 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 434 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 435 tgggtagtgaaatagaacgtgaaacc 460 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 1929 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 1988 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 211 |||| |||||| ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1989 tcccttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 429 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 430 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 488 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 489 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 548 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 549 tggttaagg 557 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 429 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 430 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 488 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 489 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 548 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 549 tggttaagg 557 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 570 ccggagccgtagcgaaagcgagtcttaatagggcgat 606 |||||||| ||||||||||||||| ||||||||||| Sbjct: 155586 ccggagcccaagcgaaagcgagtctgaatagggcgat 155550 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 570 ccggagccgtagcgaaagcgagtcttaatagggcgat 606 |||||||| ||||||||||||||| ||||||||||| Sbjct: 78306 ccggagcccaagcgaaagcgagtctgaatagggcgat 78342
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 371 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 429 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 430 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 487 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 488 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 548 tt 549 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 110 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 169 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 170 cgaa 173 |||| Sbjct: 238 cgaa 241 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 581 gcgaaagcgagtcttaatagggcg 604 |||||||||||||| ||||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcg 690
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 110 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 169 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 170 cgaaatgggagcagcctaaacc 191 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 570 ccggagccgtagcgaaagcgagtcttaa 597 |||||||| |||||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa 847
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 166 cgagcgaaatgggagcagcctaaac 190 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 548 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 570 ccggagccgtagcgaaagcgagtcttaatagggcg 604 |||||||| ||||||||||||||| ||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcg 735
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 2e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 110 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 169 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 170 cgaaatgggagcagcctaaacc 191 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 2e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 555 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 371 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 429 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 430 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 487 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 488 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 548 tt 549 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 110 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 169 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 170 cgaa 173 |||| Sbjct: 219 cgaa 222 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 581 gcgaaagcgagtcttaatagggcg 604 |||||||||||||| ||||||||| Sbjct: 648 gcgaaagcgagtctgaatagggcg 671
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 570 ccggagccgtagcgaaagcgagtcttaatagggcg 604 |||||||| ||||||||||||||| ||||||||| Sbjct: 151740 ccggagcccaagcgaaagcgagtctgaatagggcg 151706 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 570 ccggagccgtagcgaaagcgagtcttaatagggcg 604 |||||||| ||||||||||||||| ||||||||| Sbjct: 42463 ccggagcccaagcgaaagcgagtctgaatagggcg 42497
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 198 bits (100), Expect = 2e-47 Identities = 103/104 (99%) Strand = Plus / Plus Query: 517 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 577 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 105
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 371 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 429 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 430 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 487 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 488 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 548 tt 549 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 110 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 169 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 170 cgaa 173 |||| Sbjct: 238 cgaa 241 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 581 gcgaaagcgagtcttaatagggcg 604 |||||||||||||| ||||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcg 690
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 570 ccggagccgtagcgaaagcgagtcttaatagggcg 604 |||||||| ||||||||||||||| ||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcg 735
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 166 cgagcgaaatgggagcagcctaaac 190 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 548 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 570 ccggagccgtagcgaaagcgagtcttaatagggcg 604 |||||||| ||||||||||||||| ||||||||| Sbjct: 635 ccggagcccaagcgaaagcgagtctgaatagggcg 669
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 570 ccggagccgtagcgaaagcgagtcttaatagggcg 604 |||||||| ||||||||||||||| ||||||||| Sbjct: 720 ccggagcccaagcgaaagcgagtctgaatagggcg 754
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 314 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 373 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 374 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 433 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 434 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 493 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 494 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 542 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 196 bits (99), Expect = 6e-47 Identities = 102/103 (99%) Strand = Plus / Plus Query: 518 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 578 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 620 |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 103
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 431 ccagtgggtagtgaaatagaacgtgaaacc 460 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgact 534 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 570 ccggagccgtagcgaaagcgagtcttaatagggcgat 606 ||||||||| ||||||||| ||||| ||||||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgat 657
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 419 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 478 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 479 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 528 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 315 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 374 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 375 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 434 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 435 tgggtagtgaaatagaacgtgaaacc 460 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 155 bits (78), Expect = 2e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 162 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 221 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 211 |||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||| Sbjct: 222 tcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtggga 281 Query: 212 ga 213 || Sbjct: 282 ga 283 Score = 113 bits (57), Expect = 7e-22 Identities = 106/121 (87%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 559 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 560 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 619 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 620 g 620 | Sbjct: 681 g 681
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 315 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 374 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 375 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 434 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 435 tgggtagtgaaatagaacgtgaaacc 460 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 155 bits (78), Expect = 2e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 3196 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 3255 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 211 |||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||| Sbjct: 3256 tcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtggga 3315 Query: 212 ga 213 || Sbjct: 3316 ga 3317 Score = 113 bits (57), Expect = 7e-22 Identities = 106/121 (87%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 559 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 560 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 619 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 620 g 620 | Sbjct: 3715 g 3715
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 431 ccagtgggtagtgaaatagaacgtgaaacc 460 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgact 534 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 570 ccggagccgtagcgaaagcgagtcttaatagggcgat 606 ||||||||| ||||||||| ||||| ||||||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgat 25466
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 314 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 373 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 374 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 433 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 434 gtgggtagtgaaatagaacgtgaaaccgt 462 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 507 gtgcctgttgaagaatgagccggcgactcatagg 540 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 429 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 430 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 489 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 490 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 534 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 190 bits (96), Expect = 4e-45 Identities = 117/124 (94%), Gaps = 5/124 (4%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 557 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 616 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 617 tatg 620 |||| Sbjct: 177 tatg 180
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 190 bits (96), Expect = 4e-45 Identities = 117/124 (94%), Gaps = 5/124 (4%) Strand = Plus / Plus Query: 497 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 557 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 616 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 617 tatg 620 |||| Sbjct: 161 tatg 164
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 570 ccggagccgtagcgaaagcgagtcttaatagggcg 604 |||||||| ||||||||||||||| ||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcg 678
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 190 bits (96), Expect = 4e-45 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 490 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 491 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 549 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 550 ggttaagg 557 |||||||| Sbjct: 800 ggttaagg 807 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 570 ccggagccgtagcgaaagcgagtcttaatagggcga 605 |||||||| ||||||||||||||||||||||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcga 851
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 558 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 574 agccgtagcgaaagcgagtcttaatagggcg 604 |||| |||||||||||||||| ||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcg 686
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 486 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 486 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 486 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 429 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 430 cccagtgggtagtgaaatagaacgtgaaaccgt 462 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 95.6 bits (48), Expect = 2e-16 Identities = 94/109 (86%), Gaps = 4/109 (3%) Strand = Plus / Plus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 558 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagg- 687 Query: 559 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 607 ||| | |||||||| ||||||||| |||||||||||||||||| Sbjct: 688 ---agaatcatccggagccagagcgaaagcaagtcttaatagggcgatt 733
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 9e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 429 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 430 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 486 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 487 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 163 ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 155 gcgaattgaaacatcttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagc 214 Query: 164 ggcgagcgaaatgggagcagcctaaac 190 |||||||| ||||||| |||||||||| Sbjct: 215 ggcgagcggaatgggaacagcctaaac 241 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 580 agcgaaagcgagtcttaatagggcg 604 ||||||||||||||| ||||||||| Sbjct: 643 agcgaaagcgagtctgaatagggcg 667
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgt 462 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 137 bits (69), Expect = 5e-29 Identities = 132/153 (86%) Strand = Plus / Plus Query: 40 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 99 |||||| |||||| ||||||| || ||| |||| ||||| ||| |||| ||||||||| Sbjct: 97 attcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaa 156 Query: 100 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 159 || |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| ||| Sbjct: 157 cccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttag 216 Query: 160 tagcggcgagcgaaatgggagcagcctaaaccg 192 ||| ||||||||||| |||| ||| |||||||| Sbjct: 217 tagtggcgagcgaaaagggatcagtctaaaccg 249 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 498 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 182 bits (92), Expect = 9e-43 Identities = 162/182 (89%), Gaps = 10/182 (5%) Strand = Plus / Plus Query: 440 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 499 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 559 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 364802 Query: 560 acggaacccaccggagccgtagcgaaa-gcgagtcttaatagggcgattgtcactgctta 618 ||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 364803 --ggaacccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 619 tg 620 || Sbjct: 364861 tg 364862 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 385 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 431 ccagtgggtagtgaaatagaacgtgaaacc 460 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 166 cgagcgaaatgggagcagcctaaacc 191 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 580 agcgaaagcgagtcttaatagggcg 604 ||||||||||||||||||||||||| Sbjct: 659 agcgaaagcgagtcttaatagggcg 683
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 431 ccagtgggtagtgaaatagaacgtgaaacc 460 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgact 534 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 431 ccagtgggtagtgaaatagaacgtgaaacc 460 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 166 cgagcgaaatgggagcagcctaaacc 191 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 580 agcgaaagcgagtcttaatagggcg 604 ||||||||||||||||||||||||| Sbjct: 659 agcgaaagcgagtcttaatagggcg 683
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 1e-41 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 489 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 490 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 549 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 550 ggttaa 555 |||||| Sbjct: 731 ggttaa 736 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 111 gaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagc 170 |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 280 gaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccttagtagcggcgagc 339 Query: 171 gaaatgggagcagcctaaacc 191 ||||| | ||||||||||| Sbjct: 340 gaaatcccaacagcctaaacc 360
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 314 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 373 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 374 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 433 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 434 gtgggtagtgaaatagaacgtgaaaccgt 462 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 498 tctgaccgcgtgcctgttgaagaatgagccggcga 532 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 580 agcgaaagcgagtcttaatagggcgattgtcac 612 |||||||||||||| |||||||||||| ||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcac 294
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 6e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 431 ccagt-gggtagtgaaatagaacgtgaaaccgt 462 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 557 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaagg 771
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtg 463 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 163 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 164 ggcgagcgaaatgggagcagcctaaacc 191 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 572 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 611 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 511
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtg 463 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 163 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 164 ggcgagcgaaatgggagcagcctaaacc 191 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 572 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 611 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 511
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtg 463 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 107 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 166 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 167 gagcgaaatgggagcagcctaaacc 191 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 572 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 611 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 524
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtg 463 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 163 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 164 ggcgagcgaaatgggagcagcctaaacc 191 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 572 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 611 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 524
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtg 463 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 163 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 164 ggcgagcgaaatgggagcagcctaaacc 191 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 540 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 572 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 611 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 511
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtg 463 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 163 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 164 ggcgagcgaaatgggagcagcctaaacc 191 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 572 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 611 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 524
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtg 463 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 163 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 164 ggcgagcgaaatgggagcagcctaaacc 191 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 572 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 611 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 524
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 311 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 370 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 371 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 430 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 431 ccagtgggtagtgaaatagaacgtgaaaccgtg 463 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 163 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 164 ggcgagcgaaatgggagcagcctaaacc 191 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 500 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 572 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 611 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 524
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 6e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 310 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 369 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 370 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 429 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 430 c 430 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 97 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 156 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 157 tagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 499 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 547 ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggc 599 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 233 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 282 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,072,913 Number of Sequences: 3902068 Number of extensions: 4072913 Number of successful extensions: 121741 Number of sequences better than 10.0: 26592 Number of HSP's better than 10.0 without gapping: 26417 Number of HSP's successfully gapped in prelim test: 210 Number of HSP's that attempted gapping in prelim test: 75751 Number of HSP's gapped (non-prelim): 43898 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
