ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baall15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF498268.1| Haynaldia villosa clone kong28 mRNA Length = 1474 Score = 278 bits (140), Expect = 6e-72 Identities = 180/193 (93%), Gaps = 3/193 (1%) Strand = Plus / Minus Query: 1 tggcgtgcatcaataccttgcagagctgctccatgttcaagggggccaaggccgaggcca 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 866 tggcgtgcatcaataccttgcagagctgctccatgttcaaaggggccaaggctgaggcca 807 Query: 61 gaaggggcagcagagccggcagcggcgggagcttcgggtgccgggcctncacgttcatgg 120 ||||||||| |||| | ||| |||||||||||||||||||| | ||||||||||| Sbjct: 806 gaaggggcaa---agccaccggcgcagggagcttcgggtgccgggcgtccacgttcatgg 750 Query: 121 acgggagcgggctccggctcgggctcgacgagaaccccgacgccatcatctccggcgagt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 acgggagcgggctccggctcgggctcgacgagaaccccgacgccatcatctccggcgagt 690 Query: 181 ggcccgagaactt 193 ||||||||||||| Sbjct: 689 ggcccgagaactt 677
>gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA Length = 1061 Score = 210 bits (106), Expect = 1e-51 Identities = 172/193 (89%), Gaps = 6/193 (3%) Strand = Plus / Plus Query: 1 tggcgtgcatcaataccttgcagagctgctccatgttcaagggggccaaggccgaggcca 60 |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 45 tggcgtgcatcaataccttgcagagctgctccatgttcaaaggggccaagagtaaggcca 104 Query: 61 gaaggggcagcagagccggcagcggcgggagcttcgggtgccgggcctncacgttcatgg 120 |||| || || |||| || ||||||| ||| | ||||||||| | ||||||||||| Sbjct: 105 gaagaggtag---agcc---agtggcgggacctttgagtgccgggcgtccacgttcatgg 158 Query: 121 acgggagcgggctccggctcgggctcgacgagaaccccgacgccatcatctccggcgagt 180 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 159 acgggagcgggctccggctcgggctcgacgagaaccccgatgccatcatctccggggagt 218 Query: 181 ggcccgagaactt 193 ||||||||||||| Sbjct: 219 ggcccgagaactt 231
>ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2 mRNA Length = 916 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 143 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 199 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 200 gaaccctgaagccatcatctccggtgagtggccggagaactt 241
>ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2 mRNA Length = 1002 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 143 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 199 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 200 gaaccctgaagccatcatctccggtgagtggccggagaactt 241
>ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2 mRNA Length = 956 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 149 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 205 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 206 gaaccctgaagccatcatctccggtgagtggccggagaactt 247
>ref|XM_468415.1| Oryza sativa (japonica cultivar-group), mRNA Length = 833 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 135 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 191 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 192 gaaccctgaagccatcatctccggtgagtggccggagaactt 233
>gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planthopper-induced resistance protein 1 (Bi1) mRNA, complete cds Length = 1098 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 401 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 457 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 458 gaaccctgaagccatcatctccggtgagtggccggagaactt 499
>gb|AY346465.1| Oryza sativa (indica cultivar-group) putative brown planthopper susceptibility protein Hd002A mRNA, complete cds Length = 1265 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 567 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 623 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 624 gaaccctgaagccatcatctccggtgagtggccggagaactt 665
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 35110983 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 35111039 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 35111040 gaaccctgaagccatcatctccggtgagtggccggagaactt 35111081
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 6339 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 6395 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 6396 gaaccctgaagccatcatctccggtgagtggccggagaactt 6437
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 84146 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 84202 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 84203 gaaccctgaagccatcatctccggtgagtggccggagaactt 84244
>dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G08, full insert sequence Length = 833 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 135 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 191 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 192 gaaccctgaagccatcatctccggtgagtggccggagaactt 233
>dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H03, full insert sequence Length = 994 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 135 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 191 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 192 gaaccctgaagccatcatctccggtgagtggccggagaactt 233
>dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B10, full insert sequence Length = 916 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 143 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 199 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 200 gaaccctgaagccatcatctccggtgagtggccggagaactt 241
>dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B08, full insert sequence Length = 1002 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 143 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 199 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 200 gaaccctgaagccatcatctccggtgagtggccggagaactt 241
>dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106O04, full insert sequence Length = 1514 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 136 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 192 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 193 gaaccctgaagccatcatctccggtgagtggccggagaactt 234
>dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B04, full insert sequence Length = 4217 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Minus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 3207 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 3151 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 3150 gaaccctgaagccatcatctccggtgagtggccggagaactt 3109
>dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P24, full insert sequence Length = 955 Score = 89.7 bits (45), Expect = 3e-15 Identities = 88/102 (86%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 cttcgggtgccgggcctncacgttcatggacgggagcgggctccggctcgggctcgacga 151 |||| |||||||||| | |||||||||||||||||| |||||||| | | ||||||| Sbjct: 148 cttccggtgccgggcatcgacgttcatggacgggagc---ctccggctagagatcgacga 204 Query: 152 gaaccccgacgccatcatctccggcgagtggcccgagaactt 193 |||||| || |||||||||||||| |||||||| |||||||| Sbjct: 205 gaaccctgaagccatcatctccggtgagtggccggagaactt 246
>gb|AY112171.1| Zea mays CL11049_1 mRNA sequence Length = 803 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Plus Query: 132 ctccggctcgggctcgacgagaaccccgacgccatcatctc 172 |||||||||| ||| |||||||||||||| || |||||||| Sbjct: 82 ctccggctcgagctggacgagaaccccgaggcgatcatctc 122
>gb|AC116389.12| Mus musculus chromosome 7, clone RP23-21B1, complete sequence Length = 236139 Score = 46.1 bits (23), Expect = 0.039 Identities = 23/23 (100%) Strand = Plus / Minus Query: 11 caataccttgcagagctgctcca 33 ||||||||||||||||||||||| Sbjct: 100404 caataccttgcagagctgctcca 100382
>ref|XM_471230.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 42.1 bits (21), Expect = 0.62 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 tctccggcgagtggcccgagaactt 193 |||||||||||||||| |||||||| Sbjct: 197 tctccggcgagtggccggagaactt 221
>gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, complete sequence Length = 186659 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gcgggctccggctcgggctcg 147 ||||||||||||||||||||| Sbjct: 12555 gcgggctccggctcgggctcg 12535
>gb|AC158583.3| Mus musculus chromosome 3, clone RP24-318B11, complete sequence Length = 168986 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gcgggctccggctcgggctcg 147 ||||||||||||||||||||| Sbjct: 30479 gcgggctccggctcgggctcg 30459
>gb|AY519500.1| Gallus gallus CNR/Pcdh-alpha gene cluster, complete sequence Length = 187517 Score = 42.1 bits (21), Expect = 0.62 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 ggacgggagcgggctccggctcgggctcg 147 ||||||| |||||||| |||||||||||| Sbjct: 98299 ggacgggcgcgggctcgggctcgggctcg 98327 Score = 42.1 bits (21), Expect = 0.62 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 ggacgggagcgggctccggctcgggctcg 147 ||||||| |||||||| |||||||||||| Sbjct: 89238 ggacgggcgcgggctcgggctcgggctcg 89266 Score = 42.1 bits (21), Expect = 0.62 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 ggacgggagcgggctccggctcgggctcg 147 ||||||| |||||||| |||||||||||| Sbjct: 80055 ggacgggcgcgggctcgggctcgggctcg 80083 Score = 42.1 bits (21), Expect = 0.62 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 ggacgggagcgggctccggctcgggctcg 147 ||||||| |||||||| |||||||||||| Sbjct: 71030 ggacgggcgcgggctcgggctcgggctcg 71058 Score = 42.1 bits (21), Expect = 0.62 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 ggacgggagcgggctccggctcgggctcg 147 ||||||| |||||||| |||||||||||| Sbjct: 64607 ggacgggcgcgggctcgggctcgggctcg 64635 Score = 42.1 bits (21), Expect = 0.62 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 ggacgggagcgggctccggctcgggctcg 147 ||||||| |||||||| |||||||||||| Sbjct: 34905 ggacgggcgcgggctcgggctcgggctcg 34933
>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20, complete sequence Length = 138572 Score = 42.1 bits (21), Expect = 0.62 Identities = 24/25 (96%) Strand = Plus / Minus Query: 169 tctccggcgagtggcccgagaactt 193 |||||||||||||||| |||||||| Sbjct: 32244 tctccggcgagtggccggagaactt 32220
>gb|AF487888.1| Gallus gallus suppressor of fused mRNA, complete cds Length = 1455 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gcgggctccggctcgggctcg 147 ||||||||||||||||||||| Sbjct: 43 gcgggctccggctcgggctcg 63
>gb|AC093881.2| Homo sapiens BAC clone RP11-655B23 from 4, complete sequence Length = 181245 Score = 42.1 bits (21), Expect = 0.62 Identities = 24/25 (96%) Strand = Plus / Plus Query: 82 gcggcgggagcttcgggtgccgggc 106 ||||||||||||| ||||||||||| Sbjct: 45056 gcggcgggagcttggggtgccgggc 45080
>ref|NG_004818.1| Gallus gallus cadherin-related neuronal receptor 10 pseudogene (CNRV10) Length = 98944 Score = 42.1 bits (21), Expect = 0.62 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 ggacgggagcgggctccggctcgggctcg 147 ||||||| |||||||| |||||||||||| Sbjct: 19840 ggacgggcgcgggctcgggctcgggctcg 19868 Score = 42.1 bits (21), Expect = 0.62 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 ggacgggagcgggctccggctcgggctcg 147 ||||||| |||||||| |||||||||||| Sbjct: 10779 ggacgggcgcgggctcgggctcgggctcg 10807 Score = 42.1 bits (21), Expect = 0.62 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 ggacgggagcgggctccggctcgggctcg 147 ||||||| |||||||| |||||||||||| Sbjct: 1596 ggacgggcgcgggctcgggctcgggctcg 1624
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.62 Identities = 24/25 (96%) Strand = Plus / Minus Query: 169 tctccggcgagtggcccgagaactt 193 |||||||||||||||| |||||||| Sbjct: 2416342 tctccggcgagtggccggagaactt 2416318
>ref|NM_204264.1| Gallus gallus suppressor of fused homolog (Drosophila) (SUFU), mRNA Length = 1455 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gcgggctccggctcgggctcg 147 ||||||||||||||||||||| Sbjct: 43 gcgggctccggctcgggctcg 63
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 0.62 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 cgagaaccccgacgccatcatctcc 173 |||| |||||||||||||||||||| Sbjct: 439047 cgagcaccccgacgccatcatctcc 439071
>dbj|AK066843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082B01, full insert sequence Length = 964 Score = 42.1 bits (21), Expect = 0.62 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 tctccggcgagtggcccgagaactt 193 |||||||||||||||| |||||||| Sbjct: 287 tctccggcgagtggccggagaactt 311
>gb|U29204.1|HSU29204 Human mineralocorticoid receptor (hmr1a) gene, 5' untranslated region Length = 2105 Score = 42.1 bits (21), Expect = 0.62 Identities = 24/25 (96%) Strand = Plus / Minus Query: 82 gcggcgggagcttcgggtgccgggc 106 ||||||||||||| ||||||||||| Sbjct: 623 gcggcgggagcttggggtgccgggc 599
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 0.62 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 cgagaaccccgacgccatcatctcc 173 |||| |||||||||||||||||||| Sbjct: 87690 cgagcaccccgacgccatcatctcc 87714
>gb|U48393.1|HSU48393 Human mineralocorticoid receptor alpha (hMR) gene, promoter, exon 1 Length = 1771 Score = 42.1 bits (21), Expect = 0.62 Identities = 24/25 (96%) Strand = Plus / Minus Query: 82 gcggcgggagcttcgggtgccgggc 106 ||||||||||||| ||||||||||| Sbjct: 643 gcggcgggagcttggggtgccgggc 619
>emb|X97925.1|HSHMRPROM H.sapiens hMR gene, complete promoter region Length = 8661 Score = 42.1 bits (21), Expect = 0.62 Identities = 24/25 (96%) Strand = Plus / Minus Query: 82 gcggcgggagcttcgggtgccgggc 106 ||||||||||||| ||||||||||| Sbjct: 2216 gcggcgggagcttggggtgccgggc 2192
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 ggccgaggccagaaggggcagcag 73 ||||||||||||||||||| |||| Sbjct: 2788190 ggccgaggccagaaggggcggcag 2788213
>ref|XM_611254.2| PREDICTED: Bos taurus hypothetical LOC508098 (LOC508098), mRNA Length = 923 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 665 cgggctccggctcgggctcg 646
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cgggagcgggctccggctcgggct 145 ||||||| |||||||||||||||| Sbjct: 1839703 cgggagccggctccggctcgggct 1839680
>ref|NM_031392.2| Mus musculus WD repeat domain 6 (Wdr6), mRNA Length = 4169 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 2724 caagggggccagggccgaggccag 2701
>ref|XM_653577.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1065.2), mRNA Length = 1290 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 27 cgggctccggctcgggctcg 8
>gb|AC165327.4| Mus musculus chromosome 19, clone RP24-318N5, complete sequence Length = 191038 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 gccgaggccagaaggggcagcaga 74 ||||||||||||||||||| |||| Sbjct: 122869 gccgaggccagaaggggcatcaga 122846
>ref|NM_015278.3| Homo sapiens SAM and SH3 domain containing 1 (SASH1), mRNA Length = 7709 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 539 cgggctccggctcgggctcg 520
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 40.1 bits (20), Expect = 2.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 146 cgacgagaaccccgacgccatcatctcc 173 ||||||||||| ||| |||||||||||| Sbjct: 77071 cgacgagaacctcgaggccatcatctcc 77098
>ref|XM_850346.1| PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa (LOC612613), mRNA Length = 998 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 agaaggggcagcagagccgg 79 |||||||||||||||||||| Sbjct: 42 agaaggggcagcagagccgg 23
>gb|BC035951.1| Mus musculus WD repeat domain 6, mRNA (cDNA clone IMAGE:4506719), complete cds Length = 2083 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 703 caagggggccagggccgaggccag 680
>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence Length = 215356 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 gccgaggccagaaggggcagcaga 74 ||||||||||||||||||| |||| Sbjct: 214947 gccgaggccagaaggggcatcaga 214970
>gb|BC053993.1| Mus musculus cDNA clone IMAGE:6314898, **** WARNING: chimeric clone **** Length = 6454 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 5037 caagggggccagggccgaggccag 5014
>gb|AY351960.1|AY351960S01 Homo sapiens PEPE1 gene, exon 1 Length = 677 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 539 cgggctccggctcgggctcg 520
>emb|AL513164.13| Human DNA sequence from clone RP11-400P17 on chromosome 6 Contains the 5' part of a novel gene, the 5' part of the gene for KIAA0790 protein (KIAA0790) and a CpG island, complete sequence Length = 154288 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 97968 cgggctccggctcgggctcg 97949
>ref|XM_964282.1| PREDICTED: Tribolium castaneum similar to CG8639-PA (LOC657847), mRNA Length = 3999 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 ggcagcggcgggagcttcgggtgc 101 |||||||||||| ||||||||||| Sbjct: 3494 ggcagcggcgggtgcttcgggtgc 3471
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 2.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 122 cgggagcgggctccggctcgggctcgac 149 ||||||||||||||||||| || ||||| Sbjct: 938406 cgggagcgggctccggctccggttcgac 938379
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 88969 cgggctccggctcgggctcg 88988 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 130 ggctccggctcgggctcga 148 ||||||||||||||||||| Sbjct: 264377 ggctccggctcgggctcga 264359
>gb|BC054367.1| Mus musculus WD repeat domain 6, mRNA (cDNA clone MGC:62549 IMAGE:5346943), complete cds Length = 4104 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 2652 caagggggccagggccgaggccag 2629
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 aagggggccaaggccgaggc 58 |||||||||||||||||||| Sbjct: 2353174 aagggggccaaggccgaggc 2353155
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 2449373 cgggctccggctcgggctcg 2449354
>dbj|AK146617.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920035B07 product:WD repeat domain 6, full insert sequence Length = 4044 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 2681 caagggggccagggccgaggccag 2658
>dbj|AK166265.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830027A05 product:WD repeat domain 6, full insert sequence Length = 4066 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 2702 caagggggccagggccgaggccag 2679
>dbj|AK163752.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030011J15 product:WD repeat domain 6, full insert sequence Length = 4019 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 2657 caagggggccagggccgaggccag 2634
>dbj|AK169357.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:I920192C19 product:WD repeat domain 6, full insert sequence Length = 4088 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 2725 caagggggccagggccgaggccag 2702
>dbj|AK165935.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730021L06 product:WD repeat domain 6, full insert sequence Length = 4059 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 2688 caagggggccagggccgaggccag 2665
>dbj|AK052235.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330012A03 product:WD REPEAT PROTEIN WDR6 homolog [Mus musculus], full insert sequence Length = 4035 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 2665 caagggggccagggccgaggccag 2642
>dbj|AK046119.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230342P20 product:WD repeat domain 6, full insert sequence Length = 4056 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 2692 caagggggccagggccgaggccag 2669
>dbj|AK079258.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530062C16 product:GABA-A RECEPTOR EPSILON-LIKE SUBUNIT homolog [Mus musculus], full insert sequence Length = 1939 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 1356 cgggctccggctcgggctcg 1337
>dbj|AK037181.1| Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched library, clone:A030006O19 product:WD repeat domain 6, full insert sequence Length = 4063 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 2701 caagggggccagggccgaggccag 2678
>gb|AF348591.1|AF348591 Mus musculus WD repeat protein WDR6 mRNA, complete cds Length = 4107 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 2720 caagggggccagggccgaggccag 2697
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 2.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 146 cgacgagaaccccgacgccatcatctcc 173 ||||||||||| ||| |||||||||||| Sbjct: 19900004 cgacgagaacctcgaggccatcatctcc 19900031
>dbj|AK205565.1| Mus musculus cDNA, clone:Y2G0102B21, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000035223, based on BLAT search Length = 137 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 106 caagggggccagggccgaggccag 83
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcgacga 151 |||||||||| ||||||||||||| Sbjct: 8133044 cgggctccggatcgggctcgacga 8133021
>dbj|AK025495.1| Homo sapiens cDNA: FLJ21842 fis, clone HEP01849 Length = 4744 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 539 cgggctccggctcgggctcg 520
>emb|AJ335985.1|HSA335985 Homo sapiens genomic sequence surrounding NotI site, clone NR1-NC8RS Length = 706 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 282 cgggctccggctcgggctcg 263
>emb|AJ335962.1|HSA335962 Homo sapiens genomic sequence surrounding NotI site, clone NR1-0F24RS Length = 773 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 282 cgggctccggctcgggctcg 263
>emb|AJ328720.1|HSA328720 Homo sapiens genomic sequence surrounding NotI site, clone NR1-NJ6R Length = 683 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 282 cgggctccggctcgggctcg 263
>gb|BC050894.1| Mus musculus WD repeat domain 6, mRNA (cDNA clone MGC:63325 IMAGE:5708880), complete cds Length = 4169 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 2724 caagggggccagggccgaggccag 2701
>dbj|AK063232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-F06, full insert sequence Length = 751 Score = 40.1 bits (20), Expect = 2.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 146 cgacgagaaccccgacgccatcatctcc 173 ||||||||||| ||| |||||||||||| Sbjct: 87 cgacgagaacctcgaggccatcatctcc 114
>tpe|BN000088.1|HSA000088 TPA: TPA_exp: Homo sapiens mRNA for putative adapter and scaffold protein (SASH1 gene) Length = 7709 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 539 cgggctccggctcgggctcg 520
>emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1077A2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 208102 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 150766 cgggctccggctcgggctcg 150747
>emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1085N6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 242832 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 53543 cgggctccggctcgggctcg 53524
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 2.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 146 cgacgagaaccccgacgccatcatctcc 173 ||||||||||| ||| |||||||||||| Sbjct: 20184983 cgacgagaacctcgaggccatcatctcc 20185010
>emb|AJ507735.1|HSA507735 Homo sapiens mRNA for putative adapter and scaffold protein (SASH1 gene) Length = 7240 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 70 cgggctccggctcgggctcg 51
>emb|AL807816.7| Mouse DNA sequence from clone RP23-13H12 on chromosome X, complete sequence Length = 193219 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 36579 cgggctccggctcgggctcg 36598
>dbj|AB018333.1| Homo sapiens mRNA for KIAA0790 protein, partial cds Length = 4469 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctcg 147 |||||||||||||||||||| Sbjct: 282 cgggctccggctcgggctcg 263
>dbj|AB041854.1| Mus musculus wdp122 mRNA for WD-repeat protein p122, complete cds Length = 4156 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 caagggggccaaggccgaggccag 61 ||||||||||| |||||||||||| Sbjct: 2790 caagggggccagggccgaggccag 2767
>ref|XM_509852.1| PREDICTED: Pan troglodytes similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) (LOC452797), mRNA Length = 856 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 211 cgggctccggctcgggctc 193
>ref|NM_174569.2| Bos taurus poly(A) binding protein, nuclear 1 (PABPN1), mRNA Length = 3918 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 2300 cgggctccggctcgggctc 2282
>ref|XM_513360.1| PREDICTED: Pan troglodytes similar to potassium voltage-gated channel KQT-like protein 4 isoform a; potassium channel KQT-like 4 (LOC456800), mRNA Length = 2961 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 182 cgggctccggctcgggctc 200
>ref|XM_586000.2| PREDICTED: Bos taurus similar to mitogen-activated protein kinase kinase kinase kinase 4 isoform 2 (LOC509109), mRNA Length = 3939 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 147 gacgagaaccccgacgcca 165 ||||||||||||||||||| Sbjct: 598 gacgagaaccccgacgcca 616
>ref|XM_425021.1| PREDICTED: Gallus gallus similar to rapamycin insensitive companion of mTOR; rictor (LOC427447), mRNA Length = 4281 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 ttgcagagctgctccatgt 36 ||||||||||||||||||| Sbjct: 2180 ttgcagagctgctccatgt 2162
>ref|XM_421131.1| PREDICTED: Gallus gallus similar to vacuolar protein sorting protein 18 (LOC423207), mRNA Length = 3454 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 gaaggggcagcagagccgg 79 ||||||||||||||||||| Sbjct: 2803 gaaggggcagcagagccgg 2821
>gb|BC010939.1| Homo sapiens poly(A) binding protein, nuclear 1, mRNA (cDNA clone MGC:13564 IMAGE:4333442), complete cds Length = 1007 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 213 cgggctccggctcgggctc 195
>ref|XM_956851.1| Neurospora crassa OR74A hypothetical protein (NCU06584.1) partial mRNA Length = 2352 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 39 aagggggccaaggccgaggccag 61 ||||||||||||| ||||||||| Sbjct: 2157 aagggggccaagggcgaggccag 2135
>ref|XM_326438.1| Neurospora crassa OR74A hypothetical protein (NCU06584.1) partial mRNA Length = 2352 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 39 aagggggccaaggccgaggccag 61 ||||||||||||| ||||||||| Sbjct: 2157 aagggggccaagggcgaggccag 2135
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 69 agcagagccggcagcggcgggag 91 ||||||||||| ||||||||||| Sbjct: 29217 agcagagccgggagcggcgggag 29239
>ref|XM_871210.1| PREDICTED: Bos taurus similar to C-jun-amino-terminal kinase interacting protein 2 (JNK-interacting protein 2) (JIP-2) (JNK MAP kinase scaffold protein 2) (Islet-brain-2) (IB-2) (Mitogen-activated protein kinase 8-interacting protein 2) (LOC618893), mRNA Length = 3086 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 943 cgggctccggctcgggctc 925
>gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from chromosome unknown, complete sequence Length = 142253 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 67457 cgggctccggctcgggctc 67439
>gb|AC090437.62| Mus musculus strain C57BL/6J clone rp23-11f20 map 6, complete sequence Length = 227127 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 154843 cgggctccggctcgggctc 154825
>gb|BC055229.1| Danio rerio wu:fi40b08, mRNA (cDNA clone IMAGE:2640087), partial cds Length = 1877 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 gagccggcagcggcgggag 91 ||||||||||||||||||| Sbjct: 288 gagccggcagcggcgggag 306
>gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequence Length = 157884 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 52734 cgggctccggctcgggctc 52752
>ref|XM_978045.1| PREDICTED: Mus musculus potassium voltage-gated channel, subfamily Q, member 4 (Kcnq4), mRNA Length = 2458 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 128 cgggctccggctcgggctc 146
>ref|XM_143960.7| PREDICTED: Mus musculus potassium voltage-gated channel, subfamily Q, member 4, transcript variant 1 (Kcnq4), mRNA Length = 2512 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 182 cgggctccggctcgggctc 200
>ref|XM_130764.7| PREDICTED: Mus musculus TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 1 (Taf4a), mRNA Length = 4422 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 agggggccaaggccgaggc 58 ||||||||||||||||||| Sbjct: 908 agggggccaaggccgaggc 926
>ref|XM_858343.1| PREDICTED: Canis familiaris similar to R12C12.6, transcript variant 2 (LOC476843), mRNA Length = 768 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 30 cgggctccggctcgggctc 12
>ref|XM_534047.2| PREDICTED: Canis familiaris similar to R12C12.6, transcript variant 1 (LOC476843), mRNA Length = 1711 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 30 cgggctccggctcgggctc 12
>ref|XM_537373.2| PREDICTED: Canis familiaris BCL2-like 2, transcript variant 1 (BCL2L2), mRNA Length = 1985 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 380 cgggctccggctcgggctc 362
>ref|XM_844377.1| PREDICTED: Canis familiaris BCL2-like 2, transcript variant 2 (BCL2L2), mRNA Length = 1212 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 380 cgggctccggctcgggctc 362
>emb|CR663773.2|CNS0FB4Z Tetraodon nigroviridis full-length cDNA Length = 686 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 ggggcagcagagccggcag 82 ||||||||||||||||||| Sbjct: 29 ggggcagcagagccggcag 11
>emb|CR648622.2|CNS0EZG4 Tetraodon nigroviridis full-length cDNA Length = 633 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 ggggcagcagagccggcag 82 ||||||||||||||||||| Sbjct: 30 ggggcagcagagccggcag 12
>emb|CR637284.2|CNS0EQP6 Tetraodon nigroviridis full-length cDNA Length = 755 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 ggggcagcagagccggcag 82 ||||||||||||||||||| Sbjct: 29 ggggcagcagagccggcag 11
>gb|BC036753.1| Homo sapiens aspartate beta-hydroxylase domain containing 2, mRNA (cDNA clone MGC:45029 IMAGE:5186506), complete cds Length = 1931 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 5 cgggctccggctcgggctc 23
>emb|Z99714.2|HS1048E9 Human DNA sequence from clone CTB-1048E9 on chromosome 22, complete sequence Length = 87646 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 14354 cgggctccggctcgggctc 14372
>ref|NM_004643.1| Homo sapiens poly(A) binding protein, nuclear 1 (PABPN1), mRNA Length = 3107 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 1487 cgggctccggctcgggctc 1469
>gb|DQ065755.1| Uncultured marine bacterium 66A03 putative permease, hypothetical proteins, putative peptidyl prolyl cis-trans isomerase, hypothetical protein, putative ferredoxin reductase, proteorhodopsin, putative geranylgeranyl pyrophosphate synthetase, putative phytoene dehydrogenase CrtI, putative phytoene synthase, putative lycopene cyclase, predictet Brp-like protein Blh, hypothetical protein, putative L-lactate dehydrogenase, putative cold-shock dead-box protein A, putative molybdopterin converting factor large subunit, putative molybdopterin biosynthesis protein, putative molybdopterin-guanine dinucleotide biosynthesis protein, putative molybdenum cofactor biosynthesis enzyme, putative citrate lyase beta subunit, hypothetical protein, putative glutathione S-transferase, hypothetical protein, putative inner mitochondrial membrane protein Sco1p, hypothetical protein, putative metallo-beta-lactamase superfamily protein, putative dehydrogenases, putative histidinol dehydrogenase, hypothetical proteins, putative malate dehydrogenase, putative Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit, putative chromate transport protein ChrA, putative aerobic-type carbon monoxide dehydrogenase large subunit, putative FAD/FMN-containing dehydrogenases, and putative serine-pyruvate aminotransferase genes, complete cds; and putative NAD-dependent aldehyde dehydrogenases gene, partial cds Length = 44868 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 tgcatcaataccttgcaga 24 ||||||||||||||||||| Sbjct: 11272 tgcatcaataccttgcaga 11290
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 130 ggctccggctcgggctcga 148 ||||||||||||||||||| Sbjct: 29436 ggctccggctcgggctcga 29418
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 130 ggctccggctcgggctcga 148 ||||||||||||||||||| Sbjct: 293284 ggctccggctcgggctcga 293266
>emb|AJ132741.1|BPE132741 Bordetella pertussis hupB, tonB, exbB, exbD and basR genes and ORF1 (partial) Length = 4439 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 130 ggctccggctcgggctcga 148 ||||||||||||||||||| Sbjct: 1656 ggctccggctcgggctcga 1638
>gb|AC119677.2| Homo sapiens chromosome 1 clone RP5-1066H13, complete sequence Length = 170397 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 19239 cgggctccggctcgggctc 19257
>emb|CR859017.1| Pongo pygmaeus mRNA; cDNA DKFZp469H221 (from clone DKFZp469H221) Length = 1193 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 124 ggagcgggctccggctcgg 142 ||||||||||||||||||| Sbjct: 49 ggagcgggctccggctcgg 67
>emb|X89969.1|BTPOLAPII B.taurus mRNA for polyA binding protein II Length = 3918 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 2300 cgggctccggctcgggctc 2282
>gb|DQ397606.1| Cenarchaeum symbiosum clone C09E11, complete sequence Length = 41244 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 130 ggctccggctcgggctcga 148 ||||||||||||||||||| Sbjct: 14280 ggctccggctcgggctcga 14298
>gb|DQ397579.1| Cenarchaeum symbiosum clone C15E09, complete sequence Length = 43895 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 35690 cgggctccggctcgggctc 35672
>emb|CR618592.1| full-length cDNA clone CS0DE011YF11 of Placenta of Homo sapiens (human) Length = 1561 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 207 cgggctccggctcgggctc 189
>emb|CR615102.1| full-length cDNA clone CS0DC001YH11 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1676 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 110 cgggctccggctcgggctc 92
>emb|CR613703.1| full-length cDNA clone CS0DI075YN24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 883 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 121 cgggctccggctcgggctc 103
>emb|CR613466.1| full-length cDNA clone CS0DF022YN14 of Fetal brain of Homo sapiens (human) Length = 1789 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 101 cgggctccggctcgggctc 83
>emb|CR603469.1| full-length cDNA clone CS0DL006YI17 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1933 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 68 cgggctccggctcgggctc 86
>emb|CR592559.1| full-length cDNA clone CS0DC027YP05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1590 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 58 cgggctccggctcgggctc 40
>ref|NM_004700.2| Homo sapiens potassium voltage-gated channel, KQT-like subfamily, member 4 (KCNQ4), transcript variant 1, mRNA Length = 2335 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 264 cgggctccggctcgggctc 282
>ref|NM_172163.1| Homo sapiens potassium voltage-gated channel, KQT-like subfamily, member 4 (KCNQ4), transcript variant 2, mRNA Length = 2173 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 264 cgggctccggctcgggctc 282
>dbj|AK157145.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830204M13 product:junctophilin 2, full insert sequence Length = 4148 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 2120 cgggctccggctcgggctc 2102
>dbj|AK040190.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430075J21 product:potassium voltage-gated channel, subfamily Q, member 4, full insert sequence Length = 1571 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 115 cgggctccggctcgggctc 133
>ref|NM_020437.3| Homo sapiens aspartate beta-hydroxylase domain containing 2 (ASPHD2), mRNA Length = 1931 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 5 cgggctccggctcgggctc 23
>gb|BC102506.1| Bos taurus similar to R12C12.6, mRNA (cDNA clone MGC:127949 IMAGE:7954169), complete cds Length = 1944 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 141 cgggctccggctcgggctc 123
>dbj|AK028249.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3002003A21 product:ubiquitin specific protease 27, X chromosome, full insert sequence Length = 4272 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 346 cgggctccggctcgggctc 328 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 286 cgggctccggctcgggctc 268 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 202 cgggctccggctcgggctc 184 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 190 cgggctccggctcgggctc 172
>gb|AF113011.1|AF113011 Homo sapiens clone FLB2302 mRNA sequence Length = 837 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 790 cgggctccggctcgggctc 808
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 69 agcagagccggcagcggcgggag 91 ||||||||||| ||||||||||| Sbjct: 26178169 agcagagccgggagcggcgggag 26178191
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 5387049 cgggctccggctcgggctc 5387067
>gb|AC026329.14| Homo sapiens 3 BAC RP11-325J6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 117404 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 44 ggccaaggccgaggccagaaggg 66 ||||||||| ||||||||||||| Sbjct: 51673 ggccaaggctgaggccagaaggg 51651
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 155 ccccgacgccatcatctccggcg 177 |||||||||||||||| |||||| Sbjct: 1355715 ccccgacgccatcatcgccggcg 1355737
>emb|AL606971.22| Mouse DNA sequence from clone RP23-123I20 on chromosome 4, complete sequence Length = 91841 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 62 aaggggcagcagagccggc 80 ||||||||||||||||||| Sbjct: 88536 aaggggcagcagagccggc 88518
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 tcaagggggccaaggccga 55 ||||||||||||||||||| Sbjct: 4327709 tcaagggggccaaggccga 4327691
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 cagcagagccggcagcggc 86 ||||||||||||||||||| Sbjct: 3378334 cagcagagccggcagcggc 3378316
>gb|AF087669.1|AF087669 Bordetella bronchiseptica TonB (tonB), ExbB (exbB), and ExbD (exbD) genes, complete cds Length = 2446 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 130 ggctccggctcgggctcga 148 ||||||||||||||||||| Sbjct: 492 ggctccggctcgggctcga 474
>gb|AF105203.1|HSKCNQ4G01 Homo sapiens voltage-gated potassium channel KCNQ4 (KCNQ4) gene, exon 1 Length = 522 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 264 cgggctccggctcgggctc 282
>gb|AF105202.1|AF105202 Homo sapiens voltage-gated potassium channel KCNQ4 (KCNQ4) mRNA, complete cds Length = 2335 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 264 cgggctccggctcgggctc 282
>emb|AL049829.4|CNS0000B Human chromosome 14 DNA sequence BAC R-124D2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196292 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 103732 cgggctccggctcgggctc 103714
>emb|BX247976.1|CNSLT1I5B human full-length cDNA clone CS0DF018YN09 of Fetal brain of Homo sapiens (human) Length = 1945 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 211 cgggctccggctcgggctc 193
>gb|AF026029.1|AF026029 Homo sapiens poly(A) binding protein II (PABP2) gene, complete cds Length = 6002 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 1487 cgggctccggctcgggctc 1469
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 158 cgacgccatcatctccggc 176 ||||||||||||||||||| Sbjct: 5296608 cgacgccatcatctccggc 5296626
>gb|L22864.1|STMWHIB12X Streptomyces aureofaciens whiB operon, complete sequence Length = 4615 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 146 cgacgagaaccccgacgcc 164 ||||||||||||||||||| Sbjct: 1318 cgacgagaaccccgacgcc 1336
>ref|NM_021566.1| Mus musculus junctophilin 2 (Jph2), mRNA Length = 2681 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 2177 cgggctccggctcgggctc 2159
>ref|NM_019461.1| Mus musculus ubiquitin specific peptidase 27, X chromosome (Usp27x), mRNA Length = 4272 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 346 cgggctccggctcgggctc 328 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 286 cgggctccggctcgggctc 268 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 202 cgggctccggctcgggctc 184 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 190 cgggctccggctcgggctc 172
>ref|NM_001034507.1| Bos taurus similar to R12C12.6 (MGC127949), mRNA Length = 1944 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 141 cgggctccggctcgggctc 123
>emb|AL663104.17| Mouse DNA sequence from clone RP23-207H18 on chromosome X, complete sequence Length = 211462 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 149321 cgggctccggctcgggctc 149339 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 149309 cgggctccggctcgggctc 149327 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 149225 cgggctccggctcgggctc 149243 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 149165 cgggctccggctcgggctc 149183
>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete sequence Length = 193057 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 agggggccaaggccgaggc 58 ||||||||||||||||||| Sbjct: 96613 agggggccaaggccgaggc 96595
>gb|U12206.1|HSU12206 Human clone pL713 hypothetical protein mRNA, partial cds Length = 766 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 722 cgggctccggctcgggctc 740
>emb|AL606924.14| Mouse DNA sequence from clone RP23-18M2 on chromosome 4, complete sequence Length = 180444 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 164064 cgggctccggctcgggctc 164046
>emb|AL589876.11| Mouse DNA sequence from clone RP23-117O11 on chromosome 2, complete sequence Length = 221782 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 126550 cgggctccggctcgggctc 126568
>dbj|AB024447.1| Mus musculus JP-2 mRNA for junctophilin type 2, complete cds Length = 2681 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 cgggctccggctcgggctc 146 ||||||||||||||||||| Sbjct: 2177 cgggctccggctcgggctc 2159 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,217,635 Number of Sequences: 3902068 Number of extensions: 1217635 Number of successful extensions: 96945 Number of sequences better than 10.0: 158 Number of HSP's better than 10.0 without gapping: 158 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94949 Number of HSP's gapped (non-prelim): 1980 length of query: 194 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 172 effective length of database: 17,147,199,772 effective search space: 2949318360784 effective search space used: 2949318360784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
