Clone Name	baalk10
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|L48286.1|BLYSRP543R Hordeum vulgare Srp54-2 mRNA, complete se...	1211	0.0
2	gb|L48284.1|BLYSRP541R Hordeum vulgare signal recognition partic...	684	0.0
3	gb|L48285.1|BLYSRP542R Hordeum vulgare signal recognition partic...	684	0.0
4	ref|XM_475677.1| Oryza sativa (japonica cultivar-group), predic...	301	2e-78
5	dbj|AK068958.1| Oryza sativa (japonica cultivar-group) cDNA clon...	301	2e-78
6	dbj|AB115419.1| Oryza sativa (japonica cultivar-group) srp54-2 m...	301	2e-78
7	ref|NM_191436.1| Oryza sativa (japonica cultivar-group), predic...	210	4e-51
8	dbj|AK120871.1| Oryza sativa (japonica cultivar-group) cDNA clon...	210	4e-51
9	dbj|AB114831.1| Oryza sativa (japonica cultivar-group) srp54-1 m...	210	4e-51
10	gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome...	180	4e-42
11	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	180	4e-42
12	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	121	3e-24
13	dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic D...	121	3e-24
14	dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic D...	121	3e-24
15	emb|Z34527.1|LESSRPSPR L.esculentum (UC82-B) mRNA for 54-kD sign...	119	1e-23
16	ref|NM_103783.1| Arabidopsis thaliana 7S RNA binding / GTP bindi...	115	2e-22
17	gb|AF446864.1|AF446864 Arabidopsis thaliana At1g48900/F27K7_8 mR...	115	2e-22
18	gb|AY054273.1| Arabidopsis thaliana At1g48900/F27K7_8 mRNA, comp...	115	2e-22
19	gb|AY052331.1| Arabidopsis thaliana At1g48900/F27K7_8 mRNA, comp...	115	2e-22
20	gb|AY106300.1| Zea mays PCO070291 mRNA sequence	111	3e-21
21	emb|BX813619.1|CNS0AEMN Arabidopsis thaliana Full-length cDNA Co...	107	5e-20
22	gb|BT017553.1| Zea mays clone EL01N0424E11.c mRNA sequence	103	7e-19
23	gb|AC135414.31| Medicago truncatula clone mth2-8n20, complete se...	98	4e-17
24	gb|AC147009.5| Medicago truncatula clone mth2-139j3, complete se...	98	4e-17
25	ref|NM_101400.2| Arabidopsis thaliana ATHSRP54A; 7S RNA binding ...	82	3e-12
26	dbj|AK221684.1| Arabidopsis thaliana mRNA for putative signal re...	82	3e-12
27	gb|AF344329.1| Arabidopsis thaliana clone C00252 (e) unknown pro...	82	3e-12
28	gb|AY086187.1| Arabidopsis thaliana clone 22158 mRNA, complete s...	82	3e-12
29	ref|NM_124327.1| Arabidopsis thaliana 7S RNA binding / GTP bindi...	80	1e-11
30	ref|XM_775557.1| PREDICTED: Strongylocentrotus purpuratus simila...	62	2e-06
31	gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 se...	62	2e-06
32	gb|L19997.1|ATHSRP54A Arabidopsis thaliana signal recognition pa...	62	2e-06
33	dbj|AB023033.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	58	4e-05
34	gb|U12126.1|ATU12126 Arabidopsis thaliana clone SRP-54B signal r...	58	4e-05
35	gb|AC084414.2|AC084414 Arabidopsis thaliana chromosome 1 BAC F27...	54	6e-04
36	gb|U12127.1|ATU12127 Arabidopsis thaliana clone SRP-54C signal r...	54	6e-04
37	gb|AY100457.1| Geodia cydonium signal recognition particle 54 kD...	48	0.036
38	ref|NM_011899.3| Mus musculus signal recognition particle 54 (Sr...	46	0.14
39	gb|BC019683.1| Mus musculus signal recognition particle 54, mRNA...	46	0.14
40	ref|XM_976538.1| PREDICTED: Mus musculus similar to signal recog...	46	0.14
41	ref|XM_976577.1| PREDICTED: Mus musculus similar to signal recog...	46	0.14
42	ref|XM_976502.1| PREDICTED: Mus musculus similar to signal recog...	46	0.14
43	ref|XM_976391.1| PREDICTED: Mus musculus similar to signal recog...	46	0.14
44	emb|X16319.1|MMSRP54 Mouse mRNA for 54K subunit of signal recogn...	46	0.14
45	dbj|AK136033.1| Mus musculus in vitro fertilized eggs cDNA, RIKE...	46	0.14
46	dbj|AK146826.1| Mus musculus 17 days embryo stomach cDNA, RIKEN ...	46	0.14
47	dbj|AK011928.1| Mus musculus 10 days embryo whole body cDNA, RIK...	46	0.14
48	gb|AC119954.12| Mus musculus chromosome 1, clone RP24-450P2, com...	44	0.57
49	gb|AC137558.3| Mus musculus BAC clone RP23-16I17 from chromosome...	44	0.57
50	gb|AC160529.6| Mus musculus chromosome 1, clone RP24-141F19, com...	44	0.57
51	ref|XM_792876.1| PREDICTED: Strongylocentrotus purpuratus simila...	44	0.57
52	emb|BX026548.1|CNS08SNC Single read from an extremity of a full-...	44	0.57
53	emb|X16318.1|CFSRP54 Canine mRNA for signal recognition particle...	44	0.57
54	ref|NM_001003272.1| Canis familiaris signal recognition particle...	44	0.57
55	ref|XM_315212.2| Anopheles gambiae str. PEST ENSANGP00000020889 ...	44	0.57
56	emb|Z54271.1|CEF21D5 Caenorhabditis elegans Cosmid F21D5, comple...	42	2.2
57	emb|Z34518.1|LESSRPSPG L.esculentum (cv. Rentita) mRNA for 54-kD...	42	2.2
58	emb|BX842614.9| Zebrafish DNA sequence from clone DKEY-76I15 in ...	42	2.2
59	ref|NM_069106.3| Caenorhabditis elegans F21D5.7 (F21D5.7) mRNA, ...	42	2.2
60	dbj|AB028615.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	42	2.2
61	emb|CR956393.14| Pig DNA sequence from clone CH242-163M14 on chr...	42	2.2
62	dbj|AP004926.1| Lotus japonicus genomic DNA, chromosome 4, clone...	42	2.2
63	gb|AC102616.7| Mus musculus chromosome 18, clone RP23-425L21, co...	40	8.9
64	gb|AC168306.7| Mus musculus chromosome 18, clone RP23-225N9, com...	40	8.9
65	ref|XM_524774.1| PREDICTED: Pan troglodytes LOC469389 (LOC469389...	40	8.9
66	ref|XM_676714.1| Aspergillus nidulans FGSC A4 hypothetical prote...	40	8.9
67	gb|AC157901.4| Mus musculus chromosome 18, clone RP23-189P21, co...	40	8.9
68	gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, com...	40	8.9
69	gb|AC124182.4| Mus musculus BAC clone RP23-207J3 from chromosome...	40	8.9
70	gb|AC124422.5| Mus musculus BAC clone RP24-326L13 from chromosom...	40	8.9
71	emb|CR728994.2|CNS0GPFS Tetraodon nigroviridis full-length cDNA	40	8.9
72	gb|BC044991.1| Xenopus laevis signal recognition particle 54 kDa...	40	8.9
73	emb|CR724674.1|CNS0GM3S Tetraodon nigroviridis full-length cDNA	40	8.9
74	emb|CR681634.2|CNS0FOWE Tetraodon nigroviridis full-length cDNA	40	8.9
75	ref|XM_663484.1| Cryptosporidium hominis TU502 signal recognitio...	40	8.9
76	emb|CR392328.18| Zebrafish DNA sequence from clone DKEYP-108C1 i...	40	8.9
77	emb|AL445530.19| Human DNA sequence from clone RP1-61F10 on chro...	40	8.9
78	emb|AL356137.10| Human DNA sequence from clone RP11-515I12 on ch...	40	8.9
79	gb|AF541281.1| Homo sapiens plasticity related gene 1 mRNA, comp...	40	8.9
80	emb|AL139425.8| Human DNA sequence from clone RP4-788L13 on chro...	40	8.9
81	gb|AY304518.1| Homo sapiens lipid phosphate phosphatase-related ...	40	8.9
82	emb|AL627282.1| Salmonella enterica serovar Typhi (Salmonella ty...	40	8.9
83	gb|BC042963.1| Homo sapiens plasticity related gene 1, mRNA (cDN...	40	8.9
84	emb|BX547996.10| Zebrafish DNA sequence from clone CH211-212H16 ...	40	8.9
85	emb|AL672181.11| Mouse DNA sequence from clone RP23-223D16 on ch...	40	8.9
86	emb|AL834390.1|HSM805469 Homo sapiens mRNA; cDNA DKFZp761A0623 (...	40	8.9
87	gb|AF521595.1| Salmonella typhimurium class A nonspecific acid p...	40	8.9
88	dbj|AK056665.1| Homo sapiens cDNA FLJ32103 fis, clone OCBBF20012...	40	8.9
89	gb|AC008829.7| Homo sapiens chromosome 5 clone CTD-2140K22, comp...	40	8.9
90	ref|NM_014839.3| Homo sapiens plasticity related gene 1 (LPPR4),...	40	8.9
91	emb|BX510649.12| Zebrafish DNA sequence from clone CH211-158M24 ...	40	8.9
92	gb|AF366353.1|AF366353 Salmonella typhi acid phosphatase precurs...	40	8.9
93	dbj|AB007924.3| Homo sapiens mRNA for KIAA0455 protein, partial cds	40	8.9
94	gb|AF357013.1| Homo sapiens brain-specific phosphatidic acid pho...	40	8.9
95	gb|AC104035.6| Homo sapiens chromosome 15, clone RP11-661P17, co...	40	8.9
96	gb|AC108673.11| Homo sapiens 3 BAC RP11-434H6 (Roswell Park Canc...	40	8.9
97	gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat...	40	8.9
98	emb|BX682227.3| Mouse DNA sequence from clone RP23-190N2 on chro...	40	8.9
99	gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi...	40	8.9
100	dbj|AP000776.5| Homo sapiens genomic DNA, chromosome 11 clone:RP...	40	8.9
101	dbj|AP001838.4| Homo sapiens genomic DNA, chromosome 11q clone:R...	40	8.9
102	gb|AC139322.4| Mus musculus BAC clone RP24-397L22 from 9, comple...	40	8.9
103	gb|AC149201.2| Macaca mulatta Try4 (try4) gene, complete cds; tr...	40	8.9
104	emb|AL161871.6|CNS01RHN Human chromosome 14 DNA sequence BAC R-6...	40	8.9

---

>gb|L48286.1|BLYSRP543R Hordeum vulgare Srp54-2 mRNA, complete sequence; and signal
            recognition particle 54 kDa subunit (Srp 54-3) mRNA,
            complete cds
          Length = 1707

 Score = 1211 bits (611), Expect = 0.0
 Identities = 644/650 (99%), Gaps = 4/650 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgggcgccatatgcaggnaggctgcactcttcgnggnagnatgcgccaagttgctgaagc 60
            ||||||||||||||||| ||||||||||||||| || || ||||||||||||||||||||
Sbjct: 593  tgggcgccatatgcagg-aggctgcactcttcgagg-ag-atgcgccaagttgctgaagc 649

                                                                        
Query: 61   aacgaaaccagnacctggtgatatttgtgatggatggcagcattggtcaggctgcctttg 120
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650  aacgaaaccag-acctggtgatatttgtgatggatggcagcattggtcaggctgcctttg 708

                                                                        
Query: 121  atcaggcacaggcattcaaacagagtgcttccgttggtgctgtgattgtcacgaaattgg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709  atcaggcacaggcattcaaacagagtgcttccgttggtgctgtgattgtcacgaaattgg 768

                                                                        
Query: 181  atggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtga 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769  atggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtga 828

                                                                        
Query: 241  tattcattggaactggagaacacattgatgattttgacgtttttaacgtggaaccattcg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829  tattcattggaactggagaacacattgatgattttgacgtttttaacgtggaaccattcg 888

                                                                        
Query: 301  tcgcccgtctgctaggtagaggagacttgcctggcttaatcgacaagatggagagtattg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889  tcgcccgtctgctaggtagaggagacttgcctggcttaatcgacaagatggagagtattg 948

                                                                        
Query: 361  tgcctgctgatcaacaatctgagcttgtggcaaagctgtctgaaggagccttcactctca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949  tgcctgctgatcaacaatctgagcttgtggcaaagctgtctgaaggagccttcactctca 1008

                                                                        
Query: 421  gacttctgtatgagcaattccagaatcttctgaaaatgggaccaatgagccagatcttct 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 gacttctgtatgagcaattccagaatcttctgaaaatgggaccaatgagccagatcttct 1068

                                                                        
Query: 481  ccatgctgcctgggtttagctcggagttgatgccaaaaggacaggagaaacaaagcaaag 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 ccatgctgcctgggtttagctcggagttgatgccaaaaggacaggagaaacaaagcaaag 1128

                                                                        
Query: 541  aaaagttcaagcggtacatgacaattatggactccatgacacctgcagagctcgacagca 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 aaaagttcaagcggtacatgacaattatggactccatgacacctgcagagctcgacagca 1188

                                                              
Query: 601  cgaacccgaagctgatgaccgagtcgcgaaccatccgggtcgctcgaggg 650
            |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1189 cgaacccgaagctgatgaccgagtcgcgaatcatccgggtcgctcgaggg 1238

---

>gb|L48284.1|BLYSRP541R Hordeum vulgare signal recognition particle 54 kDa subunit (Srp54-1)
            mRNA, complete cds
          Length = 1732

 Score =  684 bits (345), Expect = 0.0
 Identities = 573/646 (88%), Gaps = 4/646 (0%)
 Strand = Plus / Plus

                                                                        
Query: 5    cgccatatgcaggnaggctgcactcttcgnggnagnatgcgccaagttgctgaagcaacg 64
            ||||||| ||||| ||||||||||||| | || |  ||||| |||||||| |||||||||
Sbjct: 656  cgccataagcagg-aggctgcactctttgaggaa--atgcgtcaagttgccgaagcaacg 712

                                                                        
Query: 65   aaaccagnacctggtgatatttgtgatggatggcagcattggtcaggctgcctttgatca 124
            ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 713  aaaccag-acctggtgatatttgtgatggatggcagcattggtcaggctgcatttgatca 771

                                                                        
Query: 125  ggcacaggcattcaaacagagtgcttccgttggtgctgtgattgtcacgaaattggatgg 184
            |||||||||||| ||||| |||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 772  ggcacaggcatttaaacaaagtgcttctgttggtgctgtgattattacgaaattggatgg 831

                                                                        
Query: 185  tcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgatatt 244
            |||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 832  tcatgcaaaaggaggcggtgcactgagcgcggttgcagctacaaaaagcccagtgatatt 891

                                                                        
Query: 245  cattggaactggagaacacattgatgattttgacgtttttaacgtggaaccattcgtcgc 304
             ||||||||||||||||| |||||||| |||||  ||||| | ||| | ||||| |||  
Sbjct: 892  tattggaactggagaacatattgatgaatttgagatttttgatgtgaagccatttgtcag 951

                                                                        
Query: 305  ccgtctgctaggtagaggagacttgcctggcttaatcgacaagatggagagtattgtgcc 364
            ||| ||||||||||  || |||||| |||||||||| ||||||||  ||  | || ||||
Sbjct: 952  ccggctgctaggtatgggtgacttgtctggcttaatggacaagatccaggatgttatgcc 1011

                                                                        
Query: 365  tgctgatcaacaatctgagcttgtggcaaagctgtctgaaggagccttcactctcagact 424
            ||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct: 1012 tgctgatcaacaacctgagcttctggcaaagctggctgaaggaaccttcactctcagact 1071

                                                                        
Query: 425  tctgtatgagcaattccagaatcttctgaaaatgggaccaatgagccagatcttctccat 484
            ||||||||||||||| |||||||||||||||||||| |||||  ||||| | ||||||||
Sbjct: 1072 tctgtatgagcaatttcagaatcttctgaaaatgggtccaattggccaggtattctccat 1131

                                                                        
Query: 485  gctgcctgggtttagctcggagttgatgccaaaaggacaggagaaacaaagcaaagaaaa 544
            | ||||||| ||||| || |||||||||||||||||||| |||||| || || ||| |||
Sbjct: 1132 gttgcctggatttagttcagagttgatgccaaaaggacacgagaaagaaggccaagcaaa 1191

                                                                        
Query: 545  gttcaagcggtacatgacaattatggactccatgacacctgcagagctcgacagcacgaa 604
            | | |||||||||||||| || ||||||||||||||| ||||||||||||||||||| ||
Sbjct: 1192 gattaagcggtacatgacgatcatggactccatgacagctgcagagctcgacagcacaaa 1251

                                                          
Query: 605  cccgaagctgatgaccgagtcgcgaaccatccgggtcgctcgaggg 650
            ||||||||||||||| ||||| |||| ||||||| |||||||||||
Sbjct: 1252 cccgaagctgatgacagagtctcgaatcatccggatcgctcgaggg 1297

---

>gb|L48285.1|BLYSRP542R Hordeum vulgare signal recognition particle 54 kDa subunit (Srp54-2)
            mRNA, complete cds
          Length = 1856

 Score =  684 bits (345), Expect = 0.0
 Identities = 573/646 (88%), Gaps = 4/646 (0%)
 Strand = Plus / Plus

                                                                        
Query: 5    cgccatatgcaggnaggctgcactcttcgnggnagnatgcgccaagttgctgaagcaacg 64
            ||||||| ||||| ||||||||||||| | || |  ||||| |||||||| |||||||||
Sbjct: 722  cgccataagcagg-aggctgcactctttgaggaa--atgcgtcaagttgccgaagcaacg 778

                                                                        
Query: 65   aaaccagnacctggtgatatttgtgatggatggcagcattggtcaggctgcctttgatca 124
            ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 779  aaaccag-acctggtgatatttgtgatggatggcagcattggtcaggctgcatttgatca 837

                                                                        
Query: 125  ggcacaggcattcaaacagagtgcttccgttggtgctgtgattgtcacgaaattggatgg 184
            |||||||||||| ||||| |||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 838  ggcacaggcatttaaacaaagtgcttctgttggtgctgtgattattacgaaattggatgg 897

                                                                        
Query: 185  tcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgatatt 244
            |||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 898  tcatgcaaaaggaggcggtgcactgagcgcggttgcagctacaaaaagcccagtgatatt 957

                                                                        
Query: 245  cattggaactggagaacacattgatgattttgacgtttttaacgtggaaccattcgtcgc 304
             ||||||||||||||||| |||||||| |||||  ||||| | ||| | ||||| |||  
Sbjct: 958  tattggaactggagaacatattgatgaatttgagatttttgatgtgaagccatttgtcag 1017

                                                                        
Query: 305  ccgtctgctaggtagaggagacttgcctggcttaatcgacaagatggagagtattgtgcc 364
            ||| ||||||||||  || |||||| |||||||||| ||||||||  ||  | || ||||
Sbjct: 1018 ccggctgctaggtatgggtgacttgtctggcttaatggacaagatccaggatgttatgcc 1077

                                                                        
Query: 365  tgctgatcaacaatctgagcttgtggcaaagctgtctgaaggagccttcactctcagact 424
            ||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct: 1078 tgctgatcaacaacctgagcttctggcaaagctggctgaaggaaccttcactctcagact 1137

                                                                        
Query: 425  tctgtatgagcaattccagaatcttctgaaaatgggaccaatgagccagatcttctccat 484
            ||||||||||||||| |||||||||||||||||||| |||||  ||||| | ||||||||
Sbjct: 1138 tctgtatgagcaatttcagaatcttctgaaaatgggtccaattggccaggtattctccat 1197

                                                                        
Query: 485  gctgcctgggtttagctcggagttgatgccaaaaggacaggagaaacaaagcaaagaaaa 544
            | ||||||| ||||| || |||||||||||||||||||| |||||| || || ||| |||
Sbjct: 1198 gttgcctggatttagttcagagttgatgccaaaaggacacgagaaagaaggccaagcaaa 1257

                                                                        
Query: 545  gttcaagcggtacatgacaattatggactccatgacacctgcagagctcgacagcacgaa 604
            | | |||||||||||||| || ||||||||||||||| ||||||||||||||||||| ||
Sbjct: 1258 gattaagcggtacatgacgatcatggactccatgacagctgcagagctcgacagcacaaa 1317

                                                          
Query: 605  cccgaagctgatgaccgagtcgcgaaccatccgggtcgctcgaggg 650
            ||||||||||||||| ||||| |||| ||||||| |||||||||||
Sbjct: 1318 cccgaagctgatgacagagtctcgaatcatccggatcgctcgaggg 1363

---

>ref|XM_475677.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1452

 Score =  301 bits (152), Expect = 2e-78
 Identities = 492/601 (81%), Gaps = 5/601 (0%)
 Strand = Plus / Plus

                                                                        
Query: 19   aggctgcactcttcgnggnagnatgcgccaagttgctgaagcaacgaaaccagnacctgg 78
            |||||||||||||||  | |  ||||| |||||||| |||||||||||||| | |||| |
Sbjct: 593  aggctgcactcttcgaagaa--atgcgtcaagttgcagaagcaacgaaacctg-accttg 649

                                                                        
Query: 79   tgatatttgtgatggatggcagcattggtcaggctgcctttgatcaggcacaggcattca 138
            ||||||| ||||||||||| |||||||||||||| || ||||||||||| || ||||| |
Sbjct: 650  tgatattcgtgatggatggtagcattggtcaggcagcgtttgatcaggcgcaagcattta 709

                                                                        
Query: 139  aacagagtgcttccgttggtgctgtgattgtcacgaaattggatggtcatgcgaagggag 198
            ||||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||
Sbjct: 710  aacagagtgcttctgttggtgctgtgattgttacgaaattggatggtcatgccaaaggag 769

                                                                        
Query: 199  gcggtgcactgagcgcggttgcagctacgaaaagcccggtgatattcattggaactggag 258
            |||||||||| ||||||||||||||||| || ||||| ||  |||| |||||||||||||
Sbjct: 770  gcggtgcacttagcgcggttgcagctacaaagagccctgttgtatttattggaactggag 829

                                                                        
Query: 259  aacacattgatgattttgacgtttttaacgtggaaccattcgtcgcccgtctgctaggta 318
            |||||||  | |||||||| |||||  | ||| ||||||| ||    |||||| |||| |
Sbjct: 830  aacacatgcaggattttgaggttttcgatgtgaaaccatttgttagtcgtctgttaggaa 889

                                                                        
Query: 319  gaggagacttgcctggcttaatcgacaagatggagagtattgtgcctgctgatcaacaat 378
              ||||||||| |||||||| |  |||||||  |   |  | ||||||||||||||||| 
Sbjct: 890  tgggagacttgtctggcttagtgaacaagatcaaagatgctatgcctgctgatcaacaac 949

                                                                        
Query: 379  ctgagcttgtggcaaag-ctgtctgaaggagccttcactctcagacttctgtatgagcaa 437
            |||||||| | ||| || |||   |||||| |||| ||||||||| |  | || ||||  
Sbjct: 950  ctgagcttat-gcagagactgatagaaggaacctttactctcagagtattctacgagctg 1008

                                                                        
Query: 438  ttccagaatcttctgaaaatgggaccaatgagccagatcttctccatgctgcctgggttt 497
            |||||||||||||| || ||||| || ||  | ||| | || || ||| | ||||| |||
Sbjct: 1009 ttccagaatcttcttaacatgggtcctattggacaggttttatctatgatacctggattt 1068

                                                                        
Query: 498  agctcggagttgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtac 557
            || || ||  |||||||||||||||| || ||  ||||| ||| |||| | |||||||||
Sbjct: 1069 aggtctgaactgatgccaaaaggacatgacaaggaaagccaagcaaagattaagcggtac 1128

                                                                        
Query: 558  atgacaattatggactccatgacacctgcagagctcgacagcacgaacccgaagctgatg 617
            ||||| |||||||| || ||||||  ||||||||| || ||||| ||||| |||||||||
Sbjct: 1129 atgactattatggattctatgacaaatgcagagcttgatagcacaaacccaaagctgatg 1188

             
Query: 618  a 618
            |
Sbjct: 1189 a 1189

---

>dbj|AK068958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001K24, full
            insert sequence
          Length = 2000

 Score =  301 bits (152), Expect = 2e-78
 Identities = 492/601 (81%), Gaps = 5/601 (0%)
 Strand = Plus / Plus

                                                                        
Query: 19   aggctgcactcttcgnggnagnatgcgccaagttgctgaagcaacgaaaccagnacctgg 78
            |||||||||||||||  | |  ||||| |||||||| |||||||||||||| | |||| |
Sbjct: 806  aggctgcactcttcgaagaa--atgcgtcaagttgcagaagcaacgaaacctg-accttg 862

                                                                        
Query: 79   tgatatttgtgatggatggcagcattggtcaggctgcctttgatcaggcacaggcattca 138
            ||||||| ||||||||||| |||||||||||||| || ||||||||||| || ||||| |
Sbjct: 863  tgatattcgtgatggatggtagcattggtcaggcagcgtttgatcaggcgcaagcattta 922

                                                                        
Query: 139  aacagagtgcttccgttggtgctgtgattgtcacgaaattggatggtcatgcgaagggag 198
            ||||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||
Sbjct: 923  aacagagtgcttctgttggtgctgtgattgttacgaaattggatggtcatgccaaaggag 982

                                                                        
Query: 199  gcggtgcactgagcgcggttgcagctacgaaaagcccggtgatattcattggaactggag 258
            |||||||||| ||||||||||||||||| || ||||| ||  |||| |||||||||||||
Sbjct: 983  gcggtgcacttagcgcggttgcagctacaaagagccctgttgtatttattggaactggag 1042

                                                                        
Query: 259  aacacattgatgattttgacgtttttaacgtggaaccattcgtcgcccgtctgctaggta 318
            |||||||  | |||||||| |||||  | ||| ||||||| ||    |||||| |||| |
Sbjct: 1043 aacacatgcaggattttgaggttttcgatgtgaaaccatttgttagtcgtctgttaggaa 1102

                                                                        
Query: 319  gaggagacttgcctggcttaatcgacaagatggagagtattgtgcctgctgatcaacaat 378
              ||||||||| |||||||| |  |||||||  |   |  | ||||||||||||||||| 
Sbjct: 1103 tgggagacttgtctggcttagtgaacaagatcaaagatgctatgcctgctgatcaacaac 1162

                                                                        
Query: 379  ctgagcttgtggcaaag-ctgtctgaaggagccttcactctcagacttctgtatgagcaa 437
            |||||||| | ||| || |||   |||||| |||| ||||||||| |  | || ||||  
Sbjct: 1163 ctgagcttat-gcagagactgatagaaggaacctttactctcagagtattctacgagctg 1221

                                                                        
Query: 438  ttccagaatcttctgaaaatgggaccaatgagccagatcttctccatgctgcctgggttt 497
            |||||||||||||| || ||||| || ||  | ||| | || || ||| | ||||| |||
Sbjct: 1222 ttccagaatcttcttaacatgggtcctattggacaggttttatctatgatacctggattt 1281

                                                                        
Query: 498  agctcggagttgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtac 557
            || || ||  |||||||||||||||| || ||  ||||| ||| |||| | |||||||||
Sbjct: 1282 aggtctgaactgatgccaaaaggacatgacaaggaaagccaagcaaagattaagcggtac 1341

                                                                        
Query: 558  atgacaattatggactccatgacacctgcagagctcgacagcacgaacccgaagctgatg 617
            ||||| |||||||| || ||||||  ||||||||| || ||||| ||||| |||||||||
Sbjct: 1342 atgactattatggattctatgacaaatgcagagcttgatagcacaaacccaaagctgatg 1401

             
Query: 618  a 618
            |
Sbjct: 1402 a 1402

---

>dbj|AB115419.1| Oryza sativa (japonica cultivar-group) srp54-2 mRNA for signal
            recognition particle 54kDa subunit, complete cds
          Length = 1676

 Score =  301 bits (152), Expect = 2e-78
 Identities = 492/601 (81%), Gaps = 5/601 (0%)
 Strand = Plus / Plus

                                                                        
Query: 19   aggctgcactcttcgnggnagnatgcgccaagttgctgaagcaacgaaaccagnacctgg 78
            |||||||||||||||  | |  ||||| |||||||| |||||||||||||| | |||| |
Sbjct: 708  aggctgcactcttcgaagaa--atgcgtcaagttgcagaagcaacgaaacctg-accttg 764

                                                                        
Query: 79   tgatatttgtgatggatggcagcattggtcaggctgcctttgatcaggcacaggcattca 138
            ||||||| ||||||||||| |||||||||||||| || ||||||||||| || ||||| |
Sbjct: 765  tgatattcgtgatggatggtagcattggtcaggcagcgtttgatcaggcgcaagcattta 824

                                                                        
Query: 139  aacagagtgcttccgttggtgctgtgattgtcacgaaattggatggtcatgcgaagggag 198
            ||||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||
Sbjct: 825  aacagagtgcttctgttggtgctgtgattgttacgaaattggatggtcatgccaaaggag 884

                                                                        
Query: 199  gcggtgcactgagcgcggttgcagctacgaaaagcccggtgatattcattggaactggag 258
            |||||||||| ||||||||||||||||| || ||||| ||  |||| |||||||||||||
Sbjct: 885  gcggtgcacttagcgcggttgcagctacaaagagccctgttgtatttattggaactggag 944

                                                                        
Query: 259  aacacattgatgattttgacgtttttaacgtggaaccattcgtcgcccgtctgctaggta 318
            |||||||  | |||||||| |||||  | ||| ||||||| ||    |||||| |||| |
Sbjct: 945  aacacatgcaggattttgaggttttcgatgtgaaaccatttgttagtcgtctgttaggaa 1004

                                                                        
Query: 319  gaggagacttgcctggcttaatcgacaagatggagagtattgtgcctgctgatcaacaat 378
              ||||||||| |||||||| |  |||||||  |   |  | ||||||||||||||||| 
Sbjct: 1005 tgggagacttgtctggcttagtgaacaagatcaaagatgctatgcctgctgatcaacaac 1064

                                                                        
Query: 379  ctgagcttgtggcaaag-ctgtctgaaggagccttcactctcagacttctgtatgagcaa 437
            |||||||| | ||| || |||   |||||| |||| ||||||||| |  | || ||||  
Sbjct: 1065 ctgagcttat-gcagagactgatagaaggaacctttactctcagagtattctacgagctg 1123

                                                                        
Query: 438  ttccagaatcttctgaaaatgggaccaatgagccagatcttctccatgctgcctgggttt 497
            |||||||||||||| || ||||| || ||  | ||| | || || ||| | ||||| |||
Sbjct: 1124 ttccagaatcttcttaacatgggtcctattggacaggttttatctatgatacctggattt 1183

                                                                        
Query: 498  agctcggagttgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtac 557
            || || ||  |||||||||||||||| || ||  ||||| ||| |||| | |||||||||
Sbjct: 1184 aggtctgaactgatgccaaaaggacatgacaaggaaagccaagcaaagattaagcggtac 1243

                                                                        
Query: 558  atgacaattatggactccatgacacctgcagagctcgacagcacgaacccgaagctgatg 617
            ||||| |||||||| || ||||||  ||||||||| || ||||| ||||| |||||||||
Sbjct: 1244 atgactattatggattctatgacaaatgcagagcttgatagcacaaacccaaagctgatg 1303

             
Query: 618  a 618
            |
Sbjct: 1304 a 1304

---

>ref|NM_191436.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1491

 Score =  210 bits (106), Expect = 4e-51
 Identities = 221/258 (85%), Gaps = 1/258 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
           |||||||||||| | ||||| |||||||||| | ||||| ||||||||||||||  | ||
Sbjct: 613 atgcgccaagtttcagaagcgacgaaaccag-atctggtaatatttgtgatggacagtag 671

                                                                       
Query: 101 cattggtcaggctgcctttgatcaggcacaggcattcaaacagagtgcttccgttggtgc 160
            || ||||||||||| |||||||||||||| ||||| || || |||| ||| ||||||||
Sbjct: 672 tatcggtcaggctgcatttgatcaggcacaagcatttaagcaaagtgtttctgttggtgc 731

                                                                       
Query: 161 tgtgattgtcacgaaattggatggtcatgcgaagggaggcggtgcactgagcgcggttgc 220
           |||||||||||| ||| ||||||| |||||||| ||||| || ||||| |||||||||||
Sbjct: 732 tgtgattgtcactaaaatggatggccatgcgaaaggaggtggcgcacttagcgcggttgc 791

                                                                       
Query: 221 agctacgaaaagcccggtgatattcattggaactggagaacacattgatgattttgacgt 280
           ||| || ||||| || |||||||| |||||||| ||||||||||| ||||| ||||| ||
Sbjct: 792 agcaacaaaaagtccagtgatatttattggaacaggagaacacatcgatgagtttgaagt 851

                             
Query: 281 ttttaacgtggaaccatt 298
           |||| | ||| |||||||
Sbjct: 852 ttttgatgtgaaaccatt 869



 Score =  133 bits (67), Expect = 8e-28
 Identities = 193/235 (82%)
 Strand = Plus / Plus

                                                                        
Query: 367  ctgatcaacaatctgagcttgtggcaaagctgtctgaaggagccttcactctcagacttc 426
            ||||||||||| |||||||| ||   ||||||||||||||| |||||||||| |||||| 
Sbjct: 938  ctgatcaacaacctgagcttttgcagaagctgtctgaaggaaccttcactctgagactta 997

                                                                        
Query: 427  tgtatgagcaattccagaatcttctgaaaatgggaccaatgagccagatcttctccatgc 486
            |||||||||| ||||||||  |  |||||||||| || ||  ||||| | ||||| ||| 
Sbjct: 998  tgtatgagcagttccagaacatcttgaaaatgggtcctattggccaggttttctcaatgt 1057

                                                                        
Query: 487  tgcctgggtttagctcggagttgatgccaaaaggacaggagaaacaaagcaaagaaaagt 546
            ||||||| ||||| || || ||||||||||| ||||| |||||  ||||| |||  ||| 
Sbjct: 1058 tgcctggatttagttctgaattgatgccaaagggacatgagaaggaaagccaagctaaga 1117

                                                                   
Query: 547  tcaagcggtacatgacaattatggactccatgacacctgcagagctcgacagcac 601
            | || ||||||||||| || ||||| |||||||||  || |||||| ||||||||
Sbjct: 1118 ttaaacggtacatgacgatgatggattccatgacagatggagagcttgacagcac 1172

---

>dbj|AK120871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026D19, full
            insert sequence
          Length = 2038

 Score =  210 bits (106), Expect = 4e-51
 Identities = 221/258 (85%), Gaps = 1/258 (0%)
 Strand = Plus / Plus

                                                                        
Query: 41   atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
            |||||||||||| | ||||| |||||||||| | ||||| ||||||||||||||  | ||
Sbjct: 912  atgcgccaagtttcagaagcgacgaaaccag-atctggtaatatttgtgatggacagtag 970

                                                                        
Query: 101  cattggtcaggctgcctttgatcaggcacaggcattcaaacagagtgcttccgttggtgc 160
             || ||||||||||| |||||||||||||| ||||| || || |||| ||| ||||||||
Sbjct: 971  tatcggtcaggctgcatttgatcaggcacaagcatttaagcaaagtgtttctgttggtgc 1030

                                                                        
Query: 161  tgtgattgtcacgaaattggatggtcatgcgaagggaggcggtgcactgagcgcggttgc 220
            |||||||||||| ||| ||||||| |||||||| ||||| || ||||| |||||||||||
Sbjct: 1031 tgtgattgtcactaaaatggatggccatgcgaaaggaggtggcgcacttagcgcggttgc 1090

                                                                        
Query: 221  agctacgaaaagcccggtgatattcattggaactggagaacacattgatgattttgacgt 280
            ||| || ||||| || |||||||| |||||||| ||||||||||| ||||| ||||| ||
Sbjct: 1091 agcaacaaaaagtccagtgatatttattggaacaggagaacacatcgatgagtttgaagt 1150

                              
Query: 281  ttttaacgtggaaccatt 298
            |||| | ||| |||||||
Sbjct: 1151 ttttgatgtgaaaccatt 1168



 Score =  133 bits (67), Expect = 8e-28
 Identities = 193/235 (82%)
 Strand = Plus / Plus

                                                                        
Query: 367  ctgatcaacaatctgagcttgtggcaaagctgtctgaaggagccttcactctcagacttc 426
            ||||||||||| |||||||| ||   ||||||||||||||| |||||||||| |||||| 
Sbjct: 1237 ctgatcaacaacctgagcttttgcagaagctgtctgaaggaaccttcactctgagactta 1296

                                                                        
Query: 427  tgtatgagcaattccagaatcttctgaaaatgggaccaatgagccagatcttctccatgc 486
            |||||||||| ||||||||  |  |||||||||| || ||  ||||| | ||||| ||| 
Sbjct: 1297 tgtatgagcagttccagaacatcttgaaaatgggtcctattggccaggttttctcaatgt 1356

                                                                        
Query: 487  tgcctgggtttagctcggagttgatgccaaaaggacaggagaaacaaagcaaagaaaagt 546
            ||||||| ||||| || || ||||||||||| ||||| |||||  ||||| |||  ||| 
Sbjct: 1357 tgcctggatttagttctgaattgatgccaaagggacatgagaaggaaagccaagctaaga 1416

                                                                   
Query: 547  tcaagcggtacatgacaattatggactccatgacacctgcagagctcgacagcac 601
            | || ||||||||||| || ||||| |||||||||  || |||||| ||||||||
Sbjct: 1417 ttaaacggtacatgacgatgatggattccatgacagatggagagcttgacagcac 1471

---

>dbj|AB114831.1| Oryza sativa (japonica cultivar-group) srp54-1 mRNA for signal
            recognition particle 54kDa subunit, complete cds
          Length = 1843

 Score =  210 bits (106), Expect = 4e-51
 Identities = 221/258 (85%), Gaps = 1/258 (0%)
 Strand = Plus / Plus

                                                                        
Query: 41   atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
            |||||||||||| | ||||| |||||||||| | ||||| ||||||||||||||  | ||
Sbjct: 770  atgcgccaagtttcagaagcgacgaaaccag-atctggtaatatttgtgatggacagtag 828

                                                                        
Query: 101  cattggtcaggctgcctttgatcaggcacaggcattcaaacagagtgcttccgttggtgc 160
             || ||||||||||| |||||||||||||| ||||| || || |||| ||| ||||||||
Sbjct: 829  tatcggtcaggctgcatttgatcaggcacaagcatttaagcaaagtgtttctgttggtgc 888

                                                                        
Query: 161  tgtgattgtcacgaaattggatggtcatgcgaagggaggcggtgcactgagcgcggttgc 220
            |||||||||||| ||| ||||||| |||||||| ||||| || ||||| |||||||||||
Sbjct: 889  tgtgattgtcactaaaatggatggccatgcgaaaggaggtggcgcacttagcgcggttgc 948

                                                                        
Query: 221  agctacgaaaagcccggtgatattcattggaactggagaacacattgatgattttgacgt 280
            ||| || ||||| || |||||||| |||||||| ||||||||||| ||||| ||||| ||
Sbjct: 949  agcaacaaaaagtccagtgatatttattggaacaggagaacacatcgatgagtttgaagt 1008

                              
Query: 281  ttttaacgtggaaccatt 298
            |||| | ||| |||||||
Sbjct: 1009 ttttgatgtgaaaccatt 1026



 Score =  133 bits (67), Expect = 8e-28
 Identities = 193/235 (82%)
 Strand = Plus / Plus

                                                                        
Query: 367  ctgatcaacaatctgagcttgtggcaaagctgtctgaaggagccttcactctcagacttc 426
            ||||||||||| |||||||| ||   ||||||||||||||| |||||||||| |||||| 
Sbjct: 1095 ctgatcaacaacctgagcttttgcagaagctgtctgaaggaaccttcactctgagactta 1154

                                                                        
Query: 427  tgtatgagcaattccagaatcttctgaaaatgggaccaatgagccagatcttctccatgc 486
            |||||||||| ||||||||  |  |||||||||| || ||  ||||| | ||||| ||| 
Sbjct: 1155 tgtatgagcagttccagaacatcttgaaaatgggtcctattggccaggttttctcaatgt 1214

                                                                        
Query: 487  tgcctgggtttagctcggagttgatgccaaaaggacaggagaaacaaagcaaagaaaagt 546
            ||||||| ||||| || || ||||||||||| ||||| |||||  ||||| |||  ||| 
Sbjct: 1215 tgcctggatttagttctgaattgatgccaaagggacatgagaaggaaagccaagctaaga 1274

                                                                   
Query: 547  tcaagcggtacatgacaattatggactccatgacacctgcagagctcgacagcac 601
            | || ||||||||||| || ||||| |||||||||  || |||||| ||||||||
Sbjct: 1275 ttaaacggtacatgacgatgatggattccatgacagatggagagcttgacagcac 1329

---

>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0108E17, complete sequence
          Length = 139829

 Score =  180 bits (91), Expect = 4e-42
 Identities = 130/143 (90%)
 Strand = Plus / Minus

                                                                         
Query: 73    acctggtgatatttgtgatggatggcagcattggtcaggctgcctttgatcaggcacagg 132
             |||| |||||||| ||||||||||| |||||||||||||| || ||||||||||| || |
Sbjct: 99840 accttgtgatattcgtgatggatggtagcattggtcaggcagcgtttgatcaggcgcaag 99781

                                                                         
Query: 133   cattcaaacagagtgcttccgttggtgctgtgattgtcacgaaattggatggtcatgcga 192
             |||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
Sbjct: 99780 catttaaacagagtgcttctgttggtgctgtgattgttacgaaattggatggtcatgcca 99721

                                    
Query: 193   agggaggcggtgcactgagcgcg 215
             | |||||||||||||| ||||||
Sbjct: 99720 aaggaggcggtgcacttagcgcg 99698



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                         
Query: 508   tgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtacatgacaatta 567
             |||||||||||||||| || ||  ||||| ||| |||| | |||||||||||||| ||||
Sbjct: 99030 tgatgccaaaaggacatgacaaggaaagccaagcaaagattaagcggtacatgactatta 98971

                           
Query: 568   tggactccatgaca 581
             |||| || ||||||
Sbjct: 98970 tggattctatgaca 98957



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                         
Query: 215   ggttgcagctacgaaaagcccggtgatattcattggaactggagaacacattgatgattt 274
             |||||||||||| || ||||| ||  |||| ||||||||||||||||||||  | |||||
Sbjct: 99535 ggttgcagctacaaagagccctgttgtatttattggaactggagaacacatgcaggattt 99476

                      
Query: 275   tgacgtttt 283
             ||| |||||
Sbjct: 99475 tgaggtttt 99467



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 361   tgcctgctgatcaacaatctgagctt 386
             ||||||||||||||||| ||||||||
Sbjct: 99312 tgcctgctgatcaacaacctgagctt 99287

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  180 bits (91), Expect = 4e-42
 Identities = 130/143 (90%)
 Strand = Plus / Minus

                                                                            
Query: 73       acctggtgatatttgtgatggatggcagcattggtcaggctgcctttgatcaggcacagg 132
                |||| |||||||| ||||||||||| |||||||||||||| || ||||||||||| || |
Sbjct: 25030987 accttgtgatattcgtgatggatggtagcattggtcaggcagcgtttgatcaggcgcaag 25030928

                                                                            
Query: 133      cattcaaacagagtgcttccgttggtgctgtgattgtcacgaaattggatggtcatgcga 192
                |||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
Sbjct: 25030927 catttaaacagagtgcttctgttggtgctgtgattgttacgaaattggatggtcatgcca 25030868

                                       
Query: 193      agggaggcggtgcactgagcgcg 215
                | |||||||||||||| ||||||
Sbjct: 25030867 aaggaggcggtgcacttagcgcg 25030845



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                            
Query: 508      tgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtacatgacaatta 567
                |||||||||||||||| || ||  ||||| ||| |||| | |||||||||||||| ||||
Sbjct: 25030177 tgatgccaaaaggacatgacaaggaaagccaagcaaagattaagcggtacatgactatta 25030118

                              
Query: 568      tggactccatgaca 581
                |||| || ||||||
Sbjct: 25030117 tggattctatgaca 25030104



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                            
Query: 215      ggttgcagctacgaaaagcccggtgatattcattggaactggagaacacattgatgattt 274
                |||||||||||| || ||||| ||  |||| ||||||||||||||||||||  | |||||
Sbjct: 25030682 ggttgcagctacaaagagccctgttgtatttattggaactggagaacacatgcaggattt 25030623

                         
Query: 275      tgacgtttt 283
                ||| |||||
Sbjct: 25030622 tgaggtttt 25030614



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 361      tgcctgctgatcaacaatctgagctt 386
                ||||||||||||||||| ||||||||
Sbjct: 25030459 tgcctgctgatcaacaacctgagctt 25030434

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  121 bits (61), Expect = 3e-24
 Identities = 121/141 (85%)
 Strand = Plus / Plus

                                                                            
Query: 75       ctggtgatatttgtgatggatggcagcattggtcaggctgcctttgatcaggcacaggca 134
                ||||| ||||||||||||||  | || || ||||||||||| |||||||||||||| |||
Sbjct: 32647934 ctggtaatatttgtgatggacagtagtatcggtcaggctgcatttgatcaggcacaagca 32647993

                                                                            
Query: 135      ttcaaacagagtgcttccgttggtgctgtgattgtcacgaaattggatggtcatgcgaag 194
                || || || |||| ||| |||||||||||||||||||| ||| ||||||| |||||||| 
Sbjct: 32647994 tttaagcaaagtgtttctgttggtgctgtgattgtcactaaaatggatggccatgcgaaa 32648053

                                     
Query: 195      ggaggcggtgcactgagcgcg 215
                ||||| || ||||| ||||||
Sbjct: 32648054 ggaggtggcgcacttagcgcg 32648074



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                            
Query: 367      ctgatcaacaatctgagcttgtggcaaagctgtctgaaggagccttcactctcagacttc 426
                ||||||||||| |||||||| ||   ||||||||||||||| |||||||||| |||||| 
Sbjct: 32648781 ctgatcaacaacctgagcttttgcagaagctgtctgaaggaaccttcactctgagactta 32648840

                                   
Query: 427      tgtatgagcaattccagaa 445
                |||||||||| ||||||||
Sbjct: 32648841 tgtatgagcagttccagaa 32648859



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                            
Query: 215      ggttgcagctacgaaaagcccggtgatattcattggaactggagaacacattgatgattt 274
                ||||||||| || ||||| || |||||||| |||||||| ||||||||||| ||||| ||
Sbjct: 32648557 ggttgcagcaacaaaaagtccagtgatatttattggaacaggagaacacatcgatgagtt 32648616

                                        
Query: 275      tgacgtttttaacgtggaaccatt 298
                ||| |||||| | ||| |||||||
Sbjct: 32648617 tgaagtttttgatgtgaaaccatt 32648640



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                            
Query: 477      ttctccatgctgcctgggtttagctcggagttgatgccaaaaggacaggagaaacaaagc 536
                ||||| ||| ||||||| ||||| || || ||||||||||| ||||| |||||  |||||
Sbjct: 32649031 ttctcaatgttgcctggatttagttctgaattgatgccaaagggacatgagaaggaaagc 32649090

                                                             
Query: 537      aaagaaaagttcaagcggtacatgacaattatggactccatgaca 581
                 |||  ||| | || ||||||||||| || ||||| |||||||||
Sbjct: 32649091 caagctaagattaaacggtacatgacgatgatggattccatgaca 32649135

---

>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0695H10
          Length = 136883

 Score =  121 bits (61), Expect = 3e-24
 Identities = 121/141 (85%)
 Strand = Plus / Plus

                                                                          
Query: 75     ctggtgatatttgtgatggatggcagcattggtcaggctgcctttgatcaggcacaggca 134
              ||||| ||||||||||||||  | || || ||||||||||| |||||||||||||| |||
Sbjct: 110729 ctggtaatatttgtgatggacagtagtatcggtcaggctgcatttgatcaggcacaagca 110788

                                                                          
Query: 135    ttcaaacagagtgcttccgttggtgctgtgattgtcacgaaattggatggtcatgcgaag 194
              || || || |||| ||| |||||||||||||||||||| ||| ||||||| |||||||| 
Sbjct: 110789 tttaagcaaagtgtttctgttggtgctgtgattgtcactaaaatggatggccatgcgaaa 110848

                                   
Query: 195    ggaggcggtgcactgagcgcg 215
              ||||| || ||||| ||||||
Sbjct: 110849 ggaggtggcgcacttagcgcg 110869



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                          
Query: 367    ctgatcaacaatctgagcttgtggcaaagctgtctgaaggagccttcactctcagacttc 426
              ||||||||||| |||||||| ||   ||||||||||||||| |||||||||| |||||| 
Sbjct: 111576 ctgatcaacaacctgagcttttgcagaagctgtctgaaggaaccttcactctgagactta 111635

                                 
Query: 427    tgtatgagcaattccagaa 445
              |||||||||| ||||||||
Sbjct: 111636 tgtatgagcagttccagaa 111654



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                          
Query: 215    ggttgcagctacgaaaagcccggtgatattcattggaactggagaacacattgatgattt 274
              ||||||||| || ||||| || |||||||| |||||||| ||||||||||| ||||| ||
Sbjct: 111352 ggttgcagcaacaaaaagtccagtgatatttattggaacaggagaacacatcgatgagtt 111411

                                      
Query: 275    tgacgtttttaacgtggaaccatt 298
              ||| |||||| | ||| |||||||
Sbjct: 111412 tgaagtttttgatgtgaaaccatt 111435



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                          
Query: 477    ttctccatgctgcctgggtttagctcggagttgatgccaaaaggacaggagaaacaaagc 536
              ||||| ||| ||||||| ||||| || || ||||||||||| ||||| |||||  |||||
Sbjct: 111826 ttctcaatgttgcctggatttagttctgaattgatgccaaagggacatgagaaggaaagc 111885

                                                           
Query: 537    aaagaaaagttcaagcggtacatgacaattatggactccatgaca 581
               |||  ||| | || ||||||||||| || ||||| |||||||||
Sbjct: 111886 caagctaagattaaacggtacatgacgatgatggattccatgaca 111930

---

>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0490D09
          Length = 154430

 Score =  121 bits (61), Expect = 3e-24
 Identities = 121/141 (85%)
 Strand = Plus / Plus

                                                                         
Query: 75    ctggtgatatttgtgatggatggcagcattggtcaggctgcctttgatcaggcacaggca 134
             ||||| ||||||||||||||  | || || ||||||||||| |||||||||||||| |||
Sbjct: 10729 ctggtaatatttgtgatggacagtagtatcggtcaggctgcatttgatcaggcacaagca 10788

                                                                         
Query: 135   ttcaaacagagtgcttccgttggtgctgtgattgtcacgaaattggatggtcatgcgaag 194
             || || || |||| ||| |||||||||||||||||||| ||| ||||||| |||||||| 
Sbjct: 10789 tttaagcaaagtgtttctgttggtgctgtgattgtcactaaaatggatggccatgcgaaa 10848

                                  
Query: 195   ggaggcggtgcactgagcgcg 215
             ||||| || ||||| ||||||
Sbjct: 10849 ggaggtggcgcacttagcgcg 10869



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                         
Query: 367   ctgatcaacaatctgagcttgtggcaaagctgtctgaaggagccttcactctcagacttc 426
             ||||||||||| |||||||| ||   ||||||||||||||| |||||||||| |||||| 
Sbjct: 11576 ctgatcaacaacctgagcttttgcagaagctgtctgaaggaaccttcactctgagactta 11635

                                
Query: 427   tgtatgagcaattccagaa 445
             |||||||||| ||||||||
Sbjct: 11636 tgtatgagcagttccagaa 11654



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                         
Query: 215   ggttgcagctacgaaaagcccggtgatattcattggaactggagaacacattgatgattt 274
             ||||||||| || ||||| || |||||||| |||||||| ||||||||||| ||||| ||
Sbjct: 11352 ggttgcagcaacaaaaagtccagtgatatttattggaacaggagaacacatcgatgagtt 11411

                                     
Query: 275   tgacgtttttaacgtggaaccatt 298
             ||| |||||| | ||| |||||||
Sbjct: 11412 tgaagtttttgatgtgaaaccatt 11435



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                         
Query: 477   ttctccatgctgcctgggtttagctcggagttgatgccaaaaggacaggagaaacaaagc 536
             ||||| ||| ||||||| ||||| || || ||||||||||| ||||| |||||  |||||
Sbjct: 11826 ttctcaatgttgcctggatttagttctgaattgatgccaaagggacatgagaaggaaagc 11885

                                                          
Query: 537   aaagaaaagttcaagcggtacatgacaattatggactccatgaca 581
              |||  ||| | || ||||||||||| || ||||| |||||||||
Sbjct: 11886 caagctaagattaaacggtacatgacgatgatggattccatgaca 11930

---

>emb|Z34527.1|LESSRPSPR L.esculentum (UC82-B) mRNA for 54-kD signal recognition particle
           (SRP) specific protein
          Length = 1861

 Score =  119 bits (60), Expect = 1e-23
 Identities = 199/244 (81%), Gaps = 1/244 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
           ||||| ||||||||||||||||||||||||| | || ||||| ||||| |||||| ||||
Sbjct: 700 atgcgacaagttgctgaagcaacgaaaccag-atcttgtgatttttgttatggatagcag 758

                                                                       
Query: 101 cattggtcaggctgcctttgatcaggcacaggcattcaaacagagtgcttccgttggtgc 160
            |||||||| |||||||||||||| || || ||||| || || |||| | | || || ||
Sbjct: 759 tattggtcaagctgcctttgatcaagctcaagcatttaagcaaagtgttgcagtaggagc 818

                                                                       
Query: 161 tgtgattgtcacgaaattggatggtcatgcgaagggaggcggtgcactgagcgcggttgc 220
           ||| ||||| || ||  ||||||||||||| || ||||| ||||| || || || |||||
Sbjct: 819 tgtaattgttactaagatggatggtcatgcaaaaggaggtggtgccctcagtgcagttgc 878

                                                                       
Query: 221 agctacgaaaagcccggtgatattcattggaactggagaacacattgatgattttgacgt 280
            || || ||||| || || || || ||||||||||| |||||||| || || ||||| ||
Sbjct: 879 tgcaacaaaaagtcccgtcatttttattggaactggtgaacacatggacgagtttgaagt 938

               
Query: 281 tttt 284
           ||||
Sbjct: 939 tttt 942



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 78/96 (81%)
 Strand = Plus / Plus

                                                                        
Query: 427  tgtatgagcaattccagaatcttctgaaaatgggaccaatgagccagatcttctccatgc 486
            ||||||||||||| |||||  | || |||||||| || ||  ||||| |||| |||||||
Sbjct: 1085 tgtatgagcaatttcagaacatacttaaaatgggccccattggccaggtcttttccatgc 1144

                                                
Query: 487  tgcctgggtttagctcggagttgatgccaaaaggac 522
            | || || || ||  | |||||||||||||||||||
Sbjct: 1145 ttccaggattcagtgcagagttgatgccaaaaggac 1180

---

>ref|NM_103783.1| Arabidopsis thaliana 7S RNA binding / GTP binding / RNA binding /
            mRNA binding / nucleoside-triphosphatase/ nucleotide
            binding AT1G48900 mRNA, complete cds
          Length = 1814

 Score =  115 bits (58), Expect = 2e-22
 Identities = 209/258 (81%), Gaps = 1/258 (0%)
 Strand = Plus / Plus

                                                                        
Query: 41   atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
            ||||| ||||||||||||||||||||||||| | || || |||||||| |||||| ||||
Sbjct: 749  atgcgtcaagttgctgaagcaacgaaaccag-atcttgttatatttgttatggatagcag 807

                                                                        
Query: 101  cattggtcaggctgcctttgatcaggcacaggcattcaaacagagtgcttccgttggtgc 160
             |||||||| ||||| |||||||| || || || || || ||||||| | | ||||| ||
Sbjct: 808  tattggtcaagctgcatttgatcaagctcaagcctttaagcagagtgttgctgttggagc 867

                                                                        
Query: 161  tgtgattgtcacgaaattggatggtcatgcgaagggaggcggtgcactgagcgcggttgc 220
            ||| ||| | || ||  |||| || ||||| ||||| || || || || ||||| |||||
Sbjct: 868  tgtaattattactaagatggacggccatgccaagggtggtggggctcttagcgctgttgc 927

                                                                        
Query: 221  agctacgaaaagcccggtgatattcattggaactggagaacacattgatgattttgacgt 280
            |||||||||||| || |||||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 928  agctacgaaaagtcctgtgatatttatcggaacaggagagcatatggatgagtttgaagt 987

                              
Query: 281  ttttaacgtggaaccatt 298
             ||| ||||  |||||||
Sbjct: 988  gtttgacgtcaaaccatt 1005



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                        
Query: 508  tgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtacatgacaatta 567
            ||||||| |||||||| |||||| ||||| | |  ||| | ||||||||||||||||| |
Sbjct: 1215 tgatgccgaaaggacatgagaaagaaagccaggcgaagataaagcggtacatgacaatga 1274

                          
Query: 568  tggactccatgaca 581
            |||| || ||||||
Sbjct: 1275 tggattctatgaca 1288

---

>gb|AF446864.1|AF446864 Arabidopsis thaliana At1g48900/F27K7_8 mRNA, complete cds
          Length = 1488

 Score =  115 bits (58), Expect = 2e-22
 Identities = 209/258 (81%), Gaps = 1/258 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
           ||||| ||||||||||||||||||||||||| | || || |||||||| |||||| ||||
Sbjct: 613 atgcgtcaagttgctgaagcaacgaaaccag-atcttgttatatttgttatggatagcag 671

                                                                       
Query: 101 cattggtcaggctgcctttgatcaggcacaggcattcaaacagagtgcttccgttggtgc 160
            |||||||| ||||| |||||||| || || || || || ||||||| | | ||||| ||
Sbjct: 672 tattggtcaagctgcatttgatcaagctcaagcctttaagcagagtgttgctgttggagc 731

                                                                       
Query: 161 tgtgattgtcacgaaattggatggtcatgcgaagggaggcggtgcactgagcgcggttgc 220
           ||| ||| | || ||  |||| || ||||| ||||| || || || || ||||| |||||
Sbjct: 732 tgtaattattactaagatggacggccatgccaagggtggtggggctcttagcgctgttgc 791

                                                                       
Query: 221 agctacgaaaagcccggtgatattcattggaactggagaacacattgatgattttgacgt 280
           |||||||||||| || |||||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 792 agctacgaaaagtcctgtgatatttatcggaacaggagagcatatggatgagtttgaagt 851

                             
Query: 281 ttttaacgtggaaccatt 298
            ||| ||||  |||||||
Sbjct: 852 gtttgacgtcaaaccatt 869



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                        
Query: 508  tgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtacatgacaatta 567
            ||||||| |||||||| |||||| ||||| | |  ||| | ||||||||||||||||| |
Sbjct: 1079 tgatgccgaaaggacatgagaaagaaagccaggcgaagataaagcggtacatgacaatga 1138

                          
Query: 568  tggactccatgaca 581
            |||| || ||||||
Sbjct: 1139 tggattctatgaca 1152

---

>gb|AY054273.1| Arabidopsis thaliana At1g48900/F27K7_8 mRNA, complete cds
          Length = 1747

 Score =  115 bits (58), Expect = 2e-22
 Identities = 209/258 (81%), Gaps = 1/258 (0%)
 Strand = Plus / Plus

                                                                        
Query: 41   atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
            ||||| ||||||||||||||||||||||||| | || || |||||||| |||||| ||||
Sbjct: 744  atgcgtcaagttgctgaagcaacgaaaccag-atcttgttatatttgttatggatagcag 802

                                                                        
Query: 101  cattggtcaggctgcctttgatcaggcacaggcattcaaacagagtgcttccgttggtgc 160
             |||||||| ||||| |||||||| || || || || || ||||||| | | ||||| ||
Sbjct: 803  tattggtcaagctgcatttgatcaagctcaagcctttaagcagagtgttgctgttggagc 862

                                                                        
Query: 161  tgtgattgtcacgaaattggatggtcatgcgaagggaggcggtgcactgagcgcggttgc 220
            ||| ||| | || ||  |||| || ||||| ||||| || || || || ||||| |||||
Sbjct: 863  tgtaattattactaagatggacggccatgccaagggtggtggggctcttagcgctgttgc 922

                                                                        
Query: 221  agctacgaaaagcccggtgatattcattggaactggagaacacattgatgattttgacgt 280
            |||||||||||| || |||||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 923  agctacgaaaagtcctgtgatatttatcggaacaggagagcatatggatgagtttgaagt 982

                              
Query: 281  ttttaacgtggaaccatt 298
             ||| ||||  |||||||
Sbjct: 983  gtttgacgtcaaaccatt 1000



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                        
Query: 508  tgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtacatgacaatta 567
            ||||||| |||||||| |||||| ||||| | |  ||| | ||||||||||||||||| |
Sbjct: 1210 tgatgccgaaaggacatgagaaagaaagccaggcgaagataaagcggtacatgacaatga 1269

                          
Query: 568  tggactccatgaca 581
            |||| || ||||||
Sbjct: 1270 tggattctatgaca 1283

---

>gb|AY052331.1| Arabidopsis thaliana At1g48900/F27K7_8 mRNA, complete cds
          Length = 1815

 Score =  115 bits (58), Expect = 2e-22
 Identities = 209/258 (81%), Gaps = 1/258 (0%)
 Strand = Plus / Plus

                                                                        
Query: 41   atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
            ||||| ||||||||||||||||||||||||| | || || |||||||| |||||| ||||
Sbjct: 749  atgcgtcaagttgctgaagcaacgaaaccag-atcttgttatatttgttatggatagcag 807

                                                                        
Query: 101  cattggtcaggctgcctttgatcaggcacaggcattcaaacagagtgcttccgttggtgc 160
             |||||||| ||||| |||||||| || || || || || ||||||| | | ||||| ||
Sbjct: 808  tattggtcaagctgcatttgatcaagctcaagcctttaagcagagtgttgctgttggagc 867

                                                                        
Query: 161  tgtgattgtcacgaaattggatggtcatgcgaagggaggcggtgcactgagcgcggttgc 220
            ||| ||| | || ||  |||| || ||||| ||||| || || || || ||||| |||||
Sbjct: 868  tgtaattattactaagatggacggccatgccaagggtggtggggctcttagcgctgttgc 927

                                                                        
Query: 221  agctacgaaaagcccggtgatattcattggaactggagaacacattgatgattttgacgt 280
            |||||||||||| || |||||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 928  agctacgaaaagtcctgtgatatttatcggaacaggagagcatatggatgagtttgaagt 987

                              
Query: 281  ttttaacgtggaaccatt 298
             ||| ||||  |||||||
Sbjct: 988  gtttgacgtcaaaccatt 1005



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                        
Query: 508  tgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtacatgacaatta 567
            ||||||| |||||||| |||||| ||||| | |  ||| | ||||||||||||||||| |
Sbjct: 1215 tgatgccgaaaggacatgagaaagaaagccaggcgaagataaagcggtacatgacaatga 1274

                          
Query: 568  tggactccatgaca 581
            |||| || ||||||
Sbjct: 1275 tggattctatgaca 1288

---

>gb|AY106300.1| Zea mays PCO070291 mRNA sequence
          Length = 794

 Score =  111 bits (56), Expect = 3e-21
 Identities = 182/224 (81%)
 Strand = Plus / Plus

                                                                       
Query: 396 ctgtctgaaggagccttcactctcagacttctgtatgagcaattccagaatcttctgaaa 455
           ||||||||||||  ||| | |||||| ||| |||||||||| |||||||| ||||| |||
Sbjct: 25  ctgtctgaaggaagctttagtctcaggcttatgtatgagcagttccagaaccttcttaaa 84

                                                                       
Query: 456 atgggaccaatgagccagatcttctccatgctgcctgggtttagctcggagttgatgcca 515
           ||||| || ||  ||||| ||||||| ||| |||| ||||||||| | ||  | ||||||
Sbjct: 85  atgggtcctattggccaggtcttctctatgttgccagggtttagcgctgaactaatgcca 144

                                                                       
Query: 516 aaaggacaggagaaacaaagcaaagaaaagttcaagcggtacatgacaattatggactcc 575
           |||||||| |||||  ||||| | |  ||| | ||||| ||||||||||| ||||| |||
Sbjct: 145 aaaggacatgagaaggaaagccaggctaagattaagcgctacatgacaatgatggattcc 204

                                                       
Query: 576 atgacacctgcagagctcgacagcacgaacccgaagctgatgac 619
           |||||   ||||||||| |||||||| || || ||| |||||||
Sbjct: 205 atgactgatgcagagcttgacagcacaaatcctaagttgatgac 248

---

>emb|BX813619.1|CNS0AEMN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB28ZD03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1614

 Score =  107 bits (54), Expect = 5e-20
 Identities = 208/258 (80%), Gaps = 1/258 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
           ||||| ||||||||||| ||||||||||||| | || || |||||||| |||||| ||||
Sbjct: 638 atgcgtcaagttgctgaggcaacgaaaccag-atcttgttatatttgttatggatagcag 696

                                                                       
Query: 101 cattggtcaggctgcctttgatcaggcacaggcattcaaacagagtgcttccgttggtgc 160
            |||||||| ||||| |||||||| || || || || || ||||||| | | ||||| ||
Sbjct: 697 tattggtcaagctgcatttgatcaagctcaagcctttaagcagagtgttgctgttggagc 756

                                                                       
Query: 161 tgtgattgtcacgaaattggatggtcatgcgaagggaggcggtgcactgagcgcggttgc 220
           ||| ||| | || ||  |||| || ||||| ||||| || || || || ||||| |||||
Sbjct: 757 tgtaattattactaagatggacggccatgccaagggtggtggggctcttagcgctgttgc 816

                                                                       
Query: 221 agctacgaaaagcccggtgatattcattggaactggagaacacattgatgattttgacgt 280
           |||||||||||| || |||||||| || ||||| ||||| || || ||||| ||||| ||
Sbjct: 817 agctacgaaaagtcctgtgatatttatcggaacaggagagcatatggatgagtttgaagt 876

                             
Query: 281 ttttaacgtggaaccatt 298
            ||| ||||  |||||||
Sbjct: 877 gtttgacgtcaaaccatt 894



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                        
Query: 508  tgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtacatgacaatta 567
            ||||||| |||||||| |||||| ||||| | |  ||| | ||||||||||||||||| |
Sbjct: 1104 tgatgccgaaaggacatgagaaagaaagccaggcgaagataaagcggtacatgacaatga 1163

                          
Query: 568  tggactccatgaca 581
            |||| || ||||||
Sbjct: 1164 tggattctatgaca 1177

---

>gb|BT017553.1| Zea mays clone EL01N0424E11.c mRNA sequence
          Length = 1037

 Score =  103 bits (52), Expect = 7e-19
 Identities = 166/204 (81%)
 Strand = Plus / Plus

                                                                       
Query: 416 tctcagacttctgtatgagcaattccagaatcttctgaaaatgggaccaatgagccagat 475
           |||||| ||| |||||||||| |||||||| ||||| |||||||| || ||  ||||| |
Sbjct: 188 tctcaggcttatgtatgagcagttccagaaccttcttaaaatgggtcctattggccaggt 247

                                                                       
Query: 476 cttctccatgctgcctgggtttagctcggagttgatgccaaaaggacaggagaaacaaag 535
           |||||| ||| |||| ||||||||| | ||  | |||||||||||||| |||||  ||||
Sbjct: 248 cttctctatgttgccagggtttagcgctgaactaatgccaaaaggacatgagaaggaaag 307

                                                                       
Query: 536 caaagaaaagttcaagcggtacatgacaattatggactccatgacacctgcagagctcga 595
           | | |  ||| | ||||| ||||||||||| ||||| ||||||||   ||||||||| ||
Sbjct: 308 ccaggctaagattaagcgctacatgacaatgatggattccatgactgatgcagagcttga 367

                                   
Query: 596 cagcacgaacccgaagctgatgac 619
           |||||| || || ||| |||||||
Sbjct: 368 cagcacaaatcctaagttgatgac 391



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                        
Query: 240 atattcattggaactggagaacacattgatgattttgacgttttt 284
           |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 12  atattcattggaactggagagcacattgatgattttgaagttttt 56

---

>gb|AC135414.31| Medicago truncatula clone mth2-8n20, complete sequence
          Length = 127018

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                          
Query: 84     tttgtgatggatggcagcattggtcaggctgcctttgatcaggcacaggcattcaaacag 143
              ||||| |||||| |||| |||||||||||||| ||||||||||| || ||||| ||||||
Sbjct: 103527 tttgtcatggatagcagtattggtcaggctgcttttgatcaggcccaagcatttaaacag 103468

                                                                          
Query: 144    agtgcttccgttggtgctgtgattgtcacgaaattggatggtcatgcgaagggaggcggt 203
              |||| | | ||||| ||||| ||| |||| ||| ||||||| ||||| ||||| || |||
Sbjct: 103467 agtgttgcagttggagctgtcattatcacaaaaatggatggccatgcaaagggtggtggt 103408

                   
Query: 204    gcact 208
              |||||
Sbjct: 103407 gcact 103403



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                           
Query: 240    atattcattggaactggagaacacattgatgattttgacgttttt 284
              |||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 103210 atattcattggaactggagaacacatggatgaatttgaagttttt 103166



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 549    aagcggtacatgacaattatggactccatgaca 581
              ||||| ||||||||||| |||||||| ||||||
Sbjct: 102530 aagcgttacatgacaatgatggactcaatgaca 102498

---

>gb|AC147009.5| Medicago truncatula clone mth2-139j3, complete sequence
          Length = 125303

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Plus

                                                                         
Query: 84    tttgtgatggatggcagcattggtcaggctgcctttgatcaggcacaggcattcaaacag 143
             ||||| |||||| |||| |||||||||||||| ||||||||||| || ||||| ||||||
Sbjct: 23492 tttgtcatggatagcagtattggtcaggctgcttttgatcaggcccaagcatttaaacag 23551

                                                                         
Query: 144   agtgcttccgttggtgctgtgattgtcacgaaattggatggtcatgcgaagggaggcggt 203
             |||| | | ||||| ||||| ||| |||| ||| ||||||| ||||| ||||| || |||
Sbjct: 23552 agtgttgcagttggagctgtcattatcacaaaaatggatggccatgcaaagggtggtggt 23611

                  
Query: 204   gcact 208
             |||||
Sbjct: 23612 gcact 23616



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                          
Query: 240   atattcattggaactggagaacacattgatgattttgacgttttt 284
             |||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 23809 atattcattggaactggagaacacatggatgaatttgaagttttt 23853



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 549   aagcggtacatgacaattatggactccatgaca 581
             ||||| ||||||||||| |||||||| ||||||
Sbjct: 24489 aagcgttacatgacaatgatggactcaatgaca 24521

---

>ref|NM_101400.2| Arabidopsis thaliana ATHSRP54A; 7S RNA binding / GTP binding / RNA
           binding / mRNA binding / nucleoside-triphosphatase/
           nucleotide binding AT1G15310 (ATHSRP54A) mRNA, complete
           cds
          Length = 1685

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 95/113 (84%)
 Strand = Plus / Plus

                                                                       
Query: 186 catgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgatattc 245
           ||||| |||||||| ||||| || ||||| ||||||||||| ||||| || |||||||||
Sbjct: 868 catgccaagggaggtggtgctcttagcgctgttgcagctacaaaaagtcctgtgatattc 927

                                                                
Query: 246 attggaactggagaacacattgatgattttgacgtttttaacgtggaaccatt 298
           |||||||| ||||| || || ||||| ||||| || ||| ||||  |||||||
Sbjct: 928 attggaacaggagagcatatggatgagtttgaagtgtttgacgttaaaccatt 980



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 70/81 (86%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
           ||||| |||||||||||||||||| |||||| | || || |||||||| |||||| ||||
Sbjct: 724 atgcgtcaagttgctgaagcaacggaaccag-atcttgttatatttgttatggatagcag 782

                                
Query: 101 cattggtcaggctgcctttga 121
            |||||||| ||||| |||||
Sbjct: 783 tattggtcaagctgcatttga 803

---

>dbj|AK221684.1| Arabidopsis thaliana mRNA for putative signal recognition particle
           54 kDa subunit, complete cds, clone: RAFL14-89-A07
          Length = 1630

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 95/113 (84%)
 Strand = Plus / Plus

                                                                       
Query: 186 catgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgatattc 245
           ||||| |||||||| ||||| || ||||| ||||||||||| ||||| || |||||||||
Sbjct: 783 catgccaagggaggtggtgctcttagcgctgttgcagctacaaaaagtcctgtgatattc 842

                                                                
Query: 246 attggaactggagaacacattgatgattttgacgtttttaacgtggaaccatt 298
           |||||||| ||||| || || ||||| ||||| || ||| ||||  |||||||
Sbjct: 843 attggaacaggagagcatatggatgagtttgaagtgtttgacgttaaaccatt 895



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 70/81 (86%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
           ||||| |||||||||||||||||| |||||| | || || |||||||| |||||| ||||
Sbjct: 639 atgcgtcaagttgctgaagcaacggaaccag-atcttgttatatttgttatggatagcag 697

                                
Query: 101 cattggtcaggctgcctttga 121
            |||||||| ||||| |||||
Sbjct: 698 tattggtcaagctgcatttga 718

---

>gb|AF344329.1| Arabidopsis thaliana clone C00252 (e) unknown protein (At1g15310)
           mRNA, complete cds
          Length = 1440

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 95/113 (84%)
 Strand = Plus / Plus

                                                                       
Query: 186 catgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgatattc 245
           ||||| |||||||| ||||| || ||||| ||||||||||| ||||| || |||||||||
Sbjct: 757 catgccaagggaggtggtgctcttagcgctgttgcagctacaaaaagtcctgtgatattc 816

                                                                
Query: 246 attggaactggagaacacattgatgattttgacgtttttaacgtggaaccatt 298
           |||||||| ||||| || || ||||| ||||| || ||| ||||  |||||||
Sbjct: 817 attggaacaggagagcatatggatgagtttgaagtgtttgacgttaaaccatt 869



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 70/81 (86%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
           ||||| |||||||||||||||||| |||||| | || || |||||||| |||||| ||||
Sbjct: 613 atgcgtcaagttgctgaagcaacggaaccag-atcttgttatatttgttatggatagcag 671

                                
Query: 101 cattggtcaggctgcctttga 121
            |||||||| ||||| |||||
Sbjct: 672 tattggtcaagctgcatttga 692

---

>gb|AY086187.1| Arabidopsis thaliana clone 22158 mRNA, complete sequence
          Length = 1648

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 95/113 (84%)
 Strand = Plus / Plus

                                                                       
Query: 186 catgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgatattc 245
           ||||| |||||||| ||||| || ||||| ||||||||||| ||||| || |||||||||
Sbjct: 868 catgccaagggaggtggtgctcttagcgctgttgcagctacaaaaagtcctgtgatattc 927

                                                                
Query: 246 attggaactggagaacacattgatgattttgacgtttttaacgtggaaccatt 298
           |||||||| ||||| || || ||||| ||||| || ||| ||||  |||||||
Sbjct: 928 attggaacaggagagcatatggatgagtttgaagtgtttgacgttaaaccatt 980



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 70/81 (86%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
           ||||| |||||||||||||||||| |||||| | || || |||||||| |||||| ||||
Sbjct: 724 atgcgtcaagttgctgaagcaacggaaccag-atcttgttatatttgttatggatagcag 782

                                
Query: 101 cattggtcaggctgcctttga 121
            |||||||| ||||| |||||
Sbjct: 783 tattggtcaagctgcatttga 803

---

>ref|NM_124327.1| Arabidopsis thaliana 7S RNA binding / GTP binding / RNA binding /
           mRNA binding AT5G49500 mRNA, complete cds
          Length = 1494

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 194/244 (79%), Gaps = 1/244 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  atgcgccaagttgctgaagcaacgaaaccagnacctggtgatatttgtgatggatggcag 100
           ||||| ||| || |||||||||||||||||| | || || |||||||| |||||| ||||
Sbjct: 619 atgcgtcaaatttctgaagcaacgaaaccag-atcttgttatatttgttatggatagcag 677

                                                                       
Query: 101 cattggtcaggctgcctttgatcaggcacaggcattcaaacagagtgcttccgttggtgc 160
            ||||||||  |||| ||||| || || |  ||||| ||||| | || | | || || ||
Sbjct: 678 tattggtcaaactgcgtttgaacaagctcgagcatttaaacaaactgttgctgtgggagc 737

                                                                       
Query: 161 tgtgattgtcacgaaattggatggtcatgcgaagggaggcggtgcactgagcgcggttgc 220
           ||| ||| | || ||  ||||||||||||| ||||| || ||  | || ||||| |||||
Sbjct: 738 tgtaattattactaagatggatggtcatgccaagggtggtgggactcttagcgctgttgc 797

                                                                       
Query: 221 agctacgaaaagcccggtgatattcattggaactggagaacacattgatgattttgacgt 280
           |||||| ||||| || || |||||||||||||| ||||| || || ||||| ||||| ||
Sbjct: 798 agctacaaaaagtcctgtcatattcattggaacaggagagcatatggatgagtttgaagt 857

               
Query: 281 tttt 284
           ||||
Sbjct: 858 tttt 861



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                        
Query: 508  tgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtacatgacaatta 567
            |||||||| | ||||| |||||| ||||| | |  ||| | ||||| ||||||||||| |
Sbjct: 1085 tgatgccagagggacatgagaaagaaagccaggcgaagataaagcgatacatgacaatga 1144

                         
Query: 568  tggactccatgac 580
            ||||||| |||||
Sbjct: 1145 tggactctatgac 1157

---

>ref|XM_775557.1| PREDICTED: Strongylocentrotus purpuratus similar to signal
           recognition particle 54 (LOC575138), mRNA
          Length = 1461

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 243 ttcattggaactggagaacacattgatgattttga 277
           ||||| |||||||||||||||||||||||||||||
Sbjct: 814 ttcataggaactggagaacacattgatgattttga 848

---

>gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 sequence, complete sequence
          Length = 141984

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                         
Query: 216   gttgcagctacgaaaagcccggtgatattcattggaactggagaacacattgatgatttt 275
             ||||||||||| ||||| || ||||||||||||||||| ||||| || || ||||| |||
Sbjct: 85622 gttgcagctacaaaaagtcctgtgatattcattggaacaggagagcatatggatgagttt 85563

                                    
Query: 276   gacgtttttaacgtggaaccatt 298
             || || ||| ||||  |||||||
Sbjct: 85562 gaagtgtttgacgttaaaccatt 85540



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 41    atgcgccaagttgctgaagcaacg 64
             ||||| ||||||||||||||||||
Sbjct: 85989 atgcgtcaagttgctgaagcaacg 85966

---

>gb|L19997.1|ATHSRP54A Arabidopsis thaliana signal recognition particle 54 kDa subunit
            (Srp54-1) gene, complete cds
          Length = 4060

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 216  gttgcagctacgaaaagcccggtgatattcattggaactggagaacacattgatgatttt 275
            ||||||||||| ||||| || ||||||||||||||||| ||||| || || ||||| |||
Sbjct: 2598 gttgcagctacaaaaagtcctgtgatattcattggaacaggagagcatatggatgagttt 2657

                                   
Query: 276  gacgtttttaacgtggaaccatt 298
            || || ||| ||||  |||||||
Sbjct: 2658 gaagtgtttgacgttaaaccatt 2680



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 41   atgcgccaagttgctgaagcaacg 64
            ||||| ||||||||||||||||||
Sbjct: 2231 atgcgtcaagttgctgaagcaacg 2254

---

>dbj|AB023033.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K6M13
          Length = 77129

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                         
Query: 216   gttgcagctacgaaaagcccggtgatattcattggaactggagaacacattgatgatttt 275
             ||||||||||| ||||| || || |||||||||||||| ||||| || || ||||| |||
Sbjct: 13644 gttgcagctacaaaaagtcctgtcatattcattggaacaggagagcatatggatgagttt 13585

                      
Query: 276   gacgttttt 284
             || ||||||
Sbjct: 13584 gaagttttt 13576



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                         
Query: 508   tgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtacatgacaatta 567
             |||||||| | ||||| |||||| ||||| | |  ||| | ||||| ||||||||||| |
Sbjct: 13193 tgatgccagagggacatgagaaagaaagccaggcgaagataaagcgatacatgacaatga 13134

                          
Query: 568   tggactccatgac 580
             ||||||| |||||
Sbjct: 13133 tggactctatgac 13121

---

>gb|U12126.1|ATU12126 Arabidopsis thaliana clone SRP-54B signal recognition particle 54 kDa
            subunit (Srp-54) gene, complete cds
          Length = 3152

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                        
Query: 216  gttgcagctacgaaaagcccggtgatattcattggaactggagaacacattgatgatttt 275
            ||||||||||| ||||| || || |||||||||||||| ||||| || || ||||| |||
Sbjct: 1848 gttgcagctacaaaaagtcctgtcatattcattggaacaggagagcatatggatgagttt 1907

                     
Query: 276  gacgttttt 284
            || ||||||
Sbjct: 1908 gaagttttt 1916



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                        
Query: 508  tgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtacatgacaatta 567
            |||||||| | ||||| |||||| ||||| | | | || | ||||| ||||||||||| |
Sbjct: 2299 tgatgccagagggacatgagaaagaaagccaggcagagataaagcgatacatgacaatga 2358

                         
Query: 568  tggactccatgac 580
            ||||||| |||||
Sbjct: 2359 tggactctatgac 2371

---

>gb|AC084414.2|AC084414 Arabidopsis thaliana chromosome 1 BAC F27K7 genomic sequence, complete
             sequence
          Length = 54313

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                         
Query: 216   gttgcagctacgaaaagcccggtgatattcattggaactggagaacacattgatgatttt 275
             ||||||||||||||||| || |||||||| || ||||| ||||| || || ||||| |||
Sbjct: 34068 gttgcagctacgaaaagtcctgtgatatttatcggaacaggagagcatatggatgagttt 34127

                                    
Query: 276   gacgtttttaacgtggaaccatt 298
             || || ||| ||||  |||||||
Sbjct: 34128 gaagtgtttgacgtcaaaccatt 34150



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                         
Query: 508   tgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtacatgacaatta 567
             ||||||| |||||||| |||||| ||||| | |  ||| | ||||||||||||||||| |
Sbjct: 34541 tgatgccgaaaggacatgagaaagaaagccaggcgaagataaagcggtacatgacaatga 34600

                           
Query: 568   tggactccatgaca 581
             |||| || ||||||
Sbjct: 34601 tggattctatgaca 34614



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    atgcgccaagttgctgaagcaacg 64
             ||||| ||||||||||||||||||
Sbjct: 33701 atgcgtcaagttgctgaagcaacg 33724

---

>gb|U12127.1|ATU12127 Arabidopsis thaliana clone SRP-54C signal recognition particle 54 kDa
            subunit (Srp-54) gene, complete cds
          Length = 2964

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                        
Query: 216  gttgcagctacgaaaagcccggtgatattcattggaactggagaacacattgatgatttt 275
            ||||||||||||||||| || |||||||| || ||||| ||||| || || ||||| |||
Sbjct: 1817 gttgcagctacgaaaagtcctgtgatatttatcggaacaggagagcatatggatgagttt 1876

                                   
Query: 276  gacgtttttaacgtggaaccatt 298
            || || ||| ||||  |||||||
Sbjct: 1877 gaagtgtttgacgtcaaaccatt 1899



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                        
Query: 508  tgatgccaaaaggacaggagaaacaaagcaaagaaaagttcaagcggtacatgacaatta 567
            ||||||| |||||||| |||||| ||||| | |  ||| | ||||||||||||||||| |
Sbjct: 2290 tgatgccgaaaggacatgagaaagaaagccaggcgaagataaagcggtacatgacaatga 2349

                          
Query: 568  tggactccatgaca 581
            |||| || ||||||
Sbjct: 2350 tggattctatgaca 2363



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 41   atgcgccaagttgctgaagcaacg 64
            ||||| ||||||||||||||||||
Sbjct: 1450 atgcgtcaagttgctgaagcaacg 1473

---

>gb|AY100457.1| Geodia cydonium signal recognition particle 54 kD protein (SRP54)
           mRNA, complete cds
          Length = 1586

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 240 atattcattggaactggagaacacattgatga 271
           |||||||| ||||| |||||||||||||||||
Sbjct: 837 atattcataggaacaggagaacacattgatga 868



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 81  atatttgtgatggatggcagcattggtcaggc 112
           ||||||||||||||||| | ||| ||||||||
Sbjct: 678 atatttgtgatggatgggaccataggtcaggc 709

---

>ref|NM_011899.3| Mus musculus signal recognition particle 54 (Srp54), mRNA
          Length = 3091

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                        
Query: 183  ggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgata 242
            ||||||||||| ||||||||||| || || || ||||| || || ||||| ||  | || 
Sbjct: 1068 ggtcatgcgaaaggaggcggtgctcttagtgcagttgctgccacaaaaagtccaattatt 1127

                                               
Query: 243  ttcattggaactggagaacacattgatgattttga 277
            |||||||| || || ||||| || |||||||||||
Sbjct: 1128 ttcattggtacaggggaacatatagatgattttga 1162

---

>gb|BC019683.1| Mus musculus signal recognition particle 54, mRNA (cDNA clone
            MGC:30254 IMAGE:3708250), complete cds
          Length = 2524

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                        
Query: 183  ggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgata 242
            ||||||||||| ||||||||||| || || || ||||| || || ||||| ||  | || 
Sbjct: 956  ggtcatgcgaaaggaggcggtgctcttagtgcagttgctgccacaaaaagtccaattatt 1015

                                               
Query: 243  ttcattggaactggagaacacattgatgattttga 277
            |||||||| || || ||||| || |||||||||||
Sbjct: 1016 ttcattggtacaggggaacatatagatgattttga 1050

---

>ref|XM_976538.1| PREDICTED: Mus musculus similar to signal recognition particle 54,
            transcript variant 7 (LOC665155), mRNA
          Length = 6684

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                        
Query: 183  ggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgata 242
            ||||||||||| ||||||||||| || || || ||||| || || ||||| ||  | || 
Sbjct: 1307 ggtcatgcgaaaggaggcggtgctcttagtgcagttgctgccacaaaaagtccaattatt 1366

                                               
Query: 243  ttcattggaactggagaacacattgatgattttga 277
            |||||||| || || ||||| || |||||||||||
Sbjct: 1367 ttcattggtacaggggaacatatagatgattttga 1401

---

>ref|XM_976577.1| PREDICTED: Mus musculus similar to signal recognition particle 54,
            transcript variant 8 (LOC665155), mRNA
          Length = 8119

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                        
Query: 183  ggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgata 242
            ||||||||||| ||||||||||| || || || ||||| || || ||||| ||  | || 
Sbjct: 1307 ggtcatgcgaaaggaggcggtgctcttagtgcagttgctgccacaaaaagtccaattatt 1366

                                               
Query: 243  ttcattggaactggagaacacattgatgattttga 277
            |||||||| || || ||||| || |||||||||||
Sbjct: 1367 ttcattggtacaggggaacatatagatgattttga 1401

---

>ref|XM_976502.1| PREDICTED: Mus musculus similar to signal recognition particle 54,
            transcript variant 6 (LOC665155), mRNA
          Length = 7767

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                        
Query: 183  ggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgata 242
            ||||||||||| ||||||||||| || || || ||||| || || ||||| ||  | || 
Sbjct: 955  ggtcatgcgaaaggaggcggtgctcttagtgcagttgctgccacaaaaagtccaattatt 1014

                                               
Query: 243  ttcattggaactggagaacacattgatgattttga 277
            |||||||| || || ||||| || |||||||||||
Sbjct: 1015 ttcattggtacaggggaacatatagatgattttga 1049

---

>ref|XM_976391.1| PREDICTED: Mus musculus similar to signal recognition particle 54,
            transcript variant 3 (LOC665155), mRNA
          Length = 6782

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                        
Query: 183  ggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgata 242
            ||||||||||| ||||||||||| || || || ||||| || || ||||| ||  | || 
Sbjct: 1307 ggtcatgcgaaaggaggcggtgctcttagtgcagttgctgccacaaaaagtccaattatt 1366

                                               
Query: 243  ttcattggaactggagaacacattgatgattttga 277
            |||||||| || || ||||| || |||||||||||
Sbjct: 1367 ttcattggtacaggggaacatatagatgattttga 1401

---

>emb|X16319.1|MMSRP54 Mouse mRNA for 54K subunit of signal recognition particle
          Length = 2117

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                        
Query: 183  ggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgata 242
            ||||||||||| ||||||||||| || || || ||||| || || ||||| ||  | || 
Sbjct: 992  ggtcatgcgaaaggaggcggtgctcttagtgcagttgctgccacaaaaagtccaattatc 1051

                                               
Query: 243  ttcattggaactggagaacacattgatgattttga 277
            |||||||| || || ||||| || |||||||||||
Sbjct: 1052 ttcattggtacaggggaacatatagatgattttga 1086

---

>dbj|AK136033.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420449G16 product:signal
            recognition particle 54, full insert sequence
          Length = 3637

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                        
Query: 183  ggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgata 242
            ||||||||||| ||||||||||| || || || ||||| || || ||||| ||  | || 
Sbjct: 1264 ggtcatgcgaaaggaggcggtgctcttagtgcagttgctgccacaaaaagtccaattatt 1323

                                               
Query: 243  ttcattggaactggagaacacattgatgattttga 277
            |||||||| || || ||||| || |||||||||||
Sbjct: 1324 ttcattggtacaggggaacatatagatgattttga 1358

---

>dbj|AK146826.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched
            library, clone:I920062C06 product:signal recognition
            particle 54, full insert sequence
          Length = 2479

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                        
Query: 183  ggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgata 242
            ||||||||||| ||||||||||| || || || ||||| || || ||||| ||  | || 
Sbjct: 992  ggtcatgcgaaaggaggcggtgctcttagtgcagttgctgccacaaaaagtccaattatt 1051

                                               
Query: 243  ttcattggaactggagaacacattgatgattttga 277
            |||||||| || || ||||| || |||||||||||
Sbjct: 1052 ttcattggtacaggggaacatatagatgattttga 1086

---

>dbj|AK011928.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2610209C12 product:signal
            recognition particle 54 kDa, full insert sequence
          Length = 2387

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                        
Query: 183  ggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtgata 242
            ||||||||||| ||||||||||| || || || ||||| || || ||||| ||  | || 
Sbjct: 991  ggtcatgcgaaaggaggcggtgctcttagtgcagttgctgccacaaaaagtccaattatt 1050

                                               
Query: 243  ttcattggaactggagaacacattgatgattttga 277
            |||||||| || || ||||| || |||||||||||
Sbjct: 1051 ttcattggtacaggggaacatatagatgattttga 1085

---

>gb|AC119954.12| Mus musculus chromosome 1, clone RP24-450P2, complete sequence
          Length = 179212

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 241   tattcattggaactggagaaca 262
             ||||||||||||||||||||||
Sbjct: 66993 tattcattggaactggagaaca 67014

---

>gb|AC137558.3| Mus musculus BAC clone RP23-16I17 from chromosome 6, complete sequence
          Length = 225612

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 510   atgccaaaaggacaggagaaacaaag 535
             |||||||||| |||||||||||||||
Sbjct: 68878 atgccaaaagcacaggagaaacaaag 68853

---

>gb|AC160529.6| Mus musculus chromosome 1, clone RP24-141F19, complete sequence
          Length = 167687

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 241    tattcattggaactggagaaca 262
              ||||||||||||||||||||||
Sbjct: 166030 tattcattggaactggagaaca 166009

---

>ref|XM_792876.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9695-PA
           (LOC593400), mRNA
          Length = 840

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 438 ttccagaatcttctgaaaatgg 459
           ||||||||||||||||||||||
Sbjct: 64  ttccagaatcttctgaaaatgg 43

---

>emb|BX026548.1|CNS08SNC Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA4DE03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 674

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 183 ggtcatgcgaagggaggcggtgcact 208
           |||||||||||||| |||||||||||
Sbjct: 405 ggtcatgcgaagggtggcggtgcact 430

---

>emb|X16318.1|CFSRP54 Canine mRNA for signal recognition particle 54k protein
          Length = 2296

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 79/98 (80%)
 Strand = Plus / Plus

                                                                        
Query: 180  gatggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtg 239
            ||||| ||||| || ||||| |||||||| || || ||||| || || ||||| ||  | 
Sbjct: 1127 gatggccatgcaaaaggaggtggtgcactcagtgcagttgctgccacaaaaagtccaatt 1186

                                                  
Query: 240  atattcattggaactggagaacacattgatgattttga 277
            || |||||||| || || |||||||| |||||||||||
Sbjct: 1187 attttcattggtacaggggaacacatagatgattttga 1224

---

>ref|NM_001003272.1| Canis familiaris signal recognition particle 54kDa (SRP54), mRNA
          Length = 2296

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 79/98 (80%)
 Strand = Plus / Plus

                                                                        
Query: 180  gatggtcatgcgaagggaggcggtgcactgagcgcggttgcagctacgaaaagcccggtg 239
            ||||| ||||| || ||||| |||||||| || || ||||| || || ||||| ||  | 
Sbjct: 1127 gatggccatgcaaaaggaggtggtgcactcagtgcagttgctgccacaaaaagtccaatt 1186

                                                  
Query: 240  atattcattggaactggagaacacattgatgattttga 277
            || |||||||| || || |||||||| |||||||||||
Sbjct: 1187 attttcattggtacaggggaacacatagatgattttga 1224

---

>ref|XM_315212.2| Anopheles gambiae str. PEST ENSANGP00000020889
           (ENSANGG00000018400), partial mRNA
          Length = 1720

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 183 ggtcatgcgaagggaggcggtgcact 208
           |||||||||||||| |||||||||||
Sbjct: 959 ggtcatgcgaagggtggcggtgcact 984

---

>emb|Z54271.1|CEF21D5 Caenorhabditis elegans Cosmid F21D5, complete sequence
          Length = 21173

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 427   tgtatgagcaattccagaatcttctgaaaatgggacc 463
             |||||||||||||||| ||  || |||||||||||||
Sbjct: 20780 tgtatgagcaattccaaaacattatgaaaatgggacc 20744

---

>emb|Z34518.1|LESSRPSPG L.esculentum (cv. Rentita) mRNA for 54-kD signal recognition particle
            (SRP) specific protein
          Length = 9288

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                         
Query: 240  atattcattggaactggagaacacattgatgattttgacgttttt 284
            ||||| ||||||||||| |||||||| || || ||||| ||||||
Sbjct: 4411 atatttattggaactggtgaacacatggacgagtttgaagttttt 4455



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 553  ggtacatgacaattatggactccatgac 580
            |||| |||||||| ||||||||||||||
Sbjct: 8050 ggtatatgacaatgatggactccatgac 8077

---

>emb|BX842614.9| Zebrafish DNA sequence from clone DKEY-76I15 in linkage group 14,
            complete sequence
          Length = 73110

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 526  agaaacaaagcaaagaaaagt 546
            |||||||||||||||||||||
Sbjct: 7753 agaaacaaagcaaagaaaagt 7773

---

>ref|NM_069106.3| Caenorhabditis elegans F21D5.7 (F21D5.7) mRNA, complete cds
          Length = 1892

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 427  tgtatgagcaattccagaatcttctgaaaatgggacc 463
            |||||||||||||||| ||  || |||||||||||||
Sbjct: 1003 tgtatgagcaattccaaaacattatgaaaatgggacc 1039

---

>dbj|AB028615.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MIL15
          Length = 84157

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 528   aaacaaagcaaagaaaagttc 548
             |||||||||||||||||||||
Sbjct: 55777 aaacaaagcaaagaaaagttc 55797

---

>emb|CR956393.14| Pig DNA sequence from clone CH242-163M14 on chromosome 17, complete
             sequence
          Length = 195684

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 382   agcttgtggcaaagctgtctg 402
             |||||||||||||||||||||
Sbjct: 97731 agcttgtggcaaagctgtctg 97751

---

>dbj|AP004926.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13P22, TM0079c,
             complete sequence
          Length = 109022

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 522   caggagaaacaaagcaaagaa 542
             |||||||||||||||||||||
Sbjct: 19216 caggagaaacaaagcaaagaa 19196

---

>gb|AC102616.7| Mus musculus chromosome 18, clone RP23-425L21, complete sequence
          Length = 192276

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   agaaacaaagcaaagaaaag 545
             ||||||||||||||||||||
Sbjct: 73070 agaaacaaagcaaagaaaag 73089

---

>gb|AC168306.7| Mus musculus chromosome 18, clone RP23-225N9, complete sequence
          Length = 198815

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 526    agaaacaaagcaaagaaaag 545
              ||||||||||||||||||||
Sbjct: 192066 agaaacaaagcaaagaaaag 192047

---

>ref|XM_524774.1| PREDICTED: Pan troglodytes LOC469389 (LOC469389), mRNA
          Length = 1836

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 423 cttctgtatgagcaattcca 442
           ||||||||||||||||||||
Sbjct: 664 cttctgtatgagcaattcca 645

---

>ref|XM_676714.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8537.2), mRNA
          Length = 1617

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 560 gacaattatggactccatga 579
           ||||||||||||||||||||
Sbjct: 343 gacaattatggactccatga 362

---

>gb|AC157901.4| Mus musculus chromosome 18, clone RP23-189P21, complete sequence
          Length = 191242

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   agaaacaaagcaaagaaaag 545
             ||||||||||||||||||||
Sbjct: 34632 agaaacaaagcaaagaaaag 34613

---

>gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, complete sequence
          Length = 255663

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 516   aaaggacaggagaaacaaagcaaa 539
             ||||||||||||||||||| ||||
Sbjct: 22438 aaaggacaggagaaacaaaacaaa 22461

---

>gb|AC124182.4| Mus musculus BAC clone RP23-207J3 from chromosome 15, complete sequence
          Length = 195532

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 516   aaaggacaggagaaacaaagcaaa 539
             ||||||||||||||||||| ||||
Sbjct: 10296 aaaggacaggagaaacaaaacaaa 10273

---

>gb|AC124422.5| Mus musculus BAC clone RP24-326L13 from chromosome 9, complete
            sequence
          Length = 174375

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 433  agcaattccagaatcttctg 452
            ||||||||||||||||||||
Sbjct: 7212 agcaattccagaatcttctg 7193

---

>emb|CR728994.2|CNS0GPFS Tetraodon nigroviridis full-length cDNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 246 attggaactggagaacacattgatgattttga 277
           |||||||| || |||||||||||||| |||||
Sbjct: 451 attggaacaggggaacacattgatgactttga 482

---

>gb|BC044991.1| Xenopus laevis signal recognition particle 54 kDa, mRNA (cDNA clone
            MGC:53033 IMAGE:5537314), complete cds
          Length = 1901

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 427  tgtatgagcaattccagaatcttctgaaaatgggaccaatgagccagatctt 478
            ||||||||||||| || ||| |  |||||||||| ||| | |||||||||||
Sbjct: 1137 tgtatgagcaatttcaaaatatcatgaaaatgggtccattcagccagatctt 1188

---

>emb|CR724674.1|CNS0GM3S Tetraodon nigroviridis full-length cDNA
          Length = 1439

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 246 attggaactggagaacacattgatgattttga 277
           |||||||| || |||||||||||||| |||||
Sbjct: 435 attggaacaggggaacacattgatgactttga 466

---

>emb|CR681634.2|CNS0FOWE Tetraodon nigroviridis full-length cDNA
          Length = 1477

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 246 attggaactggagaacacattgatgattttga 277
           |||||||| || |||||||||||||| |||||
Sbjct: 675 attggaacaggggaacacattgatgactttga 706

---

>ref|XM_663484.1| Cryptosporidium hominis TU502 signal recognition particle protein
           SRP54 (Chro.70193) partial mRNA
          Length = 891

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 246 attggaactggagaacacattgatgattttga 277
           |||||||||||||||||  ||||||| |||||
Sbjct: 205 attggaactggagaacattttgatgagtttga 236

---

>emb|CR392328.18| Zebrafish DNA sequence from clone DKEYP-108C1 in linkage group 5,
             complete sequence
          Length = 182066

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   tgctgtgattgtcacgaaat 177
             ||||||||||||||||||||
Sbjct: 38434 tgctgtgattgtcacgaaat 38453

---

>emb|AL445530.19| Human DNA sequence from clone RP1-61F10 on chromosome 6 Contains part
             of the RNGTT gene for RNA guanylyltransferase and
             5'-phosphatase (mRNA capping enzyme, CAP1A), complete
             sequence
          Length = 57464

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   aaggagccttcactctcaga 422
             ||||||||||||||||||||
Sbjct: 43317 aaggagccttcactctcaga 43336

---

>emb|AL356137.10| Human DNA sequence from clone RP11-515I12 on chromosome 6, complete
              sequence
          Length = 135837

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 521    acaggagaaacaaagcaaagaaaa 544
              |||||||||| |||||||||||||
Sbjct: 130200 acaggagaaagaaagcaaagaaaa 130177

---

>gb|AF541281.1| Homo sapiens plasticity related gene 1 mRNA, complete cds
          Length = 5047

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 423  cttctgtatgagcaattcca 442
            ||||||||||||||||||||
Sbjct: 1285 cttctgtatgagcaattcca 1266

---

>emb|AL139425.8| Human DNA sequence from clone RP4-788L13 on chromosome 1p21.1-21.3
             Contains the 3' end of gene for plasticity related gene 1
             (PRG), complete sequence
          Length = 68858

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   cttctgtatgagcaattcca 442
             ||||||||||||||||||||
Sbjct: 13363 cttctgtatgagcaattcca 13344

---

>gb|AY304518.1| Homo sapiens lipid phosphate phosphatase-related protein type 4 mRNA,
            complete cds
          Length = 4968

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 423  cttctgtatgagcaattcca 442
            ||||||||||||||||||||
Sbjct: 1226 cttctgtatgagcaattcca 1207

---

>emb|AL627282.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 18/20
          Length = 234050

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 441    cagaatcttctgaaaatggg 460
              ||||||||||||||||||||
Sbjct: 170486 cagaatcttctgaaaatggg 170467

---

>gb|BC042963.1| Homo sapiens plasticity related gene 1, mRNA (cDNA clone
            IMAGE:5287060), partial cds
          Length = 4854

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 423  cttctgtatgagcaattcca 442
            ||||||||||||||||||||
Sbjct: 1096 cttctgtatgagcaattcca 1077

---

>emb|BX547996.10| Zebrafish DNA sequence from clone CH211-212H16 in linkage group 1,
              complete sequence
          Length = 213398

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    ttctgtatgagcaattccag 443
              ||||||||||||||||||||
Sbjct: 100596 ttctgtatgagcaattccag 100577

---

>emb|AL672181.11| Mouse DNA sequence from clone RP23-223D16 on chromosome 11, complete
             sequence
          Length = 181460

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 507   ttgatgccaaaaggacaggagaaa 530
             ||||||||||||| ||||||||||
Sbjct: 95978 ttgatgccaaaagcacaggagaaa 95955

---

>emb|AL834390.1|HSM805469 Homo sapiens mRNA; cDNA DKFZp761A0623 (from clone DKFZp761A0623)
          Length = 4554

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 423 cttctgtatgagcaattcca 442
           ||||||||||||||||||||
Sbjct: 791 cttctgtatgagcaattcca 772

---

>gb|AF521595.1| Salmonella typhimurium class A nonspecific acid phosphatase PhoN
           gene, complete cds
          Length = 882

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 441 cagaatcttctgaaaatggg 460
           ||||||||||||||||||||
Sbjct: 421 cagaatcttctgaaaatggg 440

---

>dbj|AK056665.1| Homo sapiens cDNA FLJ32103 fis, clone OCBBF2001210, weakly similar to
            Cavia porcellus phosphatidic acid phosphatase 2a (PAP2a)
            mRNA
          Length = 2863

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 423  cttctgtatgagcaattcca 442
            ||||||||||||||||||||
Sbjct: 1226 cttctgtatgagcaattcca 1207

---

>gb|AC008829.7| Homo sapiens chromosome 5 clone CTD-2140K22, complete sequence
          Length = 159145

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 525   gagaaacaaagcaaagaaaa 544
             ||||||||||||||||||||
Sbjct: 70302 gagaaacaaagcaaagaaaa 70321

---

>ref|NM_014839.3| Homo sapiens plasticity related gene 1 (LPPR4), mRNA
          Length = 4988

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 423  cttctgtatgagcaattcca 442
            ||||||||||||||||||||
Sbjct: 1226 cttctgtatgagcaattcca 1207

---

>emb|BX510649.12| Zebrafish DNA sequence from clone CH211-158M24 in linkage group 5,
             complete sequence
          Length = 189844

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   tgctgtgattgtcacgaaat 177
             ||||||||||||||||||||
Sbjct: 32548 tgctgtgattgtcacgaaat 32567

---

>gb|AF366353.1|AF366353 Salmonella typhi acid phosphatase precursor (phoN) gene, complete
           cds
          Length = 938

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 441 cagaatcttctgaaaatggg 460
           ||||||||||||||||||||
Sbjct: 448 cagaatcttctgaaaatggg 467

---

>dbj|AB007924.3| Homo sapiens mRNA for KIAA0455 protein, partial cds
          Length = 5014

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 423  cttctgtatgagcaattcca 442
            ||||||||||||||||||||
Sbjct: 1274 cttctgtatgagcaattcca 1255

---

>gb|AF357013.1| Homo sapiens brain-specific phosphatidic acid phosphatase-like
            protein 1 mRNA, complete cds
          Length = 4813

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 423  cttctgtatgagcaattcca 442
            ||||||||||||||||||||
Sbjct: 1051 cttctgtatgagcaattcca 1032

---

>gb|AC104035.6| Homo sapiens chromosome 15, clone RP11-661P17, complete sequence
          Length = 200370

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 528   aaacaaagcaaagaaaagttcaag 551
             ||||||||||||||||| ||||||
Sbjct: 35785 aaacaaagcaaagaaaacttcaag 35808

---

>gb|AC108673.11| Homo sapiens 3 BAC RP11-434H6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 137864

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 406   gagccttcactctcagacttctgt 429
             |||| |||||||||||||||||||
Sbjct: 58061 gagctttcactctcagacttctgt 58038

---

>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 441     cagaatcttctgaaaatggg 460
               ||||||||||||||||||||
Sbjct: 4315287 cagaatcttctgaaaatggg 4315268

---

>emb|BX682227.3| Mouse DNA sequence from clone RP23-190N2 on chromosome X, complete
             sequence
          Length = 76641

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 532   aaagcaaagaaaagttcaag 551
             ||||||||||||||||||||
Sbjct: 54963 aaagcaaagaaaagttcaag 54982

---

>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 441     cagaatcttctgaaaatggg 460
               ||||||||||||||||||||
Sbjct: 4393136 cagaatcttctgaaaatggg 4393117

---

>dbj|AP000776.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-748H22, complete
              sequence
          Length = 191270

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 525    gagaaacaaagcaaagaaaa 544
              ||||||||||||||||||||
Sbjct: 154582 gagaaacaaagcaaagaaaa 154601

---

>dbj|AP001838.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-718B20, complete
             sequences
          Length = 211652

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 522   caggagaaacaaagcaaagaaaag 545
             ||||||||| ||||||||||||||
Sbjct: 20801 caggagaaataaagcaaagaaaag 20824

---

>gb|AC139322.4| Mus musculus BAC clone RP24-397L22 from 9, complete sequence
          Length = 186567

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 433  agcaattccagaatcttctg 452
            ||||||||||||||||||||
Sbjct: 7737 agcaattccagaatcttctg 7756

---

>gb|AC149201.2| Macaca mulatta Try4 (try4) gene, complete cds; trypsinogen (try5) and
            trypsinogen (try6) pseudogenes, complete sequence;
            trypsinogen (try7) pseudogene, partial sequence;
            trypsinogen (try8) pseudogene, complete sequence; try9
            (try9) and try10 (try10) genes, complete cds; trypsinogen
            (try11) pseudogene, complete sequence; try12 (try12),
            try13 (try13), and try14 (try14) genes, complete cds;
            trypsinogen (try15) pseudogene, complete sequence; and
            try16 (try16) gene, complete cds
          Length = 188583

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 442  agaatcttctgaaaatggga 461
            ||||||||||||||||||||
Sbjct: 2262 agaatcttctgaaaatggga 2281

---

>emb|AL161871.6|CNS01RHN Human chromosome 14 DNA sequence BAC R-66E7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 148068

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 389   ggcaaagctgtctgaaggag 408
             ||||||||||||||||||||
Sbjct: 60579 ggcaaagctgtctgaaggag 60560


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,058,357
Number of Sequences: 3902068
Number of extensions: 5058357
Number of successful extensions: 102421
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102096
Number of HSP's gapped (non-prelim): 300
length of query: 650
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 627
effective length of database: 17,143,297,704
effective search space: 10748847660408
effective search space used: 10748847660408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---