ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalk04 |
|---|---|
| Clone Library Name | barley_pub |
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 389 bits (999), Expect = e-108 Identities = 192/212 (90%), Positives = 198/212 (93%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THGYVGADLAALCTEAALQCIREKMD+IDLEDETIDAE+LNSMAVTN+HF+TAL TSNPS Sbjct: 407 THGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGTSNPS 466 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC Sbjct: 467 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 526 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKAR SAPCVLFFDELDSI Sbjct: 527 GKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 ATQR RVLNQLLTEMDGM+AK Sbjct: 587 ATQRGSSVGDAGGAADRVLNQLLTEMDGMSAK 618 Score = 135 bits (340), Expect = 1e-31 Identities = 63/150 (42%), Positives = 99/150 (66%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 RE + V ++D+GG+ +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GK Sbjct: 196 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A +AP ++F DE+DSIA Sbjct: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 +R R+++QLLT MDG+ ++ Sbjct: 316 KR---EKTHGEVERRIVSQLLTLMDGLKSR 342
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 386 bits (991), Expect = e-107 Identities = 192/212 (90%), Positives = 196/212 (92%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THGYVGADLAALCTEAALQCIREKMD+IDL+DE IDAEILNSMAV+NDHF+TAL SNPS Sbjct: 407 THGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNSMAVSNDHFQTALGNSNPS 466 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC Sbjct: 467 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 526 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR SAPCVLFFDELDSI Sbjct: 527 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 ATQR RVLNQLLTEMDGMNAK Sbjct: 587 ATQRGNSVGDAGGAADRVLNQLLTEMDGMNAK 618 Score = 135 bits (340), Expect = 1e-31 Identities = 63/150 (42%), Positives = 99/150 (66%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 RE + V ++D+GG+ +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GK Sbjct: 196 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A +AP ++F DE+DSIA Sbjct: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 +R R+++QLLT MDG+ ++ Sbjct: 316 KR---EKTHGEVERRIVSQLLTLMDGLKSR 342
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 385 bits (990), Expect = e-107 Identities = 190/212 (89%), Positives = 197/212 (92%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THGYVGADLAALCTEAALQCIREKMD++DLED+TIDAE+LNSMAVTN+HF+TAL TSNPS Sbjct: 407 THGYVGADLAALCTEAALQCIREKMDVLDLEDDTIDAEVLNSMAVTNEHFQTALGTSNPS 466 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVE PEKFEKFGMSPSKGVLFYGPPGC Sbjct: 467 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGC 526 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKAR SAPCVLFFDELDSI Sbjct: 527 GKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 ATQR RVLNQLLTEMDGMNAK Sbjct: 587 ATQRGSSSGDAGGAADRVLNQLLTEMDGMNAK 618 Score = 135 bits (340), Expect = 1e-31 Identities = 63/150 (42%), Positives = 99/150 (66%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 RE + V ++D+GG+ +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GK Sbjct: 196 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A +AP ++F DE+DSIA Sbjct: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 +R R+++QLLT MDG+ ++ Sbjct: 316 KR---EKTHGEVERRIVSQLLTLMDGLKSR 342
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 384 bits (987), Expect = e-106 Identities = 190/212 (89%), Positives = 196/212 (92%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THGYVGADLAALCTEAALQCIREKMD+IDLED++IDAEILNSMAV+N+HF TAL SNPS Sbjct: 406 THGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPS 465 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC Sbjct: 466 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 525 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKAR SAPCVLFFDELDSI Sbjct: 526 GKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 585 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 ATQR RVLNQLLTEMDGMNAK Sbjct: 586 ATQRGNSAGDAGGAADRVLNQLLTEMDGMNAK 617 Score = 135 bits (340), Expect = 1e-31 Identities = 63/150 (42%), Positives = 99/150 (66%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 RE + V ++D+GG+ +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GK Sbjct: 195 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 254 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A +AP ++F DE+DSIA Sbjct: 255 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 314 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 +R R+++QLLT MDG+ ++ Sbjct: 315 KR---EKTNGEVERRIVSQLLTLMDGLKSR 341
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 379 bits (972), Expect = e-105 Identities = 190/213 (89%), Positives = 195/213 (91%), Gaps = 1/213 (0%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THGYVGADLAALCTEAALQCIREKMD+IDLED++IDAEILNSMAVTN+HF TAL SNPS Sbjct: 406 THGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPS 465 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 ALRETVVEVPNVSW DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC Sbjct: 466 ALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 525 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKAR SAPCVLFFDELDSI Sbjct: 526 GKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 585 Query: 590 ATQR-XXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 ATQR RVLNQLLTEMDGMNAK Sbjct: 586 ATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAK 618 Score = 135 bits (341), Expect = 9e-32 Identities = 63/150 (42%), Positives = 100/150 (66%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 RE + +V ++D+GG+ +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GK Sbjct: 195 REDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 254 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A +AP ++F DE+DSIA Sbjct: 255 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 314 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 +R R+++QLLT MDG+ ++ Sbjct: 315 KR---EKTNGEVERRIVSQLLTLMDGLKSR 341
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 347 bits (890), Expect = 2e-95 Identities = 171/212 (80%), Positives = 188/212 (88%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT D F+ AL+ SNPS Sbjct: 402 THGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 461 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 ALRETVVEVP V+WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGC Sbjct: 462 ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGC 521 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR +APCVLFFDELDSI Sbjct: 522 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSI 581 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 A R RV+NQ+LTEMDGM+ K Sbjct: 582 AKARGGNIGDGGGAADRVINQILTEMDGMSTK 613 Score = 129 bits (323), Expect = 1e-29 Identities = 61/141 (43%), Positives = 93/141 (65%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+AN Sbjct: 200 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 259 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E A F I GPE+++ GESE+N+R+ F++A +AP ++F DELD+IA +R Sbjct: 260 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKTH 316 Query: 623 XXXXXRVLNQLLTEMDGMNAK 685 R+++QLLT MDG+ + Sbjct: 317 GEVERRIVSQLLTLMDGLKQR 337
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 347 bits (890), Expect = 2e-95 Identities = 171/212 (80%), Positives = 188/212 (88%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT D F+ AL+ SNPS Sbjct: 402 THGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 461 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 ALRETVVEVP V+WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGC Sbjct: 462 ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGC 521 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR +APCVLFFDELDSI Sbjct: 522 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSI 581 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 A R RV+NQ+LTEMDGM+ K Sbjct: 582 AKARGGNIGDGGGAADRVINQILTEMDGMSTK 613 Score = 128 bits (322), Expect = 1e-29 Identities = 60/141 (42%), Positives = 93/141 (65%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V ++D+GG +++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+AN Sbjct: 200 VGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 259 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E A F I GPE+++ GESE+N+R+ F++A +AP ++F DELD+IA +R Sbjct: 260 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKTH 316 Query: 623 XXXXXRVLNQLLTEMDGMNAK 685 R+++QLLT MDG+ + Sbjct: 317 GEVERRIVSQLLTLMDGLKQR 337
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 347 bits (890), Expect = 2e-95 Identities = 171/212 (80%), Positives = 188/212 (88%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT D F+ AL+ SNPS Sbjct: 402 THGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 461 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 ALRETVVEVP V+WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGC Sbjct: 462 ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGC 521 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR +APCVLFFDELDSI Sbjct: 522 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSI 581 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 A R RV+NQ+LTEMDGM+ K Sbjct: 582 AKARGGNIGDGGGAADRVINQILTEMDGMSTK 613 Score = 129 bits (323), Expect = 1e-29 Identities = 61/141 (43%), Positives = 93/141 (65%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+AN Sbjct: 200 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 259 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E A F I GPE+++ GESE+N+R+ F++A +AP ++F DELD+IA +R Sbjct: 260 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKTH 316 Query: 623 XXXXXRVLNQLLTEMDGMNAK 685 R+++QLLT MDG+ + Sbjct: 317 GEVERRIVSQLLTLMDGLKQR 337
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 346 bits (887), Expect = 4e-95 Identities = 170/212 (80%), Positives = 188/212 (88%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT D F+ AL+ SNPS Sbjct: 402 THGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 461 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 ALRETVVEVP V+WEDIGGLE+VKRELQ+ VQYPVEHP+KF KFGM+PSKGVLFYGPPGC Sbjct: 462 ALRETVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGC 521 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR +APCVLFFDELDSI Sbjct: 522 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSI 581 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 A R RV+NQ+LTEMDGM+ K Sbjct: 582 AKARGGNIGDGGGAADRVINQILTEMDGMSTK 613 Score = 129 bits (323), Expect = 1e-29 Identities = 61/141 (43%), Positives = 93/141 (65%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+AN Sbjct: 200 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 259 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E A F I GPE+++ GESE+N+R+ F++A +AP ++F DELD+IA +R Sbjct: 260 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKTH 316 Query: 623 XXXXXRVLNQLLTEMDGMNAK 685 R+++QLLT MDG+ + Sbjct: 317 GEVERRIVSQLLTLMDGLKQR 337
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) Length = 805 Score = 345 bits (885), Expect = 7e-95 Identities = 170/212 (80%), Positives = 187/212 (88%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT D F+ L+ SNPS Sbjct: 403 THGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWGLSQSNPS 462 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 ALRETVVEVP V+WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGC Sbjct: 463 ALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGC 522 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR +APCVLFFDELDSI Sbjct: 523 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSI 582 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 A R RV+NQ+LTEMDGM+ K Sbjct: 583 AKARGGNIGDGGGAADRVINQILTEMDGMSIK 614 Score = 129 bits (323), Expect = 1e-29 Identities = 61/141 (43%), Positives = 93/141 (65%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+AN Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E A F I GPE+++ GESE+N+R+ F++A +AP ++F DELD+IA +R Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKTH 317 Query: 623 XXXXXRVLNQLLTEMDGMNAK 685 R+++QLLT MDG+ + Sbjct: 318 GEVERRIVSQLLTLMDGLKQR 338
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 335 bits (859), Expect = 8e-92 Identities = 161/211 (76%), Positives = 184/211 (87%) Frame = +2 Query: 53 HGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSA 232 HG+VGADLA+LC+EAA+Q IREKM++IDLED+TIDAE+LNS+AVT ++F+ A+ S+PSA Sbjct: 409 HGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSA 468 Query: 233 LRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 412 LRE VVE PN +W DIGGL+NVKRELQE VQYPVEHPEK+ KFGM PS+GVLFYGPPGCG Sbjct: 469 LREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 528 Query: 413 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA 592 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVR++FDKAR +APCVLFFDELDSIA Sbjct: 529 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 588 Query: 593 TQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 R RV+NQ+LTEMDGMNAK Sbjct: 589 KARGGSVGDAGGAADRVINQVLTEMDGMNAK 619 Score = 125 bits (314), Expect = 1e-28 Identities = 61/151 (40%), Positives = 97/151 (64%), Gaps = 1/151 (0%) Frame = +2 Query: 236 RETVVEVPN-VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 412 RE E N V ++D+GG+ +++E V+ P+ HP+ F+ G+ P +G+L +GPPG G Sbjct: 196 REEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTG 255 Query: 413 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA 592 KTL+A+A+ANE A F I GPE+++ GESE+N+R+ F + ++P +LF DE+D+IA Sbjct: 256 KTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIA 315 Query: 593 TQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 +R R+++QLLT MDG+ + Sbjct: 316 PKR---EKAHGEVEKRIVSQLLTLMDGLKTR 343
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 327 bits (838), Expect = 2e-89 Identities = 161/212 (75%), Positives = 182/212 (85%), Gaps = 1/212 (0%) Frame = +2 Query: 53 HGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSA 232 HG+VGADLA+LC+EAALQ IREKM++IDLED+ IDAE+LNS+AVT ++F+ A S+PSA Sbjct: 410 HGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSA 469 Query: 233 LRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 412 LRE VVE PN +W DIGGL+NVKRELQE VQYPVEHPEK+ KFGM PS+GVLFYGPPGCG Sbjct: 470 LREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 529 Query: 413 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA 592 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVR++FDKAR +APCVLFFDELDSIA Sbjct: 530 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 589 Query: 593 TQR-XXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 R RV+NQ+LTEMDGMNAK Sbjct: 590 KARGGGAGGDGGGASDRVINQVLTEMDGMNAK 621 Score = 124 bits (312), Expect = 2e-28 Identities = 57/155 (36%), Positives = 98/155 (63%) Frame = +2 Query: 221 NPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 400 +P E + ++ ++D+GG+ +++E V+ P+ HP+ F+ G+ P +G+L +GP Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252 Query: 401 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDEL 580 PG GKTL+A+A+ANE + F I GPE+++ GESE+N+R+ F++ + P +LF DE+ Sbjct: 253 PGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEI 312 Query: 581 DSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 D+IA +R R+++QLLT MDG+ + Sbjct: 313 DAIAPKR---EKTNGEVERRIVSQLLTLMDGVKGR 344
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 310 bits (794), Expect = 3e-84 Identities = 153/212 (72%), Positives = 182/212 (85%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THGYVG+DLA+LC+EAA+Q IREKMD+IDL+++ IDAE+L+S+ VT D+F+ AL +SNPS Sbjct: 423 THGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRFALGSSNPS 482 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 ALRETVVEVPNV WEDIGGLE VKREL+ETVQ PV + EKF +FG++PSKGVLF+GPPG Sbjct: 483 ALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGT 542 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKAIANEC ANFIS+KGPELL+MWFGESE+NVR+IFDKAR +APCV+F DELDSI Sbjct: 543 GKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSI 602 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 A R RV+NQLLTEMDG+N+K Sbjct: 603 AKAR-GASAGDSGGGDRVVNQLLTEMDGVNSK 633 Score = 134 bits (336), Expect = 3e-31 Identities = 63/141 (44%), Positives = 95/141 (67%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V ++DIGG +++E V+ P+ HP+ F+ G+ P +G+L YGPPG GKTL+A+A+AN Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E A F I GPE+++ GESE+N+R+ F++A ++P ++F DE+DSIA +R Sbjct: 281 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR---EKTN 337 Query: 623 XXXXXRVLNQLLTEMDGMNAK 685 RV++QLLT MDGM A+ Sbjct: 338 GEVERRVVSQLLTLMDGMKAR 358
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 303 bits (777), Expect = 2e-82 Identities = 144/212 (67%), Positives = 178/212 (83%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THGYVGAD+A+LC+EAA+Q IREKMD+IDL+++ IDAE+L+S+ VT D+F+ AL SNPS Sbjct: 413 THGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPS 472 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 ALRETVVE NV+W+D+GGL+ +K EL+ETV+YPV HP+++ KFG+SPSKGVLFYGPPG Sbjct: 473 ALRETVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGT 532 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKA+A E ANFIS+KGPELL+MW+GESE+N+R+IFDKAR +AP V+F DELDSI Sbjct: 533 GKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSI 592 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 A R RV+NQLLTEMDGMNAK Sbjct: 593 AKARGGSLGDAGGASDRVVNQLLTEMDGMNAK 624 Score = 134 bits (338), Expect = 2e-31 Identities = 65/141 (46%), Positives = 95/141 (67%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V ++DIGG +++E V+ P+ HP+ F+ G+ P +GVL YGPPG GKTL+A+A+AN Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E A F I GPE+++ GESE+N+R+ F++A +AP ++F DE+DSIA +R Sbjct: 271 ETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKR---DKTN 327 Query: 623 XXXXXRVLNQLLTEMDGMNAK 685 RV++QLLT MDGM A+ Sbjct: 328 GEVERRVVSQLLTLMDGMKAR 348
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 253 bits (646), Expect = 4e-67 Identities = 125/209 (59%), Positives = 157/209 (75%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THG+VGADLAALC EAA++ +R + IDLE E I E+L+++ VT D FK AL PS Sbjct: 378 THGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVEPS 437 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 A+RE +VEVPNV WEDIGGLE VK+EL+E V++P++ E FEK G+ P KGVL +GPPG Sbjct: 438 AMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGT 497 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKA+ANE ANFIS+KGPE+ + W GESE +REIF KAR SAPC++FFDE+D+I Sbjct: 498 GKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAI 557 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGM 676 A +R +V+NQLLTE+DGM Sbjct: 558 APKR--GRDLSSAVTDKVVNQLLTELDGM 584 Score = 149 bits (375), Expect = 1e-35 Identities = 73/153 (47%), Positives = 108/153 (70%) Frame = +2 Query: 227 SALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 406 S ++ET +VP+V++EDIGGL+ ++++E ++ P+ HPE FEK G+ P KGVL GPPG Sbjct: 166 SEIKET--KVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPG 223 Query: 407 CGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDS 586 GKTLLAKA+ANE ANF I GPE+++ + GE+E N+R+IF++A +AP ++F DE+D+ Sbjct: 224 TGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDA 283 Query: 587 IATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 IA +R R++ QLLT MDG+ + Sbjct: 284 IAPKR---DEATGEVERRLVAQLLTLMDGLKGR 313 Score = 34.7 bits (78), Expect = 0.28 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKM 124 T GY GAD+ ALC EAA+ +RE + Sbjct: 652 TEGYTGADIEALCREAAMLAVRESI 676
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 239 bits (609), Expect = 7e-63 Identities = 116/209 (55%), Positives = 153/209 (73%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 T+G+VGADL ALC EAA+ +R + ID+E E I AE++ ++ VT + F AL PS Sbjct: 381 TNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVIENLKVTREDFMEALKNIEPS 440 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 A+RE +VEVPNV WEDIGGLE+ K+EL E V++P+++PE F + P +G+L +GPPG Sbjct: 441 AMREVLVEVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGT 500 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKA+ANE ANFIS+KGPELL+ W GESE +VRE+F KAR APCV+FFDE+DS+ Sbjct: 501 GKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSL 560 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGM 676 A +R RV++QLLTE+DG+ Sbjct: 561 APRR--GGIGDSHVTERVVSQLLTELDGL 587 Score = 152 bits (383), Expect = 1e-36 Identities = 72/144 (50%), Positives = 105/144 (72%) Frame = +2 Query: 254 VPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 433 VP+V++EDIGGL+ R ++E ++ P++HPE F++ G+ P KGVL YGPPG GKTL+AKA Sbjct: 176 VPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKA 235 Query: 434 IANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXX 613 +ANE A+FI I GPE+++ ++GESE +REIF++A+ +AP ++F DE+DSIA +R Sbjct: 236 VANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKR---E 292 Query: 614 XXXXXXXXRVLNQLLTEMDGMNAK 685 RV+ QLL MDG+ A+ Sbjct: 293 EVTGEVERRVVAQLLALMDGLEAR 316 Score = 42.0 bits (97), Expect = 0.002 Identities = 24/66 (36%), Positives = 33/66 (50%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 T GY GAD+ A+C EA + IRE + +E E + +T HF+ AL PS Sbjct: 655 TEGYSGADIEAVCREAGMLAIRELIKPGMTREEA--KEAAKKLKITKKHFEEALKKVRPS 712 Query: 230 ALRETV 247 +E V Sbjct: 713 LTKEDV 718
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 233 bits (593), Expect = 5e-61 Identities = 118/209 (56%), Positives = 151/209 (72%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 T+G+VGADLAAL E+A+ +R + IDL D+ I EIL M VT D FK AL + PS Sbjct: 394 TYGFVGADLAALVRESAMNALRRYLPEIDL-DKPIPTEILEKMVVTEDDFKNALKSIEPS 452 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 +LRE +VEVPNV W+DIGGLE+VKRE++ETV+ P+ P+ F++ G+ PSKG L YGPPG Sbjct: 453 SLREVMVEVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGV 512 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKA+A E ANFISIKGPE+L+ W GESE +REIF KA+ AP ++F DE+DSI Sbjct: 513 GKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSI 572 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGM 676 A +R R++NQLLT +DG+ Sbjct: 573 APRR--GTTSDSGVTERIVNQLLTSLDGI 599 Score = 153 bits (386), Expect = 5e-37 Identities = 73/149 (48%), Positives = 105/149 (70%) Frame = +2 Query: 239 ETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 418 E + EV +S+EDIGGL +++E ++ P++HPE FE+ G++P KGV+ YGPPG GKT Sbjct: 179 EVLEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKT 238 Query: 419 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQ 598 L+A+A+ANE ANF+SI GPE+++ ++G+SE +REIF KA +AP ++F DE+DSIA + Sbjct: 239 LIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPK 298 Query: 599 RXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 R RV+ QLLT MDGM + Sbjct: 299 R---EEVQGEVERRVVAQLLTLMDGMKER 324 Score = 37.4 bits (85), Expect = 0.043 Identities = 27/93 (29%), Positives = 39/93 (41%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 T GYVGADL LC EA + RE D + +V+ +F AL T PS Sbjct: 667 TEGYVGADLENLCREAGMNAYRENPD---------------ATSVSQKNFLDALKTIRPS 711 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQY 328 E + +S + +++LQ+ Y Sbjct: 712 VDEEVIKFYRTLSETMSKSVSERRKQLQDQGLY 744
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 229 bits (585), Expect = 5e-60 Identities = 106/187 (56%), Positives = 140/187 (74%) Frame = +2 Query: 125 DIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVVEVPNVSWEDIGGLENVKR 304 D +D + I A ILN + + HF+ AL NPS+LRE V++P V+W DIGG+ VK Sbjct: 885 DKLDKNERRIPAYILNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKE 944 Query: 305 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 484 +L+ET+ YP+E+ + KF + +KG+L YGPPGCGKTLLAKAIANEC+ANFIS+KGPEL Sbjct: 945 QLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPEL 1004 Query: 485 LTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTE 664 LTMWFGESEANVR++FDKAR ++PC++FFDE+DS+A +R RV+NQ+LTE Sbjct: 1005 LTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER--NSNTNNDASDRVINQILTE 1062 Query: 665 MDGMNAK 685 +DG+N K Sbjct: 1063 IDGINEK 1069 Score = 123 bits (309), Expect = 5e-28 Identities = 61/139 (43%), Positives = 91/139 (65%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 ++++ED+GG++ +++E ++ P+++PE F G+S KGVL +G PG GKT +AKAIA Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582 Query: 440 NECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXX 619 NE A I GPE+++ GESE +R+IF KA PC++F DE+DSIA +R Sbjct: 583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKR---SKS 639 Query: 620 XXXXXXRVLNQLLTEMDGM 676 RV++QLLT MDG+ Sbjct: 640 NNELEKRVVSQLLTLMDGL 658 Score = 50.4 bits (119), Expect = 5e-06 Identities = 21/32 (65%), Positives = 27/32 (84%) Frame = +2 Query: 53 HGYVGADLAALCTEAALQCIREKMDIIDLEDE 148 HGYVGADLA LC EAA+QCI+E + +DL++E Sbjct: 727 HGYVGADLAQLCFEAAIQCIKEHIHFLDLDEE 758
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 221 bits (563), Expect = 2e-57 Identities = 106/217 (48%), Positives = 149/217 (68%) Frame = +2 Query: 26 NWNIFQXXTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKT 205 N + THG+VGAD+ +L EAA++ +R + IDL++E I +++ M V + FK Sbjct: 380 NLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLIDRMIVKREDFKG 439 Query: 206 ALTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGV 385 AL+ PSA+RE +VE+P ++W+D+GGL K ++E+V++P+ PEKF + G+ P GV Sbjct: 440 ALSEVEPSAMREVLVELPKITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGV 499 Query: 386 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVL 565 L YGPPG GKTL+AKA+ANE ANFIS++GP+LL+ W GESE +R+ F KAR AP V+ Sbjct: 500 LLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVI 559 Query: 566 FFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGM 676 FFDELDS+A R RV+NQLLTE+DG+ Sbjct: 560 FFDELDSLAPGR--GQTGGNNVSERVVNQLLTELDGL 594 Score = 147 bits (370), Expect = 4e-35 Identities = 70/141 (49%), Positives = 101/141 (71%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 +++EDIGGLEN + ++E V+ P++HP+ F+K G+ P +GVL +GPPG GKTLLAKA+AN Sbjct: 186 ITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E A+F SI GPE+++ ++GESE +REIF+ A+ +P ++F DELDSIA +R Sbjct: 246 ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKR---EDVT 302 Query: 623 XXXXXRVLNQLLTEMDGMNAK 685 RV+ QLLT MDG+ + Sbjct: 303 GEVERRVVAQLLTMMDGLEGR 323 Score = 31.2 bits (69), Expect = 3.1 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = +2 Query: 56 GYVGADLAALCTEAALQCIREKMDIIDL 139 GYVG+DLA + EAA++ +R+ D D+ Sbjct: 664 GYVGSDLANIAREAAIEALRDDEDADDV 691
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 220 bits (560), Expect = 4e-57 Identities = 111/211 (52%), Positives = 149/211 (70%), Gaps = 2/211 (0%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDI--IDLEDETIDAEILNSMAVTNDHFKTALTTSN 223 T+GY GADLAAL EAA+ +R +D ++L+ TI AEI+ + V+ + F AL + Sbjct: 411 TYGYTGADLAALAKEAAIYALRRFVDEKKLNLDQPTIPAEIIKELKVSMNDFLNALKSIQ 470 Query: 224 PSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPP 403 PS LRE VEVP V+W DIGGL+NVK++L+E V++P+ PE F K G++P KG+L +GPP Sbjct: 471 PSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPP 530 Query: 404 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELD 583 G GKT+LAKA+A E ANFI+++GPE+L+ W GESE +REIF KAR +AP V+FFDE+D Sbjct: 531 GTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEID 590 Query: 584 SIATQRXXXXXXXXXXXXRVLNQLLTEMDGM 676 SIA R R++NQLL EMDG+ Sbjct: 591 SIAPIR--GLSTDSGVTERIVNQLLAEMDGI 619 Score = 155 bits (392), Expect = 1e-37 Identities = 72/151 (47%), Positives = 107/151 (70%) Frame = +2 Query: 233 LRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 412 ++E+ + P VSWEDIG LE K++++E V++P+ HPE F++ G+ P KG+L YGPPG G Sbjct: 199 VKESSLAYPKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTG 258 Query: 413 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA 592 KTLLA+A+ANE A FI++ GPE+++ ++GESE +REIF +A +AP ++F DE+D+IA Sbjct: 259 KTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIA 318 Query: 593 TQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 +R RV+ QLLT MDG+ + Sbjct: 319 PKR---EDVTGEVEKRVVAQLLTLMDGIKGR 346 Score = 32.0 bits (71), Expect = 1.8 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 5/94 (5%) Frame = +2 Query: 56 GYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSAL 235 GY GADL AL EA + +R I + D+ E +M H K + ++ Sbjct: 689 GYTGADLEALVREATINAMR---SIYSMCDKQSRDECKGNMECYQKHIKECMNKTSFKVS 745 Query: 236 RETVVEVPNV-----SWEDIGGLENVKRELQETV 322 +E + NV + DI E +EL+ + Sbjct: 746 KEDFEKALNVVKASLTQADIQRYERFSKELKRAI 779
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 186 bits (472), Expect = 6e-47 Identities = 103/253 (40%), Positives = 144/253 (56%), Gaps = 41/253 (16%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCI-----------REKMDIIDL------------------- 139 T G+VGADL ALC EAA+ + ++ ++ DL Sbjct: 466 TPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQ 525 Query: 140 -----------EDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVVEVPNVSWEDIGG 286 + + + E + + + + F AL++ PSA RE V VPNV+W DIG Sbjct: 526 DELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGA 585 Query: 287 LENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS 466 LE+++ EL + PV +P++F+ G+ GVL GPPGCGKTLLAKA+ANE NFIS Sbjct: 586 LEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFIS 645 Query: 467 IKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVL 646 +KGPELL M+ GESE VR++F +A+ SAPCV+FFDE+D++ +R RV+ Sbjct: 646 VKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRR---SDRETGASVRVV 702 Query: 647 NQLLTEMDGMNAK 685 NQLLTEMDG+ A+ Sbjct: 703 NQLLTEMDGLEAR 715 Score = 115 bits (287), Expect = 2e-25 Identities = 57/143 (39%), Positives = 90/143 (62%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 ++ NV +ED+GG + +E+ + + + + HPE + G+ P +GVL +GPPGCGKTLLA Sbjct: 258 QISNVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAH 316 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX 610 AIA E + + PE+++ GESE +RE+F++A +APC++F DE+D+I +R Sbjct: 317 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR--- 373 Query: 611 XXXXXXXXXRVLNQLLTEMDGMN 679 R++ QLLT MD +N Sbjct: 374 EVASKDMERRIVAQLLTCMDDLN 396
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 182 bits (462), Expect = 8e-46 Identities = 103/253 (40%), Positives = 139/253 (54%), Gaps = 41/253 (16%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCI-----------REKMDIIDLEDE---------------- 148 T G+VGADL ALC EAA+ + ++K +I L E Sbjct: 465 TPGFVGADLMALCREAAMCAVNRVLMKQQAQQKKKPEIEGLPSEGDQEERLGAEPTSETQ 524 Query: 149 --------------TIDAEILNSMAVTNDHFKTALTTSNPSALRETVVEVPNVSWEDIGG 286 + E + + + + F AL PSA RE V VPNV+W DIG Sbjct: 525 DELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGA 584 Query: 287 LENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS 466 LE+++ EL + PV +P++F G+ G+L GPPGCGKTLLAKA+ANE NFIS Sbjct: 585 LEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFIS 644 Query: 467 IKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVL 646 +KGPELL M+ GESE VR++F +A+ SAPCV+FFDE+D++ +R RV+ Sbjct: 645 VKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRR---SDRETGASVRVV 701 Query: 647 NQLLTEMDGMNAK 685 NQLLTEMDG+ + Sbjct: 702 NQLLTEMDGLETR 714 Score = 120 bits (301), Expect = 4e-27 Identities = 60/148 (40%), Positives = 94/148 (63%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 R T +++ NV +ED+GG + +E+ + + + + HPE ++ G+ P +GVL +GPPGCGK Sbjct: 252 RSTELQISNVKFEDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGK 310 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 TLLA AIA E + + PE+++ GESE +RE+FD+A +APC++F DE+D+I Sbjct: 311 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITP 370 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 +R R++ QLLT MD +N Sbjct: 371 KR---EVASKDMERRIVAQLLTCMDDLN 395
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 182 bits (461), Expect = 1e-45 Identities = 94/209 (44%), Positives = 130/209 (62%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 THGYVGADL ALC E+ ++ I+ + D ID S+ VT ++A+ PS Sbjct: 449 THGYVGADLTALCRESVMKTIQRGLGT----DANIDKF---SLKVTLKDVESAMVDIRPS 501 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 A+RE +E+P V W DIGG E +K +++E +Q P+E E F + G+S KGVL YGPPGC Sbjct: 502 AMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGC 561 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 KTL AKA+A E NF+++KGPE+ + GESE +REIF KAR +AP ++FFDE+D++ Sbjct: 562 SKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDAL 621 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGM 676 + R VL LL E+DG+ Sbjct: 622 SPDR---DGSSTSAANHVLTSLLNEIDGV 647 Score = 117 bits (293), Expect = 3e-26 Identities = 56/140 (40%), Positives = 87/140 (62%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 +S+ +GGL+ L+ ++ P+ P F FG+SP +G+L +GPPG GKT+L + +AN Sbjct: 242 LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVAN 301 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 A+ ++I GP +++ + GE+EA +R+IF++AR P ++F DE+DSIA R Sbjct: 302 TSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNR--ANDDS 359 Query: 623 XXXXXRVLNQLLTEMDGMNA 682 RV+ LLT MDGM A Sbjct: 360 GEVESRVVATLLTLMDGMGA 379 Score = 33.1 bits (74), Expect = 0.81 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLE 142 T GY GA++ LC EA L I E +D+ +E Sbjct: 716 TEGYSGAEVVLLCQEAGLAAIMEDLDVAKVE 746
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 180 bits (457), Expect = 3e-45 Identities = 87/178 (48%), Positives = 121/178 (67%) Frame = +2 Query: 146 ETIDAEILNSMAVTNDHFKTALTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQ 325 E + E L+ +++ + F AL T P+A RE VP+V+W ++G L+ V+ EL + Sbjct: 491 EPLSGEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIV 550 Query: 326 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 505 P++ PE +EK G+S GVL +GPPGCGKTLLAKA+ANE +ANFISIKGPELL + GE Sbjct: 551 QPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGE 610 Query: 506 SEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 SE ++R++F +AR S PCV+FFDELD++ +R RV+N LLTE+DG+N Sbjct: 611 SERSIRQVFTRARASVPCVIFFDELDALVPRR---DTSLSESSSRVVNTLLTELDGLN 665 Score = 128 bits (322), Expect = 1e-29 Identities = 62/138 (44%), Positives = 89/138 (64%) Frame = +2 Query: 257 PNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 436 PN S + +GG+++V +L E + P+ HPE F G+ P +GVL +GPPGCGKT +A A+ Sbjct: 200 PNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANAL 259 Query: 437 ANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXX 616 A E Q FISI P +++ GESE +R++FD+AR APC++FFDE+D+I +R Sbjct: 260 AGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKR--DGG 317 Query: 617 XXXXXXXRVLNQLLTEMD 670 R++ QLLT MD Sbjct: 318 AQREMERRIVAQLLTSMD 335
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 175 bits (443), Expect = 1e-43 Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 1/209 (0%) Frame = +2 Query: 53 HGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSA 232 +GYVGADL ALC EA + + D S+ +T+ FK A + PS Sbjct: 228 NGYVGADLEALCREATISASKRSSD---------------SLILTSQDFKIAKSVVGPSI 272 Query: 233 LRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 412 R VE+P V+W+D+GGL+++K++LQ+ V++P++H F K G+SP +G+L +GPPGC Sbjct: 273 NRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCS 332 Query: 413 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA 592 KT LAKA AN QA+F S+ EL +M+ GE EA +R F +AR ++P ++FFDE D +A Sbjct: 333 KTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVA 392 Query: 593 TQR-XXXXXXXXXXXXRVLNQLLTEMDGM 676 +R R+L+ LLTEMDG+ Sbjct: 393 CKRGDESSSNSSTVGERLLSTLLTEMDGL 421 Score = 81.3 bits (199), Expect = 3e-15 Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 7/144 (4%) Frame = +2 Query: 260 NVSWE---DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 N W +IGG E + L+E + +P +P + G+ +G+L YGPPG GKT L + Sbjct: 15 NEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVR 74 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSA----PCVLFFDELDSIATQ 598 A+ EC A+ I + + GESE +RE F +A A P V+F DE+D + + Sbjct: 75 AVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPR 134 Query: 599 RXXXXXXXXXXXXRVLNQLLTEMD 670 R R+ +QL T MD Sbjct: 135 R----DARREQDVRIASQLFTLMD 154
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 171 bits (433), Expect = 2e-42 Identities = 84/143 (58%), Positives = 103/143 (72%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 ++PNV W+D+GGL NVK L ET+Q P+E PE F K GM G+LFYGPPG GKTLLAK Sbjct: 1023 KIPNVGWDDVGGLTNVKDALVETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAK 1081 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX 610 AIA E NF S+KGPELL M+ GESEANVR +F +AR + PCV+FFDELDS+A +R Sbjct: 1082 AIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKR-GN 1140 Query: 611 XXXXXXXXXRVLNQLLTEMDGMN 679 R+++QLL E+DGMN Sbjct: 1141 QGDSGGVMDRIVSQLLAELDGMN 1163 Score = 31.2 bits (69), Expect = 3.1 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 8/93 (8%) Frame = +2 Query: 59 YVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALR 238 Y GADL ALC++A L+ I K + DE I+A L + V+ F L T + Sbjct: 1239 YTGADLYALCSDAMLKAITRKATAV---DEKINA--LPNGPVSTAWFFDHLATKEDVNVM 1293 Query: 239 ETVVE--------VPNVSWEDIGGLENVKRELQ 313 T + VP+VS +++ E +++ + Sbjct: 1294 VTEEDFLSAQGELVPSVSAKELEHFERIRQTFE 1326
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 170 bits (430), Expect = 4e-42 Identities = 96/227 (42%), Positives = 130/227 (57%), Gaps = 22/227 (9%) Frame = +2 Query: 65 GADLAALCTEAALQCIREKMDIID--LEDETIDAEILNSMAVTNDHFKTALTTSNPSALR 238 G DL+ + + A + +D++D L + E L + A + F+ P+A Sbjct: 900 GVDLSGIALKTAALVAGDLVDVVDRALVAQRSRLEKLTAKATGSITFRDVQLAGGPAASG 959 Query: 239 ET--------------------VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEK 358 T ++PNV+W+D+GGL NVK + ET+Q P+E PE F K Sbjct: 960 LTKQDFELAVDAARKNFADSIGAPKIPNVTWDDVGGLGNVKDAITETIQLPLERPELFAK 1019 Query: 359 FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDK 538 GM G+LFYGPPG GKTLLAKAIA E NF S+KGPELL M+ GESEANVR +F + Sbjct: 1020 -GMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQR 1078 Query: 539 ARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 AR + PCV+FFDELDS+A +R R+++QLL E+DGM+ Sbjct: 1079 ARDARPCVVFFDELDSVAPKR-GNQGDSGGVMDRIVSQLLAELDGMS 1124
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 169 bits (428), Expect = 7e-42 Identities = 82/143 (57%), Positives = 104/143 (72%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 ++PNV+W+D+GGL NVK + ET+Q P+E PE F K GM G+LFYGPPG GKTLLAK Sbjct: 987 KIPNVTWDDVGGLNNVKDAVTETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAK 1045 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX 610 AIA E NF S+KGPELL M+ GESEANVR +F +AR + PCV+FFDELDS+A +R Sbjct: 1046 AIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKR-GN 1104 Query: 611 XXXXXXXXXRVLNQLLTEMDGMN 679 R+++QLL E+DGM+ Sbjct: 1105 QGDSGGVMDRIVSQLLAELDGMS 1127 Score = 31.6 bits (70), Expect = 2.4 Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 20/156 (12%) Frame = +2 Query: 32 NIFQXXTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILN-----SMAVTNDH 196 ++ Q Y GAD ALC++A L+ + + +D + ++A+ + S A DH Sbjct: 1194 SVAQQLPFTYTGADFYALCSDAMLKAVTRQAASVDAKIRELEAQPRSRTGPISTAYFFDH 1253 Query: 197 FKT----ALTTSNPSALRETVVEVPNVSWEDIGGLENV-----------KRELQETVQYP 331 T A+ + L VP+VS ++ E V +++ Q+ Q P Sbjct: 1254 HATPEDIAVMVTEEDFLAANRELVPSVSAGELSHYEQVRAMFEGPPEKDRQQQQQQQQRP 1313 Query: 332 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 +S KG G G GK KA+A Sbjct: 1314 SGLRAVSGSSVVSKGKGKAIAGGSGKGK---GKAVA 1346
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 166 bits (421), Expect = 5e-41 Identities = 79/144 (54%), Positives = 105/144 (72%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 ++PNV+W+DIGG++ VK E+ +T+ P++HPE F GM G+LFYGPPG GKTLLAK Sbjct: 695 KIPNVTWDDIGGMDVVKGEIMDTIDMPLKHPELFSS-GMKKRSGILFYGPPGTGKTLLAK 753 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX 610 AIA+ NF S+KGPELL M+ GESEANVR +F KAR + PCV+FFDELDS+A +R Sbjct: 754 AIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKR-GN 812 Query: 611 XXXXXXXXXRVLNQLLTEMDGMNA 682 R+++QLL E+DGM++ Sbjct: 813 QGDSGGVMDRIVSQLLAELDGMSS 836
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 166 bits (420), Expect = 6e-41 Identities = 91/198 (45%), Positives = 121/198 (61%), Gaps = 5/198 (2%) Frame = +2 Query: 101 LQCIREKM-----DIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVVEVPNV 265 L+C+ + M D I D+ IL+ +T ++ T+ VP V Sbjct: 594 LECLPDHMTKAAVDRIKRTGYDNDSIILSGPIITEQDVDVSINRIRKEK-SNTIFTVPKV 652 Query: 266 SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 445 +W+DIGGLE K L++T+Q P++ PE F + G+ P GVL YGPPG GKTLLAKA+A E Sbjct: 653 NWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATE 711 Query: 446 CQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXX 625 F+SIKGPELL M+ GESEANVR +F+KAR S+PCV+FFDELDSIA R Sbjct: 712 LSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHR-GNSSDSG 770 Query: 626 XXXXRVLNQLLTEMDGMN 679 RV++QLL E+D ++ Sbjct: 771 NVMDRVVSQLLAELDSIS 788 Score = 32.0 bits (71), Expect = 1.8 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 13/70 (18%) Frame = +2 Query: 59 YVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILN-------------SMAVTNDHF 199 + GAD+ ALC++A L I+ K + IDL + ++ + +T + F Sbjct: 862 FTGADMYALCSDAVLSAIKRKTNEIDLLIQASGTDLSTEEFFKRNENQDSLELRITKEDF 921 Query: 200 KTALTTSNPS 229 T+L PS Sbjct: 922 LTSLKKLRPS 931
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 166 bits (420), Expect = 6e-41 Identities = 80/142 (56%), Positives = 103/142 (72%) Frame = +2 Query: 254 VPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 433 +P+V WED+GGL+ VK E+ +T++ P++HPE F K GM G+LFYGPPG GKTLLAKA Sbjct: 807 IPDVKWEDVGGLDVVKDEILDTIEMPLKHPELFSK-GMKKRSGILFYGPPGTGKTLLAKA 865 Query: 434 IANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXX 613 IA NF S+KGPELL M+ GESEANVR +F KAR + PCV+FFDELDS+A +R Sbjct: 866 IATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKR-GNQ 924 Query: 614 XXXXXXXXRVLNQLLTEMDGMN 679 R+++QLL E+DGM+ Sbjct: 925 GDSGGVMDRIVSQLLAELDGMS 946
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 166 bits (419), Expect = 8e-41 Identities = 93/213 (43%), Positives = 134/213 (62%), Gaps = 4/213 (1%) Frame = +2 Query: 56 GYVGADLAALCTEAA-LQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALT---TSN 223 G+V DL AL T A+ C R K + + +E + + F AL T++ Sbjct: 629 GFVVGDLYALLTHASRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQLQTAH 688 Query: 224 PSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPP 403 A+ ++P+VSW D+GGL++VK+E+ ET+Q P+EHPE G+ S G+L +GPP Sbjct: 689 SQAVGAP--KIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPP 744 Query: 404 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELD 583 G GKTLLAKA+A EC F+S+KGPEL+ M+ G+SE NVRE+F +AR +APC++FFDELD Sbjct: 745 GTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELD 804 Query: 584 SIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNA 682 S+A R RV++QLL E+DG+++ Sbjct: 805 SLAPSR-GRSGDSGGVMDRVVSQLLAELDGLHS 836 Score = 35.4 bits (80), Expect = 0.16 Identities = 21/73 (28%), Positives = 29/73 (39%) Frame = +2 Query: 383 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCV 562 VL GPPG GKT A + + + + L E ++ F +AR P V Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525 Query: 563 LFFDELDSIATQR 601 L LD + R Sbjct: 526 LLLTALDLLGRDR 538
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 164 bits (414), Expect = 3e-40 Identities = 79/142 (55%), Positives = 101/142 (71%) Frame = +2 Query: 254 VPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 433 +P+V WEDIGGL+ VK E+ +T+ P++HPE F G+ G+LFYGPPG GKTLLAKA Sbjct: 833 IPDVKWEDIGGLDLVKDEIMDTIDMPLKHPELFSN-GLKKRSGILFYGPPGTGKTLLAKA 891 Query: 434 IANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXX 613 IA NF S+KGPELL M+ GESEANVR +F KAR + PCV+FFDELDS+A +R Sbjct: 892 IATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKR-GNQ 950 Query: 614 XXXXXXXXRVLNQLLTEMDGMN 679 R+++QLL E+DGM+ Sbjct: 951 GDSGGVMDRIVSQLLAELDGMS 972
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 163 bits (413), Expect = 4e-40 Identities = 81/170 (47%), Positives = 114/170 (67%), Gaps = 1/170 (0%) Frame = +2 Query: 173 SMAVTNDHFKTALTTS-NPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEK 349 S+ +T + A + + N ++ ++PNV+W+DIGG++ VK E+ +T+ P++HPE Sbjct: 698 SILITQEDLSKATSKARNEFSVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDMPLKHPEL 757 Query: 350 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI 529 F GM G+LFYGPPG GKTL+AKAIA NF S+KGPELL M+ GESEANVR + Sbjct: 758 FTS-GMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRV 816 Query: 530 FDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 F KAR + PCV+FFDE+DS+A +R R+++QLL E+DGM+ Sbjct: 817 FQKAREAKPCVIFFDEIDSVAPKR-GNQGDSGGVMDRIVSQLLAELDGMS 865
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 163 bits (412), Expect = 5e-40 Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Frame = +2 Query: 56 GYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNS---MAVTNDHFKTALTTSNP 226 G DL A+ L+ I + D T+D + S + +T F A+ + Sbjct: 643 GLTPPDLTAIVQTTRLRAIDRLNKLTKDSDTTLDDLLTLSHGTLQLTPSDFDDAIADARQ 702 Query: 227 SALRET-VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPP 403 +PNV W+D+GG+E VK+++ +T++ P+++P F G+ G+LFYGPP Sbjct: 703 KYSDSIGAPRIPNVGWDDVGGMEGVKKDILDTIETPLKYPHWFSD-GVKKRSGILFYGPP 761 Query: 404 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELD 583 G GKTLLAKAIA NF S+KGPELL M+ GESEANVR +F KAR + PCV+FFDELD Sbjct: 762 GTGKTLLAKAIATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELD 821 Query: 584 SIATQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 S+A QR R+++QLL E+DGM+ Sbjct: 822 SVAPQR-GNQGDSGGVMDRIVSQLLAELDGMS 852 Score = 34.3 bits (77), Expect = 0.36 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = +2 Query: 404 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELD 583 G GK+ + +++A +C + I L+ ++ +R D+A G +PCV+ L+ Sbjct: 480 GVGKSTVLRSVAAQCGISVFEISCFGLIGDNEAQTLGTLRAKLDRAYGCSPCVVVLQHLE 539 Query: 584 SIA 592 SIA Sbjct: 540 SIA 542
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 162 bits (411), Expect = 7e-40 Identities = 78/142 (54%), Positives = 102/142 (71%) Frame = +2 Query: 254 VPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 433 +PNV WED+GGL+ VK E+ +T+ P++HPE F G+ G+LFYGPPG GKTLLAKA Sbjct: 813 IPNVKWEDVGGLDVVKDEILDTIDMPMKHPELFSN-GIKKRSGILFYGPPGTGKTLLAKA 871 Query: 434 IANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXX 613 IA NF S+KGPELL M+ GESEANVR++F +AR + PCV+FFDELDS+A +R Sbjct: 872 IATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARDAKPCVVFFDELDSVAPKR-GNQ 930 Query: 614 XXXXXXXXRVLNQLLTEMDGMN 679 R+++QLL E+DGM+ Sbjct: 931 GDSEGVMDRIVSQLLAELDGMS 952
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 162 bits (411), Expect = 7e-40 Identities = 77/143 (53%), Positives = 102/143 (71%) Frame = +2 Query: 254 VPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 433 +PNV+W+D+GGL +VK + ET+ P++HPE F G+ G+LFYGPPG GKTLLAKA Sbjct: 712 IPNVTWDDVGGLSSVKDAIMETIDLPLKHPELFGS-GLKKRSGILFYGPPGTGKTLLAKA 770 Query: 434 IANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXX 613 IA NF S+KGPELL M+ GESEANVR +F KAR + PCV+FFDE+DS+A +R Sbjct: 771 IATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSVAPKR-GNQ 829 Query: 614 XXXXXXXXRVLNQLLTEMDGMNA 682 R+++QLL E+DGM++ Sbjct: 830 GDSGGVMDRIVSQLLAELDGMSS 852
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 162 bits (410), Expect = 9e-40 Identities = 94/215 (43%), Positives = 132/215 (61%), Gaps = 6/215 (2%) Frame = +2 Query: 56 GYVGADLAALCTE---AALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALT---T 217 G+V DL AL T AA IR L +E + + + F AL T Sbjct: 630 GFVVGDLYALLTHTCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQLQT 689 Query: 218 SNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG 397 ++ A+ +P+VSW D+GGL++VK+E+ ET+Q P+EHPE G+ S G+L +G Sbjct: 690 AHSQAVGAP--RIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHG 745 Query: 398 PPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDE 577 PPG GKTLLAKA+A EC F+S+KGPEL+ M+ G+SE NVRE+F +AR +APC++FFDE Sbjct: 746 PPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDE 805 Query: 578 LDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNA 682 LDS+A R RV++QLL E+DG+++ Sbjct: 806 LDSLAPSR-GRSGDSGGVMDRVVSQLLAELDGLHS 839 Score = 34.7 bits (78), Expect = 0.28 Identities = 20/73 (27%), Positives = 29/73 (39%) Frame = +2 Query: 383 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCV 562 VL GPPG GKT A + + + + L E ++ F +AR P V Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAV 526 Query: 563 LFFDELDSIATQR 601 L +D + R Sbjct: 527 LLLTAVDLLGRDR 539
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 160 bits (406), Expect = 3e-39 Identities = 78/143 (54%), Positives = 101/143 (70%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 ++PNV WEDIGGLE VK E+ +T+ P++ PE F GM G+LFYGPPG GKTLLAK Sbjct: 716 KIPNVFWEDIGGLEMVKGEILDTIDMPLKFPELFAS-GMKKRSGILFYGPPGTGKTLLAK 774 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX 610 A+A NF S+KGPELL M+ GESEANVR +F +AR + PCV+FFDELDS+A +R Sbjct: 775 AVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKR-GN 833 Query: 611 XXXXXXXXXRVLNQLLTEMDGMN 679 R+++QLL E+DG++ Sbjct: 834 QGDSGGVMDRIVSQLLAELDGLS 856
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 160 bits (405), Expect = 3e-39 Identities = 76/144 (52%), Positives = 106/144 (73%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 ++P+VSW D+GGL+ VK+E+ ET+Q P+EHPE G+ S G+L +GPPG GKTLLAK Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAK 755 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX 610 A+A EC F+S+KGPEL+ M+ G+SE NVRE+F +AR +APC++FFDELDS+A R Sbjct: 756 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR-GR 814 Query: 611 XXXXXXXXXRVLNQLLTEMDGMNA 682 RV++QLL E+DG+++ Sbjct: 815 SGDSGGVMDRVVSQLLAELDGLHS 838 Score = 46.6 bits (109), Expect = 7e-05 Identities = 29/106 (27%), Positives = 44/106 (41%) Frame = +2 Query: 365 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 544 ++ + VL GPPGCGKT + A + + + + L G E ++ IF +AR Sbjct: 460 LTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRAR 519 Query: 545 GSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNA 682 P VL +D + R VL LL D +N+ Sbjct: 520 RCRPAVLLLTAVDLLGRDRDGLGEDARVMA--VLRHLLLNEDPLNS 563
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 154 bits (390), Expect = 2e-37 Identities = 87/220 (39%), Positives = 124/220 (56%), Gaps = 12/220 (5%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDII------DLEDETI------DAEILNSMAVTND 193 T G+VGADL ++ A + I+ +D D ED+ E L + V Sbjct: 442 TPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGEDDKSWLRMPWPEEELEKLFVKMS 501 Query: 194 HFKTALTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 373 F+ A+ S RE VP+V W+D+GGL++++ + + P++ P+ ++ FG+ Sbjct: 502 DFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDL 561 Query: 374 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSA 553 G L YGPPGCGKTL+AKA ANE ANF+ IKG ELL + GESE +R +F +AR A Sbjct: 562 ETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCA 621 Query: 554 PCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDG 673 PCV+FFDE+D++ T R R+LNQ L E+DG Sbjct: 622 PCVIFFDEVDALTTSR---GKEGAWVVERLLNQFLVELDG 658 Score = 122 bits (305), Expect = 1e-27 Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Frame = +2 Query: 134 DLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVVEVPNV---SWEDIGGLENVKR 304 ++E ET+ + + +A + ++ S A +EV +++D GG++ + Sbjct: 184 NVEVETVSNKGRSKLATMGARKEAKVSLSLSGATGNGDLEVEGTKGPTFKDFGGIKKILD 243 Query: 305 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 484 EL+ V +P+ +PE F+K G+ P G+LF+GPPGCGKT LA AIANE F I E+ Sbjct: 244 ELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEV 303 Query: 485 LTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTE 664 ++ G SE N+RE+F KA +AP ++F DE+D+I ++R R++ QLLT Sbjct: 304 ISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKR---ENQQREMEKRIVTQLLTC 360 Query: 665 MDGMNAK 685 MDG K Sbjct: 361 MDGPGNK 367
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 152 bits (385), Expect = 7e-37 Identities = 75/164 (45%), Positives = 107/164 (65%) Frame = +2 Query: 182 VTNDHFKTALTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKF 361 + D+F +AL+ P +LR ++ +V W+DIGGL + K L ET+++P ++ F Sbjct: 769 IQKDNFDSALSGYIPQSLRGVKLQKSDVRWDDIGGLRDAKSILLETLEWPTKYAPIFSSC 828 Query: 362 GMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 541 + G+L YG PGCGKTLLA A+A +C NFISIKGPE+L + G SE +VRE+F++A Sbjct: 829 PLRLRSGILLYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERA 888 Query: 542 RGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDG 673 + + PC+LFFDE DSIA +R RV+NQ+LT+MDG Sbjct: 889 QAAKPCILFFDEFDSIAPKR---GHDSTGVTDRVVNQMLTQMDG 929 Score = 37.7 bits (86), Expect = 0.033 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%) Frame = +2 Query: 323 QYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN--ECQANFISIKGPELLTMW 496 QYP E S G L +G G GK+L+ +A + +F+ + + + Sbjct: 499 QYPTAQENLIESLSKIASGGSLLFGTSGSGKSLVISQVAQIVTNKGHFVKLLNCDKI--- 555 Query: 497 FGESEANVR----EIFDKARGSAPCVLFFDELDSI 589 ES N+R +IF + AP +L ++LDS+ Sbjct: 556 MSESYNNLRGIFEDIFSEVSWKAPSLLILEDLDSL 590
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 152 bits (384), Expect = 9e-37 Identities = 72/158 (45%), Positives = 103/158 (65%) Frame = +2 Query: 212 TTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 391 T+ +P+ L V+E PNV++ DIGGL+ +EL+E ++ P++HPE FE+ G+ P KGVL Sbjct: 120 TSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLL 179 Query: 392 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFF 571 YGPPGCGKTL+AKA+A+E A FI + G EL+ + GE V E+F+ A+ AP ++F Sbjct: 180 YGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFI 239 Query: 572 DELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 DE+D+I +R R L QLL EMDG + + Sbjct: 240 DEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPR 277 Score = 31.2 bits (69), Expect = 3.1 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLED 145 T G GADL A+ TEA + IRE+ + ED Sbjct: 341 TEGASGADLKAIATEAGMFAIRERRTYVTQED 372
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 151 bits (382), Expect = 2e-36 Identities = 73/157 (46%), Positives = 102/157 (64%) Frame = +2 Query: 215 TSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFY 394 + +P+ L VVE PNV++ DIGGL+ +EL+E ++ P++HPE FE+ G+ P KGVL Y Sbjct: 118 SKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLY 177 Query: 395 GPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFD 574 GPPGCGKTL+AKAIA+E A FI + G EL+ + GE V E+F+ A+ AP ++F D Sbjct: 178 GPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFID 237 Query: 575 ELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 E+D+I +R R L QLL EMDG + + Sbjct: 238 EIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPR 274 Score = 31.2 bits (69), Expect = 3.1 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLED 145 T G GADL A+ TEA + IRE+ + ED Sbjct: 338 TEGASGADLKAIATEAGMFAIRERRTYVTQED 369
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 151 bits (381), Expect = 2e-36 Identities = 77/165 (46%), Positives = 104/165 (63%), Gaps = 1/165 (0%) Frame = +2 Query: 182 VTNDHFKTALTTSNPSALRET-VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEK 358 VT + F +L+ PSALR + + N+ W DIG L N K L ET+++P ++ F Sbjct: 666 VTRELFSKSLSAFTPSALRGVKLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVN 725 Query: 359 FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDK 538 + G+L YG PGCGKTLLA A+A +C NFIS+KGPE+L + G SE N+RE+F++ Sbjct: 726 CPLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFER 785 Query: 539 ARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDG 673 A+ PC+LFFDE DSIA +R RV+NQLLT+MDG Sbjct: 786 AQSVKPCILFFDEFDSIAPKR---GHDSTGVTDRVVNQLLTQMDG 827
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 150 bits (380), Expect = 3e-36 Identities = 71/158 (44%), Positives = 103/158 (65%) Frame = +2 Query: 212 TTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 391 ++ +P+ L V+E PNV++ DIGGL+ +EL+E ++ P++HPE FE+ G+ P KGVL Sbjct: 120 SSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLL 179 Query: 392 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFF 571 YGPPGCGKTL+AKA+A+E A FI + G EL+ + GE V E+F+ A+ AP ++F Sbjct: 180 YGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFI 239 Query: 572 DELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 DE+D+I +R R L QLL EMDG + + Sbjct: 240 DEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPR 277 Score = 31.2 bits (69), Expect = 3.1 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLED 145 T G GADL A+ TEA + IRE+ + ED Sbjct: 341 TEGASGADLKAIATEAGMFAIRERRTYVTQED 372
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 150 bits (379), Expect = 3e-36 Identities = 72/155 (46%), Positives = 99/155 (63%) Frame = +2 Query: 221 NPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 400 +PS L V+E P V++ DIGGLE +EL+E ++ P++HPE FE+ G+ P KGVL YGP Sbjct: 121 DPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGP 180 Query: 401 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDEL 580 PGCGKTL+AKA+AN A FI + G EL+ + GE V E+F+ A+ AP ++F DE+ Sbjct: 181 PGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEI 240 Query: 581 DSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 D+I +R R L QLL EMDG + + Sbjct: 241 DAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPR 275
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 149 bits (376), Expect = 8e-36 Identities = 73/147 (49%), Positives = 97/147 (65%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V E PNV +EDIGGLE +E++E V+ P++HPE FEK G+ P KG+L YGPPG GKTLL Sbjct: 161 VDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLL 220 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 AKA+A E A FI + G EL+ + GE + V++IF A+ AP ++F DE+D+IA +R Sbjct: 221 AKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRT 280 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNAK 685 R L QLL EMDG +A+ Sbjct: 281 DALTGGDREVQRTLMQLLAEMDGFDAR 307 Score = 38.1 bits (87), Expect = 0.025 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLED 145 T G VGA+L A+CTEA + IRE D + ++D Sbjct: 372 TEGCVGAELKAICTEAGMNAIRELRDYVTMDD 403
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 147 bits (371), Expect = 3e-35 Identities = 69/152 (45%), Positives = 102/152 (67%) Frame = +2 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 A+ + E P++S+EDIGGL N R+++E V+ P+++PE FEK G+ P KGVL YGPPG Sbjct: 134 AMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGT 193 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLAKA+A E A+F+ + G EL+ + GE VR++F A+ +PC++F DE+D++ Sbjct: 194 GKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAV 253 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 A++R R L QLL EMDG +++ Sbjct: 254 ASKRTESLTGGDREVQRTLMQLLAEMDGFDSR 285 Score = 35.0 bits (79), Expect = 0.21 Identities = 15/28 (53%), Positives = 21/28 (75%) Frame = +2 Query: 62 VGADLAALCTEAALQCIREKMDIIDLED 145 VGADL A+CTEA + IRE+ + I ++D Sbjct: 353 VGADLKAVCTEAGMFAIREEREFIKMDD 380
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 146 bits (369), Expect = 5e-35 Identities = 72/145 (49%), Positives = 94/145 (64%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V E P+VS++DIGGL+ RE++E V+ P++ PE FEK G+ P KGVL YGPPG GKTLL Sbjct: 170 VDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLL 229 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 AKA+AN A FI + PEL+ + GE VRE+F+ AR AP ++F DE+D+I +R Sbjct: 230 AKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRM 289 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMN 679 R L QLL EMDG + Sbjct: 290 RDATSGDREVQRTLTQLLAEMDGFD 314 Score = 38.9 bits (89), Expect = 0.015 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLED 145 T G GAD+ A+CTEA + IRE DI+ ++D Sbjct: 381 TEGASGADIKAICTEAGMMAIREDRDIVTMDD 412
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 144 bits (364), Expect = 2e-34 Identities = 75/168 (44%), Positives = 107/168 (63%), Gaps = 1/168 (0%) Frame = +2 Query: 176 MAVTNDHFKTALTTSNPSALRETVVEVP-NVSWEDIGGLENVKRELQETVQYPVEHPEKF 352 + +T F+ AL P++LR + P ++ W+ IGGL V++ L +T+Q P ++PE F Sbjct: 807 LVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELF 866 Query: 353 EKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF 532 + G+L YGPPG GKTLLA IA E + NFIS+KGPELL+ + G SE VR+IF Sbjct: 867 ANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIF 926 Query: 533 DKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGM 676 +A+ + PC+LFFDE +SIA +R RV+NQLLT++DG+ Sbjct: 927 IRAQAAKPCILFFDEFESIAPRR---GHDNTGVTDRVVNQLLTQLDGV 971
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 141 bits (355), Expect = 2e-33 Identities = 69/147 (46%), Positives = 94/147 (63%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V E P+VS+E IGGLE RE++ETV+ P++ PE FEK G+ P KGVL YGPPG GKTLL Sbjct: 142 VEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLL 201 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 AKA+A+E A FI I E + + GE VR +F+ A+ +P ++F DE+D++A +R Sbjct: 202 AKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRL 261 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNAK 685 R L QLL E+DG ++ Sbjct: 262 KSSTSGDREVQRTLMQLLAELDGFESR 288 Score = 33.9 bits (76), Expect = 0.47 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLED 145 T G GADL A+CTEA + IR++ D + + D Sbjct: 353 TDGASGADLKAICTEAGMFAIRDERDEVTMAD 384
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 139 bits (350), Expect = 8e-33 Identities = 70/158 (44%), Positives = 96/158 (60%) Frame = +2 Query: 212 TTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 391 T+ +P V E P VS+EDIGGL+ E++E V+ P+ PE F + G+ P KGVL Sbjct: 121 TSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLL 180 Query: 392 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFF 571 YGPPG GKTLLAKA+AN+ +A FI + G E + + GE VRE+F A+ AP ++F Sbjct: 181 YGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFI 240 Query: 572 DELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 DELD+IA +R R + QLL E+DG + + Sbjct: 241 DELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPR 278 Score = 31.6 bits (70), Expect = 2.4 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDET 151 T G GAD+ A+CTEA + IRE+ + + D T Sbjct: 343 TEGASGADIKAICTEAGMFAIREERAKVTMLDFT 376
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 139 bits (349), Expect = 1e-32 Identities = 71/158 (44%), Positives = 94/158 (59%) Frame = +2 Query: 212 TTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 391 +T P V+E V ++ IGGL+ +ELQE V+ P+ PE+F + G+ P KGVL Sbjct: 139 STEEPFVAAMEVIESVEVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLL 198 Query: 392 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFF 571 YG PG GKTLLAKA+A+ A FI + G EL+ + G+ VREIF+ AR AP ++F Sbjct: 199 YGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFI 258 Query: 572 DELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 DELDSIA +R R L QLL EMDG + + Sbjct: 259 DELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKR 296 Score = 32.0 bits (71), Expect = 1.8 Identities = 22/66 (33%), Positives = 33/66 (50%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 T G GADL A+ TEA + +R +++++E E ++A SMA PS Sbjct: 361 TEGMSGADLKAIATEAGMFAVRRDKELVEME-EFLEAVEKVSMAADTQKMM-------PS 412 Query: 230 ALRETV 247 L ET+ Sbjct: 413 NLPETM 418
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 138 bits (347), Expect = 2e-32 Identities = 71/158 (44%), Positives = 94/158 (59%) Frame = +2 Query: 212 TTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 391 +T P V+E V ++ IGGL+ +ELQE V+ P+ PE+F + G+ P KGVL Sbjct: 139 STEEPFVAAMEVIESIEVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLL 198 Query: 392 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFF 571 YG PG GKTLLAKA+A+ A FI + G EL+ + G+ VREIF+ AR AP ++F Sbjct: 199 YGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFI 258 Query: 572 DELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 DELDSIA +R R L QLL EMDG + + Sbjct: 259 DELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKR 296 Score = 32.0 bits (71), Expect = 1.8 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLED 145 T G GADL A+ TEA + +R+ ++++ED Sbjct: 361 TEGMSGADLKAIATEAGMFAVRKDKALVEMED 392
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 138 bits (347), Expect = 2e-32 Identities = 69/189 (36%), Positives = 108/189 (57%), Gaps = 3/189 (1%) Frame = +2 Query: 128 IIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVVEV---PNVSWEDIGGLENV 298 + +L D + ND F + + R +EV P+V++ DIGGL++ Sbjct: 101 LTELSPRLADTLEVGDRVAINDSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDDQ 160 Query: 299 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 478 RE++E V+ P+ +PEKF+ G+ P GVL +GPPG GKT+LAKA+AN+ A+FI + G Sbjct: 161 LREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGS 220 Query: 479 ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLL 658 EL+ + GE VR++F+ A P ++F DE+D++A +R R + QLL Sbjct: 221 ELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKTSGDAEVQRTMMQLL 280 Query: 659 TEMDGMNAK 685 +EMDG + + Sbjct: 281 SEMDGFDER 289
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 137 bits (344), Expect = 4e-32 Identities = 70/174 (40%), Positives = 106/174 (60%), Gaps = 3/174 (1%) Frame = +2 Query: 173 SMAVTNDHFKTALTTSNPSALRETVVEV---PNVSWEDIGGLENVKRELQETVQYPVEHP 343 S N+ + + +R V+EV P+V +EDIGGL++ RE++ETV+ P++ P Sbjct: 113 SRVAVNNSLSVVRQLDDEADVRARVMEVDDSPDVGYEDIGGLDDQLREVRETVELPMKDP 172 Query: 344 EKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR 523 FE G++P GVL +GPPG GKTL+AKA+A++ A+FI + G EL+ + GE VR Sbjct: 173 GLFETVGINPPSGVLLHGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVR 232 Query: 524 EIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 ++F AR P V+F DE+D+IA++R R + QLL+EMDG + + Sbjct: 233 DLFQVARDHEPAVVFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDER 286
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 137 bits (344), Expect = 4e-32 Identities = 72/191 (37%), Positives = 107/191 (56%), Gaps = 5/191 (2%) Frame = +2 Query: 128 IIDLEDETIDAEILNSMAVTNDHFKTALTTS-----NPSALRETVVEVPNVSWEDIGGLE 292 ++ L D+ +I M V D K + +PS TV E P+V++ D+GG + Sbjct: 114 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 173 Query: 293 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 472 +++E V+ P+ HPEKF K G+ P KGVL YGPPG GKTLLA+A+AN A FI + Sbjct: 174 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 233 Query: 473 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQ 652 G EL+ + GE VRE+F AR C++FFDE+D+I R R + + Sbjct: 234 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 293 Query: 653 LLTEMDGMNAK 685 ++ ++DG +A+ Sbjct: 294 IVNQLDGFDAR 304
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 137 bits (344), Expect = 4e-32 Identities = 72/191 (37%), Positives = 107/191 (56%), Gaps = 5/191 (2%) Frame = +2 Query: 128 IIDLEDETIDAEILNSMAVTNDHFKTALTTS-----NPSALRETVVEVPNVSWEDIGGLE 292 ++ L D+ +I M V D K + +PS TV E P+V++ D+GG + Sbjct: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174 Query: 293 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 472 +++E V+ P+ HPEKF K G+ P KGVL YGPPG GKTLLA+A+AN A FI + Sbjct: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234 Query: 473 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQ 652 G EL+ + GE VRE+F AR C++FFDE+D+I R R + + Sbjct: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294 Query: 653 LLTEMDGMNAK 685 ++ ++DG +A+ Sbjct: 295 IVNQLDGFDAR 305
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 137 bits (344), Expect = 4e-32 Identities = 72/191 (37%), Positives = 107/191 (56%), Gaps = 5/191 (2%) Frame = +2 Query: 128 IIDLEDETIDAEILNSMAVTNDHFKTALTTS-----NPSALRETVVEVPNVSWEDIGGLE 292 ++ L D+ +I M V D K + +PS TV E P+V++ D+GG + Sbjct: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174 Query: 293 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 472 +++E V+ P+ HPEKF K G+ P KGVL YGPPG GKTLLA+A+AN A FI + Sbjct: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234 Query: 473 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQ 652 G EL+ + GE VRE+F AR C++FFDE+D+I R R + + Sbjct: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294 Query: 653 LLTEMDGMNAK 685 ++ ++DG +A+ Sbjct: 295 IVNQLDGFDAR 305
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 137 bits (344), Expect = 4e-32 Identities = 72/191 (37%), Positives = 107/191 (56%), Gaps = 5/191 (2%) Frame = +2 Query: 128 IIDLEDETIDAEILNSMAVTNDHFKTALTTS-----NPSALRETVVEVPNVSWEDIGGLE 292 ++ L D+ +I M V D K + +PS TV E P+V++ D+GG + Sbjct: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174 Query: 293 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 472 +++E V+ P+ HPEKF K G+ P KGVL YGPPG GKTLLA+A+AN A FI + Sbjct: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234 Query: 473 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQ 652 G EL+ + GE VRE+F AR C++FFDE+D+I R R + + Sbjct: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294 Query: 653 LLTEMDGMNAK 685 ++ ++DG +A+ Sbjct: 295 IVNQLDGFDAR 305
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 136 bits (343), Expect = 5e-32 Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 6/183 (3%) Frame = +2 Query: 149 TIDAEILN-SMAVTNDHFKTALTTSNPSALRETVV-----EVPNVSWEDIGGLENVKREL 310 T+D E+L SM+V AL P ++ E P+V++ D+GGL+ K+E+ Sbjct: 125 TLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEI 184 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 490 +E V+ P+ + +E+ G+ P +GVL YGPPG GKT+L KA+AN +A FI + G E + Sbjct: 185 REAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVH 244 Query: 491 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMD 670 + GE VR++F AR +AP ++F DE+DSIAT+R R+L +LLT+MD Sbjct: 245 KYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMD 304 Query: 671 GMN 679 G + Sbjct: 305 GFD 307
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 136 bits (342), Expect = 7e-32 Identities = 70/183 (38%), Positives = 110/183 (60%), Gaps = 6/183 (3%) Frame = +2 Query: 149 TIDAEIL--NSMAVTNDHFKTALTTSNPSA----LRETVVEVPNVSWEDIGGLENVKREL 310 TID E+L N+ + H + P+A + T + P+V + DIGG++ K+E+ Sbjct: 118 TIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 490 +E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+ A FI + G E + Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237 Query: 491 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMD 670 + GE VR++F A+ +AP ++F DE+D+IAT+R R+L +LL +MD Sbjct: 238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297 Query: 671 GMN 679 G + Sbjct: 298 GFD 300
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 135 bits (341), Expect = 9e-32 Identities = 70/183 (38%), Positives = 109/183 (59%), Gaps = 6/183 (3%) Frame = +2 Query: 149 TIDAEIL--NSMAVTNDHFKTALTTSNPSA----LRETVVEVPNVSWEDIGGLENVKREL 310 TID E+L N+ + H + P A + T + P+V + DIGG++ K+E+ Sbjct: 118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 490 +E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+ A FI + G E + Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237 Query: 491 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMD 670 + GE VR++F A+ +AP ++F DE+D+IAT+R R+L +LL +MD Sbjct: 238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297 Query: 671 GMN 679 G + Sbjct: 298 GFD 300
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 135 bits (341), Expect = 9e-32 Identities = 70/183 (38%), Positives = 109/183 (59%), Gaps = 6/183 (3%) Frame = +2 Query: 149 TIDAEIL--NSMAVTNDHFKTALTTSNPSA----LRETVVEVPNVSWEDIGGLENVKREL 310 TID E+L N+ + H + P A + T + P+V + DIGG++ K+E+ Sbjct: 118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 490 +E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+ A FI + G E + Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237 Query: 491 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMD 670 + GE VR++F A+ +AP ++F DE+D+IAT+R R+L +LL +MD Sbjct: 238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297 Query: 671 GMN 679 G + Sbjct: 298 GFD 300
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 135 bits (340), Expect = 1e-31 Identities = 71/183 (38%), Positives = 107/183 (58%), Gaps = 6/183 (3%) Frame = +2 Query: 149 TIDAEILN-SMAVTNDHFKTALTTSNPSALRETVV-----EVPNVSWEDIGGLENVKREL 310 T+D E+L S +V AL P ++ E P+VS+ D+GGL+ K+E+ Sbjct: 87 TLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEV 146 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 490 +E V+ P+ + + + G+ P +GVL YGPPG GKT+L KA+AN ANFI + G E + Sbjct: 147 REAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQ 206 Query: 491 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMD 670 + GE VR++F AR +AP ++F DE+D+IAT+R R+L +LLT+MD Sbjct: 207 KYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMD 266 Query: 671 GMN 679 G + Sbjct: 267 GFD 269
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 134 bits (337), Expect = 3e-31 Identities = 61/143 (42%), Positives = 95/143 (66%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 E P++S+ DIGGL+ K+E++E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAK Sbjct: 154 EKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAK 213 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX 610 A+A A+FI + G E + + GE VR++F A+ ++P ++F DE+D+IAT+R Sbjct: 214 AVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDA 273 Query: 611 XXXXXXXXXRVLNQLLTEMDGMN 679 R+L +LL +MDG + Sbjct: 274 QTGADREVQRILLELLNQMDGFD 296
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 134 bits (337), Expect = 3e-31 Identities = 68/145 (46%), Positives = 91/145 (62%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V E P V ++D+GGLE RE+ E V P+++P F + G+ P KGVL +GPPG GKTLL Sbjct: 130 VEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLL 189 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 AKA+A E +A FI + G EL+ + GE VREIF AR AP +LF DE+D+IA++R Sbjct: 190 AKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRV 249 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMN 679 R + QLL E+DG + Sbjct: 250 DIGTSGDREVQRTMLQLLAELDGFD 274
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 134 bits (337), Expect = 3e-31 Identities = 65/145 (44%), Positives = 91/145 (62%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 ++E PNV++ +IGGLE REL+E V+ P+++PE F + G+ P KGVL YGPPG GKT+L Sbjct: 125 IIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTML 184 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 AKA+A E A FI + E + GE VRE+F+ A+ AP ++F DE+D+I +R Sbjct: 185 AKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRI 244 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMN 679 R L QLL E+DG + Sbjct: 245 DIGTSGEREIQRTLMQLLAELDGFD 269 Score = 31.2 bits (69), Expect = 3.1 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +2 Query: 26 NWNIFQXXTHGYVGADLAALCTEAALQCIREKMDIIDLED 145 N + T G+ GAD+ +C EAA IR+ + + + D Sbjct: 328 NLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMND 367
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 134 bits (336), Expect = 3e-31 Identities = 69/183 (37%), Positives = 106/183 (57%), Gaps = 6/183 (3%) Frame = +2 Query: 149 TIDAEILN-SMAVTNDHFKTALTTSNPSALRETVV-----EVPNVSWEDIGGLENVKREL 310 TID E+L S +V AL P ++ E P+V + DIGG++ K+E+ Sbjct: 115 TIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEI 174 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 490 +E V+ P+ H E + + G+ P +GVL YGPPGCGKT+LA A+A+ A FI + G E + Sbjct: 175 REAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQ 234 Query: 491 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMD 670 + GE VR++F A+ ++P ++F DE+D+IAT+R R+L +LL +MD Sbjct: 235 KYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 294 Query: 671 GMN 679 G + Sbjct: 295 GFD 297
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 134 bits (336), Expect = 3e-31 Identities = 65/143 (45%), Positives = 88/143 (61%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V+E PNV + DIGGL E++E ++ P+++PE F++ G+ P KGVL YGPPG GKTLL Sbjct: 125 VIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLL 184 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 AKA+A E A FI + E + GE VRE+F+ AR AP ++F DE+D+I +R Sbjct: 185 AKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRV 244 Query: 605 XXXXXXXXXXXRVLNQLLTEMDG 673 R L QLL E+DG Sbjct: 245 DMGTSGEREIQRTLMQLLAEIDG 267 Score = 29.6 bits (65), Expect = 9.0 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +2 Query: 17 TRGN--WNIFQXXTHGYVGADLAALCTEAALQCIREKMDIIDLED 145 T GN ++I T G+ GA++ +CTEA IR +++ D Sbjct: 323 TDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTD 367
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 133 bits (335), Expect = 4e-31 Identities = 61/147 (41%), Positives = 95/147 (64%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V + P ++ DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLL Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 AKA+AN+ A F+ + G EL+ + G+ VRE+F A AP ++F DE+D+I T+R Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 295 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNAK 685 R + +LL ++DG +++ Sbjct: 296 DSNSGGEREIQRTMLELLNQLDGFDSR 322 Score = 30.4 bits (67), Expect = 5.2 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +2 Query: 65 GADLAALCTEAALQCIREKMDIIDLED 145 GAD+ A+CTEA L +RE+ + ED Sbjct: 392 GADIKAICTEAGLMALRERRMKVTNED 418
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 133 bits (335), Expect = 4e-31 Identities = 61/147 (41%), Positives = 95/147 (64%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V + P ++ DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLL Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 AKA+AN+ A F+ + G EL+ + G+ VRE+F A AP ++F DE+D+I T+R Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 295 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNAK 685 R + +LL ++DG +++ Sbjct: 296 DSNSGGEREIQRTMLELLNQLDGFDSR 322 Score = 30.4 bits (67), Expect = 5.2 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +2 Query: 65 GADLAALCTEAALQCIREKMDIIDLED 145 GAD+ A+CTEA L +RE+ + ED Sbjct: 392 GADIKAICTEAGLMALRERRMKVTNED 418
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 133 bits (335), Expect = 4e-31 Identities = 61/147 (41%), Positives = 95/147 (64%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V + P ++ DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLL Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 AKA+AN+ A F+ + G EL+ + G+ VRE+F A AP ++F DE+D+I T+R Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 295 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNAK 685 R + +LL ++DG +++ Sbjct: 296 DSNSGGEREIQRTMLELLNQLDGFDSR 322 Score = 30.4 bits (67), Expect = 5.2 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +2 Query: 65 GADLAALCTEAALQCIREKMDIIDLED 145 GAD+ A+CTEA L +RE+ + ED Sbjct: 392 GADIKAICTEAGLMALRERRMKVTNED 418
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 133 bits (335), Expect = 4e-31 Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 6/183 (3%) Frame = +2 Query: 149 TIDAEILN-SMAVTNDHFKTALTTSNPSALRETVV-----EVPNVSWEDIGGLENVKREL 310 T+D E+L + V +A+ P + T+ E P+V++ D+GGL+ K+E+ Sbjct: 87 TVDRELLKPNTTVALHRHSSAIVGVLPPEVDSTIPVMGESEKPSVTYGDVGGLDVQKQEI 146 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 490 +ETV+ P+ + + + G+ P +GVL YGPPG GKT+L KA+AN +A FI + G E + Sbjct: 147 KETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVANHTKATFIRVNGSEFVQ 206 Query: 491 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMD 670 + GE VR++F AR AP ++F DE+DSIAT+R RVL +LL +MD Sbjct: 207 KYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLIELLNQMD 266 Query: 671 GMN 679 G + Sbjct: 267 GFD 269
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 133 bits (334), Expect = 6e-31 Identities = 69/191 (36%), Positives = 105/191 (54%), Gaps = 5/191 (2%) Frame = +2 Query: 128 IIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVV-----EVPNVSWEDIGGLE 292 ++DL D+ +I M V D K + P + TV E P+V++ D+GG + Sbjct: 122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181 Query: 293 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 472 +L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI + Sbjct: 182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241 Query: 473 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQ 652 G EL+ + GE VRE+F+ AR C++FFDE+D+I R R + + Sbjct: 242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301 Query: 653 LLTEMDGMNAK 685 L+ ++DG + + Sbjct: 302 LINQLDGFDPR 312
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 133 bits (334), Expect = 6e-31 Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Frame = +2 Query: 131 IDLEDETIDAEILNSMAVTNDHF---KTALTTSNPSALRETVVEVPNVSWEDIGGLENVK 301 ID+ D T + + A+ ND + K +P V +VP+ ++E IGGL+ Sbjct: 103 IDINDVTPNCRV----ALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQI 158 Query: 302 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 481 +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G E Sbjct: 159 KEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 218 Query: 482 LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLT 661 L+ + GE VRE+F AR AP ++F DE+DSI + R R + +LL Sbjct: 219 LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278 Query: 662 EMDGMNA 682 ++DG A Sbjct: 279 QLDGFEA 285
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 133 bits (334), Expect = 6e-31 Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Frame = +2 Query: 131 IDLEDETIDAEILNSMAVTNDHF---KTALTTSNPSALRETVVEVPNVSWEDIGGLENVK 301 ID+ D T + + A+ ND + K +P V +VP+ ++E IGGL+ Sbjct: 103 IDINDVTPNCRV----ALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQI 158 Query: 302 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 481 +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G E Sbjct: 159 KEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 218 Query: 482 LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLT 661 L+ + GE VRE+F AR AP ++F DE+DSI + R R + +LL Sbjct: 219 LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278 Query: 662 EMDGMNA 682 ++DG A Sbjct: 279 QLDGFEA 285
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 133 bits (334), Expect = 6e-31 Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Frame = +2 Query: 131 IDLEDETIDAEILNSMAVTNDHF---KTALTTSNPSALRETVVEVPNVSWEDIGGLENVK 301 ID+ D T + + A+ ND + K +P V +VP+ ++E IGGL+ Sbjct: 103 IDINDVTPNCRV----ALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQI 158 Query: 302 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 481 +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G E Sbjct: 159 KEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 218 Query: 482 LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLT 661 L+ + GE VRE+F AR AP ++F DE+DSI + R R + +LL Sbjct: 219 LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278 Query: 662 EMDGMNA 682 ++DG A Sbjct: 279 QLDGFEA 285
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 133 bits (334), Expect = 6e-31 Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Frame = +2 Query: 131 IDLEDETIDAEILNSMAVTNDHF---KTALTTSNPSALRETVVEVPNVSWEDIGGLENVK 301 ID+ D T + + A+ ND + K +P V +VP+ ++E IGGL+ Sbjct: 103 IDINDVTPNCRV----ALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQI 158 Query: 302 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 481 +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G E Sbjct: 159 KEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 218 Query: 482 LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLT 661 L+ + GE VRE+F AR AP ++F DE+DSI + R R + +LL Sbjct: 219 LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278 Query: 662 EMDGMNA 682 ++DG A Sbjct: 279 QLDGFEA 285
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 133 bits (334), Expect = 6e-31 Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Frame = +2 Query: 131 IDLEDETIDAEILNSMAVTNDHF---KTALTTSNPSALRETVVEVPNVSWEDIGGLENVK 301 ID+ D T + + A+ ND + K +P V +VP+ ++E IGGL+ Sbjct: 103 IDINDVTPNCRV----ALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQI 158 Query: 302 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 481 +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G E Sbjct: 159 KEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 218 Query: 482 LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLT 661 L+ + GE VRE+F AR AP ++F DE+DSI + R R + +LL Sbjct: 219 LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLN 278 Query: 662 EMDGMNA 682 ++DG A Sbjct: 279 QLDGFEA 285
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 133 bits (334), Expect = 6e-31 Identities = 69/191 (36%), Positives = 105/191 (54%), Gaps = 5/191 (2%) Frame = +2 Query: 128 IIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVV-----EVPNVSWEDIGGLE 292 ++DL D+ +I M V D K + P + TV E P+V++ D+GG + Sbjct: 121 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 180 Query: 293 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 472 +L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI + Sbjct: 181 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVI 240 Query: 473 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQ 652 G EL+ + GE VRE+F+ AR C++FFDE+D+I R R + + Sbjct: 241 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 300 Query: 653 LLTEMDGMNAK 685 L+ ++DG + + Sbjct: 301 LINQLDGFDPR 311
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 133 bits (334), Expect = 6e-31 Identities = 69/191 (36%), Positives = 105/191 (54%), Gaps = 5/191 (2%) Frame = +2 Query: 128 IIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVV-----EVPNVSWEDIGGLE 292 ++DL D+ +I M V D K + P + TV E P+V++ D+GG + Sbjct: 121 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 180 Query: 293 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 472 +L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI + Sbjct: 181 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 240 Query: 473 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQ 652 G EL+ + GE VRE+F+ AR C++FFDE+D+I R R + + Sbjct: 241 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 300 Query: 653 LLTEMDGMNAK 685 L+ ++DG + + Sbjct: 301 LINQLDGFDPR 311
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 133 bits (334), Expect = 6e-31 Identities = 69/191 (36%), Positives = 105/191 (54%), Gaps = 5/191 (2%) Frame = +2 Query: 128 IIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVV-----EVPNVSWEDIGGLE 292 ++DL D+ +I M V D K + P + TV E P+V++ D+GG + Sbjct: 121 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 180 Query: 293 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 472 +L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI + Sbjct: 181 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 240 Query: 473 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQ 652 G EL+ + GE VRE+F+ AR C++FFDE+D+I R R + + Sbjct: 241 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 300 Query: 653 LLTEMDGMNAK 685 L+ ++DG + + Sbjct: 301 LINQLDGFDPR 311
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 132 bits (333), Expect = 8e-31 Identities = 68/191 (35%), Positives = 106/191 (55%), Gaps = 5/191 (2%) Frame = +2 Query: 128 IIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVV-----EVPNVSWEDIGGLE 292 ++DL D +I M V D K + P+ + TV E P+V++ D+GG + Sbjct: 124 VVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCK 183 Query: 293 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 472 + +L+E V+ P+ HPE++ G+ P KGVL YGPPG GKTL A+A+AN A FI + Sbjct: 184 DQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVI 243 Query: 473 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQ 652 G EL+ + GE VRE+F+ AR C++FFDE+D++ R R + + Sbjct: 244 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLE 303 Query: 653 LLTEMDGMNAK 685 L+ ++DG + + Sbjct: 304 LINQLDGFDPR 314
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 132 bits (332), Expect = 1e-30 Identities = 71/183 (38%), Positives = 106/183 (57%), Gaps = 6/183 (3%) Frame = +2 Query: 149 TIDAEILN-SMAVTNDHFKTALTTSNPSALRETVV-----EVPNVSWEDIGGLENVKREL 310 TI+ E+L S +V AL P ++ E P+VS+ DIGG + K+E+ Sbjct: 108 TINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEI 167 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 490 +E V+ P+ H E +++ G+ P +GVL YGPPG GKT+LAKA+AN A FI + G E + Sbjct: 168 REAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQ 227 Query: 491 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMD 670 + GE VR++F A+ +AP ++F DE+D+IAT R R+L +LL +MD Sbjct: 228 KYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMD 287 Query: 671 GMN 679 G + Sbjct: 288 GFD 290
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 132 bits (331), Expect = 1e-30 Identities = 62/146 (42%), Positives = 90/146 (61%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V E P + DIGGLE +EL E + P+ H E+FEK G+ P KGVL YGPPG GKTL+ Sbjct: 162 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLM 221 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 A+A A + A F+ + GP+L+ M+ G+ VR+ F A+ APC++F DE+D+I T+R Sbjct: 222 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRF 281 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNA 682 R + +LL ++DG ++ Sbjct: 282 DSEVSGDREVQRTMLELLNQLDGFSS 307
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 132 bits (331), Expect = 1e-30 Identities = 68/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Frame = +2 Query: 131 IDLEDETIDAEILNSMAVTNDHF---KTALTTSNPSALRETVVEVPNVSWEDIGGLENVK 301 +D+ D T + + A+ N+ + K +P V +VP+ ++E +GGL+ Sbjct: 99 VDINDVTANCRV----ALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQI 154 Query: 302 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 481 +E++E ++ PV+HPE F+ G++ KGVL YGPPG GKTLLA+A+A+ + FI + G E Sbjct: 155 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 214 Query: 482 LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLT 661 L+ + GE VRE+F AR AP ++F DE+DSI + R R + +LL Sbjct: 215 LVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 274 Query: 662 EMDGMNA 682 ++DG A Sbjct: 275 QLDGFEA 281
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 131 bits (330), Expect = 2e-30 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Frame = +2 Query: 131 IDLEDETIDAEILNSMAVTNDHF---KTALTTSNPSALRETVVEVPNVSWEDIGGLENVK 301 ID+ D T + + A+ N+ + K +P V +VP+ ++E +GGL+ Sbjct: 102 IDINDVTPNCRV----ALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQI 157 Query: 302 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 481 +E++E ++ PV+HPE F+ G++ KGVL YGPPG GKTLLA+A+A+ + FI + G E Sbjct: 158 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSE 217 Query: 482 LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLT 661 L+ + GE VRE+F AR AP ++F DE+DSI + R R + +LL Sbjct: 218 LVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLN 277 Query: 662 EMDGMNA 682 ++DG A Sbjct: 278 QLDGFEA 284
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 131 bits (329), Expect = 2e-30 Identities = 61/155 (39%), Positives = 94/155 (60%) Frame = +2 Query: 221 NPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 400 +PS TV E P+V++ D+GG ++ +L+E V+ P+ PE+F G+ P KG+L YGP Sbjct: 192 DPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGP 251 Query: 401 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDEL 580 PG GKTL A+A+AN A FI + G EL+ + GE VRE+F+ AR C++FFDE+ Sbjct: 252 PGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEI 311 Query: 581 DSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 D++ R R + +L+T++DG + + Sbjct: 312 DAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPR 346
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 131 bits (329), Expect = 2e-30 Identities = 59/145 (40%), Positives = 93/145 (64%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 + P ++ DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAK Sbjct: 178 KAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAK 237 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX 610 A+AN+ A F+ + G EL+ + G+ VRE+F A P ++F DE+D+I T+R Sbjct: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDS 297 Query: 611 XXXXXXXXXRVLNQLLTEMDGMNAK 685 R + +LL ++DG +++ Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSR 322 Score = 30.4 bits (67), Expect = 5.2 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +2 Query: 65 GADLAALCTEAALQCIREKMDIIDLED 145 GAD+ A+CTEA L +RE+ + ED Sbjct: 392 GADIKAICTEAGLMALRERRMKVTNED 418
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 131 bits (329), Expect = 2e-30 Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 6/183 (3%) Frame = +2 Query: 149 TIDAEILN-SMAVTNDHFKTALTTSNPSALRETVV-----EVPNVSWEDIGGLENVKREL 310 TI+ E+L S +V D AL P ++ E P+V++ DIGG + K+E+ Sbjct: 113 TINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEI 172 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 490 +E V+ P+ H E +++ G+ P +GVL YGPPG GKT+LAKA+A+ A FI + G E + Sbjct: 173 REAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQ 232 Query: 491 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMD 670 + GE VR++F A+ +AP ++F DE+D+IAT R R+L +LL +MD Sbjct: 233 KYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMD 292 Query: 671 GMN 679 G + Sbjct: 293 GFD 295
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 131 bits (329), Expect = 2e-30 Identities = 68/191 (35%), Positives = 104/191 (54%), Gaps = 5/191 (2%) Frame = +2 Query: 128 IIDLEDETIDAEILNSMAVTNDHFKTALTTS-----NPSALRETVVEVPNVSWEDIGGLE 292 ++ L + +I M V D K A+ +PS V E P+V++ D+GG + Sbjct: 126 VVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCK 185 Query: 293 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 472 L+E V+ P+ PE+F K G+ P KG++ YGPPG GKTL A+A+AN A FI + Sbjct: 186 EQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVI 245 Query: 473 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQ 652 G EL+ + GE VRE+F+ AR C++FFDE+D+I R R + + Sbjct: 246 GSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 305 Query: 653 LLTEMDGMNAK 685 L+T++DG + + Sbjct: 306 LITQLDGFDPR 316
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 130 bits (326), Expect = 5e-30 Identities = 58/145 (40%), Positives = 93/145 (64%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 + P ++ DIGGL+ +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAK Sbjct: 177 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAK 236 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX 610 A+AN+ A F+ + G EL+ + G+ VRE+F A AP ++F DE+D++ T+R Sbjct: 237 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 296 Query: 611 XXXXXXXXXRVLNQLLTEMDGMNAK 685 R + +LL ++DG +++ Sbjct: 297 NSGGEREIQRTMLELLNQLDGFDSR 321 Score = 30.4 bits (67), Expect = 5.2 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +2 Query: 65 GADLAALCTEAALQCIREKMDIIDLED 145 GAD+ A+CTEA L +RE+ + ED Sbjct: 391 GADIKAICTEAGLMALRERRMKVTNED 417
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 129 bits (325), Expect = 6e-30 Identities = 60/146 (41%), Positives = 90/146 (61%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V E P + DIGGLE +EL E + P+ H E+F+K G+ P KGVL YGPPG GKTL+ Sbjct: 161 VDEKPTEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLM 220 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 A+A A + A F+ + GP+L+ M+ G+ VR+ F A+ +PC++F DE+D+I T+R Sbjct: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 280 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNA 682 R + +LL ++DG ++ Sbjct: 281 DSEVSGDREVQRTMLELLNQLDGFSS 306
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 129 bits (323), Expect = 1e-29 Identities = 64/146 (43%), Positives = 92/146 (63%), Gaps = 1/146 (0%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 + E P V+++D+ G+E VK E++E ++Y ++ P KF+K G P KGVL YG PG GKTLL Sbjct: 146 IEEKPKVTFKDVAGIEEVKEEVKEIIEY-LKDPVKFQKLGGRPPKGVLLYGEPGVGKTLL 204 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 AKAIA E FIS+ G + + M+ G A VR++F+ A+ APC++F DE+D++ R Sbjct: 205 AKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARG 264 Query: 605 XX-XXXXXXXXXRVLNQLLTEMDGMN 679 + LNQLL EMDG + Sbjct: 265 AIPVGGGHDEREQTLNQLLVEMDGFD 290
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 129 bits (323), Expect = 1e-29 Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Frame = +2 Query: 131 IDLEDETIDAEILNSMAVTNDHF---KTALTTSNPSALRETVVEVPNVSWEDIGGLENVK 301 ID+ D T + + A+ ND + K +P V +VP+ ++E IGGL+ Sbjct: 98 IDINDVTPNCRV----ALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQI 153 Query: 302 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 481 +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G E Sbjct: 154 KEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 213 Query: 482 LLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLT 661 L+ + GE VRE+F AR AP ++F DE+DSI + R R + +LL Sbjct: 214 LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS-RLEGGSGGDSEVQRTMLELLN 272 Query: 662 EMDGMNA 682 ++DG A Sbjct: 273 QLDGFEA 279
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 129 bits (323), Expect = 1e-29 Identities = 61/146 (41%), Positives = 90/146 (61%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V E P + DIGGLE +EL E + P+ H E+FEK G+ P KGVL YGPPG GKTL+ Sbjct: 157 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLM 216 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 A+A A + A F+ + GP+L+ M+ G+ VR+ F A+ +PC++F DE+D+I T+R Sbjct: 217 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRF 276 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNA 682 R + +LL ++DG ++ Sbjct: 277 DSEVSGDREVQRTMLELLNQLDGFSS 302
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 129 bits (323), Expect = 1e-29 Identities = 67/181 (37%), Positives = 105/181 (58%), Gaps = 6/181 (3%) Frame = +2 Query: 149 TIDAEILN-SMAVTNDHFKTALTTSNPSALRETVV-----EVPNVSWEDIGGLENVKREL 310 T+D E L S +V AL P ++ E P+V++ D+GGL+ K+E+ Sbjct: 119 TLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEI 178 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 490 +E V+ P+ + +++ G+ P +GVL YGPPG GKT+L KA+AN A+FI + G E + Sbjct: 179 REAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQ 238 Query: 491 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMD 670 + GE VR++F AR ++P ++F DE+D+IAT+R R+L +LL +MD Sbjct: 239 KYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 298 Query: 671 G 673 G Sbjct: 299 G 299
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 129 bits (323), Expect = 1e-29 Identities = 69/183 (37%), Positives = 106/183 (57%), Gaps = 6/183 (3%) Frame = +2 Query: 149 TIDAEILN-SMAVTNDHFKTALTTSNPSALRETVV-----EVPNVSWEDIGGLENVKREL 310 TID E+L S +V AL + P ++ E P+ S+ DIGG + K+E+ Sbjct: 103 TIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEM 162 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 490 +E V+ P+ H +++ G+ P +GVL YGPPG GKT+LAKA+A+ A FI + G E + Sbjct: 163 REAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQ 222 Query: 491 MWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMD 670 + GE VR++F AR ++P ++F DE+D+IAT+R R+L +LL +MD Sbjct: 223 KYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMD 282 Query: 671 GMN 679 G + Sbjct: 283 GFD 285
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 128 bits (322), Expect = 1e-29 Identities = 59/146 (40%), Positives = 90/146 (61%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V E P + DIGGLE +EL E + P+ H ++F+K G+ P KGVL YGPPG GKTL+ Sbjct: 167 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLM 226 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 A+A A + A F+ + GP+L+ M+ G+ VR+ F A+ +PC++F DE+D+I T+R Sbjct: 227 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRF 286 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNA 682 R + +LL ++DG ++ Sbjct: 287 DSEVSGDREVQRTMLELLNQLDGFSS 312
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 128 bits (322), Expect = 1e-29 Identities = 66/173 (38%), Positives = 99/173 (57%), Gaps = 4/173 (2%) Frame = +2 Query: 176 MAVTNDHFKTALTTSN---PSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 346 +A+ ND ++ N P V ++P+ ++E +GGLE +E++E ++ PV+HPE Sbjct: 110 VALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPE 169 Query: 347 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRE 526 FE G+ KG+L YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE Sbjct: 170 LFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRE 229 Query: 527 IFDKARGSAPCVLFFDELDSIATQRX-XXXXXXXXXXXRVLNQLLTEMDGMNA 682 +F AR AP ++F DE+DSI + R R + +LL ++DG A Sbjct: 230 LFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEA 282 Score = 29.6 bits (65), Expect = 9.0 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +2 Query: 53 HGYVGADLAALCTEAALQCIREKMDIIDLED-ETIDAEILN 172 +G GA+L +CTEA + +RE+ + ED E A++LN Sbjct: 349 NGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLN 389
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 128 bits (321), Expect = 2e-29 Identities = 58/143 (40%), Positives = 91/143 (63%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 + P S+ DIGGLE+ +E++E V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLLAK Sbjct: 184 KAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAK 243 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX 610 A+AN+ A F+ + G EL+ + G+ VR++F+ A +P ++F DE+D+I T+R Sbjct: 244 AVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDA 303 Query: 611 XXXXXXXXXRVLNQLLTEMDGMN 679 R + +LL ++DG + Sbjct: 304 QSGAEREIQRTMLELLNQLDGFD 326
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 127 bits (320), Expect = 2e-29 Identities = 58/140 (41%), Positives = 88/140 (62%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 NVS+ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188 Query: 440 NECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXX 619 ++ NF+ + ++ + GES +RE+F+ AR PC++F DE+D+I +R Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248 Query: 620 XXXXXXRVLNQLLTEMDGMN 679 R L +LL +MDG + Sbjct: 249 ADREIQRTLMELLNQMDGFD 268 Score = 30.0 bits (66), Expect = 6.9 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +2 Query: 56 GYVGADLAALCTEAALQCIREKMDIIDLED 145 G+ GADL +CTEA + IR D + ED Sbjct: 337 GFNGADLRNVCTEAGMFAIRADHDFVVQED 366
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 127 bits (320), Expect = 2e-29 Identities = 58/140 (41%), Positives = 88/140 (62%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 NVS+ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188 Query: 440 NECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXX 619 ++ NF+ + ++ + GES +RE+F+ AR PC++F DE+D+I +R Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248 Query: 620 XXXXXXRVLNQLLTEMDGMN 679 R L +LL +MDG + Sbjct: 249 ADREIQRTLMELLNQMDGFD 268 Score = 30.0 bits (66), Expect = 6.9 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +2 Query: 56 GYVGADLAALCTEAALQCIREKMDIIDLED 145 G+ GADL +CTEA + IR D + ED Sbjct: 337 GFNGADLRNVCTEAGMFAIRADHDFVVQED 366
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 127 bits (320), Expect = 2e-29 Identities = 58/140 (41%), Positives = 88/140 (62%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 NVS+ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188 Query: 440 NECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXX 619 ++ NF+ + ++ + GES +RE+F+ AR PC++F DE+D+I +R Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248 Query: 620 XXXXXXRVLNQLLTEMDGMN 679 R L +LL +MDG + Sbjct: 249 ADREIQRTLMELLNQMDGFD 268 Score = 30.0 bits (66), Expect = 6.9 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +2 Query: 56 GYVGADLAALCTEAALQCIREKMDIIDLED 145 G+ GADL +CTEA + IR D + ED Sbjct: 337 GFNGADLRNVCTEAGMFAIRADHDFVVQED 366
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 127 bits (319), Expect = 3e-29 Identities = 60/141 (42%), Positives = 90/141 (63%) Frame = +2 Query: 257 PNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 436 P S+ DIGGLE+ +E++E+V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLLAKA+ Sbjct: 177 PTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 236 Query: 437 ANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXX 616 AN+ A F+ I G EL+ + G+ R+IF A +AP ++F DE+D+I T+R Sbjct: 237 ANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNS 296 Query: 617 XXXXXXXRVLNQLLTEMDGMN 679 R + +LL ++DG + Sbjct: 297 GGEREIQRTMLELLNQLDGFD 317 Score = 30.4 bits (67), Expect = 5.2 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +2 Query: 65 GADLAALCTEAALQCIREKMDIIDLED 145 GAD+ A+CTEA L +RE+ + ED Sbjct: 389 GADIQAMCTEAGLLALRERRMQVTAED 415
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 127 bits (319), Expect = 3e-29 Identities = 70/180 (38%), Positives = 99/180 (55%), Gaps = 6/180 (3%) Frame = +2 Query: 152 IDAEILNS---MAVTNDHFKTALTTSNPSALRETVVEV---PNVSWEDIGGLENVKRELQ 313 +DAE L + V D + T R +EV P + DIGGL+ +EL Sbjct: 140 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 199 Query: 314 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 493 E + P+ H EKFE G+ P KGVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M Sbjct: 200 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 259 Query: 494 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDG 673 + G+ VR+ F A+ AP ++F DELD+I T+R R + +LL ++DG Sbjct: 260 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 319
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 127 bits (319), Expect = 3e-29 Identities = 70/180 (38%), Positives = 99/180 (55%), Gaps = 6/180 (3%) Frame = +2 Query: 152 IDAEILNS---MAVTNDHFKTALTTSNPSALRETVVEV---PNVSWEDIGGLENVKRELQ 313 +DAE L + V D + T R +EV P + DIGGL+ +EL Sbjct: 140 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 199 Query: 314 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 493 E + P+ H EKFE G+ P KGVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M Sbjct: 200 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 259 Query: 494 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDG 673 + G+ VR+ F A+ AP ++F DELD+I T+R R + +LL ++DG Sbjct: 260 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 319
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 127 bits (319), Expect = 3e-29 Identities = 70/180 (38%), Positives = 99/180 (55%), Gaps = 6/180 (3%) Frame = +2 Query: 152 IDAEILNS---MAVTNDHFKTALTTSNPSALRETVVEV---PNVSWEDIGGLENVKRELQ 313 +DAE L + V D + T R +EV P + DIGGL+ +EL Sbjct: 124 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 183 Query: 314 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 493 E + P+ H EKFE G+ P KGVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M Sbjct: 184 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 243 Query: 494 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDG 673 + G+ VR+ F A+ AP ++F DELD+I T+R R + +LL ++DG Sbjct: 244 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 303
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 127 bits (319), Expect = 3e-29 Identities = 70/180 (38%), Positives = 99/180 (55%), Gaps = 6/180 (3%) Frame = +2 Query: 152 IDAEILNS---MAVTNDHFKTALTTSNPSALRETVVEV---PNVSWEDIGGLENVKRELQ 313 +DAE L + V D + T R +EV P + DIGGL+ +EL Sbjct: 143 VDAEKLKPGDLVGVNKDSYLILETLPTDYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 202 Query: 314 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 493 E + P+ H EKFE G+ P KGVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M Sbjct: 203 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 262 Query: 494 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDG 673 + G+ VR+ F A+ AP ++F DELD+I T+R R + +LL ++DG Sbjct: 263 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 322
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 127 bits (318), Expect = 4e-29 Identities = 70/190 (36%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Frame = +2 Query: 110 IREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETV-VEVPNVSWEDIGG 286 ++EK + I + + + S + T + + SAL + VE PNV W+DI G Sbjct: 74 LQEKNNQISSKSRVSNGNVEGSNSPTANEALDSDAKKLRSALTSAILVEKPNVRWDDIAG 133 Query: 287 LENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS 466 LEN K L+ETV P++ P+ F G P G+L YGPPG GK+ LAKA+A E + F S Sbjct: 134 LENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFS 192 Query: 467 IKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVL 646 I +L++ W GESE VR++F+ AR P ++F DE+DS+ R R+ Sbjct: 193 ISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSR---SEGESESSRRIK 249 Query: 647 NQLLTEMDGM 676 + L +M+G+ Sbjct: 250 TEFLVQMNGV 259
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 126 bits (317), Expect = 5e-29 Identities = 57/145 (39%), Positives = 92/145 (63%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 + P ++ D+GGL+ +E++E V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLLAK Sbjct: 181 KAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAK 240 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX 610 A+AN+ A F+ I G EL+ + G+ VRE+F A +AP ++F DE+D++ T+R Sbjct: 241 AVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDS 300 Query: 611 XXXXXXXXXRVLNQLLTEMDGMNAK 685 R + +LL ++DG +++ Sbjct: 301 NSGGEREIQRTMLELLNQLDGFDSR 325 Score = 31.6 bits (70), Expect = 2.4 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +2 Query: 65 GADLAALCTEAALQCIREKMDIIDLED 145 GAD+ A+CTEA L +RE+ + +ED Sbjct: 395 GADIKAMCTEAGLLALRERRMRVTMED 421
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 126 bits (317), Expect = 5e-29 Identities = 72/172 (41%), Positives = 103/172 (59%), Gaps = 21/172 (12%) Frame = +2 Query: 224 PSALRETVV--EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG 397 P A E +V EVP+VS++DIGGL ++++ V+ P H E + ++ + P KGVL YG Sbjct: 234 PKAEVEDLVLEEVPDVSYQDIGGLTRQIEQIRDAVELPFLHKELYREYALRPPKGVLLYG 293 Query: 398 PPGCGKTLLAKAIAN---------------ECQANFISIKGPELLTMWFGESEANVREIF 532 PPGCGKTL+AKA+AN E ++ F++IKGPELL + GE+E ++R IF Sbjct: 294 PPGCGKTLIAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETERHIRLIF 353 Query: 533 DKARGSA----PCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGM 676 +AR A P ++FFDE+DSI R V+ QLL+E+DG+ Sbjct: 354 QRAREKASEGTPVIVFFDEMDSIF--RTRGTGVSSDVETTVVPQLLSEIDGV 403
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 126 bits (316), Expect = 7e-29 Identities = 69/192 (35%), Positives = 112/192 (58%), Gaps = 7/192 (3%) Frame = +2 Query: 128 IIDLEDETIDAEILNS---MAVTNDHF---KTALTTSNPSALRETVVEVPNVSWEDIGGL 289 I+D+ D++I+ + L +A+ ND + K +P V +VP+ ++E +GGL Sbjct: 103 IVDI-DKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGL 161 Query: 290 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI 469 + +E++E ++ P++HPE FE G++ KGV+ YGPPG GKTLLA+A+A+ FI + Sbjct: 162 DEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAHHTDCTFIRV 221 Query: 470 KGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI-ATQRXXXXXXXXXXXXRVL 646 G EL+ + GE VRE+F AR AP ++F DE+DSI +T+ R + Sbjct: 222 SGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTM 281 Query: 647 NQLLTEMDGMNA 682 +LL ++DG + Sbjct: 282 LELLNQLDGFES 293
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 126 bits (316), Expect = 7e-29 Identities = 59/143 (41%), Positives = 89/143 (62%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V +VP+ +++ +GGL +E++E ++ PV+HPE FE G++ KGV+ YGPPG GKTLL Sbjct: 139 VEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLL 198 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 A+A+A+ FI + G EL+ + GE VRE+F AR AP ++F DE+DSI + R Sbjct: 199 ARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRV 258 Query: 605 XXXXXXXXXXXRVLNQLLTEMDG 673 R + +LL ++DG Sbjct: 259 EGSGGGDSEVQRTMLELLNQLDG 281
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 126 bits (316), Expect = 7e-29 Identities = 69/180 (38%), Positives = 98/180 (54%), Gaps = 6/180 (3%) Frame = +2 Query: 152 IDAEILNS---MAVTNDHFKTALTTSNPSALRETVVEV---PNVSWEDIGGLENVKRELQ 313 +DAE L + V D + T R +EV P + DIGGL+ +EL Sbjct: 105 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 164 Query: 314 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 493 E + P+ H EKFE G+ P KGVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M Sbjct: 165 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 224 Query: 494 WFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDG 673 + G+ VR+ F A+ AP ++F DELD+I +R R + +LL ++DG Sbjct: 225 FIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDG 284
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 126 bits (316), Expect = 7e-29 Identities = 66/149 (44%), Positives = 89/149 (59%) Frame = +2 Query: 227 SALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 406 S R +V + ++D+ G+E K EL E V + +++P KF G S KGVL GPPG Sbjct: 139 SKARFQMVAKTGIMFDDVAGIEEAKEELAEVVAF-LKNPSKFLAVGASIPKGVLLVGPPG 197 Query: 407 CGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDS 586 GKTLLAKAIA E F SI G E + M+ G + VR++F KA+ +APC++F DE+D+ Sbjct: 198 TGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDA 257 Query: 587 IATQRXXXXXXXXXXXXRVLNQLLTEMDG 673 + QR + LNQLLTEMDG Sbjct: 258 VGRQRGAGIGGGNDEREQTLNQLLTEMDG 286
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 125 bits (315), Expect = 9e-29 Identities = 72/172 (41%), Positives = 102/172 (59%), Gaps = 21/172 (12%) Frame = +2 Query: 224 PSALRETVV--EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG 397 P A E +V EVP+VS+ DIGGL ++++ V+ P H E + ++ + P KGVL YG Sbjct: 234 PKAEVEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVLLYG 293 Query: 398 PPGCGKTLLAKAIAN---------------ECQANFISIKGPELLTMWFGESEANVREIF 532 PPGCGKTL+AKA+AN E ++ F++IKGPELL + GE+E ++R IF Sbjct: 294 PPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIF 353 Query: 533 DKARGSA----PCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGM 676 +AR A P ++FFDE+DSI R V+ QLL+E+DG+ Sbjct: 354 QRAREKASEGTPVIVFFDEMDSIF--RTRGTGVSSDVETTVVPQLLSEIDGV 403
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 125 bits (315), Expect = 9e-29 Identities = 72/172 (41%), Positives = 102/172 (59%), Gaps = 21/172 (12%) Frame = +2 Query: 224 PSALRETVV--EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG 397 P A E +V EVP+VS+ DIGGL ++++ V+ P H E + ++ + P KGVL YG Sbjct: 234 PKAEVEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVLLYG 293 Query: 398 PPGCGKTLLAKAIAN---------------ECQANFISIKGPELLTMWFGESEANVREIF 532 PPGCGKTL+AKA+AN E ++ F++IKGPELL + GE+E ++R IF Sbjct: 294 PPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIF 353 Query: 533 DKARGSA----PCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGM 676 +AR A P ++FFDE+DSI R V+ QLL+E+DG+ Sbjct: 354 QRAREKASEGTPVIVFFDEMDSIF--RTRGTGVSSDVETTVVPQLLSEIDGV 403
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 125 bits (315), Expect = 9e-29 Identities = 56/141 (39%), Positives = 90/141 (63%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 N+S+ D+GGL REL+E V+ P+ +PE F++ G++P KG L +GPPG GKTLLA+A+A Sbjct: 146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205 Query: 440 NECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXX 619 ++ NF+ + ++ + GES +RE+F+ AR PC++F DE+D+I +R Sbjct: 206 SQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTS 265 Query: 620 XXXXXXRVLNQLLTEMDGMNA 682 R L +LL ++DG ++ Sbjct: 266 ADREIQRTLMELLNQLDGFDS 286
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 125 bits (314), Expect = 1e-28 Identities = 63/137 (45%), Positives = 85/137 (62%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V ++D+ G++ K ELQE V + ++ PEKF G +GVL GPPG GKTLLAKAIA Sbjct: 208 VGFDDVAGIDEAKEELQEVVTF-LKQPEKFTAIGAKIPRGVLLIGPPGTGKTLLAKAIAG 266 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E F SI G E + M+ G + VR++F KA+ +APC++F DE+D++ QR Sbjct: 267 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVGRQRGVGYGGG 326 Query: 623 XXXXXRVLNQLLTEMDG 673 + LNQLLTEMDG Sbjct: 327 NDEREQTLNQLLTEMDG 343
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 125 bits (314), Expect = 1e-28 Identities = 64/139 (46%), Positives = 85/139 (61%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 + +ED+ G+E K ELQE V + ++ KF G + KGVL GPPG GKTLLAKAIA Sbjct: 168 IVFEDVAGIEEAKEELQEIVAF-LKDSRKFTNVGATIPKGVLLVGPPGTGKTLLAKAIAG 226 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E A F SI G E + M+ G + VR++F KA+ APC++F DE+D++ QR Sbjct: 227 EASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQRGVGIGGG 286 Query: 623 XXXXXRVLNQLLTEMDGMN 679 + LNQLLTEMDG + Sbjct: 287 NDEREQTLNQLLTEMDGFS 305
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 125 bits (314), Expect = 1e-28 Identities = 63/137 (45%), Positives = 85/137 (62%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V ++D+ G++ K ELQE V + ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 169 VMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 227 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E F SI G E + M+ G + VR++F KA+ +APC++F DE+D++ QR Sbjct: 228 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGG 287 Query: 623 XXXXXRVLNQLLTEMDG 673 + LNQLLTEMDG Sbjct: 288 NDEREQTLNQLLTEMDG 304
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 124 bits (312), Expect = 2e-28 Identities = 62/154 (40%), Positives = 92/154 (59%) Frame = +2 Query: 218 SNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG 397 ++P T E ++++ IGGL REL+E ++ P+++PE F++ G+ P KGVL YG Sbjct: 163 TDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYG 222 Query: 398 PPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDE 577 PPG GKTLLAKA+A ANFI ++ + GES +RE+F A+ PC++F DE Sbjct: 223 PPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDE 282 Query: 578 LDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 +D+I +R R L +LLT+MDG + Sbjct: 283 VDAIGGRRFSEGTSADREIQRTLMELLTQMDGFD 316
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 124 bits (310), Expect = 3e-28 Identities = 58/147 (39%), Positives = 91/147 (61%), Gaps = 1/147 (0%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V ++P+ +++ +GGL+ +E++E ++ P++HPE FE G++ KGVL YGPPG GKTLL Sbjct: 122 VEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 181 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR- 601 A+A+A+ FI + G EL+ + GE VRE+F AR AP ++F DE+DSI + R Sbjct: 182 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRG 241 Query: 602 XXXXXXXXXXXXRVLNQLLTEMDGMNA 682 R + +LL ++DG + Sbjct: 242 ESGSGGGDSEVQRTMLELLNQLDGFES 268 Score = 30.8 bits (68), Expect = 4.0 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +2 Query: 17 TRG-NWNIFQXXTHGYVGADLAALCTEAALQCIREKMDIIDLED 145 TRG N +G GA+L A+CTEA + +RE+ + ED Sbjct: 322 TRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQED 365
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 123 bits (309), Expect = 5e-28 Identities = 63/137 (45%), Positives = 82/137 (59%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V + D+ G+E K E QE V + ++ PE F G KGVL GPPG GKTLLAKAIA Sbjct: 170 VVFNDVAGVEEAKEEFQEVVTF-LKQPESFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 228 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E F SI G E + M+ G + VR++F KA+ +APC++F DE+D++ QR Sbjct: 229 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGRQRGTGVGGG 288 Query: 623 XXXXXRVLNQLLTEMDG 673 + LNQLLTEMDG Sbjct: 289 NDEREQTLNQLLTEMDG 305
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 123 bits (309), Expect = 5e-28 Identities = 61/137 (44%), Positives = 85/137 (62%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 VS++DI G++ K E +E V + ++ P+K+ G KG+L GPPG GKTLLAKAIAN Sbjct: 183 VSFKDIAGIDEAKTEFEEIVSF-LKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKAIAN 241 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E F S+ G E + M+ G A VR++F KA +APC++F DE+D++ +R Sbjct: 242 EADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDAVGRERGAGVGGG 301 Query: 623 XXXXXRVLNQLLTEMDG 673 + LNQLLTEMDG Sbjct: 302 NDEREQTLNQLLTEMDG 318
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 122 bits (306), Expect = 1e-27 Identities = 58/147 (39%), Positives = 90/147 (61%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V + P S+ DIGGL+ +E++E V+ P+ HPE +E G+ P KGV+ YG PG GKTLL Sbjct: 184 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLL 243 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 AKA+AN A F+ + G EL+ + G+ VRE+F A +P ++F DE+D++ T+R Sbjct: 244 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRY 303 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNAK 685 R + +LL ++DG +++ Sbjct: 304 DAHSGGEREIQRTMLELLNQLDGFDSR 330
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 121 bits (304), Expect = 2e-27 Identities = 60/137 (43%), Positives = 84/137 (61%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V++ D+ G++ K E +E V + ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 170 VTFNDVAGVDEAKEEFEEVVSF-LKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 228 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E F SI G E + M+ G + VR++F KA+ ++PC++F DE+D++ QR Sbjct: 229 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDAVGRQRGTGIGGG 288 Query: 623 XXXXXRVLNQLLTEMDG 673 + LNQLLTEMDG Sbjct: 289 NDEREQTLNQLLTEMDG 305
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 120 bits (302), Expect = 3e-27 Identities = 59/137 (43%), Positives = 86/137 (62%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V++ D+ G+E K EL E V + +++ ++F + G KGVL GPPG GKTLLAKA+A Sbjct: 158 VTFGDVAGIEQAKLELTEVVDF-LKNADRFTELGAKIPKGVLLVGPPGTGKTLLAKAVAG 216 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E F SI G E + M+ G + VR++F++A+ +APC++F DE+D++ QR Sbjct: 217 EAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGAGLGGG 276 Query: 623 XXXXXRVLNQLLTEMDG 673 + LNQLLTEMDG Sbjct: 277 NDEREQTLNQLLTEMDG 293
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 120 bits (302), Expect = 3e-27 Identities = 57/153 (37%), Positives = 90/153 (58%) Frame = +2 Query: 221 NPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 400 +P ++ + ++S+ +GGL REL+E ++ P+++PE F + G+ P KGVL YGP Sbjct: 115 DPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGP 174 Query: 401 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDEL 580 PG GKTLLA+A+A NF+ + ++ + GES +RE+F A+ PCV+F DE+ Sbjct: 175 PGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEI 234 Query: 581 DSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 D+I +R R L +LL +MDG + Sbjct: 235 DAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 267
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 120 bits (302), Expect = 3e-27 Identities = 60/139 (43%), Positives = 86/139 (61%), Gaps = 1/139 (0%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 VS++D+ G+ K E++E V Y ++ PE+F + G KG L GPPGCGKTLLAKA+A Sbjct: 306 VSFKDVAGMHEAKLEVREFVDY-LKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX-XXX 619 E Q F+++ GPE + + G A VR +F +AR APC+++ DE+D++ +R Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424 Query: 620 XXXXXXRVLNQLLTEMDGM 676 + LNQLL EMDGM Sbjct: 425 SNTEEEQTLNQLLVEMDGM 443 Score = 30.4 bits (67), Expect = 5.2 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIRE 118 T G+ GAD+A +C EAAL RE Sbjct: 513 TPGFSGADIANICNEAALHAARE 535
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 120 bits (301), Expect = 4e-27 Identities = 56/139 (40%), Positives = 86/139 (61%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 +++ D+ G + K E+QE V+Y ++ P +F+K G KG+L GPPG GKTLLAKAIA Sbjct: 149 ITFSDVAGCDEAKEEVQELVEY-LKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAG 207 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E + F +I G + + M+ G + VR++F+ +R APC++F DE+D++ QR Sbjct: 208 EAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFIDEIDAVGRQRGAGLGGG 267 Query: 623 XXXXXRVLNQLLTEMDGMN 679 + LNQ+L EMDG + Sbjct: 268 HDEREQTLNQMLVEMDGFD 286 Score = 31.6 bits (70), Expect = 2.4 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +2 Query: 35 IFQXXTHGYVGADLAALCTEAALQCIREKMDIIDLED 145 I T G+ GADLA L EAAL R D++ + D Sbjct: 348 IIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSD 384
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 120 bits (301), Expect = 4e-27 Identities = 60/147 (40%), Positives = 92/147 (62%), Gaps = 5/147 (3%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 +V ++ +GGL + + L+E V +P+ +PE FEKF ++P KGV+FYGPPG GKTL+A+A+A Sbjct: 387 SVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALA 446 Query: 440 NECQAN-----FISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 NEC+ F KG + L+ W GESE +R +FD+A P ++FFDE+D +A R Sbjct: 447 NECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRS 506 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNAK 685 +++ LL MDG++ + Sbjct: 507 SKQDQIHAS---IVSTLLALMDGLDGR 530 Score = 42.0 bits (97), Expect = 0.002 Identities = 22/67 (32%), Positives = 38/67 (56%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 T GY GADL LCTEA L +R + I + E + ++ ++ +T++HF A+ P+ Sbjct: 597 TSGYCGADLKFLCTEAVLIGLRSRYPHIYMCSERLKLDVA-TIKITSEHFGHAMRRITPA 655 Query: 230 ALRETVV 250 + R+ + Sbjct: 656 SRRDLTI 662
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 120 bits (301), Expect = 4e-27 Identities = 63/148 (42%), Positives = 85/148 (57%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 R+ + P V W+D+ GL KR L+E V P+ PE F+ P KGVL +GPPG GK Sbjct: 227 RDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGI-RRPWKGVLMFGPPGTGK 285 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 TLLAKA+A EC F ++ L + W GESE VR +FD AR AP +F DE+DS+ Sbjct: 286 TLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN 345 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 R RV ++LL ++DG++ Sbjct: 346 SR--GGSGEHESSRRVKSELLVQVDGVS 371
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 120 bits (301), Expect = 4e-27 Identities = 57/138 (41%), Positives = 85/138 (61%) Frame = +2 Query: 266 SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 445 ++ D+ G + K E+ E V+Y ++ P +F+K G KG+L GPPG GKTLLAKAIA E Sbjct: 150 TFADVAGCDEAKEEVSELVEY-LKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGE 208 Query: 446 CQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXX 625 + F +I G + + M+ G + VR++F+ AR SAPC++F DE+D++ QR Sbjct: 209 AKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGH 268 Query: 626 XXXXRVLNQLLTEMDGMN 679 + LNQ+L EMDG + Sbjct: 269 DEREQTLNQMLVEMDGFD 286
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 120 bits (300), Expect = 5e-27 Identities = 57/142 (40%), Positives = 84/142 (59%) Frame = +2 Query: 257 PNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 436 P ++++D+ G++ K EL E V + + P KF+K G KG L GPPG GKTLLAKAI Sbjct: 150 PKITFKDVAGIDEAKEELTEIVDF-LRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAI 208 Query: 437 ANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXX 616 A E F SI G + + M+ G + VR++F++ + +APC++F DE+D++ R Sbjct: 209 AGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMG 268 Query: 617 XXXXXXXRVLNQLLTEMDGMNA 682 + LNQ+L EMDG A Sbjct: 269 GGNDEREQTLNQMLVEMDGFEA 290
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 120 bits (300), Expect = 5e-27 Identities = 57/142 (40%), Positives = 84/142 (59%) Frame = +2 Query: 257 PNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 436 P ++++D+ G++ K EL E V + + P KF+K G KG L GPPG GKTLLAKAI Sbjct: 150 PKITFKDVAGIDEAKEELTEIVDF-LRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAI 208 Query: 437 ANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXX 616 A E F SI G + + M+ G + VR++F++ + +APC++F DE+D++ R Sbjct: 209 AGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMG 268 Query: 617 XXXXXXXRVLNQLLTEMDGMNA 682 + LNQ+L EMDG A Sbjct: 269 GGNDEREQTLNQMLVEMDGFEA 290
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 119 bits (298), Expect = 9e-27 Identities = 56/138 (40%), Positives = 85/138 (61%) Frame = +2 Query: 266 SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 445 ++ D+ G + K E+ E V+Y ++ P +F+K G KG+L GPPG GKTLLAKAIA E Sbjct: 150 TFADVAGCDEAKEEVSELVEY-LKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGE 208 Query: 446 CQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXX 625 + F +I G + + M+ G + VR++F+ +R SAPC++F DE+D++ QR Sbjct: 209 AKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAGLGGGH 268 Query: 626 XXXXRVLNQLLTEMDGMN 679 + LNQ+L EMDG + Sbjct: 269 DEREQTLNQMLVEMDGFD 286
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 119 bits (297), Expect = 1e-26 Identities = 60/144 (41%), Positives = 86/144 (59%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 E V ++D+ G + K+EL E V++ ++ P KF + G KGVL GPPG GKTLLAK Sbjct: 154 EKKRVKFKDVAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPPGTGKTLLAK 212 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX 610 A A E F SI G + + M+ G + VR++F+ A+ +APC++F DE+D++ QR Sbjct: 213 ACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAG 272 Query: 611 XXXXXXXXXRVLNQLLTEMDGMNA 682 + LNQLL EMDG +A Sbjct: 273 LGGGHDEREQTLNQLLVEMDGFSA 296
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 118 bits (296), Expect = 1e-26 Identities = 58/142 (40%), Positives = 84/142 (59%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 E PNV WED+ GLE K L+E V PV+ P F K P+ G+L YGPPG GK+ LAK Sbjct: 126 EKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLF-KGNRKPTSGILLYGPPGTGKSYLAK 184 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXX 610 A+A E + F S+ +L++ W GESE V+++F AR + P ++F DE+D++ R Sbjct: 185 AVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTR--- 241 Query: 611 XXXXXXXXXRVLNQLLTEMDGM 676 R+ +LL +M+G+ Sbjct: 242 GEGESEASRRIKTELLVQMNGV 263
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 118 bits (295), Expect = 2e-26 Identities = 56/136 (41%), Positives = 84/136 (61%) Frame = +2 Query: 266 SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 445 ++ D+ G + K E+ E V+Y + P +F+K G KGVL GPPG GKTLLAKAIA E Sbjct: 150 TFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE 208 Query: 446 CQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXX 625 + F +I G + + M+ G + VR++F++A+ +APC++F DE+D++ QR Sbjct: 209 AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGH 268 Query: 626 XXXXRVLNQLLTEMDG 673 + LNQ+L EMDG Sbjct: 269 DEREQTLNQMLVEMDG 284
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 118 bits (295), Expect = 2e-26 Identities = 56/136 (41%), Positives = 84/136 (61%) Frame = +2 Query: 266 SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 445 ++ D+ G + K E+ E V+Y + P +F+K G KGVL GPPG GKTLLAKAIA E Sbjct: 150 TFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE 208 Query: 446 CQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXX 625 + F +I G + + M+ G + VR++F++A+ +APC++F DE+D++ QR Sbjct: 209 AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGH 268 Query: 626 XXXXRVLNQLLTEMDG 673 + LNQ+L EMDG Sbjct: 269 DEREQTLNQMLVEMDG 284
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 118 bits (295), Expect = 2e-26 Identities = 56/136 (41%), Positives = 84/136 (61%) Frame = +2 Query: 266 SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 445 ++ D+ G + K E+ E V+Y + P +F+K G KGVL GPPG GKTLLAKAIA E Sbjct: 150 TFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE 208 Query: 446 CQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXX 625 + F +I G + + M+ G + VR++F++A+ +APC++F DE+D++ QR Sbjct: 209 AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGH 268 Query: 626 XXXXRVLNQLLTEMDG 673 + LNQ+L EMDG Sbjct: 269 DEREQTLNQMLVEMDG 284
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 118 bits (295), Expect = 2e-26 Identities = 56/136 (41%), Positives = 84/136 (61%) Frame = +2 Query: 266 SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 445 ++ D+ G + K E+ E V+Y + P +F+K G KGVL GPPG GKTLLAKAIA E Sbjct: 150 TFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE 208 Query: 446 CQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXX 625 + F +I G + + M+ G + VR++F++A+ +APC++F DE+D++ QR Sbjct: 209 AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGH 268 Query: 626 XXXXRVLNQLLTEMDG 673 + LNQ+L EMDG Sbjct: 269 DEREQTLNQMLVEMDG 284
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 118 bits (295), Expect = 2e-26 Identities = 56/136 (41%), Positives = 84/136 (61%) Frame = +2 Query: 266 SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 445 ++ D+ G + K E+ E V+Y + P +F+K G KGVL GPPG GKTLLAKAIA E Sbjct: 150 TFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE 208 Query: 446 CQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXX 625 + F +I G + + M+ G + VR++F++A+ +APC++F DE+D++ QR Sbjct: 209 AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGH 268 Query: 626 XXXXRVLNQLLTEMDG 673 + LNQ+L EMDG Sbjct: 269 DEREQTLNQMLVEMDG 284
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 118 bits (295), Expect = 2e-26 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 5/147 (3%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 +V ++ +GGL N L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A Sbjct: 253 SVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALA 312 Query: 440 NEC-----QANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 NEC + F KG + L+ W GESE +R +FD+A P ++FFDE+D +A R Sbjct: 313 NECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRS 372 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNAK 685 +++ LL MDG++++ Sbjct: 373 SRQDQIHSS---IVSTLLALMDGLDSR 396 Score = 36.6 bits (83), Expect = 0.073 Identities = 26/97 (26%), Positives = 46/97 (47%) Frame = +2 Query: 56 GYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSAL 235 GY GAD+ ++C EAAL +R + I E + + L+S+ ++ F+ A+ P++ Sbjct: 464 GYRGADIKSICAEAALCALRRRYPQIYTTSEKLQLD-LSSINISAKDFEVAMQKMIPASQ 522 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 346 R +S L+N ++ E +Q H E Sbjct: 523 RAVTSPGQALSTVVKPLLQNTVDKILEALQRVFPHAE 559
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 118 bits (295), Expect = 2e-26 Identities = 57/145 (39%), Positives = 93/145 (64%), Gaps = 5/145 (3%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 NV+++DIGGL+N +L+E V P+ +PE ++ F ++P +GVLF+GPPG GKTL+A+A+A Sbjct: 409 NVNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALA 468 Query: 440 NECQAN-----FISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 C ++ F KG ++L+ W GE+E +R +F++A+ P ++FFDE+D +A R Sbjct: 469 ASCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRS 528 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMN 679 +++ LL MDGM+ Sbjct: 529 SKQEQIHAS---IVSTLLALMDGMD 550 Score = 34.7 bits (78), Expect = 0.28 Identities = 24/65 (36%), Positives = 33/65 (50%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 T GY GADL +LCTEAAL I+ I ++ + + + + V F AL PS Sbjct: 618 TKGYGGADLRSLCTEAALISIQRSFPQIYRSNDKLLVD-PSKIKVKVSDFMLALKKIVPS 676 Query: 230 ALRET 244 + R T Sbjct: 677 SARST 681
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 118 bits (295), Expect = 2e-26 Identities = 60/147 (40%), Positives = 90/147 (61%), Gaps = 5/147 (3%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 +V ++ +GGL N L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A Sbjct: 422 SVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALA 481 Query: 440 NEC-----QANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 NEC + F KG + L+ W GESE +R +FD+A P ++FFDE+D +A R Sbjct: 482 NECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRS 541 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNAK 685 +++ LL MDG++++ Sbjct: 542 SRQDQIHSS---IVSTLLALMDGLDSR 565 Score = 37.4 bits (85), Expect = 0.043 Identities = 26/97 (26%), Positives = 46/97 (47%) Frame = +2 Query: 56 GYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSAL 235 GY GAD+ ++C EAAL +R + I E + + L+S+ ++ F+ A+ P++ Sbjct: 633 GYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLD-LSSINISAKDFEVAMQKMIPASQ 691 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 346 R +S L+N ++ E +Q H E Sbjct: 692 RAVTSPGQALSTVVKPLLQNTVDKILEALQRVFPHAE 728
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 117 bits (294), Expect = 2e-26 Identities = 59/145 (40%), Positives = 86/145 (59%), Gaps = 2/145 (1%) Frame = +2 Query: 251 EVPN--VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 EVP VS+ D+ G + K ELQE V + +++P+K+ G KG L GPPG GKTLL Sbjct: 253 EVPETGVSFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 311 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++ QR Sbjct: 312 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRG 371 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMN 679 + +NQLLTEMDG + Sbjct: 372 AGMGGGNDEREQTINQLLTEMDGFS 396
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 117 bits (293), Expect = 3e-26 Identities = 58/140 (41%), Positives = 83/140 (59%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 +V ++D+ G E K E+ E V + +++P++++ G KG + GPPG GKTLLAKA A Sbjct: 304 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 362 Query: 440 NECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXX 619 E FI++ G E L M+ G A VR++F AR +APC+LF DE+D++ +R Sbjct: 363 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFG 422 Query: 620 XXXXXXRVLNQLLTEMDGMN 679 LNQLL EMDG N Sbjct: 423 GQSEQENTLNQLLVEMDGFN 442
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 117 bits (293), Expect = 3e-26 Identities = 57/138 (41%), Positives = 84/138 (60%) Frame = +2 Query: 269 WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC 448 ++D+ G + K+EL E V++ ++ P KF G KGVL GPPG GKTLLA+A+A E Sbjct: 165 FKDVAGADEEKQELVEVVEF-LKDPRKFSAIGARIPKGVLLVGPPGTGKTLLARAVAGEA 223 Query: 449 QANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXX 628 F SI G + + M+ G + VR++F+ A+ +APC++F DE+D++ QR Sbjct: 224 GVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHD 283 Query: 629 XXXRVLNQLLTEMDGMNA 682 + LNQLL EMDG +A Sbjct: 284 EREQTLNQLLVEMDGFSA 301
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 117 bits (293), Expect = 3e-26 Identities = 58/140 (41%), Positives = 83/140 (59%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 +V ++D+ G E K E+ E V + +++P++++ G KG + GPPG GKTLLAKA A Sbjct: 303 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 361 Query: 440 NECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXX 619 E FI++ G E L M+ G A VR++F AR +APC+LF DE+D++ +R Sbjct: 362 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFG 421 Query: 620 XXXXXXRVLNQLLTEMDGMN 679 LNQLL EMDG N Sbjct: 422 GQSEQENTLNQLLVEMDGFN 441
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 116 bits (291), Expect = 6e-26 Identities = 58/145 (40%), Positives = 86/145 (59%), Gaps = 2/145 (1%) Frame = +2 Query: 251 EVPN--VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 EVP V++ D+ G + K ELQE V + +++P+K+ G KG L GPPG GKTLL Sbjct: 244 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 302 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++ QR Sbjct: 303 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRG 362 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMN 679 + +NQLLTEMDG + Sbjct: 363 AGMGGGNDEREQTINQLLTEMDGFS 387
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 116 bits (291), Expect = 6e-26 Identities = 58/145 (40%), Positives = 86/145 (59%), Gaps = 2/145 (1%) Frame = +2 Query: 251 EVPN--VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 EVP V++ D+ G + K ELQE V + +++P+K+ G KG L GPPG GKTLL Sbjct: 244 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 302 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++ QR Sbjct: 303 ARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRG 362 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMN 679 + +NQLLTEMDG + Sbjct: 363 AGLGGGNDEREQTINQLLTEMDGFS 387
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 116 bits (291), Expect = 6e-26 Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 5/147 (3%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 +V ++ +GGL + L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A Sbjct: 77 SVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALA 136 Query: 440 NEC-----QANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 NEC + F KG + L+ W GESE +R +FD+A P ++FFDE+D +A R Sbjct: 137 NECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLAPVRS 196 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNAK 685 +++ LL MDG++++ Sbjct: 197 SRQDQIHSS---IVSTLLALMDGLDSR 220 Score = 37.7 bits (86), Expect = 0.033 Identities = 20/61 (32%), Positives = 34/61 (55%) Frame = +2 Query: 56 GYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSAL 235 GY GAD+ ++C EAAL +R + I E + + L+S+ ++ F+ AL P++ Sbjct: 288 GYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLD-LSSITISAKDFEAALQKIRPASQ 346 Query: 236 R 238 R Sbjct: 347 R 347
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 116 bits (290), Expect = 7e-26 Identities = 64/147 (43%), Positives = 87/147 (59%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 R+ + + PN+ W+DI LE K+ L+E V P+ PE F+ P KGVL GPPG GK Sbjct: 194 RDIISQNPNIRWDDIADLEEAKKLLKEAVVLPMWMPEFFKGI-RRPWKGVLMVGPPGTGK 252 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 TLLAKA+A EC+ F +I L + + GESE VR +F+ AR AP +F DE+DSI + Sbjct: 253 TLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICS 312 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGM 676 +R RV +LL +MDG+ Sbjct: 313 RR--GTSEEHEASRRVKAELLVQMDGV 337
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 116 bits (290), Expect = 7e-26 Identities = 64/148 (43%), Positives = 86/148 (58%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 R+ V PNV W DI GL KR L+E V P+ P+ F+ P KGVL GPPG GK Sbjct: 222 RDIVQRNPNVHWADIAGLTEAKRLLEEAVVLPLWMPDYFKGI-RRPWKGVLMVGPPGTGK 280 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 T+LAKA+A EC F ++ L + + GESE VR +F+ AR AP +F DE+DSI + Sbjct: 281 TMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICS 340 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 +R RV ++LL +MDG++ Sbjct: 341 KR--GTGSEHEASRRVKSELLIQMDGVS 366
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 116 bits (290), Expect = 7e-26 Identities = 58/145 (40%), Positives = 86/145 (59%), Gaps = 2/145 (1%) Frame = +2 Query: 251 EVPN--VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 EVP V++ D+ G + K ELQE V + +++P+K+ G KG L GPPG GKTLL Sbjct: 241 EVPETGVTFGDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 299 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++ QR Sbjct: 300 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRG 359 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMN 679 + +NQLLTEMDG + Sbjct: 360 AGMGGGNDEREQTINQLLTEMDGFS 384
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 115 bits (289), Expect = 9e-26 Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 1/141 (0%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V+++D+ G+E K EL E V + ++ P+++ G KGVL GPPG GKTLLAKA A Sbjct: 171 VTFDDVAGVEEAKTELSEVVDF-LKFPQRYTALGAKIPKGVLLVGPPGTGKTLLAKAAAG 229 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXX-XXXX 619 E F I G E + ++ G A VR++F++A+ APC++F DELD+I R Sbjct: 230 EAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFIDELDAIGKSRASGAFMG 289 Query: 620 XXXXXXRVLNQLLTEMDGMNA 682 + LNQLLTEMDG +A Sbjct: 290 GNDEREQTLNQLLTEMDGFSA 310 Score = 31.2 bits (69), Expect = 3.1 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLED 145 T G+ GADLA L EAAL R K D + D Sbjct: 377 TPGFAGADLANLVNEAALLAARNKQDSVTEAD 408
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 115 bits (289), Expect = 9e-26 Identities = 56/146 (38%), Positives = 85/146 (58%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V E P ++ D+GGL+ EL E + P++ +KF+ G+ KG L YGPPG GKTLL Sbjct: 172 VDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLL 231 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 A+A A + A F+ + P+L+ M+ GE VR+ F A+ AP ++F DELD+I T+R Sbjct: 232 ARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRF 291 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNA 682 R + +LL ++DG ++ Sbjct: 292 DSEKSGDREVQRTMLELLNQLDGFSS 317
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 115 bits (289), Expect = 9e-26 Identities = 56/146 (38%), Positives = 84/146 (57%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V E P + DIGGL EL E + P++ +KF K G+ P KG L +GPPG GKTLL Sbjct: 176 VDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLL 235 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 A+A A + A F+ + P+L+ M+ G+ VR+ F A+ +P ++F DELD+I T+R Sbjct: 236 ARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRF 295 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMNA 682 R + +LL ++DG ++ Sbjct: 296 DSEKAGDREVQRTMLELLNQLDGFSS 321
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 115 bits (288), Expect = 1e-25 Identities = 58/141 (41%), Positives = 82/141 (58%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 +V + D+ G E K E+ E V + +++P++++ G KG + GPPG GKTLLAKA A Sbjct: 170 DVRFADVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATA 228 Query: 440 NECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXX 619 E FI++ G E L M+ G A VR++F AR APC+LF DE+D+I +R Sbjct: 229 GEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLG 288 Query: 620 XXXXXXRVLNQLLTEMDGMNA 682 LNQ+L EMDG N+ Sbjct: 289 GQSEQENTLNQMLVEMDGFNS 309
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 115 bits (288), Expect = 1e-25 Identities = 54/149 (36%), Positives = 89/149 (59%) Frame = +2 Query: 227 SALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 406 S ++ ++P ++ D+ G++ EL E + +++P +++ G KGVL YGPPG Sbjct: 148 SRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDF-LQNPCRYQTLGAKIPKGVLLYGPPG 206 Query: 407 CGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDS 586 GKTLLA+A+A E F +I G + + M+ G + VR++FD+A+ ++PC++F DE+D+ Sbjct: 207 TGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDA 266 Query: 587 IATQRXXXXXXXXXXXXRVLNQLLTEMDG 673 + QR + LNQLL EMDG Sbjct: 267 VGRQRGTGLGGGHDEREQTLNQLLVEMDG 295
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 115 bits (288), Expect = 1e-25 Identities = 53/149 (35%), Positives = 89/149 (59%) Frame = +2 Query: 227 SALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 406 S ++ ++P ++ D+ G++ EL E + +++P +++ G KGVL YGPPG Sbjct: 148 SRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDF-LQNPSRYQALGAKIPKGVLLYGPPG 206 Query: 407 CGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDS 586 GKTLLA+A+A E F +I G + + M+ G + VR++F++A+ ++PC++F DE+D+ Sbjct: 207 TGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDA 266 Query: 587 IATQRXXXXXXXXXXXXRVLNQLLTEMDG 673 + QR + LNQLL EMDG Sbjct: 267 VGRQRGAGLGGGHDEREQTLNQLLVEMDG 295
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 115 bits (288), Expect = 1e-25 Identities = 53/149 (35%), Positives = 89/149 (59%) Frame = +2 Query: 227 SALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 406 S ++ ++P ++ D+ G++ EL E + +++P +++ G KGVL YGPPG Sbjct: 148 SRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDF-LQNPSRYQALGAKIPKGVLLYGPPG 206 Query: 407 CGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDS 586 GKTLLA+A+A E F +I G + + M+ G + VR++F++A+ ++PC++F DE+D+ Sbjct: 207 TGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDA 266 Query: 587 IATQRXXXXXXXXXXXXRVLNQLLTEMDG 673 + QR + LNQLL EMDG Sbjct: 267 VGRQRGAGLGGGHDEREQTLNQLLVEMDG 295
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 114 bits (285), Expect = 3e-25 Identities = 57/142 (40%), Positives = 84/142 (59%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 439 +V +++I GL+ K EL E V Y +++P K+ + G +GV+ YGPPG GKTLLAKA+A Sbjct: 224 SVRFDNIAGLQEEKHELLEIVDY-LKNPLKYAQMGARSPRGVILYGPPGTGKTLLAKAVA 282 Query: 440 NECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXX 619 E F G M G VR++F+KA+ +APC++F DE+DS+ ++R Sbjct: 283 GEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELS 342 Query: 620 XXXXXXRVLNQLLTEMDGMNAK 685 + LNQLL EMDG ++ Sbjct: 343 SYSVVEQTLNQLLAEMDGFTSR 364
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 114 bits (285), Expect = 3e-25 Identities = 59/142 (41%), Positives = 87/142 (61%) Frame = +2 Query: 248 VEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 427 V++ NV++E + G+E K+ELQE V++ +++P+KF G KG+L GPPG GKTLLA Sbjct: 273 VQMKNVTFEHVKGVEEAKQELQEVVEF-LKNPQKFTVLGGKLPKGILLVGPPGTGKTLLA 331 Query: 428 KAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXX 607 +A+A E F G E M+ G + +R +F +A+ +APCV+F DELDS+ +R Sbjct: 332 RAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR-- 389 Query: 608 XXXXXXXXXXRVLNQLLTEMDG 673 + +NQLL EMDG Sbjct: 390 IESPMHPYSRQTINQLLAEMDG 411
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 114 bits (284), Expect = 4e-25 Identities = 54/139 (38%), Positives = 84/139 (60%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V++ D+ G + K E+ E V + + P KF+ G KG+L GPPG GKTLLA+AIA Sbjct: 148 VTFADVAGCDEAKEEVGEIVDF-LRDPNKFQNLGGKIPKGILMVGPPGTGKTLLARAIAG 206 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E + F +I G + + M+ G + VR++F++A+ +APC++F DE+D++ QR Sbjct: 207 EAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGG 266 Query: 623 XXXXXRVLNQLLTEMDGMN 679 + LNQ+L EMDG + Sbjct: 267 HDEREQTLNQMLVEMDGFS 285
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 114 bits (284), Expect = 4e-25 Identities = 59/142 (41%), Positives = 87/142 (61%) Frame = +2 Query: 248 VEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 427 V++ NV++E + G+E K+ELQE V++ +++P+KF G KG+L GPPG GKTLLA Sbjct: 331 VQMKNVTFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPKGILLVGPPGTGKTLLA 389 Query: 428 KAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXX 607 +A+A E F G E M+ G + +R +F +A+ +APCV+F DELDS+ +R Sbjct: 390 RAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR-- 447 Query: 608 XXXXXXXXXXRVLNQLLTEMDG 673 + +NQLL EMDG Sbjct: 448 IESPMHPYSRQTINQLLAEMDG 469
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 114 bits (284), Expect = 4e-25 Identities = 57/145 (39%), Positives = 84/145 (57%), Gaps = 2/145 (1%) Frame = +2 Query: 251 EVPN--VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 EVP V++ D+ G + K ELQE V + +++P+K+ G KG L GPPG GKTLL Sbjct: 221 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 279 Query: 425 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRX 604 A+A+A E F S E + ++ G + VR +F+ A+ APC++F DE+D++ QR Sbjct: 280 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFIDEIDAVGRQRG 339 Query: 605 XXXXXXXXXXXRVLNQLLTEMDGMN 679 + +NQLLTEMDG + Sbjct: 340 AGLGGGNDEREQTINQLLTEMDGFS 364
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 113 bits (282), Expect = 6e-25 Identities = 57/141 (40%), Positives = 82/141 (58%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V + +I GL+ K EL E V Y +++P K+ + G +GV+ YGPPG GKTLLAKA+A Sbjct: 228 VKFTNIAGLQEEKHELLEIVDY-LKNPLKYAQMGARSPRGVILYGPPGTGKTLLAKAVAG 286 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E F G M G VR++F+KA+ +APC++F DE+DS+ ++R Sbjct: 287 EAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSS 346 Query: 623 XXXXXRVLNQLLTEMDGMNAK 685 + LNQLL EMDG ++ Sbjct: 347 YSVVEQTLNQLLAEMDGFTSR 367
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 112 bits (281), Expect = 8e-25 Identities = 63/147 (42%), Positives = 85/147 (57%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 R+ + + PNV W DI L K+ LQE V P+ PE F+ P KGVL GPPG GK Sbjct: 197 RDIISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFKGI-RRPWKGVLMVGPPGTGK 255 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 TLLAKA+A EC+ F ++ L + + GESE VR +F+ AR +P +F DE+DSI + Sbjct: 256 TLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICS 315 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGM 676 +R RV +LL +MDG+ Sbjct: 316 RR--GTSEEHEASRRVKAELLVQMDGV 340
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 112 bits (281), Expect = 8e-25 Identities = 62/147 (42%), Positives = 86/147 (58%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 R+ + + PNV W+DI L K+ L+E V P+ PE F+ P KGVL GPPG GK Sbjct: 197 RDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGI-RRPWKGVLMVGPPGTGK 255 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 TLLAKA+A EC+ F ++ L + + GESE VR +F+ AR +P +F DE+DSI + Sbjct: 256 TLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICS 315 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGM 676 +R RV +LL +MDG+ Sbjct: 316 RR--GTSEEHEASRRVKAELLVQMDGV 340
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 111 bits (278), Expect = 2e-24 Identities = 60/154 (38%), Positives = 86/154 (55%), Gaps = 1/154 (0%) Frame = +2 Query: 227 SALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 406 SA + E PNV + D+ G E K E+ E V + +++PE++ G KGVL GPPG Sbjct: 155 SAKKLINAEKPNVRFNDMAGNEEAKEEVVEIVDF-LKYPERYANLGAKIPKGVLLVGPPG 213 Query: 407 CGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDS 586 GKTLLAKA+A E F S+ G + M+ G + VR++F+ A+ AP ++F DE+D+ Sbjct: 214 TGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDA 273 Query: 587 IATQRXX-XXXXXXXXXXRVLNQLLTEMDGMNAK 685 I R + LNQLL EMDG ++ Sbjct: 274 IGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSE 307
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 111 bits (278), Expect = 2e-24 Identities = 60/154 (38%), Positives = 86/154 (55%), Gaps = 1/154 (0%) Frame = +2 Query: 227 SALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 406 SA + E PNV + D+ G E K E+ E V + +++PE++ G KGVL GPPG Sbjct: 155 SAKKLINAEKPNVRFNDMAGNEEAKEEVVEIVDF-LKYPERYANLGAKIPKGVLLVGPPG 213 Query: 407 CGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDS 586 GKTLLAKA+A E F S+ G + M+ G + VR++F+ A+ AP ++F DE+D+ Sbjct: 214 TGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDA 273 Query: 587 IATQRXX-XXXXXXXXXXRVLNQLLTEMDGMNAK 685 I R + LNQLL EMDG ++ Sbjct: 274 IGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSE 307
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 111 bits (278), Expect = 2e-24 Identities = 62/147 (42%), Positives = 85/147 (57%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 R+ + + PNV W DI L K+ LQE V P+ PE F+ P KGVL GPPG GK Sbjct: 197 RDIISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFKGI-RRPWKGVLMVGPPGTGK 255 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 TLLAKA+A EC+ F ++ L + + GESE VR +F+ AR +P +F DE+DSI + Sbjct: 256 TLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICS 315 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGM 676 +R R+ +LL +MDG+ Sbjct: 316 RR--GTSEEHEASRRMKAELLVQMDGV 340 Score = 29.6 bits (65), Expect = 9.0 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = +2 Query: 56 GYVGADLAALCTEAALQCIREKMDIIDLED-ETIDAEILNSMAVTNDHFKTAL 211 GY GAD+ +C +A+L +R +++ + E+ + E ++ M T + F+ AL Sbjct: 415 GYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREAMH-MPTTMEDFEMAL 466
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 111 bits (278), Expect = 2e-24 Identities = 57/137 (41%), Positives = 81/137 (59%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V + D+ G E K+EL E V++ ++ P++F K G GVL GPPG GKTLLAKA+A Sbjct: 184 VRFSDVAGAEEEKQELVEVVEF-LKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAG 242 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E F SI G + + M+ G + VR +F+ A+ +AP ++F DE+D++ QR Sbjct: 243 EAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGG 302 Query: 623 XXXXXRVLNQLLTEMDG 673 + LNQLL EMDG Sbjct: 303 NDEREQTLNQLLIEMDG 319 Score = 31.6 bits (70), Expect = 2.4 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLED 145 T G+VGADL + EAAL R IID D Sbjct: 388 TPGFVGADLENVLNEAALVAARRNKSIIDASD 419
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 111 bits (278), Expect = 2e-24 Identities = 57/137 (41%), Positives = 81/137 (59%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V + D+ G E K+EL E V++ ++ P++F K G GVL GPPG GKTLLAKA+A Sbjct: 184 VRFSDVAGAEEEKQELVEVVEF-LKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAG 242 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E F SI G + + M+ G + VR +F+ A+ +AP ++F DE+D++ QR Sbjct: 243 EAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGG 302 Query: 623 XXXXXRVLNQLLTEMDG 673 + LNQLL EMDG Sbjct: 303 NDEREQTLNQLLIEMDG 319 Score = 31.6 bits (70), Expect = 2.4 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLED 145 T G+VGADL + EAAL R IID D Sbjct: 388 TPGFVGADLENVLNEAALVAARRNKSIIDASD 419
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 111 bits (277), Expect = 2e-24 Identities = 61/147 (41%), Positives = 86/147 (58%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 R+ V P++ W+DI LE K+ L+E V P+ P+ F+ P KGVL GPPG GK Sbjct: 194 RDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGI-RRPWKGVLMVGPPGTGK 252 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 T+LAKA+A EC F ++ L + + GESE VR +F+ AR AP +F DE+DSI + Sbjct: 253 TMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICS 312 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGM 676 +R RV ++LL +MDG+ Sbjct: 313 RR--GTSDEHEASRRVKSELLIQMDGV 337 Score = 30.8 bits (68), Expect = 4.0 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTAL 211 T GY GAD+ +C +A+L +R +++ + E+ ++ M VT + AL Sbjct: 410 TEGYSGADITNICRDASLMAMRRRINGLSPEEIRALSKEELQMPVTRGDLELAL 463
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 111 bits (277), Expect = 2e-24 Identities = 61/147 (41%), Positives = 86/147 (58%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 R+ V P++ W+DI LE K+ L+E V P+ P+ F+ P KGVL GPPG GK Sbjct: 194 RDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGI-RRPWKGVLMVGPPGTGK 252 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 T+LAKA+A EC F ++ L + + GESE VR +F+ AR AP +F DE+DSI + Sbjct: 253 TMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICS 312 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGM 676 +R RV ++LL +MDG+ Sbjct: 313 RR--GTSDEHEASRRVKSELLIQMDGV 337 Score = 30.8 bits (68), Expect = 4.0 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTAL 211 T GY GAD+ +C +A+L +R +++ + E+ ++ M VT + AL Sbjct: 410 TEGYSGADITNICRDASLMAMRRRINGLSPEEIRALSKEELQMPVTRGDLELAL 463
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 111 bits (277), Expect = 2e-24 Identities = 61/147 (41%), Positives = 86/147 (58%) Frame = +2 Query: 236 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 415 R+ V P++ W+DI LE K+ L+E V P+ P+ F+ P KGVL GPPG GK Sbjct: 196 RDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGI-RRPWKGVLMVGPPGTGK 254 Query: 416 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 T+LAKA+A EC F ++ L + + GESE VR +F+ AR AP +F DE+DSI + Sbjct: 255 TMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICS 314 Query: 596 QRXXXXXXXXXXXXRVLNQLLTEMDGM 676 +R RV ++LL +MDG+ Sbjct: 315 RR--GTSDEHEASRRVKSELLIQMDGV 339 Score = 30.8 bits (68), Expect = 4.0 Identities = 16/52 (30%), Positives = 29/52 (55%) Frame = +2 Query: 56 GYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTAL 211 GY GAD+ +C +A+L +R +++ + E+ ++ M VT F+ AL Sbjct: 414 GYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQMPVTKGDFELAL 465
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 110 bits (275), Expect = 4e-24 Identities = 58/142 (40%), Positives = 86/142 (60%) Frame = +2 Query: 248 VEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 427 V++ NV++E + G+E K+ELQE V++ +++P+KF G KG+L GPPG GKTLLA Sbjct: 273 VQMKNVTFEHVKGVEEAKQELQEVVEF-LKNPQKFTVLGGKLPKGILLVGPPGTGKTLLA 331 Query: 428 KAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXX 607 +A+A E F G E M+ G + +R +F +A+ +APCV+F DELDS+ +R Sbjct: 332 RAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR-- 389 Query: 608 XXXXXXXXXXRVLNQLLTEMDG 673 + + QLL EMDG Sbjct: 390 IEFPMHPYSRQTIIQLLAEMDG 411
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 110 bits (274), Expect = 5e-24 Identities = 56/137 (40%), Positives = 81/137 (59%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 V + D+ G E K+EL E V + +++P+K+ G GVL GPPG GKTLLAKA+A Sbjct: 190 VRFADVAGSEEEKQELVEVVDF-LKNPKKYHDLGARIPAGVLLEGPPGTGKTLLAKAVAG 248 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E F SI G + + M+ G + VR++F+ A+ +AP ++F DE+D++ QR Sbjct: 249 EAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAVGRQRGAGLGGG 308 Query: 623 XXXXXRVLNQLLTEMDG 673 + LNQLL EMDG Sbjct: 309 NDEREQTLNQLLVEMDG 325
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 109 bits (273), Expect = 7e-24 Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 1/145 (0%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V+E PNV W D+ GLE K L+E V P++ P F +P +G+L +GPPG GK+ L Sbjct: 125 VIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTG-KRTPWRGILLFGPPGTGKSYL 183 Query: 425 AKAIANECQ-ANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR 601 AKA+A E + F SI +L++ W GESE V+ +F AR + P ++F DE+DS+ R Sbjct: 184 AKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSR 243 Query: 602 XXXXXXXXXXXXRVLNQLLTEMDGM 676 R+ + L +M G+ Sbjct: 244 ---SENESEAARRIKTEFLVQMQGV 265
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 109 bits (273), Expect = 7e-24 Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 1/145 (0%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V+E PNV W D+ GLE K L+E V P++ P F +P +G+L +GPPG GK+ L Sbjct: 125 VIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTG-KRTPWRGILLFGPPGTGKSYL 183 Query: 425 AKAIANECQ-ANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR 601 AKA+A E + F SI +L++ W GESE V+ +F AR + P ++F DE+DS+ R Sbjct: 184 AKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSR 243 Query: 602 XXXXXXXXXXXXRVLNQLLTEMDGM 676 R+ + L +M G+ Sbjct: 244 ---SENESEAARRIKTEFLVQMQGV 265
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 109 bits (272), Expect = 9e-24 Identities = 60/165 (36%), Positives = 92/165 (55%), Gaps = 3/165 (1%) Frame = +2 Query: 200 KTALTTSNPSALRETV---VEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS 370 K L + P L + + E +VS+ D+ G + VK+EL + V++ + +PEKF + G Sbjct: 139 KKTLVGTFPKFLDQNIGSFAENTDVSFSDVQGCDEVKKELVDVVEF-LRNPEKFNQIGAK 197 Query: 371 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGS 550 KGVL GPPG GKTLLAKA++ E Q F+ G + G + +R++F A+ + Sbjct: 198 LPKGVLLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQN 257 Query: 551 APCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 +PC++F DE+DS+ R + +NQLL EMDG +K Sbjct: 258 SPCLVFIDEIDSVGGNR--TFSPHHPFANQTINQLLAEMDGFQSK 300
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 108 bits (271), Expect = 1e-23 Identities = 54/123 (43%), Positives = 75/123 (60%) Frame = +2 Query: 233 LRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 412 L E +V V WEDI GL N K L+E V YP P+ F+ P +G+L +GPPG G Sbjct: 458 LNEILVTDEKVYWEDIAGLRNAKNSLKEAVVYPFLRPDLFKGL-REPVRGMLLFGPPGTG 516 Query: 413 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA 592 KT++AKA+A E + F S+ LL+ + GESE VR +F A+ +P ++F DE+DS+ Sbjct: 517 KTMIAKAVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSML 576 Query: 593 TQR 601 T R Sbjct: 577 TAR 579 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/74 (28%), Positives = 36/74 (48%) Frame = +2 Query: 26 NWNIFQXXTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKT 205 ++ + T G+ G+DL +L EAA++ IR DL D+ + A+ + F+ Sbjct: 672 DYELITEMTEGFSGSDLTSLAKEAAMEPIR------DLGDKLMFADFDKIRGIEIKDFQN 725 Query: 206 ALTTSNPSALRETV 247 AL T S E++ Sbjct: 726 ALLTIKKSVSSESL 739
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 108 bits (270), Expect = 2e-23 Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGM--SPSKGVLFYGPPGCGKTLLAKA 433 N++++DIGGL+ + +L E+V YP+ PE + + +PS GVL YGPPGCGKT+LAKA Sbjct: 87 NITFQDIGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPS-GVLLYGPPGCGKTMLAKA 145 Query: 434 IANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR 601 +A E ANFISI+ ++ W+GES V +F A PC++F DE+DS +R Sbjct: 146 LAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLRER 201 Score = 31.2 bits (69), Expect = 3.1 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%) Frame = +2 Query: 50 THGYVGADLAALCTEAAL----QCIREKMDIIDLEDETIDAEILNSMAV 184 T G+ G+DL LC EAAL + I++K +ID TID +S+ + Sbjct: 290 TKGFSGSDLKELCREAALDAAKEYIKQKRQLID--SGTIDVNDTSSLKI 336
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 108 bits (270), Expect = 2e-23 Identities = 57/146 (39%), Positives = 82/146 (56%), Gaps = 1/146 (0%) Frame = +2 Query: 251 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 430 E P V + D+ G E K E+ E V + +++P+++ G KGVL GPPG GKTLLAK Sbjct: 169 EKPKVRFNDMAGNEEAKEEVVEIVDF-LKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAK 227 Query: 431 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXX- 607 A+A E F S+ G + M+ G + VR++FD A+ AP ++F DE+D+I R Sbjct: 228 AVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDAIGKSRAAG 287 Query: 608 XXXXXXXXXXRVLNQLLTEMDGMNAK 685 + LNQLL EMDG ++ Sbjct: 288 GMISGNDEREQTLNQLLAEMDGFGSE 313
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 107 bits (268), Expect = 3e-23 Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 1/145 (0%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V+E PN+ W D+ GLE K L+E V P++ P F +P +G+L +GPPG GK+ L Sbjct: 118 VMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTG-KRTPWRGILLFGPPGTGKSYL 176 Query: 425 AKAIANECQ-ANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR 601 AKA+A E + F S+ +L++ W GESE V+ +F+ AR P ++F DE+DS+ R Sbjct: 177 AKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSR 236 Query: 602 XXXXXXXXXXXXRVLNQLLTEMDGM 676 R+ + L +M G+ Sbjct: 237 ---NENESEAARRIKTEFLVQMQGV 258
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 107 bits (268), Expect = 3e-23 Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 1/145 (0%) Frame = +2 Query: 245 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 424 V+E PN+ W D+ GLE K L+E V P++ P F +P +G+L +GPPG GK+ L Sbjct: 118 VMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTG-KRTPWRGILLFGPPGTGKSYL 176 Query: 425 AKAIANECQ-ANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR 601 AKA+A E + F S+ +L++ W GESE V+ +F+ AR P ++F DE+DS+ R Sbjct: 177 AKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSR 236 Query: 602 XXXXXXXXXXXXRVLNQLLTEMDGM 676 R+ + L +M G+ Sbjct: 237 ---NENESEAARRIKTEFLVQMQGV 258
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 107 bits (267), Expect = 3e-23 Identities = 55/129 (42%), Positives = 78/129 (60%) Frame = +2 Query: 287 LENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS 466 ++ K E++E V Y ++ PEK+ + G KGVL GPPG GKTLLA+AIA E Q F Sbjct: 206 MDEAKLEVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFH 264 Query: 467 IKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVL 646 G E + G+ VR++FDKA+ APC++F DE+DS+ ++R + + Sbjct: 265 TAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKR--VSNSIHPYANQTI 322 Query: 647 NQLLTEMDG 673 NQLL+EMDG Sbjct: 323 NQLLSEMDG 331
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 107 bits (267), Expect = 3e-23 Identities = 54/139 (38%), Positives = 82/139 (58%), Gaps = 2/139 (1%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 +S++++ G + K+E+ E V + +++P K+ K G +G + GPPG GKTLLAKA A Sbjct: 285 ISFKNVAGCDEAKQEIMEFVHF-LKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAG 343 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E F+S+ G E + M+ G + VR++F +AR AP ++F DE+D+I +R Sbjct: 344 EANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALG 403 Query: 623 XXXXXR--VLNQLLTEMDG 673 R LNQLL EMDG Sbjct: 404 GANDEREATLNQLLVEMDG 422
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 104 bits (260), Expect = 2e-22 Identities = 59/159 (37%), Positives = 87/159 (54%) Frame = +2 Query: 203 TALTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKG 382 T L S+ A + V NV ++D+ G + + EL+E V + ++ P K+E G KG Sbjct: 258 TTLLKSSEVADKSVDVAKTNVKFDDVCGCDEARAELEEIVDF-LKDPTKYESLGGKLPKG 316 Query: 383 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCV 562 VL GPPG GKTLLA+A A E +F + G E ++ G +R++F +AR AP + Sbjct: 317 VLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAI 376 Query: 563 LFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 +F DELD+I +R + LNQLL E+DG + Sbjct: 377 IFIDELDAIGGKR---NPKDQAYAKQTLNQLLVELDGFS 412
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 104 bits (260), Expect = 2e-22 Identities = 63/185 (34%), Positives = 95/185 (51%), Gaps = 4/185 (2%) Frame = +2 Query: 140 EDETIDAEILNSMAVTNDHFKTALTTSNPSALR----ETVVEVPNVSWEDIGGLENVKRE 307 E+ ID ++L + D +L + A + E VV V W+DI GLE+ K Sbjct: 559 EEPEIDKKVLRE--ILEDEIIDSLQGVDRQAAKQIFAEIVVHGDEVHWDDIAGLESAKYS 616 Query: 308 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 487 L+E V YP P+ F P +G+L +GPPG GKT+LA+A+A E + F SI L Sbjct: 617 LKEAVVYPFLRPDLFRGL-REPVRGMLLFGPPGTGKTMLARAVATESHSTFFSISASSLT 675 Query: 488 TMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEM 667 + + GESE VR +F A+ +P ++F DE+DSI R R+ N+ L + Sbjct: 676 SKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSIMGSR--NNENENESSRRIKNEFLVQW 733 Query: 668 DGMNA 682 +++ Sbjct: 734 SSLSS 738 Score = 30.0 bits (66), Expect = 6.9 Identities = 20/79 (25%), Positives = 38/79 (48%) Frame = +2 Query: 17 TRGNWNIFQXXTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDH 196 T +++ T GY G+D+ +L +AA+ +R DL D+ ++ E + Sbjct: 812 TESDFDELVKITEGYSGSDITSLAKDAAMGPLR------DLGDKLLETEREMIRPIGLVD 865 Query: 197 FKTALTTSNPSALRETVVE 253 FK +L PS ++ +V+ Sbjct: 866 FKNSLVYIKPSVSQDGLVK 884
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 104 bits (260), Expect = 2e-22 Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 2/150 (1%) Frame = +2 Query: 236 RETVVEVPNVS--WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 R VE V+ + D+ G++ K EL E V + ++ P+K+ + G +GVL GPPG Sbjct: 127 RSAAVEEGKVTTRFADVAGVDEAKEELMEVVDF-LKFPKKYTEIGGKIPRGVLLVGPPGT 185 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 GKTLLA+A+A E F I G + + M+ G + VR++F +AR AP ++F DELD+I Sbjct: 186 GKTLLARAVAGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELDAI 245 Query: 590 ATQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 R + LNQLL EMDG + Sbjct: 246 GKSR-LNAIHSNDEREQTLNQLLVEMDGFD 274
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 102 bits (253), Expect = 1e-21 Identities = 57/159 (35%), Positives = 91/159 (57%) Frame = +2 Query: 200 KTALTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK 379 +T P + T + + +I G E K++ + ++Y +E+P+ F ++ K Sbjct: 102 ETVFKLQTPKKVLRT--QFKKAKFSEIIGQEEAKKKCRIIMKY-LENPKLFGEWA---PK 155 Query: 380 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPC 559 VLFYGPPG GKTL+A+A+A E ++FI +K PEL+ G++ +RE++ +A SAPC Sbjct: 156 NVLFYGPPGTGKTLMARALATETNSSFILVKAPELIGEHVGDASKMIRELYQRASESAPC 215 Query: 560 VLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGM 676 ++F DELD+I R V+N LLTE+DG+ Sbjct: 216 IVFIDELDAIGLSR--EYQSLRGDVSEVVNALLTELDGI 252
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 101 bits (252), Expect = 2e-21 Identities = 57/153 (37%), Positives = 81/153 (52%) Frame = +2 Query: 221 NPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 400 NP + +V+ + DI G + E+QE V Y +++P+K+ G KG+L GP Sbjct: 196 NPGKNQAVIVKTDK-KFTDIAGNKEPIEEVQELVDY-LKNPKKYAAAGARFPKGILLGGP 253 Query: 401 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDEL 580 PG GKTLLAKA A E F I + ++ G VRE+F +AR AP ++F DEL Sbjct: 254 PGTGKTLLAKATAGEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAIIFIDEL 313 Query: 581 DSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 D++ R + LNQ+L EMDG+N Sbjct: 314 DAVGRSRGSGIGGGNDEREQTLNQILVEMDGIN 346 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDII--DLEDETID 157 T GY GA L + EA+L +REK D+I DE ID Sbjct: 413 TPGYSGAQLENVINEASLLSVREKTDVIISTQIDEAID 450
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 101 bits (251), Expect = 2e-21 Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 1/138 (0%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 + ++D+ G + K E+ E V + ++ P ++EK G +G + GPPG GKTLLAKA A Sbjct: 345 IKFKDVAGCDEAKEEIMEFVSF-LKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAG 403 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR-XXXXXX 619 E F + G E + M+ G A VR++F AR +AP ++F DE+D+I R Sbjct: 404 EAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSG 463 Query: 620 XXXXXXRVLNQLLTEMDG 673 LNQ+L EMDG Sbjct: 464 ANDERENTLNQMLVEMDG 481 Score = 30.4 bits (67), Expect = 5.2 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +2 Query: 32 NIFQXXTHGYVGADLAALCTEAALQCIREKMDIIDL 139 N T G+ GAD+A +C EAAL R D + L Sbjct: 546 NRLAALTPGFSGADIANVCNEAALIAARSDEDAVKL 581
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 100 bits (248), Expect = 5e-21 Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 1/115 (0%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAI 436 +V+W DI GL++V +L++TV P++ FE + P KGVL YGPPGCGKTL+AKA Sbjct: 87 HVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKAT 146 Query: 437 ANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR 601 A E FI+++ L W+GES+ +F A P ++F DE+DS R Sbjct: 147 AKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR 201 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETID 157 T G+ G+DL +C +AAL C+RE ++ E D Sbjct: 291 TDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDED 326
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 100 bits (248), Expect = 5e-21 Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 1/115 (0%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAI 436 +V+W DI GL++V +L++TV P++ FE + P KGVL YGPPGCGKTL+AKA Sbjct: 87 HVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKAT 146 Query: 437 ANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR 601 A E FI+++ L W+GES+ +F A P ++F DE+DS R Sbjct: 147 AKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR 201 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETID 157 T G+ G+DL +C +AAL C+RE ++ E D Sbjct: 291 TDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDED 326
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 100 bits (248), Expect = 5e-21 Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 1/115 (0%) Frame = +2 Query: 260 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAI 436 +V+W DI GL++V +L++TV P++ FE + P KGVL YGPPGCGKTL+AKA Sbjct: 87 HVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKAT 146 Query: 437 ANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR 601 A E FI+++ L W+GES+ +F A P ++F DE+DS R Sbjct: 147 AKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR 201 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETID 157 T G+ G+DL +C +AAL C+RE ++ E D Sbjct: 291 TDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDED 326
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 99.0 bits (245), Expect = 1e-20 Identities = 55/141 (39%), Positives = 83/141 (58%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 +S +DI G+ +VK+ L E V P+ PE F+ SP K ++ GPPG GKTL+A+AIA+ Sbjct: 190 MSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGL-RSPWKAMVLAGPPGTGKTLIARAIAS 248 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRXXXXXXX 622 E + F ++ +L + W G+SE VR +F+ AR AP ++F DE+D++ QR Sbjct: 249 ESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQR--GNSGE 306 Query: 623 XXXXXRVLNQLLTEMDGMNAK 685 RV ++ L +MDG K Sbjct: 307 HEASRRVKSEFLVQMDGSQNK 327 Score = 37.7 bits (86), Expect = 0.033 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%) Frame = +2 Query: 26 NWNIFQXXTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDA--EILNSMAVTNDHF 199 N++ T G+ GAD+ +LC AA+ +R + D L + A E L + V N F Sbjct: 385 NYDDLAARTEGFSGADVVSLCRTAAINVLR-RYDTKSLRGGELTAAMESLKAELVRNIDF 443 Query: 200 KTALTTSNPSALRETVVE 253 + AL +PSA +T+++ Sbjct: 444 EAALQAVSPSAGPDTMLK 461
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 98.6 bits (244), Expect = 2e-20 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 1/114 (0%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIA 439 ++W DI GL+ V EL++TV P++ FE + P KGVL YGPPGCGKTL+AKA A Sbjct: 92 ITWHDIAGLDEVITELKDTVILPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKATA 151 Query: 440 NECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR 601 E FI+++ L W+GES+ +F A P ++F DE+DS R Sbjct: 152 KEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR 205 Score = 30.4 bits (67), Expect = 5.2 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIRE 118 T G+ G+DL +C +AAL C+R+ Sbjct: 295 TDGFSGSDLREMCRDAALLCVRD 317
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 98.2 bits (243), Expect = 2e-20 Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 1/114 (0%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIA 439 V+W D+ GL+ + E+Q+TV P + F + P KGVL YGPPGCGKTL+AKA A Sbjct: 91 VTWRDVAGLDEIISEMQDTVILPFQKRHLFSGSKLLQPPKGVLLYGPPGCGKTLIAKATA 150 Query: 440 NECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR 601 FI+++ L W+GES+ +F A PC++F DE+DS R Sbjct: 151 KASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNR 204 Score = 31.2 bits (69), Expect = 3.1 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 19/87 (21%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIRE-----------KMDIIDLEDETIDAEILNSMAVTNDH 196 + GY G+DL LC +AA+ +R+ + +D E+E +D+ L + + Sbjct: 294 SEGYSGSDLKELCRDAAMYRVRDYVRKQQMKQIAQQFQLDEEEEHVDSRQLRPVTQLDLL 353 Query: 197 F--------KTALTTSNPSALRETVVE 253 F K A T++P+ LRE ++ Sbjct: 354 FGLDKMRESKQATATTDPANLREVPLD 380
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 95.9 bits (237), Expect = 1e-19 Identities = 43/111 (38%), Positives = 65/111 (58%) Frame = +2 Query: 269 WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC 448 W++IGG E + EL++ + P+ + +SP +G+L YGPPGCGKTLLAKA+A Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 141 Query: 449 QANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR 601 FI+++ L W+GES+ +F A+ P ++F DE+DS R Sbjct: 142 GCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSFLRDR 192
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 95.1 bits (235), Expect = 2e-19 Identities = 56/150 (37%), Positives = 80/150 (53%) Frame = +2 Query: 233 LRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 412 + E V V ++DI G E K+ LQE V P PE F +P++G+L +GPPG G Sbjct: 327 MNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNG 385 Query: 413 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA 592 KT+LAKA+A E A F +I L + + GE E VR +F AR P ++F DE+DS+ Sbjct: 386 KTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLL 445 Query: 593 TQRXXXXXXXXXXXXRVLNQLLTEMDGMNA 682 +R R+ + L E DG+ + Sbjct: 446 CER---REGEHDASRRLKTEFLIEFDGVQS 472
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 94.0 bits (232), Expect = 4e-19 Identities = 55/150 (36%), Positives = 80/150 (53%) Frame = +2 Query: 233 LRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 412 + E V V ++DI G + K+ LQE V P PE F +P++G+L +GPPG G Sbjct: 329 MNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFTGL-RAPARGLLLFGPPGNG 387 Query: 413 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA 592 KT+LAKA+A E A F +I L + + GE E VR +F AR P ++F DE+DS+ Sbjct: 388 KTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLL 447 Query: 593 TQRXXXXXXXXXXXXRVLNQLLTEMDGMNA 682 +R R+ + L E DG+ + Sbjct: 448 CER---REGEHDASRRLKTEFLIEFDGVQS 474
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 89.0 bits (219), Expect = 1e-17 Identities = 60/183 (32%), Positives = 88/183 (48%), Gaps = 14/183 (7%) Frame = +2 Query: 170 NSMAVTNDHFKTALTTSNPSALRETVVEVPNVSWE----DIGGLENVKREL-QETVQYPV 334 NS ++L + +E + N W IGGL+ ++ + + V Sbjct: 180 NSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFAFRV 239 Query: 335 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS-IKGPELLTMWFGESE 511 PE E+ G KG+L YGPPGCGKTLLA+ I A + GPE+L + GESE Sbjct: 240 FPPEIVEQMGCIHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESE 299 Query: 512 ANVREIFDKAR--------GSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEM 667 AN+R++F A S ++ FDE+D+I QR V+NQLL+++ Sbjct: 300 ANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT-VVNQLLSKI 358 Query: 668 DGM 676 DG+ Sbjct: 359 DGV 361 Score = 38.1 bits (87), Expect = 0.025 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 2/76 (2%) Frame = +2 Query: 368 SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE--ANVREIFDKA 541 +P VL GPP GKT LA IA E FI I P+ + + F E+ +++IFD A Sbjct: 534 TPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKM-IGFSETAKCQAMKKIFDDA 592 Query: 542 RGSAPCVLFFDELDSI 589 S + D+++ + Sbjct: 593 YKSQLSCVVVDDIERL 608
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 87.8 bits (216), Expect = 3e-17 Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 14/183 (7%) Frame = +2 Query: 170 NSMAVTNDHFKTALTTSNPSALRETVVEVPNVSWE----DIGGLENVKREL-QETVQYPV 334 NS ++L + +E + N W IGGL+ ++ + V Sbjct: 180 NSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRV 239 Query: 335 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS-IKGPELLTMWFGESE 511 PE E+ G KG+L YGPPGCGKTLLA+ I A + GPE+L + GESE Sbjct: 240 FPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESE 299 Query: 512 ANVREIFDKAR--------GSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEM 667 AN+R++F A S ++ FDE+D+I QR V+NQLL+++ Sbjct: 300 ANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT-VVNQLLSKI 358 Query: 668 DGM 676 DG+ Sbjct: 359 DGV 361 Score = 37.0 bits (84), Expect = 0.056 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%) Frame = +2 Query: 368 SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE--ANVREIFDKA 541 +P VL GPP GKT +A IA E FI I P+ + + F E+ +++IFD A Sbjct: 534 TPLVSVLLEGPPHSGKTAVAAKIAEESNFPFIKICSPDKM-IGFSETAKCQAMKKIFDDA 592 Query: 542 RGSAPCVLFFDELDSI 589 S + D+++ + Sbjct: 593 YKSQLSCVVVDDIERL 608
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 87.8 bits (216), Expect = 3e-17 Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 14/183 (7%) Frame = +2 Query: 170 NSMAVTNDHFKTALTTSNPSALRETVVEVPNVSWE----DIGGLENVKREL-QETVQYPV 334 NS ++L + +E + N W IGGL+ ++ + V Sbjct: 180 NSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRV 239 Query: 335 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS-IKGPELLTMWFGESE 511 PE E+ G KG+L YGPPGCGKTLLA+ I A + GPE+L + GESE Sbjct: 240 FPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESE 299 Query: 512 ANVREIFDKAR--------GSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEM 667 AN+R++F A S ++ FDE+D+I QR V+NQLL+++ Sbjct: 300 ANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT-VVNQLLSKI 358 Query: 668 DGM 676 DG+ Sbjct: 359 DGV 361 Score = 38.1 bits (87), Expect = 0.025 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 2/76 (2%) Frame = +2 Query: 368 SPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE--ANVREIFDKA 541 +P VL GPP GKT LA IA E FI I P+ + + F E+ +++IFD A Sbjct: 534 TPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKM-IGFSETAKCQAMKKIFDDA 592 Query: 542 RGSAPCVLFFDELDSI 589 S + D+++ + Sbjct: 593 YKSQLSCVVVDDIERL 608
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 87.4 bits (215), Expect = 4e-17 Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 12/169 (7%) Frame = +2 Query: 209 LTTSNPSALRETVVEVPNVSWED--IGGLENVKREL-QETVQYPVEHPEKFEKFGMSPSK 379 L +SN R V P+ +ED +GGL+ ++ + + P EK G+S K Sbjct: 216 LKSSNSLRPRSNAVIRPDFKFEDLGVGGLDKEFTKIFRRAFASRIFPPSVIEKLGISHVK 275 Query: 380 GVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEANVREIFD------- 535 G+L YGPPG GKTL+A+ I A I GPE+L+ + G SE N+R +F Sbjct: 276 GLLLYGPPGTGKTLIARKIGTMLNAKEPKIVNGPEILSKYVGSSEENIRNLFKDAEAEYR 335 Query: 536 -KARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 K S+ ++ FDELDS+ QR V+NQLL +MDG++ Sbjct: 336 AKGEESSLHIIIFDELDSVFKQR-GSRGDGTGVGDNVVNQLLAKMDGVD 383 Score = 38.5 bits (88), Expect = 0.019 Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 6/186 (3%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 T + GA++ L A+ I + ++I ++ + + + VT + F AL P+ Sbjct: 454 TKNFSGAEIEGLVKSASSFAINKTVNI-GKGATKLNTKDIAKLKVTREDFLNALNDVTPA 512 Query: 230 ALRETVVEVPNVSWEDI-----GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFY 394 +S ED+ GG+ + ++ + + + S +L + Sbjct: 513 F---------GISEEDLKTCVEGGMMLYSERVNSILKNGARYVRQVRESDKSRLVSLLIH 563 Query: 395 GPPGCGKTLLAKAIANECQANFISIKGP-ELLTMWFGESEANVREIFDKARGSAPCVLFF 571 GP G GKT LA IA + FI + P EL M A + F A S +L Sbjct: 564 GPAGSGKTALAAEIALKSGFPFIRLISPNELSGMSESAKIAYIDNTFRDAYKSPLNILVI 623 Query: 572 DELDSI 589 D L+++ Sbjct: 624 DSLETL 629
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 86.7 bits (213), Expect = 6e-17 Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Frame = +2 Query: 236 RETVVEVPN-VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 412 RE EV + ++ +D+ G E+ K + + ++Y +E P++F + + VLF+G PG G Sbjct: 114 REEFHEVKSDITMDDVIGQEDAKIKCRIIMRY-LEDPDRFRDWA---PRNVLFHGSPGTG 169 Query: 413 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA 592 KT+LAK++ANE + IK L+ G+ + E+++ A +AP V+F DE+D+I Sbjct: 170 KTMLAKSLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIG 229 Query: 593 TQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 R V+N LLTEMDG+N Sbjct: 230 LDR--RFQSLRGDVSEVVNALLTEMDGIN 256
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 86.7 bits (213), Expect = 6e-17 Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 1/149 (0%) Frame = +2 Query: 236 RETVVEV-PNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 412 RE EV +++ +D+ G E+ K + + ++Y +E P++F + + VLF+G PG G Sbjct: 114 REEFHEVRSSITMDDVIGQEDAKIKCRIIMKY-LEDPDRFRDWA---PRNVLFHGSPGTG 169 Query: 413 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA 592 KT+LAK++ANE + IK L+ G+ + E+++ A +AP V+F DE+D+I Sbjct: 170 KTMLAKSLANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIG 229 Query: 593 TQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 R V+N LLTEMDG+N Sbjct: 230 LDR--RYQSLRGDVSEVVNALLTEMDGIN 256
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 84.3 bits (207), Expect = 3e-16 Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 14/168 (8%) Frame = +2 Query: 218 SNPSALRETVVEVPNVSWE----DIGGLENVKREL-QETVQYPVEHPEKFEKFGMSPSKG 382 S +R++++ N W+ IGGL+ + + V PE E+ G KG Sbjct: 199 SKGKVVRQSII---NPDWDFGKMGIGGLDKEFNSIFRRAFASRVFPPELVEQLGCKHVKG 255 Query: 383 VLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEANVREIFDKAR----- 544 +L YGPPG GKTL+A+ I A I GP++L + GESEANVR +F +A Sbjct: 256 ILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFAEAEEEEKR 315 Query: 545 ---GSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 S ++ FDE+D+I QR V+NQLLT++DG++ Sbjct: 316 LGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDT-VVNQLLTKIDGVD 362 Score = 36.6 bits (83), Expect = 0.073 Identities = 42/181 (23%), Positives = 71/181 (39%), Gaps = 1/181 (0%) Frame = +2 Query: 50 THGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPS 229 T + GA+L L AA ++ D + T+D E + + V D F +L Sbjct: 433 TKNFSGAELEGL-VRAAQSSAMNRLIKADAK-VTVDPEAMEKLKVNRDDFLHSLEHDIKP 490 Query: 230 ALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 409 A + N+ + L E V+ + E G+ VL G P Sbjct: 491 AFGTAQEILDNMLARGVINWGAPVSNLLEDGMLYVQQAKAPESSGLV---SVLVAGAPNS 547 Query: 410 GKTLLAKAIANECQANFISIKGPELLTMWFGESEA-NVREIFDKARGSAPCVLFFDELDS 586 GKT LA +A F+ + PE + + ++ ++R+IFD A S + D ++ Sbjct: 548 GKTALAAQLAKMSDFPFVKVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLSCIVVDNVER 607 Query: 587 I 589 + Sbjct: 608 L 608
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 84.0 bits (206), Expect = 4e-16 Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 15/156 (9%) Frame = +2 Query: 257 PNVSWED--IGGLEN----VKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 418 P +ED IGGL++ + R + +P P EK G++ KG+L YGPPG GKT Sbjct: 262 PGFKFEDMGIGGLDSEFSAIFRRAFASRLFP---PGMVEKLGINHVKGILLYGPPGTGKT 318 Query: 419 LLAKAIANECQANFISI-KGPELLTMWFGESEANVREIF--------DKARGSAPCVLFF 571 L+A+ I A I GPE+L + G+SE NVR++F D+ S ++ F Sbjct: 319 LIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIF 378 Query: 572 DELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 DELD+I +R +V+NQLL +MDG++ Sbjct: 379 DELDAICKKR-GSSGGDTGVGDQVVNQLLAKMDGVD 413
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 83.6 bits (205), Expect = 5e-16 Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 12/168 (7%) Frame = +2 Query: 212 TTSNPSALRETVVEVPNVSWED--IGGLENVKREL-QETVQYPVEHPEKFEKFGMSPSKG 382 +T + ++ R+ ++ P+ ED IGGL+ +++ + + PE EK KG Sbjct: 254 STPHRTSRRKQIIN-PDFKLEDLGIGGLDAEFQDIFRRAFNSRILPPELAEKLDYKHCKG 312 Query: 383 VLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEANVREIFD-------- 535 +L YGPPG GKTL+A+ ++ I GPE+L+ + G SE N+R +F Sbjct: 313 LLLYGPPGTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYKL 372 Query: 536 KARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMN 679 K S V+ FDELDS+ QR V+NQLL++MDG++ Sbjct: 373 KGEDSDLHVIIFDELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGVD 420 Score = 47.0 bits (110), Expect = 5e-05 Identities = 48/190 (25%), Positives = 74/190 (38%), Gaps = 2/190 (1%) Frame = +2 Query: 26 NWNIFQXXTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKT 205 N++ T + GA++ LC A I L ID E + M +T D F Sbjct: 483 NFDELSTLTKNFTGAEIEGLCNSAKSYAISRHTKKGALAQ--IDPESIAKMKITRDDFLL 540 Query: 206 ALTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGV 385 AL P A ++ + I R + E Q ++ E + + + Sbjct: 541 ALNDIRP-AFGTDEEDLSQQAQHGIIQFNQTIRNIFEKGQSIIDVVRSSETEHL---RSI 596 Query: 386 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE--ANVREIFDKARGSAPC 559 L YGPPG GKT +A +A FI + E L + GE + +F S Sbjct: 597 LLYGPPGVGKTSIATTLALNSDFPFIKMLSAETL-VGMGELRKIQEIDNVFRDVHKSPLN 655 Query: 560 VLFFDELDSI 589 VL D++++I Sbjct: 656 VLVIDKIENI 665
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 82.8 bits (203), Expect = 9e-16 Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 14/183 (7%) Frame = +2 Query: 170 NSMAVTNDHFKTALTTSNPSALRETVVEVPNVSWE----DIGGLENVKREL-QETVQYPV 334 NS+ V + + L S + + N W+ IGGL+ + + V Sbjct: 257 NSVIVFDKEEGSMLNLIGKSKGKSAYRSIINPDWDFQQMGIGGLDTEFSHIFRRAFASRV 316 Query: 335 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESE 511 PE E+ GM +G+L +GPPG GKTL+A+ I A I GP++L + GESE Sbjct: 317 FPPEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESE 376 Query: 512 ANVREIFDKAR--------GSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEM 667 +NVR++F A S ++ FDE+D+I QR V+NQLL++M Sbjct: 377 SNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDT-VVNQLLSKM 435 Query: 668 DGM 676 DG+ Sbjct: 436 DGV 438 Score = 30.0 bits (66), Expect = 6.9 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Frame = +2 Query: 332 VEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 511 V++PE S + V+ G GKT LA +A F+ + PE T+ F ES Sbjct: 605 VKNPEN------SGFRTVVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPE-DTVGFSESA 657 Query: 512 --ANVREIFDKARGSAPCVLFFDELDSI 589 +++ F+ A+ S VL D L+ + Sbjct: 658 KCMALKKAFEDAKRSKLSVLLIDNLERL 685
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 81.3 bits (199), Expect = 3e-15 Identities = 42/113 (37%), Positives = 72/113 (63%) Frame = +2 Query: 263 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 442 +++ DIGG+E++K+EL TV + + K + + S G LF GPPG GKTL+AKA++ Sbjct: 346 ITFRDIGGMESLKQELA-TVAFLL----KQKNYSNSYPMGYLFAGPPGTGKTLMAKAMSY 400 Query: 443 ECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR 601 E + ++ ++G + G + A V ++F + + +PC+L+ DE+DSIA +R Sbjct: 401 EAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERR 453
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 79.3 bits (194), Expect = 1e-14 Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 14/167 (8%) Frame = +2 Query: 218 SNPSALRETVVEVPNVSWE----DIGGLENVKREL-QETVQYPVEHPEKFEKFGMSPSKG 382 S +R++++ N W+ IGGL+ + + V PE E+ G+ KG Sbjct: 204 SKGKIVRQSII---NPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKG 260 Query: 383 VLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEANVREIFDKAR----- 544 +L YGPPG GKTL+A+ I A I GP++L + GESEAN+R +F +A Sbjct: 261 ILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKR 320 Query: 545 ---GSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGM 676 S ++ FDE+D+I R V+NQLL ++DG+ Sbjct: 321 LGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDT-VVNQLLAKIDGV 366 Score = 38.1 bits (87), Expect = 0.025 Identities = 46/182 (25%), Positives = 72/182 (39%), Gaps = 4/182 (2%) Frame = +2 Query: 32 NIFQXXTHGYVGADLAALCTEAALQCIREKMDIIDLEDET-IDAEILNSMAVTNDHFKTA 208 N T + GA+L L A + +I + + +D E + + VT F A Sbjct: 432 NEIAAKTKNFSGAELEGLVRAAQSTAMNR---LIKADSKVHVDPEAMEKLRVTRADFLHA 488 Query: 209 LTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVL 388 L A + N+ I EL E V+ + E G+ VL Sbjct: 489 LDNDIKPAFGAAQEMLENLLARGIINWGPPVTELLEDGMLSVQQAKATESSGLV---SVL 545 Query: 389 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE--ANVREIFDKA-RGSAPC 559 G P GK+ LA +A F+ + PE + + F ES ++R+IFD A R + C Sbjct: 546 IEGAPNSGKSALAANLAQLSDFPFVKVCSPEDM-VGFTESAKCLHIRKIFDDAYRSTLSC 604 Query: 560 VL 565 ++ Sbjct: 605 IV 606
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 77.0 bits (188), Expect = 5e-14 Identities = 43/114 (37%), Positives = 61/114 (53%) Frame = +2 Query: 344 EKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR 523 ++ + G+ +LF GPPGCGKTL A+ A E +K L++ + GE+ N+R Sbjct: 108 DEIRQHGLKVRSKMLFCGPPGCGKTLCAEIFAAELGLPLFRVKLDRLISSYLGETATNIR 167 Query: 524 EIFDKARGSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDGMNAK 685 + F+ AR PCVLFFDE D++A R RV+N LL +D M K Sbjct: 168 KTFEFAR-KQPCVLFFDEFDALA--RTRDDSGEHNELRRVVNSLLLFIDNMQPK 218
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 72.4 bits (176), Expect = 1e-12 Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 9/123 (7%) Frame = +2 Query: 341 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEAN 517 P + G+ KG+L +GPPG GKTL+A+ I I GPE+L+ + GE+E N Sbjct: 239 PHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKN 298 Query: 518 VREIFDKAR--------GSAPCVLFFDELDSIATQRXXXXXXXXXXXXRVLNQLLTEMDG 673 VR++F A S V+ FDE+D+I R ++NQLLT++DG Sbjct: 299 VRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDS-IVNQLLTKIDG 357 Query: 674 MNA 682 + A Sbjct: 358 VEA 360 Score = 35.8 bits (81), Expect = 0.12 Identities = 41/196 (20%), Positives = 76/196 (38%), Gaps = 4/196 (2%) Frame = +2 Query: 14 GTRGNWNIFQXXTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTND 193 GT N T Y GA+L + A + ++ + DL + I +T + Sbjct: 418 GTDINLQELAARTKNYSGAELEGVVKSATSYALNRQLSMDDLTKPVEEENI----KITME 473 Query: 194 HFKTALTTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 373 F A+ P+ T ++ + G+ + + + E+ + SP Sbjct: 474 DFLHAIYEVQPAFGAST----DDLERCRLNGMVDCGHRHNHIYKRAMLLVEQVKVSTRSP 529 Query: 374 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE----ANVREIFDKA 541 L GP G GKT LA I + ++ I E + G SE A++ ++F+ A Sbjct: 530 LVTCLLEGPSGSGKTALAATIGIDSDFPYVKIVSAETM---IGLSESTKCAHIVKVFEDA 586 Query: 542 RGSAPCVLFFDELDSI 589 S ++ D+++ + Sbjct: 587 YKSPMSIIILDDIERL 602
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 71.2 bits (173), Expect = 3e-12 Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 1/110 (0%) Frame = +2 Query: 275 DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA 454 DI G++ V EL E V + F P G+L GPPG GKTLL +A+A E Q Sbjct: 975 DIVGIQKVLLELYEIVLFLRNSGRNFTHSETLPH-GILLTGPPGTGKTLLVQALAGEAQV 1033 Query: 455 NFISIKGPELLTMWFGESEA-NVREIFDKARGSAPCVLFFDELDSIATQR 601 I + G L+ GES A ++ +F +AR APC++F DE+D+++++R Sbjct: 1034 PVIVLSGSSLMEP--GESAAFKLQLVFQEARQLAPCIVFIDEIDTLSSKR 1081
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 66.6 bits (161), Expect = 7e-11 Identities = 40/113 (35%), Positives = 58/113 (51%) Frame = +2 Query: 257 PNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 436 P DIGGL +K L+ ++ E++G+ KG+L G G GK+L AK+I Sbjct: 239 PVTKISDIGGLNELKSWLKFRA---ASFSKRAEEYGLPIPKGLLLVGIQGTGKSLTAKSI 295 Query: 437 ANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 ANE + + L GESEA VR++ A +PC+L+ DE+D T Sbjct: 296 ANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETISPCILWIDEIDKAFT 348
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 65.9 bits (159), Expect = 1e-10 Identities = 39/104 (37%), Positives = 60/104 (57%) Frame = +2 Query: 272 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 451 EDIGGL+ +K L++ + ++ +G+ KG+L G G GK+L AKAIAN+ Sbjct: 228 EDIGGLDALKSWLKKRSR---SFSKQSFNYGIPTPKGLLLVGIQGTGKSLTAKAIANDWT 284 Query: 452 ANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELD 583 + + +L GESE+ +RE+ A G +PCVL+ DE+D Sbjct: 285 LPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVLWIDEID 328
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 65.1 bits (157), Expect = 2e-10 Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 2/172 (1%) Frame = +2 Query: 74 LAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVVE 253 L C +L+ IR + I +TID NS+++ K ++ + ++E Sbjct: 170 LTRACQGLSLERIRRVLSKIIATHKTIDE---NSISILLSEKKQIISQTE-------ILE 219 Query: 254 VPNVSWE--DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 427 +V+ + +IGG++N+K L++ + +G+ +G+L G G GK+L A Sbjct: 220 YWSVNEKMGNIGGVDNLKDWLKKR---KTSFTIQASNYGLPTPRGLLLIGIQGTGKSLTA 276 Query: 428 KAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELD 583 KAIA E Q + + L GESE+ +R++ D A +PC+L+ DE+D Sbjct: 277 KAIATEWQLPLLKLDVGRLFGGIVGESESRLRQMIDVAETLSPCILWIDEMD 328
>PCH2_YEAST (P38126) Pachytene checkpoint protein 2| Length = 536 Score = 57.4 bits (137), Expect = 4e-08 Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 42/227 (18%) Frame = +2 Query: 116 EKMDIIDLEDETIDAEILNSMAVTNDHF-----KTALTTSNPSALRETVVEVPNVSWEDI 280 +K+D+ ED+ + E LN+ + +F K L N S L T E WE + Sbjct: 210 DKIDLELDEDDGFEGETLNNCINSVGNFDIPLSKQTLNLVNISYLPGTTFEG---QWESL 266 Query: 281 GGLENVKRELQETVQYPVEHPEKFEKFG----------MSPSKGVLFYGPPGCGKTLLAK 430 N+K L ++ +F++ G ++ +K +L +GPPG GKT L K Sbjct: 267 YFGNNIKERLYSYATISLKIA-RFKQTGDSNQEDITTLITNNKLLLVHGPPGTGKTTLCK 325 Query: 431 AIANECQAN-----------------FISIKGPELLTMWFGESEANVREIF--------- 532 A+ + I + + + WFGES N+ +F Sbjct: 326 ALCQKLSVRREFSDGSDTIDTNYKGIIIELSCARIFSKWFGESSKNISIVFKDIEELLKV 385 Query: 533 DKARGSAPCVLFFDELDSIATQRX-XXXXXXXXXXXRVLNQLLTEMD 670 ++ RG C+L DE+++IA+ R RV+N LLT++D Sbjct: 386 NEGRGIFICLL-IDEVEAIASSRTNLSSRNESTDGIRVVNTLLTQLD 431
>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2| Length = 424 Score = 49.3 bits (116), Expect = 1e-05 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 16/150 (10%) Frame = +2 Query: 269 WEDIGGLENVKRELQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIANE 445 WE++ N+K E+ V EK + + ++ +L GPPG GKT L K +A Sbjct: 136 WENLIYDSNLKNEVMSYVAALARLSEKHVNTKIINVNRLILLTGPPGTGKTSLCKGLAQH 195 Query: 446 ---------CQANFISIKGPELLTMWFGESEANVREIFDKARGSA---PCVLF--FDELD 583 ++ + I L + WF ES V+++FD+ A C++F DE++ Sbjct: 196 LSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFDQIDELAEDEKCMVFVLIDEVE 255 Query: 584 SIATQRXXXXXXXX-XXXXRVLNQLLTEMD 670 S+ R R +N LLT++D Sbjct: 256 SLGMCRESSSSRSEPSDAIRAVNALLTQID 285
>RUVB_RICCN (Q92I87) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 342 Score = 48.9 bits (115), Expect = 1e-05 Identities = 30/70 (42%), Positives = 38/70 (54%) Frame = +2 Query: 386 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVL 565 LFYGPPG GKT LAK I+NE NF S GP +L + A++ I + VL Sbjct: 54 LFYGPPGLGKTTLAKIISNEIGGNFKSTSGPAILKV------ADLAAILTNLEKND--VL 105 Query: 566 FFDELDSIAT 595 F DE+ + T Sbjct: 106 FIDEIHRLNT 115
>RUVB_RICFE (Q4ULW6) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 342 Score = 48.5 bits (114), Expect = 2e-05 Identities = 30/70 (42%), Positives = 37/70 (52%) Frame = +2 Query: 386 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVL 565 LFYGPPG GKT LAK I+NE NF S GP +L A++ I + VL Sbjct: 54 LFYGPPGLGKTTLAKIISNEIGGNFKSTSGPAIL------KAADLAAILTNLEKND--VL 105 Query: 566 FFDELDSIAT 595 F DE+ + T Sbjct: 106 FIDEIHRLNT 115
>TRP13_RAT (Q5XHZ9) Thyroid receptor-interacting protein 13 (Thyroid hormone| receptor interactor 13) (Trip-13) Length = 432 Score = 48.5 bits (114), Expect = 2e-05 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 15/111 (13%) Frame = +2 Query: 383 VLFYGPPGCGKTLLAKAIANEC---------QANFISIKGPELLTMWFGESEANVREIFD 535 VL +GPPG GKT L KA+A + I I L + WF ES V ++F Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQ 234 Query: 536 KARG-----SAPCVLFFDELDSI-ATQRXXXXXXXXXXXXRVLNQLLTEMD 670 K + A + DE++S+ A + RV+N +LT++D Sbjct: 235 KIQDLIDDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQID 285
>TRP13_MOUSE (Q3UA06) Thyroid receptor-interacting protein 13 (Thyroid hormone| receptor interactor 13) (Trip-13) Length = 432 Score = 48.5 bits (114), Expect = 2e-05 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 15/111 (13%) Frame = +2 Query: 383 VLFYGPPGCGKTLLAKAIANEC---------QANFISIKGPELLTMWFGESEANVREIFD 535 VL +GPPG GKT L KA+A + I I L + WF ES V ++F Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQ 234 Query: 536 KARG-----SAPCVLFFDELDSI-ATQRXXXXXXXXXXXXRVLNQLLTEMD 670 K + A + DE++S+ A + RV+N +LT++D Sbjct: 235 KIQDLIDDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQID 285
>TRP13_HUMAN (Q15645) Thyroid receptor-interacting protein 13 (Thyroid hormone| receptor interactor 13) (Trip-13) (Human papillomavirus type 16 E1 protein-binding protein) (HPV16 E1 protein-binding protein) (16E1-BP) Length = 432 Score = 48.5 bits (114), Expect = 2e-05 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 15/111 (13%) Frame = +2 Query: 383 VLFYGPPGCGKTLLAKAIANEC---------QANFISIKGPELLTMWFGESEANVREIFD 535 VL +GPPG GKT L KA+A + I I L + WF ES V ++F Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQ 234 Query: 536 KARG-----SAPCVLFFDELDSI-ATQRXXXXXXXXXXXXRVLNQLLTEMD 670 K + A + DE++S+ A + RV+N +LT++D Sbjct: 235 KIQDLIDDKDALVFVLIDEVESLTAARNACRAGTEPSDAIRVVNAVLTQID 285
>RFCL_SULSO (Q9UXF6) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) (SsoRFC large subunit) Length = 405 Score = 48.1 bits (113), Expect = 2e-05 Identities = 29/108 (26%), Positives = 55/108 (50%) Frame = +2 Query: 266 SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 445 S +D+ ++ K++LQE ++ + G S K VL +GPPG GKT+LA+A+A++ Sbjct: 12 SLKDVENQDDAKKQLQEWIESWLN--------GNSNVKAVLLHGPPGVGKTVLAEALAHD 63 Query: 446 CQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 + + + + +S A ++ G+ ++ DE+D I Sbjct: 64 YNFELLEMNASDSRKLQDIKSIAEKAAVYGSIFGTKGKLILLDEVDGI 111
>RUVB_RICPR (Q9ZDE5) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 342 Score = 47.8 bits (112), Expect = 3e-05 Identities = 29/70 (41%), Positives = 37/70 (52%) Frame = +2 Query: 386 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVL 565 LFYGPPG GKT LAK I+NE NF S GP ++ A++ I + VL Sbjct: 54 LFYGPPGLGKTTLAKIISNEIGGNFKSTAGPAII------KAADLASILTNLEKND--VL 105 Query: 566 FFDELDSIAT 595 F DE+ + T Sbjct: 106 FIDEIHRLNT 115
>RUVB_RICTY (Q68WZ0) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 342 Score = 47.4 bits (111), Expect = 4e-05 Identities = 29/70 (41%), Positives = 37/70 (52%) Frame = +2 Query: 386 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVL 565 LFYGPPG GKT LAK I+NE NF S GP ++ A++ I + VL Sbjct: 54 LFYGPPGLGKTTLAKIISNEIGGNFKSTAGPAII------KAADLAAILTNLEKND--VL 105 Query: 566 FFDELDSIAT 595 F DE+ + T Sbjct: 106 FIDEIHRLNT 115
>RUVB_MYCH2 (Q600N3) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 318 Score = 47.4 bits (111), Expect = 4e-05 Identities = 35/114 (30%), Positives = 59/114 (51%) Frame = +2 Query: 248 VEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 427 +E+ S+E+ G +++L ET+Q + +K ++ +LFYGPPG GKT LA Sbjct: 5 LEIRPSSFENFIG----QKKLVETLQILISSSQKRKQ----SLDHILFYGPPGTGKTTLA 56 Query: 428 KAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 +AN +A ++GP L E +++V + A S ++F DE+ I Sbjct: 57 NIVANVLEAKIKYVQGPLL------EKKSDVLAVL--ANISPDTIIFIDEIHGI 102
>RUVB_STAS1 (Q49Y79) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 334 Score = 47.0 bits (110), Expect = 5e-05 Identities = 31/95 (32%), Positives = 45/95 (47%) Frame = +2 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 490 Q T++ +E K K P VL +GPPG GKT L+ IANE + N I GP + Sbjct: 32 QSTIKSNLEVFIKAAKMRQEPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRIISGPSI-- 89 Query: 491 MWFGESEANVREIFDKARGSAPCVLFFDELDSIAT 595 E ++ I + VLF DE+ +++ Sbjct: 90 ----ERPGDLAAILSSLQPGD--VLFIDEIHRLSS 118
>RUVB_MYCHJ (Q4A9R6) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 312 Score = 47.0 bits (110), Expect = 5e-05 Identities = 31/97 (31%), Positives = 51/97 (52%) Frame = +2 Query: 299 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 478 +++L ET+Q + +K ++ +LFYGPPG GKT LA +AN +A ++GP Sbjct: 12 QKKLVETLQILISSSQKRKQ----SLDHILFYGPPGTGKTTLANIVANVLEAKIKYVQGP 67 Query: 479 ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 L E +++V + A S ++F DE+ I Sbjct: 68 LL------EKKSDVLAVL--ANISPDTIIFIDEIHGI 96
>RUVB_MYCH7 (Q4A7W4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 312 Score = 47.0 bits (110), Expect = 5e-05 Identities = 31/97 (31%), Positives = 51/97 (52%) Frame = +2 Query: 299 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 478 +++L ET+Q + +K ++ +LFYGPPG GKT LA +AN +A ++GP Sbjct: 12 QKKLVETLQILISSSQKRKQ----SLDHILFYGPPGTGKTTLANIVANVLEAKIKYVQGP 67 Query: 479 ELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSI 589 L E +++V + A S ++F DE+ I Sbjct: 68 LL------EKKSDVLAVL--ANISPDTIIFIDEIHGI 96
>RUVB_STAES (Q8CS91) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 334 Score = 46.6 bits (109), Expect = 7e-05 Identities = 24/58 (41%), Positives = 32/58 (55%) Frame = +2 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 484 Q +++ +E K K P VL +GPPG GKT L+ IANE + N +I GP L Sbjct: 32 QSSIKSNLEVFIKAAKLRQEPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRTISGPSL 89
>RUVB_STAEQ (Q5HNR0) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 334 Score = 46.6 bits (109), Expect = 7e-05 Identities = 24/58 (41%), Positives = 32/58 (55%) Frame = +2 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 484 Q +++ +E K K P VL +GPPG GKT L+ IANE + N +I GP L Sbjct: 32 QSSIKSNLEVFIKAAKLRQEPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRTISGPSL 89
>RUVB_THIDN (Q30PX6) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 337 Score = 45.8 bits (107), Expect = 1e-04 Identities = 33/109 (30%), Positives = 47/109 (43%) Frame = +2 Query: 266 SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 445 +W + G E +K+ L ++ + E + VLFYGPPG GKT LA IANE Sbjct: 24 AWNEYIGQEQIKKNLGVFIEASKKRAEALDH--------VLFYGPPGLGKTTLALIIANE 75 Query: 446 CQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA 592 AN P + E ++ I VLF DE+ ++ Sbjct: 76 MNANIKVTAAPMI------EKSGDLAAILTNLEEGD--VLFIDEIHRLS 116
>RUVB_ANAMM (Q5PBM1) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 331 Score = 45.4 bits (106), Expect = 2e-04 Identities = 29/71 (40%), Positives = 34/71 (47%) Frame = +2 Query: 272 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 451 E+ G V + L+ +Q E E P VL YGPPG GKT LA IA E + Sbjct: 27 EEFVGQTEVIKNLKVFIQSAYERRE--------PMDHVLLYGPPGLGKTTLAHIIAKELK 78 Query: 452 ANFISIKGPEL 484 NF S GP L Sbjct: 79 VNFRSTAGPLL 89
>RUVB_STAAW (P66759) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 334 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/58 (39%), Positives = 32/58 (55%) Frame = +2 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 484 Q +++ +E K K P VL +GPPG GKT L+ IANE + N ++ GP L Sbjct: 32 QNSIKSNLEVFIKAAKLRHEPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRTVSGPSL 89
>RUVB_STAAS (Q6G8S8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 334 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/58 (39%), Positives = 32/58 (55%) Frame = +2 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 484 Q +++ +E K K P VL +GPPG GKT L+ IANE + N ++ GP L Sbjct: 32 QNSIKSNLEVFIKAAKLRHEPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRTVSGPSL 89
>RUVB_STAAR (Q6GG63) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 334 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/58 (39%), Positives = 32/58 (55%) Frame = +2 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 484 Q +++ +E K K P VL +GPPG GKT L+ IANE + N ++ GP L Sbjct: 32 QNSIKSNLEVFIKAAKLRHEPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRTVSGPSL 89
>RUVB_STAAN (P66758) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 334 Score = 45.4 bits (106), Expect = 2e-04 Identities = 23/58 (39%), Positives = 32/58 (55%) Frame = +2 Query: 311 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 484 Q +++ +E K K P VL +GPPG GKT L+ IANE + N ++ GP L Sbjct: 32 QNSIKSNLEVFIKAAKLRHEPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRTVSGPSL 89 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,838,574 Number of Sequences: 219361 Number of extensions: 1803504 Number of successful extensions: 9411 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 8439 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9217 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
