ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalj02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_475203.1| Oryza sativa (japonica cultivar-group), predic... 624 e-176
2dbj|AK067298.1| Oryza sativa (japonica cultivar-group) cDNA clon... 624 e-176
3gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome... 204 3e-49
4gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome... 204 3e-49
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 204 3e-49
6ref|NM_128710.2| Arabidopsis thaliana EMB2289; protein transloca... 94 7e-16
7emb|BX820289.1|CNS0A8QZ Arabidopsis thaliana Full-length cDNA Co... 88 4e-14
8gb|AY062590.1| Arabidopsis thaliana putative preprotein transloc... 66 2e-07
9gb|AC007071.7| Arabidopsis thaliana chromosome 2 clone T9H9 map ... 64 6e-07
10ref|XM_368718.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 44 0.57
11gb|AC083799.17| Homo sapiens 3 BAC RP11-332M2 (Roswell Park Canc... 44 0.57
12gb|AC113204.7| Mus musculus chromosome 12, clone RP23-312J1, com... 42 2.3
13gb|AC084780.10| Mus musculus chromosome 5, clone RP23-212N20, co... 40 8.9
14gb|AC122915.2| Mus musculus BAC clone RP23-27G7 from 5, complete... 40 8.9
15gb|AC110980.6| Rattus norvegicus 4 BAC CH230-94D15 (Children's H... 40 8.9
16emb|AL139041.17| Human DNA sequence from clone RP11-408O19 on ch... 40 8.9
17emb|AL008728.1|HS125N5 Human DNA sequence from clone RP1-125N5 o... 40 8.9
18gb|AC159882.2| Mus musculus BAC clone RP24-480A4 from chromosome... 40 8.9
19emb|AL663083.5| Mouse DNA sequence from clone RP23-280G3 on chro... 40 8.9
20gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
21gb|AC011118.13| Homo sapiens chromosome 8, clone RP11-163D8, com... 40 8.9
22gb|AC104358.4| Homo sapiens chromosome 8, clone RP11-151L10, com... 40 8.9
23dbj|AK147615.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 40 8.9
24dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
25dbj|AP002089.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.9
26dbj|AP005622.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.9
27gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
28gb|AC134918.5| Mus musculus BAC clone RP23-71G16 from 3, complet... 40 8.9
29gb|AC122217.4| Mus musculus BAC clone RP23-118J3 from 16, comple... 40 8.9
30dbj|AP003786.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.9

>ref|XM_475203.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1341

 Score =  624 bits (315), Expect = e-176
 Identities = 549/628 (87%)
 Strand = Plus / Plus

                                                                       
Query: 10  cctggcgcggcttggggccgtggcggnnggcgcggcggnggccttcttccgcagcgaaat 69
           |||||||||||| |||||||||||||   ||||||||| |||  ||||||||||||| ||
Sbjct: 294 cctggcgcggctgggggccgtggcggagagcgcggcggaggcgctcttccgcagcgagat 353

                                                                       
Query: 70  acggcggcggcttgccgtcacggccgtgctcatcgtgctcagccgcgtcggctacttcgt 129
            || |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 354 tcgccggcggctggccgtcacggccgtgctcatcctgctcagccgcgtcggctacttcgt 413

                                                                       
Query: 130 gccgcttcctgggttcgaccgccgcctcatccccgactcctatctcagcttcgccccgct 189
            |||||||| ||||||||||| || ||||||||||| ||||| |||||||| || || ||
Sbjct: 414 cccgcttcccgggttcgaccgacggctcatccccgattcctacctcagctttgcacccct 473

                                                                       
Query: 190 ccctgcagatgacctcgttgattttgcttctgaactgaagctatcatttttccagctggg 249
            |||||||||||||||| ||||||| | || ||| ||||||| |||||||||||||| ||
Sbjct: 474 tcctgcagatgacctcggtgatttttcatccgaattgaagctgtcatttttccagctcgg 533

                                                                       
Query: 250 aatcagtcatcagatatcagcatcgattgtgatgcaggttctttgccatgttcttccatc 309
           ||||||||||||||| |||||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 534 aatcagtcatcagatttcagcatctattgtcatgcaggttctctgtcatgttcttccatc 593

                                                                       
Query: 310 acttgaaaagattcgcaaggaaggattagacgggcatgagaagatcaaaagctatatatg 369
           |||||||||  | || |||||||| ||||| || ||||||||||||||| ||||||| ||
Sbjct: 594 acttgaaaaactacgaaaggaagggttagatggacatgagaagatcaaaggctatatttg 653

                                                                       
Query: 370 gtggctatcactgggttttgcaattgtggctgcttgtactgtgtcatgctattcgctgca 429
           |||||| || |||||||||||| ||||||| |||| ||| ||||||||||| || |||||
Sbjct: 654 gtggctgtcgctgggttttgcacttgtggcggcttttacagtgtcatgctactcactgca 713

                                                                       
Query: 430 gtactccatatatgcagcaagttacagggttaagcatgtcatattaacaagctttctgct 489
            || || |||||||| ||||||||||| ||||||||||| ||  |||||||| || | ||
Sbjct: 714 atattctatatatgctgcaagttacagagttaagcatgtaatgataacaagccttttcct 773

                                                                       
Query: 490 tgtcctcggtgcaatgtcaacgacttggatctgtgacaccataacggaatctggctttgg 549
           ||| || ||||||||| ||| ||| |||||||||||||| ||| |||||||||| |||||
Sbjct: 774 tgttcttggtgcaatgacaatgacatggatctgtgacactatatcggaatctggatttgg 833

                                                                       
Query: 550 gcatggctcatctttgattatctgtgttggaatattgactggttacacaaatacactaca 609
            |||||||| || |||||||||||||| ||||||||||||||||| ||| | ||||| ||
Sbjct: 834 acatggctcttccttgattatctgtgtgggaatattgactggttatacagacacactcca 893

                                       
Query: 610 caagatgctaactcaattttcaggaaat 637
           ||||||| ||||||||||||||||||||
Sbjct: 894 caagatgttaactcaattttcaggaaat 921



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>dbj|AK067298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106K06, full
           insert sequence
          Length = 2452

 Score =  624 bits (315), Expect = e-176
 Identities = 549/628 (87%)
 Strand = Plus / Plus

                                                                       
Query: 10  cctggcgcggcttggggccgtggcggnnggcgcggcggnggccttcttccgcagcgaaat 69
           |||||||||||| |||||||||||||   ||||||||| |||  ||||||||||||| ||
Sbjct: 368 cctggcgcggctgggggccgtggcggagagcgcggcggaggcgctcttccgcagcgagat 427

                                                                       
Query: 70  acggcggcggcttgccgtcacggccgtgctcatcgtgctcagccgcgtcggctacttcgt 129
            || |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 428 tcgccggcggctggccgtcacggccgtgctcatcctgctcagccgcgtcggctacttcgt 487

                                                                       
Query: 130 gccgcttcctgggttcgaccgccgcctcatccccgactcctatctcagcttcgccccgct 189
            |||||||| ||||||||||| || ||||||||||| ||||| |||||||| || || ||
Sbjct: 488 cccgcttcccgggttcgaccgacggctcatccccgattcctacctcagctttgcacccct 547

                                                                       
Query: 190 ccctgcagatgacctcgttgattttgcttctgaactgaagctatcatttttccagctggg 249
            |||||||||||||||| ||||||| | || ||| ||||||| |||||||||||||| ||
Sbjct: 548 tcctgcagatgacctcggtgatttttcatccgaattgaagctgtcatttttccagctcgg 607

                                                                       
Query: 250 aatcagtcatcagatatcagcatcgattgtgatgcaggttctttgccatgttcttccatc 309
           ||||||||||||||| |||||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 608 aatcagtcatcagatttcagcatctattgtcatgcaggttctctgtcatgttcttccatc 667

                                                                       
Query: 310 acttgaaaagattcgcaaggaaggattagacgggcatgagaagatcaaaagctatatatg 369
           |||||||||  | || |||||||| ||||| || ||||||||||||||| ||||||| ||
Sbjct: 668 acttgaaaaactacgaaaggaagggttagatggacatgagaagatcaaaggctatatttg 727

                                                                       
Query: 370 gtggctatcactgggttttgcaattgtggctgcttgtactgtgtcatgctattcgctgca 429
           |||||| || |||||||||||| ||||||| |||| ||| ||||||||||| || |||||
Sbjct: 728 gtggctgtcgctgggttttgcacttgtggcggcttttacagtgtcatgctactcactgca 787

                                                                       
Query: 430 gtactccatatatgcagcaagttacagggttaagcatgtcatattaacaagctttctgct 489
            || || |||||||| ||||||||||| ||||||||||| ||  |||||||| || | ||
Sbjct: 788 atattctatatatgctgcaagttacagagttaagcatgtaatgataacaagccttttcct 847

                                                                       
Query: 490 tgtcctcggtgcaatgtcaacgacttggatctgtgacaccataacggaatctggctttgg 549
           ||| || ||||||||| ||| ||| |||||||||||||| ||| |||||||||| |||||
Sbjct: 848 tgttcttggtgcaatgacaatgacatggatctgtgacactatatcggaatctggatttgg 907

                                                                       
Query: 550 gcatggctcatctttgattatctgtgttggaatattgactggttacacaaatacactaca 609
            |||||||| || |||||||||||||| ||||||||||||||||| ||| | ||||| ||
Sbjct: 908 acatggctcttccttgattatctgtgtgggaatattgactggttatacagacacactcca 967

                                       
Query: 610 caagatgctaactcaattttcaggaaat 637
           ||||||| ||||||||||||||||||||
Sbjct: 968 caagatgttaactcaattttcaggaaat 995



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>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
             complete sequence
          Length = 146303

 Score =  204 bits (103), Expect = 3e-49
 Identities = 166/188 (88%)
 Strand = Plus / Minus

                                                                         
Query: 10    cctggcgcggcttggggccgtggcggnnggcgcggcggnggccttcttccgcagcgaaat 69
             |||||||||||| |||||||||||||   ||||||||| |||  ||||||||||||| ||
Sbjct: 12850 cctggcgcggctgggggccgtggcggagagcgcggcggaggcgctcttccgcagcgagat 12791

                                                                         
Query: 70    acggcggcggcttgccgtcacggccgtgctcatcgtgctcagccgcgtcggctacttcgt 129
              || |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 12790 tcgccggcggctggccgtcacggccgtgctcatcctgctcagccgcgtcggctacttcgt 12731

                                                                         
Query: 130   gccgcttcctgggttcgaccgccgcctcatccccgactcctatctcagcttcgccccgct 189
              |||||||| ||||||||||| || ||||||||||| ||||| |||||||| || || ||
Sbjct: 12730 cccgcttcccgggttcgaccgacggctcatccccgattcctacctcagctttgcacccct 12671

                     
Query: 190   ccctgcag 197
              |||||||
Sbjct: 12670 tcctgcag 12663



 Score =  117 bits (59), Expect = 5e-23
 Identities = 89/99 (89%)
 Strand = Plus / Minus

                                                                         
Query: 193   tgcagatgacctcgttgattttgcttctgaactgaagctatcatttttccagctgggaat 252
             |||||||||||||| ||||||| | || ||| ||||||| |||||||||||||| |||||
Sbjct: 12532 tgcagatgacctcggtgatttttcatccgaattgaagctgtcatttttccagctcggaat 12473

                                                    
Query: 253   cagtcatcagatatcagcatcgattgtgatgcaggttct 291
             |||||||||||| |||||||| ||||| |||||||||||
Sbjct: 12472 cagtcatcagatttcagcatctattgtcatgcaggttct 12434



 Score =  101 bits (51), Expect = 3e-18
 Identities = 75/83 (90%)
 Strand = Plus / Minus

                                                                         
Query: 551   catggctcatctttgattatctgtgttggaatattgactggttacacaaatacactacac 610
             |||||||| || |||||||||||||| ||||||||||||||||| ||| | ||||| |||
Sbjct: 11400 catggctcttccttgattatctgtgtgggaatattgactggttatacagacacactccac 11341

                                    
Query: 611   aagatgctaactcaattttcagg 633
             |||||| ||||||||||||||||
Sbjct: 11340 aagatgttaactcaattttcagg 11318



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                         
Query: 285   aggttctttgccatgttcttccatcacttgaaaagattcgcaaggaaggattagacgggc 344
             ||||||| || |||||||||||||||||||||||  | || |||||||| ||||| || |
Sbjct: 12214 aggttctctgtcatgttcttccatcacttgaaaaactacgaaaggaagggttagatggac 12155

                                   
Query: 345   atgagaagatcaaaagctatat 366
             |||||||||||||| |||||||
Sbjct: 12154 atgagaagatcaaaggctatat 12133



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                         
Query: 368   tggtggctatcactgggttttgcaattgtggctgcttgtactgtgtcatgctattcgctg 427
             |||||||| || |||||||||||| ||||||| |||| ||| ||||||||||| || |||
Sbjct: 12019 tggtggctgtcgctgggttttgcacttgtggcggcttttacagtgtcatgctactcactg 11960

                                           
Query: 428   cagtactccatatatgcagcaagttacagg 457
             || || || |||||||| ||||||||||||
Sbjct: 11959 caatattctatatatgctgcaagttacagg 11930



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                         
Query: 458   gttaagcatgtcatattaacaagctttctgcttgtcctcggtgcaatgtcaacgacttgg 517
             ||||||||||| ||  |||||||| || | ||||| || ||||||||| ||| ||| |||
Sbjct: 11817 gttaagcatgtaatgataacaagccttttccttgttcttggtgcaatgacaatgacatgg 11758

                                             
Query: 518   atctgtgacaccataacggaatctggctttgg 549
             ||||||||||| ||| |||||||||| |||||
Sbjct: 11757 atctgtgacactatatcggaatctggatttgg 11726



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>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21,
              complete sequence
          Length = 151267

 Score =  204 bits (103), Expect = 3e-49
 Identities = 166/188 (88%)
 Strand = Plus / Minus

                                                                          
Query: 10     cctggcgcggcttggggccgtggcggnnggcgcggcggnggccttcttccgcagcgaaat 69
              |||||||||||| |||||||||||||   ||||||||| |||  ||||||||||||| ||
Sbjct: 130672 cctggcgcggctgggggccgtggcggagagcgcggcggaggcgctcttccgcagcgagat 130613

                                                                          
Query: 70     acggcggcggcttgccgtcacggccgtgctcatcgtgctcagccgcgtcggctacttcgt 129
               || |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 130612 tcgccggcggctggccgtcacggccgtgctcatcctgctcagccgcgtcggctacttcgt 130553

                                                                          
Query: 130    gccgcttcctgggttcgaccgccgcctcatccccgactcctatctcagcttcgccccgct 189
               |||||||| ||||||||||| || ||||||||||| ||||| |||||||| || || ||
Sbjct: 130552 cccgcttcccgggttcgaccgacggctcatccccgattcctacctcagctttgcacccct 130493

                      
Query: 190    ccctgcag 197
               |||||||
Sbjct: 130492 tcctgcag 130485



 Score =  117 bits (59), Expect = 5e-23
 Identities = 89/99 (89%)
 Strand = Plus / Minus

                                                                          
Query: 193    tgcagatgacctcgttgattttgcttctgaactgaagctatcatttttccagctgggaat 252
              |||||||||||||| ||||||| | || ||| ||||||| |||||||||||||| |||||
Sbjct: 130354 tgcagatgacctcggtgatttttcatccgaattgaagctgtcatttttccagctcggaat 130295

                                                     
Query: 253    cagtcatcagatatcagcatcgattgtgatgcaggttct 291
              |||||||||||| |||||||| ||||| |||||||||||
Sbjct: 130294 cagtcatcagatttcagcatctattgtcatgcaggttct 130256



 Score =  101 bits (51), Expect = 3e-18
 Identities = 75/83 (90%)
 Strand = Plus / Minus

                                                                          
Query: 551    catggctcatctttgattatctgtgttggaatattgactggttacacaaatacactacac 610
              |||||||| || |||||||||||||| ||||||||||||||||| ||| | ||||| |||
Sbjct: 129222 catggctcttccttgattatctgtgtgggaatattgactggttatacagacacactccac 129163

                                     
Query: 611    aagatgctaactcaattttcagg 633
              |||||| ||||||||||||||||
Sbjct: 129162 aagatgttaactcaattttcagg 129140



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                          
Query: 285    aggttctttgccatgttcttccatcacttgaaaagattcgcaaggaaggattagacgggc 344
              ||||||| || |||||||||||||||||||||||  | || |||||||| ||||| || |
Sbjct: 130036 aggttctctgtcatgttcttccatcacttgaaaaactacgaaaggaagggttagatggac 129977

                                    
Query: 345    atgagaagatcaaaagctatat 366
              |||||||||||||| |||||||
Sbjct: 129976 atgagaagatcaaaggctatat 129955



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                          
Query: 368    tggtggctatcactgggttttgcaattgtggctgcttgtactgtgtcatgctattcgctg 427
              |||||||| || |||||||||||| ||||||| |||| ||| ||||||||||| || |||
Sbjct: 129841 tggtggctgtcgctgggttttgcacttgtggcggcttttacagtgtcatgctactcactg 129782

                                            
Query: 428    cagtactccatatatgcagcaagttacagg 457
              || || || |||||||| ||||||||||||
Sbjct: 129781 caatattctatatatgctgcaagttacagg 129752



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                          
Query: 458    gttaagcatgtcatattaacaagctttctgcttgtcctcggtgcaatgtcaacgacttgg 517
              ||||||||||| ||  |||||||| || | ||||| || ||||||||| ||| ||| |||
Sbjct: 129639 gttaagcatgtaatgataacaagccttttccttgttcttggtgcaatgacaatgacatgg 129580

                                              
Query: 518    atctgtgacaccataacggaatctggctttgg 549
              ||||||||||| ||| |||||||||| |||||
Sbjct: 129579 atctgtgacactatatcggaatctggatttgg 129548



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  204 bits (103), Expect = 3e-49
 Identities = 166/188 (88%)
 Strand = Plus / Minus

                                                                            
Query: 10       cctggcgcggcttggggccgtggcggnnggcgcggcggnggccttcttccgcagcgaaat 69
                |||||||||||| |||||||||||||   ||||||||| |||  ||||||||||||| ||
Sbjct: 19208774 cctggcgcggctgggggccgtggcggagagcgcggcggaggcgctcttccgcagcgagat 19208715

                                                                            
Query: 70       acggcggcggcttgccgtcacggccgtgctcatcgtgctcagccgcgtcggctacttcgt 129
                 || |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 19208714 tcgccggcggctggccgtcacggccgtgctcatcctgctcagccgcgtcggctacttcgt 19208655

                                                                            
Query: 130      gccgcttcctgggttcgaccgccgcctcatccccgactcctatctcagcttcgccccgct 189
                 |||||||| ||||||||||| || ||||||||||| ||||| |||||||| || || ||
Sbjct: 19208654 cccgcttcccgggttcgaccgacggctcatccccgattcctacctcagctttgcacccct 19208595

                        
Query: 190      ccctgcag 197
                 |||||||
Sbjct: 19208594 tcctgcag 19208587



 Score =  117 bits (59), Expect = 5e-23
 Identities = 89/99 (89%)
 Strand = Plus / Minus

                                                                            
Query: 193      tgcagatgacctcgttgattttgcttctgaactgaagctatcatttttccagctgggaat 252
                |||||||||||||| ||||||| | || ||| ||||||| |||||||||||||| |||||
Sbjct: 19208456 tgcagatgacctcggtgatttttcatccgaattgaagctgtcatttttccagctcggaat 19208397

                                                       
Query: 253      cagtcatcagatatcagcatcgattgtgatgcaggttct 291
                |||||||||||| |||||||| ||||| |||||||||||
Sbjct: 19208396 cagtcatcagatttcagcatctattgtcatgcaggttct 19208358



 Score =  101 bits (51), Expect = 3e-18
 Identities = 75/83 (90%)
 Strand = Plus / Minus

                                                                            
Query: 551      catggctcatctttgattatctgtgttggaatattgactggttacacaaatacactacac 610
                |||||||| || |||||||||||||| ||||||||||||||||| ||| | ||||| |||
Sbjct: 19207324 catggctcttccttgattatctgtgtgggaatattgactggttatacagacacactccac 19207265

                                       
Query: 611      aagatgctaactcaattttcagg 633
                |||||| ||||||||||||||||
Sbjct: 19207264 aagatgttaactcaattttcagg 19207242



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                            
Query: 285      aggttctttgccatgttcttccatcacttgaaaagattcgcaaggaaggattagacgggc 344
                ||||||| || |||||||||||||||||||||||  | || |||||||| ||||| || |
Sbjct: 19208138 aggttctctgtcatgttcttccatcacttgaaaaactacgaaaggaagggttagatggac 19208079

                                      
Query: 345      atgagaagatcaaaagctatat 366
                |||||||||||||| |||||||
Sbjct: 19208078 atgagaagatcaaaggctatat 19208057



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                            
Query: 368      tggtggctatcactgggttttgcaattgtggctgcttgtactgtgtcatgctattcgctg 427
                |||||||| || |||||||||||| ||||||| |||| ||| ||||||||||| || |||
Sbjct: 19207943 tggtggctgtcgctgggttttgcacttgtggcggcttttacagtgtcatgctactcactg 19207884

                                              
Query: 428      cagtactccatatatgcagcaagttacagg 457
                || || || |||||||| ||||||||||||
Sbjct: 19207883 caatattctatatatgctgcaagttacagg 19207854



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                            
Query: 458      gttaagcatgtcatattaacaagctttctgcttgtcctcggtgcaatgtcaacgacttgg 517
                ||||||||||| ||  |||||||| || | ||||| || ||||||||| ||| ||| |||
Sbjct: 19207741 gttaagcatgtaatgataacaagccttttccttgttcttggtgcaatgacaatgacatgg 19207682

                                                
Query: 518      atctgtgacaccataacggaatctggctttgg 549
                ||||||||||| ||| |||||||||| |||||
Sbjct: 19207681 atctgtgacactatatcggaatctggatttgg 19207650



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>ref|NM_128710.2| Arabidopsis thaliana EMB2289; protein translocase AT2G31530
           (EMB2289) mRNA, complete cds
          Length = 1827

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 116/139 (83%)
 Strand = Plus / Plus

                                                                       
Query: 497 ggtgcaatgtcaacgacttggatctgtgacaccataacggaatctggctttgggcatggc 556
           ||||||||| ||| ||| ||| ||||||| || ||| | |||||||| ||||| ||||||
Sbjct: 826 ggtgcaatgacaatgacgtggctctgtgatacaatatcagaatctggatttggtcatggc 885

                                                                       
Query: 557 tcatctttgattatctgtgttggaatattgactggttacacaaatacactacacaagatg 616
           |||||| ||||||| ||||| ||||||||||| || |||||| | ||  |||||||||||
Sbjct: 886 tcatctctgattatttgtgtgggaatattgacgggctacacagagactttacacaagatg 945

                              
Query: 617 ctaactcaattttcaggaa 635
           || | |||| | |||||||
Sbjct: 946 ctcaatcaaatctcaggaa 964



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>emb|BX820289.1|CNS0A8QZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH19ZD10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1800

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 113/136 (83%)
 Strand = Plus / Plus

                                                                       
Query: 500 gcaatgtcaacgacttggatctgtgacaccataacggaatctggctttgggcatggctca 559
           |||||| ||| ||| ||| ||||||| || ||| | |||||||| ||||| |||||||||
Sbjct: 839 gcaatgacaatgacgtggctctgtgatacaatatcagaatctggatttggtcatggctca 898

                                                                       
Query: 560 tctttgattatctgtgttggaatattgactggttacacaaatacactacacaagatgcta 619
           ||| ||||||| ||||| ||||||||||| || |||||| | ||  ||||||||||||| 
Sbjct: 899 tctctgattatttgtgtgggaatattgacgggctacacagagactttacacaagatgctc 958

                           
Query: 620 actcaattttcaggaa 635
           | |||| | |||||||
Sbjct: 959 aatcaaatctcaggaa 974



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 326 aaggaaggattagacgggcatgagaagatcaaaagctatatatggtggctatc 378
           |||||||| ||||| || || ||||||||||| || |||||||||||||||||
Sbjct: 665 aaggaaggcttagatggtcacgagaagatcaagagttatatatggtggctatc 717



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>gb|AY062590.1| Arabidopsis thaliana putative preprotein translocase SECY protein
            (At2g31530; T9H9.5) mRNA, complete cds
          Length = 2065

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                        
Query: 551  catggctcatctttgattatctgtgttggaatattgactggttacacaaatacactacac 610
            |||||||||||| ||||||| ||||| ||||||||||| || |||||| | ||  |||||
Sbjct: 1124 catggctcatctctgattatttgtgtgggaatattgacgggctacacagagactttacac 1183

                                     
Query: 611  aagatgctaactcaattttcaggaa 635
            |||||||| | |||| | |||||||
Sbjct: 1184 aagatgctcaatcaaatctcaggaa 1208



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>gb|AC007071.7| Arabidopsis thaliana chromosome 2 clone T9H9 map nga361, complete
             sequence
          Length = 79734

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                         
Query: 551   catggctcatctttgattatctgtgttggaatattgactggttacacaaatacactacac 610
             |||||||||||| ||||||| ||||| ||||||||||| || |||||| | ||  |||||
Sbjct: 17568 catggctcatctctgattatttgtgtgggaatattgacgggctacacagagactttacac 17627

                     
Query: 611   aagatgct 618
             ||||||||
Sbjct: 17628 aagatgct 17635



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>ref|XM_368718.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00526.4) partial mRNA
          Length = 495

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 481 ctttctgcttgtcctcggtgca 502
           ||||||||||||||||||||||
Sbjct: 309 ctttctgcttgtcctcggtgca 330



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>gb|AC083799.17| Homo sapiens 3 BAC RP11-332M2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 184129

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 252   tcagtcatcagatatcagcatc 273
             ||||||||||||||||||||||
Sbjct: 16416 tcagtcatcagatatcagcatc 16395



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>gb|AC113204.7| Mus musculus chromosome 12, clone RP23-312J1, complete sequence
          Length = 207293

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 363    atatatggtggctatcactgg 383
              |||||||||||||||||||||
Sbjct: 176897 atatatggtggctatcactgg 176877



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>gb|AC084780.10| Mus musculus chromosome 5, clone RP23-212N20, complete sequence
          Length = 234357

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 566    attatctgtgttggaatatt 585
              ||||||||||||||||||||
Sbjct: 166789 attatctgtgttggaatatt 166770



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>gb|AC122915.2| Mus musculus BAC clone RP23-27G7 from 5, complete sequence
          Length = 220145

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 566    attatctgtgttggaatatt 585
              ||||||||||||||||||||
Sbjct: 214890 attatctgtgttggaatatt 214871



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>gb|AC110980.6| Rattus norvegicus 4 BAC CH230-94D15 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 87812

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 544  ctttgggcatggctcatctt 563
            ||||||||||||||||||||
Sbjct: 2073 ctttgggcatggctcatctt 2054



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>emb|AL139041.17| Human DNA sequence from clone RP11-408O19 on chromosome 9p11.2-21
              Contains the 3' end of the gene for a novel protein similar
              to sorting nexin 7 (SNX7), the TSCOT gene for thymic
              stromal co-transporter, a pseudogene similar to Mus
              musculus major urinary proteins and a CpG island, complete
              sequence
          Length = 141659

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    ttgtactgtgtcatgctatt 422
              ||||||||||||||||||||
Sbjct: 127570 ttgtactgtgtcatgctatt 127589



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>emb|AL008728.1|HS125N5 Human DNA sequence from clone RP1-125N5 on chromosome 6q26-27 Contains
             the 3' end of a variant of the gene for smooth muscle cell
             associated protein 2 (SMAP2) or secreted modular calcium
             binding protein 2 (SMOC2), a novel gene and a CpG island,
             complete sequence
          Length = 84126

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 586   gactggttacacaaatacactaca 609
             ||||||||||| ||||||||||||
Sbjct: 77995 gactggttacagaaatacactaca 77972



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>gb|AC159882.2| Mus musculus BAC clone RP24-480A4 from chromosome 9, complete sequence
          Length = 178827

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 438    tatatgcagcaagttacagg 457
              ||||||||||||||||||||
Sbjct: 117258 tatatgcagcaagttacagg 117277



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>emb|AL663083.5| Mouse DNA sequence from clone RP23-280G3 on chromosome 11 Contains
            the 3' end of the gene for a novel protein and the 3' end
            of a novel gene, complete sequence
          Length = 191191

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 276  ttgtgatgcaggttctttgc 295
            ||||||||||||||||||||
Sbjct: 2384 ttgtgatgcaggttctttgc 2403



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>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0078C13, complete sequence
          Length = 146538

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 589   tggttacacaaatacactac 608
             ||||||||||||||||||||
Sbjct: 70399 tggttacacaaatacactac 70380



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>gb|AC011118.13| Homo sapiens chromosome 8, clone RP11-163D8, complete sequence
          Length = 135968

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   attttgcttctgaactgaagctat 233
             |||||||||||||| |||||||||
Sbjct: 15479 attttgcttctgaaatgaagctat 15502



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>gb|AC104358.4| Homo sapiens chromosome 8, clone RP11-151L10, complete sequence
          Length = 174055

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    gcaggttctttgccatgttc 302
              ||||||||||||||||||||
Sbjct: 157670 gcaggttctttgccatgttc 157651



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>dbj|AK147615.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
            full-length enriched library, clone:M5C1091A08
            product:unclassifiable, full insert sequence
          Length = 6842

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  ttctttgccatgttcttcca 307
            ||||||||||||||||||||
Sbjct: 5392 ttctttgccatgttcttcca 5373



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 589      tggttacacaaatacactac 608
                ||||||||||||||||||||
Sbjct: 10053640 tggttacacaaatacactac 10053621



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>dbj|AP002089.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1100B9
          Length = 151959

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   gcaggttctttgccatgttc 302
             ||||||||||||||||||||
Sbjct: 72179 gcaggttctttgccatgttc 72160



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>dbj|AP005622.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1016F12, complete
              sequence
          Length = 200738

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    gcaggttctttgccatgttc 302
              ||||||||||||||||||||
Sbjct: 146808 gcaggttctttgccatgttc 146789



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 589      tggttacacaaatacactac 608
                ||||||||||||||||||||
Sbjct: 10059679 tggttacacaaatacactac 10059660



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>gb|AC134918.5| Mus musculus BAC clone RP23-71G16 from 3, complete sequence
          Length = 191764

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   ttctttgccatgttcttcca 307
             ||||||||||||||||||||
Sbjct: 75384 ttctttgccatgttcttcca 75403



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>gb|AC122217.4| Mus musculus BAC clone RP23-118J3 from 16, complete sequence
          Length = 222795

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   tgttggaatattgactggtt 593
             ||||||||||||||||||||
Sbjct: 92615 tgttggaatattgactggtt 92634



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>dbj|AP003786.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1018C4, complete
            sequence
          Length = 174667

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  gcaggttctttgccatgttc 302
            ||||||||||||||||||||
Sbjct: 2336 gcaggttctttgccatgttc 2317


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,247,549
Number of Sequences: 3902068
Number of extensions: 5247549
Number of successful extensions: 98817
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98650
Number of HSP's gapped (non-prelim): 167
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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