Clone Name | baali22 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 141 bits (71), Expect = 3e-30 Identities = 155/183 (84%) Strand = Plus / Plus Query: 228 ggtggggggtgcggggttggccttgggttaggatggggctttggaaatgcttatggttgt 287 |||||||| || || ||||| |||||| |||| |||||||| || || || ||||||||| Sbjct: 19535332 ggtgggggatgtggagttggtcttgggctagggtggggcttcggcaaagcgtatggttgt 19535391 Query: 288 caatatcgatcttcaagggtccagtttcagggcattgagtttcagaaaaagtctgaaggg 347 || ||||| || || || ||||||||||||||||||||||||||||| ||| | ||||| Sbjct: 19535392 cagtatcgctcgtctagagtccagtttcagggcattgagtttcagaagaagaccgaagga 19535451 Query: 348 gatgaagcaccaaagcttgtttcgtcagggcttgttgaaaagtctcgtccttatggctag 407 ||||||||| ||| |||||||| ||| || ||||||||| |||||||||||||| ||| Sbjct: 19535452 gatgaagcatcaagccttgtttctccagagcgtgttgaaaaatctcgtccttatggatag 19535511 Query: 408 tat 410 ||| Sbjct: 19535512 tat 19535514 Score = 46.1 bits (23), Expect = 0.13 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 152 ttcggcgtcggctgcggnttcggnagtcggatgggggttcggagg 196 |||||| |||| ||||| ||||| |||||||||||||||||||| Sbjct: 19534180 ttcggcatcgggtgcgggttcggc-gtcggatgggggttcggagg 19534223 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 194 aggaatgcctctgaacgtattcggcttgggcatcggt 230 ||||||||||||||| | || ||||||||||||||| Sbjct: 19535215 aggaatgcctctgaatatgtttggcttgggcatcggt 19535251 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 18266750 ggggggtgcggggttggcct 18266769 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 8967822 ggggggtgcggggttggcct 8967841
>dbj|AK070613.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063G03, full insert sequence Length = 575 Score = 141 bits (71), Expect = 3e-30 Identities = 155/183 (84%) Strand = Plus / Plus Query: 228 ggtggggggtgcggggttggccttgggttaggatggggctttggaaatgcttatggttgt 287 |||||||| || || ||||| |||||| |||| |||||||| || || || ||||||||| Sbjct: 238 ggtgggggatgtggagttggtcttgggctagggtggggcttcggcaaagcgtatggttgt 297 Query: 288 caatatcgatcttcaagggtccagtttcagggcattgagtttcagaaaaagtctgaaggg 347 || ||||| || || || ||||||||||||||||||||||||||||| ||| | ||||| Sbjct: 298 cagtatcgctcgtctagagtccagtttcagggcattgagtttcagaagaagaccgaagga 357 Query: 348 gatgaagcaccaaagcttgtttcgtcagggcttgttgaaaagtctcgtccttatggctag 407 ||||||||| ||| |||||||| ||| || ||||||||| |||||||||||||| ||| Sbjct: 358 gatgaagcatcaagccttgtttctccagagcgtgttgaaaaatctcgtccttatggatag 417 Query: 408 tat 410 ||| Sbjct: 418 tat 420 Score = 91.7 bits (46), Expect = 2e-15 Identities = 87/100 (87%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 131 ggccctggcattgggctcggcttcggcgtcggctgcggnttcggnagtcggatgggggtt 190 ||||| || |||||||| || |||||| |||| ||||| ||||| |||||||||||||| Sbjct: 59 ggccccgggattgggctggggttcggcatcgggtgcgggttcggc-gtcggatgggggtt 117 Query: 191 cggaggaatgcctctgaacgtattcggcttgggcatcggt 230 |||||||||||||||||| | || ||||||||||||||| Sbjct: 118 cggaggaatgcctctgaatatgtttggcttgggcatcggt 157
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 141 bits (71), Expect = 3e-30 Identities = 155/183 (84%) Strand = Plus / Plus Query: 228 ggtggggggtgcggggttggccttgggttaggatggggctttggaaatgcttatggttgt 287 |||||||| || || ||||| |||||| |||| |||||||| || || || ||||||||| Sbjct: 19461545 ggtgggggatgtggagttggtcttgggctagggtggggcttcggcaaagcgtatggttgt 19461604 Query: 288 caatatcgatcttcaagggtccagtttcagggcattgagtttcagaaaaagtctgaaggg 347 || ||||| || || || ||||||||||||||||||||||||||||| ||| | ||||| Sbjct: 19461605 cagtatcgctcgtctagagtccagtttcagggcattgagtttcagaagaagaccgaagga 19461664 Query: 348 gatgaagcaccaaagcttgtttcgtcagggcttgttgaaaagtctcgtccttatggctag 407 ||||||||| ||| |||||||| ||| || ||||||||| |||||||||||||| ||| Sbjct: 19461665 gatgaagcatcaagccttgtttctccagagcgtgttgaaaaatctcgtccttatggatag 19461724 Query: 408 tat 410 ||| Sbjct: 19461725 tat 19461727 Score = 46.1 bits (23), Expect = 0.13 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 152 ttcggcgtcggctgcggnttcggnagtcggatgggggttcggagg 196 |||||| |||| ||||| ||||| |||||||||||||||||||| Sbjct: 19460393 ttcggcatcgggtgcgggttcggc-gtcggatgggggttcggagg 19460436 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 194 aggaatgcctctgaacgtattcggcttgggcatcggt 230 ||||||||||||||| | || ||||||||||||||| Sbjct: 19461428 aggaatgcctctgaatatgtttggcttgggcatcggt 19461464 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 18193071 ggggggtgcggggttggcct 18193090 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 8967705 ggggggtgcggggttggcct 8967724
>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144596 Score = 141 bits (71), Expect = 3e-30 Identities = 155/183 (84%) Strand = Plus / Plus Query: 228 ggtggggggtgcggggttggccttgggttaggatggggctttggaaatgcttatggttgt 287 |||||||| || || ||||| |||||| |||| |||||||| || || || ||||||||| Sbjct: 67513 ggtgggggatgtggagttggtcttgggctagggtggggcttcggcaaagcgtatggttgt 67572 Query: 288 caatatcgatcttcaagggtccagtttcagggcattgagtttcagaaaaagtctgaaggg 347 || ||||| || || || ||||||||||||||||||||||||||||| ||| | ||||| Sbjct: 67573 cagtatcgctcgtctagagtccagtttcagggcattgagtttcagaagaagaccgaagga 67632 Query: 348 gatgaagcaccaaagcttgtttcgtcagggcttgttgaaaagtctcgtccttatggctag 407 ||||||||| ||| |||||||| ||| || ||||||||| |||||||||||||| ||| Sbjct: 67633 gatgaagcatcaagccttgtttctccagagcgtgttgaaaaatctcgtccttatggatag 67692 Query: 408 tat 410 ||| Sbjct: 67693 tat 67695 Score = 46.1 bits (23), Expect = 0.13 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 152 ttcggcgtcggctgcggnttcggnagtcggatgggggttcggagg 196 |||||| |||| ||||| ||||| |||||||||||||||||||| Sbjct: 66361 ttcggcatcgggtgcgggttcggc-gtcggatgggggttcggagg 66404 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 194 aggaatgcctctgaacgtattcggcttgggcatcggt 230 ||||||||||||||| | || ||||||||||||||| Sbjct: 67396 aggaatgcctctgaatatgtttggcttgggcatcggt 67432
>dbj|AK058298.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F07, full insert sequence Length = 248 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 342 gaaggggatgaagcaccaaagcttgtttcgtcagggcttgttgaaaagtctcgtccttat 401 ||||| ||||||||| ||| |||||||| ||| || ||||||||| |||||||||||| Sbjct: 13 gaaggagatgaagcatcaagccttgtttctccagagcgtgttgaaaaatctcgtccttat 72 Query: 402 ggctagtat 410 || |||||| Sbjct: 73 ggatagtat 81
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 0.51 Identities = 39/45 (86%) Strand = Plus / Minus Query: 130 tggccctggcattgggctcggcttcggcgtcggctgcggnttcgg 174 |||| |||||||||| ||||||||||| |||||| ||| ||||| Sbjct: 230016 tggcactggcattggcttcggcttcggcttcggcttcggcttcgg 229972
>ref|NM_197766.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0027P10.2), mRNA Length = 1195 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cggcttcggcgtcggctgcgg 168 ||||||||||||||||||||| Sbjct: 131 cggcttcggcgtcggctgcgg 151
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 2.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 147 tcggcttcggcgtcggctgcggnttcgg 174 |||||||||||||||||| ||| ||||| Sbjct: 362888 tcggcttcggcgtcggcttcggcttcgg 362861
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 gtggggggtgcggggttggcc 249 ||||||||||||||||||||| Sbjct: 30281 gtggggggtgcggggttggcc 30261
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cggcttcggcgtcggctgcgg 168 ||||||||||||||||||||| Sbjct: 39364 cggcttcggcgtcggctgcgg 39384
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cggcttcggcgtcggctgcgg 168 ||||||||||||||||||||| Sbjct: 21724681 cggcttcggcgtcggctgcgg 21724701
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 gtggggggtgcggggttggcc 249 ||||||||||||||||||||| Sbjct: 5497072 gtggggggtgcggggttggcc 5497052 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 13219327 ggggggtgcggggttggcct 13219346 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 11824183 ggggggtgcggggttggcct 11824164 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 11022119 ggggggtgcggggttggcct 11022138 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 3535089 ggggggtgcggggttggcct 3535108
>dbj|AK121988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109B11, full insert sequence Length = 1256 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cggcttcggcgtcggctgcgg 168 ||||||||||||||||||||| Sbjct: 143 cggcttcggcgtcggctgcgg 163
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cggcttcggcgtcggctgcgg 168 ||||||||||||||||||||| Sbjct: 21736344 cggcttcggcgtcggctgcgg 21736364
>gb|AC118642.11| Mus musculus chromosome 18, clone RP24-112L21, complete sequence Length = 193995 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ttttcatatagtaacataat 543 |||||||||||||||||||| Sbjct: 24588 ttttcatatagtaacataat 24569
>gb|AC113446.10| Mus musculus chromosome 5, clone RP23-258C6, complete sequence Length = 158563 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 478 tggaaagttgtttgaaagcatttt 501 ||||||||||||||||||| |||| Sbjct: 93946 tggaaagttgtttgaaagcttttt 93969
>gb|AC161248.2| Mus musculus BAC clone RP24-530L5 from chromosome 12, complete sequence Length = 155861 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 538 cataatgtggataatccatggtac 561 |||| ||||||||||||||||||| Sbjct: 85417 catactgtggataatccatggtac 85394
>ref|XM_472687.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 513 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gctcggcttcggcgtcggct 164 |||||||||||||||||||| Sbjct: 435 gctcggcttcggcgtcggct 454
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 164571 ggggggtgcggggttggcct 164590
>gb|AC135956.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005H20, complete sequence Length = 135560 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 86612 ggggggtgcggggttggcct 86593
>gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0059H21 map R3342S, complete sequence Length = 133790 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 79473 ggggggtgcggggttggcct 79492
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 100720 ggggggtgcggggttggcct 100739
>gb|AC119210.11| Mus musculus chromosome 18, clone RP24-190H7, complete sequence Length = 198006 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ttttcatatagtaacataat 543 |||||||||||||||||||| Sbjct: 179138 ttttcatatagtaacataat 179119
>gb|AC132488.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0522C01, complete sequence Length = 136120 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 49409 ggggggtgcggggttggcct 49428
>gb|AC093955.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1240_E09, complete sequence Length = 118742 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 53276 ggggggtgcggggttggcct 53295
>gb|AC135923.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0479C09, complete sequence Length = 156776 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 149823 ggggggtgcggggttggcct 149804
>gb|AC135919.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0014F09, complete sequence Length = 151345 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 45464 ggggggtgcggggttggcct 45445
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 29399358 ggggggtgcggggttggcct 29399377 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 8587489 ggggggtgcggggttggcct 8587508
>gb|AF543197.1| Hordeum vulgare subsp. vulgare phosphate transporter 1 (Pht1-1) gene, complete cds Length = 3202 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggctcggcttcggcgtcggc 163 |||||||||||||||||||| Sbjct: 1807 ggctcggcttcggcgtcggc 1826
>emb|AJ344242.1|TAE344242 Triticum aestivum/Thinopyrum intermedium alien addition line partial mRNA for inorganic phosphate transporter (pt2 gene), clone 2 Length = 1601 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggctcggcttcggcgtcggc 163 |||||||||||||||||||| Sbjct: 419 ggctcggcttcggcgtcggc 438
>gb|AC006320.4| Homo sapiens PAC clone RP5-839O24 from 7, complete sequence Length = 94793 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 tataactgcgatcatacaat 427 |||||||||||||||||||| Sbjct: 34814 tataactgcgatcatacaat 34795
>ref|XM_673377.1| Plasmodium berghei strain ANKA PP1-like protein serine/threonine phosphatase (PB000626.00.0) partial mRNA Length = 2490 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 550 aatccatggtacctttttcgtttt 573 |||||||||||| ||||||||||| Sbjct: 1389 aatccatggtacatttttcgtttt 1366
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08, complete sequence Length = 118049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 102372 ggggggtgcggggttggcct 102391
>emb|BX247885.11| Human DNA sequence from clone RP4-669P10 on chromosome 22q13.31-13.33, complete sequence Length = 133246 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 cagtggccctggcattgggctcgg 150 |||||||||||||||||| ||||| Sbjct: 41017 cagtggccctggcattggtctcgg 40994
>emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on chromosome 9 Contains the 5' end of a novel gene (CGI-67), a novel gene, a novel gene (LOC138240) and a CpG island, complete sequence Length = 195844 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tcagtggccctggcattggg 145 |||||||||||||||||||| Sbjct: 168273 tcagtggccctggcattggg 168292
>emb|AL136090.12| Human DNA sequence from clone RP11-97N19 on chromosome 20 Contains the 5' end of the SLC24A3 gene for solute carrier family 24 (sodium/potassium/calcium exchanger) member 3, a novel gene and a CpG island, complete sequence Length = 185473 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 gttgtttgaaagcattttga 503 |||||||||||||||||||| Sbjct: 130371 gttgtttgaaagcattttga 130390
>emb|AL021878.2|HS257I20 Human DNA sequence from clone RP1-257I20 on chromosome 22q13.1-13.2 Contains the 3' end of a novel gene, CYP2D7AP and CYP2D8P (cytochrome P450) pseudogenes,part of the TCF20 gene for transcription factor 20 (AR1, KIAA0292), the NDUFA6 gene for NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 6, a pseudogene similar to GTP-binding protein genes, ESTs, STSs, GSSs and a ca repeat polymorphism, complete sequence Length = 114846 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 cagtggccctggcattgggctcgg 150 |||||||||||||||||| ||||| Sbjct: 67416 cagtggccctggcattggtctcgg 67393
>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19, complete sequence Length = 188317 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 174153 ggggggtgcggggttggcct 174172
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 39823 ggggggtgcggggttggcct 39842
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 22212 ggggggtgcggggttggcct 22231
>emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027G07, complete sequence Length = 179021 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gctcggcttcggcgtcggct 164 |||||||||||||||||||| Sbjct: 16029 gctcggcttcggcgtcggct 16048
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 78157 ggggggtgcggggttggcct 78176
>emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067G20, complete sequence Length = 145825 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 63384 ggggggtgcggggttggcct 63403
>emb|AL162692.1|SPBP4H10 S.pombe chromosome II P1 clone p4H10 Length = 48038 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 ttcatatagtaacataatgt 545 |||||||||||||||||||| Sbjct: 28307 ttcatatagtaacataatgt 28288
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 221 gggcatcggtggggggtgcggggttggc 248 ||||||||| ||||||||||| |||||| Sbjct: 2532 gggcatcggcggggggtgcggcgttggc 2505
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 221 gggcatcggtggggggtgcggggttggc 248 ||||||||| ||||||||||| |||||| Sbjct: 87157 gggcatcggcggggggtgcggcgttggc 87130
>gb|AF379931.1| Aphanomerus sp. M246 28S ribosomal RNA gene, partial sequence Length = 515 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 gctcggcttcggcgtcggct 164 |||||||||||||||||||| Sbjct: 414 gctcggcttcggcgtcggct 395
>gb|AC016884.10| Homo sapiens chromosome , clone RP11-350M7, complete sequence Length = 209320 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 gaaagcattttgatgttttg 510 |||||||||||||||||||| Sbjct: 95992 gaaagcattttgatgttttg 96011
>gb|AC147774.3| Medicago truncatula chromosome 2 BAC clone mth2-10c8, complete sequence Length = 110758 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 aagttgtttgaaagcatttt 501 |||||||||||||||||||| Sbjct: 40353 aagttgtttgaaagcatttt 40372
>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02, complete sequence Length = 137327 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 68461 ggggggtgcggggttggcct 68480
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 33305896 ggggggtgcggggttggcct 33305915 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 30564115 ggggggtgcggggttggcct 30564134 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 29885460 ggggggtgcggggttggcct 29885479 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gctcggcttcggcgtcggct 164 |||||||||||||||||||| Sbjct: 22573929 gctcggcttcggcgtcggct 22573948 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 19082228 ggggggtgcggggttggcct 19082247 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 16102634 ggggggtgcggggttggcct 16102653 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 12045918 ggggggtgcggggttggcct 12045937
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 27766199 ggggggtgcggggttggcct 27766180
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 20536360 ggggggtgcggggttggcct 20536379 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 15776772 ggggggtgcggggttggcct 15776753
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 27978047 ggggggtgcggggttggcct 27978028
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 15739429 ggggggtgcggggttggcct 15739448
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 29490780 ggggggtgcggggttggcct 29490799 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 8585324 ggggggtgcggggttggcct 8585343
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 31459079 ggggggtgcggggttggcct 31459098 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 471489 ggggggtgcggggttggcct 471470
>gb|AY187020.1| Hordeum vulgare subsp. vulgare phosphate transporter HvPT2 mRNA, complete cds Length = 1799 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggctcggcttcggcgtcggc 163 |||||||||||||||||||| Sbjct: 438 ggctcggcttcggcgtcggc 457
>gb|AY187019.1| Hordeum vulgare subsp. vulgare phosphate transporter HvPT2 gene, partial cds Length = 2785 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggctcggcttcggcgtcggc 163 |||||||||||||||||||| Sbjct: 1665 ggctcggcttcggcgtcggc 1684
>gb|AC145899.4| Pan troglodytes BAC clone RP43-19O5 from chromosome 7, complete sequence Length = 176118 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 tataactgcgatcatacaat 427 |||||||||||||||||||| Sbjct: 65188 tataactgcgatcatacaat 65169
>gb|AY220455.1| Hordeum vulgare putative high-affinity phosphate transporter mRNA, complete cds Length = 1610 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggctcggcttcggcgtcggc 163 |||||||||||||||||||| Sbjct: 425 ggctcggcttcggcgtcggc 444
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 53143 ggggggtgcggggttggcct 53162
>gb|AY188394.1| Hordeum vulgare subsp. vulgare phosphate transporter PT1 (HORvu;Pht1;1) mRNA, complete cds Length = 1833 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggctcggcttcggcgtcggc 163 |||||||||||||||||||| Sbjct: 438 ggctcggcttcggcgtcggc 457
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 141405 ggggggtgcggggttggcct 141386
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 67381 ggggggtgcggggttggcct 67362
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 111690 ggggggtgcggggttggcct 111671
>dbj|AP003520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021H10 Length = 142659 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 75067 ggggggtgcggggttggcct 75086
>dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0404D10 Length = 155069 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 91228 ggggggtgcggggttggcct 91209
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 40321 ggggggtgcggggttggcct 40340
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 10732 ggggggtgcggggttggcct 10751
>dbj|AK108820.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-E11, full insert sequence Length = 1801 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gctcggcttcggcgtcggct 164 |||||||||||||||||||| Sbjct: 599 gctcggcttcggcgtcggct 618
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 27790187 ggggggtgcggggttggcct 27790168
>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 177034 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 104244 ggggggtgcggggttggcct 104225
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 166383 ggggggtgcggggttggcct 166402
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21, complete sequence Length = 151936 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 15749 ggggggtgcggggttggcct 15768
>emb|AL844496.4|CNS08CAT Oryza sativa chromosome 12, . BAC OSJNBb0026N09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135462 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ggggggtgcggggttggcct 250 |||||||||||||||||||| Sbjct: 36591 ggggggtgcggggttggcct 36610
>emb|CT030164.9| Mouse DNA sequence from clone RP23-311P8 on chromosome 12, complete sequence Length = 224188 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 538 cataatgtggataatccatggtac 561 |||| ||||||||||||||||||| Sbjct: 18282 catactgtggataatccatggtac 18259
>emb|CT010408.3| Pan troglodytes chromosome X BAC RP43-014H14, complete sequence Length = 172332 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 521 acgttttcatatagtaacataatg 544 |||||||||||||||| ||||||| Sbjct: 53130 acgttttcatatagtaccataatg 53107
>dbj|AB052883.1| Oryza sativa OsMST1 mRNA for monosaccharide transporter 1, complete cds Length = 1557 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gctcggcttcggcgtcggct 164 |||||||||||||||||||| Sbjct: 435 gctcggcttcggcgtcggct 454 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,260,373 Number of Sequences: 3902068 Number of extensions: 4260373 Number of successful extensions: 83311 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82296 Number of HSP's gapped (non-prelim): 1011 length of query: 587 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 564 effective length of database: 17,143,297,704 effective search space: 9668819905056 effective search space used: 9668819905056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)