ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baali19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 1114 bits (562), Expect = 0.0 Identities = 606/614 (98%), Gaps = 5/614 (0%) Strand = Plus / Plus Query: 1 taccatggcaagnagctcca-ggccaacaggttcacagtcatggcagcggagnaacatcg 59 |||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 241 taccatggcaag-agctccaaggccaacaggttcacagtcatggcagcggag-aacatcg 298 Query: 60 acgagnaagaggaacaccgacaagtggaagggtcttgcgtacgatatctccgacgaccag 119 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 299 acgag-aagaggaacaccgacaagtggaagggtcttgctaccgatatctccgacgaccag 357 Query: 120 caggacatcaccagnagggaagggcatcgtggactcgctcttccaggcgcccacgggcga 179 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 caggacatcaccag-agggaagggcatcgtggactcgctcttccaggcgcccacgggcga 416 Query: 180 cggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagta 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 cggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagta 476 Query: 240 cgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 cgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgt 536 Query: 300 tgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttggg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 tgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttggg 596 Query: 360 tatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagat 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 tatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagat 656 Query: 420 gggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagcc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 gggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagcc 716 Query: 480 agccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagat 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 agccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagat 776 Query: 540 gtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgca 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 gtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgca 836 Query: 600 gtacaccgtcaaca 613 |||||||||||||| Sbjct: 837 gtacaccgtcaaca 850
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 1106 bits (558), Expect = 0.0 Identities = 588/594 (98%), Gaps = 3/594 (0%) Strand = Plus / Plus Query: 20 aggccaacaggttcacagtcatggcagcggagnaacatcgacgagnaagaggaacaccga 79 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 5 aggccaacaggttcacagtcatggcagcggag-aacatcgacgag-aagaggaacaccga 62 Query: 80 caagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnaggga 139 |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 63 caagtggaagggtcttgctaccgatatctccgacgaccagcaggacatcaccag-aggga 121 Query: 140 agggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcc 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 agggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcc 181 Query: 200 tcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgg 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 tcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgg 241 Query: 260 gaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaact 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaact 301 Query: 320 tcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtc 361 Query: 380 aaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatga 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 aaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatga 421 Query: 440 tgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagc 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 tgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagc 481 Query: 500 ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 541 Query: 560 atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 595
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 997 bits (503), Expect = 0.0 Identities = 591/614 (96%), Gaps = 5/614 (0%) Strand = Plus / Plus Query: 1 taccatggcaagnagctcca-ggccaacaggttcacagtcatggcagcggagnaacatcg 59 |||||||||||| ||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 161 taccatggcaag-agctccaaggccaacaggttcacggtcatggcagcgga-aaacatcg 218 Query: 60 acgagnaagaggaacaccgacaagtggaagggtcttgcgtacgatatctccgacgaccag 119 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 acgag-aagaggaacaccgacaagtggaagggtcttgcgtacgatatctccgacgaccag 277 Query: 120 caggacatcaccagnagggaagggcatcgtggactcgctcttccaggcgcccacgggcga 179 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 278 caggacatcaccag-agggaagggcatcgtggactccctcttccaggcgcccactggcga 336 Query: 180 cggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagta 239 ||||||||||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 337 cggcacccacgaggccgtcctcagctcatacgagtacgtcagccagggactcaagaagta 396 Query: 240 cgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 cgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgt 456 Query: 300 tgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttggg 359 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 tgtccatctctccaagaacttcatgaccctgcccaacatcaagatcccactcatcttggg 516 Query: 360 tatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagat 419 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 517 tatctggggaggcaagggtcaaggaaaatccttccagtgtgagcttgtcttcgccaagat 576 Query: 420 gggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagcc 479 |||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 577 gggcatcaacccaatcatgatgagtgccggagagctggagagtggcaacgccggagagcc 636 Query: 480 agccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagat 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 agccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagat 696 Query: 540 gtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgca 599 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 697 gtgctgcctcttcatcaacgatcttgacgccggtgcgggtaggatgggcgggaccacaca 756 Query: 600 gtacaccgtcaaca 613 |||||||||||||| Sbjct: 757 gtacaccgtcaaca 770
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 739 bits (373), Expect = 0.0 Identities = 496/536 (92%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||||||||||||| || || ||||||||||||||||||||||||||||||||||| || Sbjct: 257 gacaagtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccagg-gg 315 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 ||||| ||||| ||||| || ||||||||||||| |||||| ||||||||||||||||| Sbjct: 316 taagggtatcgtcgactccctgttccaggcgcccatgggcgatggcacccacgaggccgt 375 Query: 198 cctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccat 257 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 376 cctcagctcctacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccat 435 Query: 258 gggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaa 317 |||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| || Sbjct: 436 gggaggcttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaa 495 Query: 318 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 496 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaaggg 555 Query: 378 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 437 ||| || ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 556 tcaggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcat 615 Query: 438 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 497 |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 616 gatgagtgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggca 675 Query: 498 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 557 ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 676 gcggtaccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaa 735 Query: 558 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 ||| || ||||| || |||||| |||||||||| ||||| ||||||||||| |||| Sbjct: 736 cgacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgtgaaca 791 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 aggccaacaggttcacagtcatggc 44 |||||||||||||||| |||||||| Sbjct: 198 aggccaacaggttcaccgtcatggc 222
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 720 bits (363), Expect = 0.0 Identities = 493/536 (91%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||||||||||||| || || ||||||||||||||||||||||||||||||||||| || Sbjct: 247 gacaagtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccagg-gg 305 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 ||||| ||||| ||||| | ||||||||||||| |||||| || |||||||||||||| Sbjct: 306 taagggtatcgtcgactccttgttccaggcgcccatgggcgatggnacccacgaggccgt 365 Query: 198 cctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccat 257 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 366 cctcagctcntacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccat 425 Query: 258 gggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaa 317 |||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| || Sbjct: 426 gggaggcttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaa 485 Query: 318 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 486 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaaggg 545 Query: 378 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 437 ||| || ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 546 tcaggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcat 605 Query: 438 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 497 |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 606 gatgagtgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggca 665 Query: 498 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 557 ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 666 gcggtaccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaa 725 Query: 558 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 ||| || ||||| || |||||| |||||||||| ||||| ||||||||||| |||| Sbjct: 726 cgacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgtgaaca 781 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 aggccaacaggttcacagtcatggc 44 |||||||||||||||| |||||||| Sbjct: 188 aggccaacaggttcaccgtcatggc 212
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 620 bits (313), Expect = e-174 Identities = 475/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct: 204 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagg-gg 262 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 263 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 322 Query: 198 cctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccat 257 ||||||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 323 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 382 Query: 258 gggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaa 317 |||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| || Sbjct: 383 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 442 Query: 318 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 377 |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 443 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 502 Query: 378 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 437 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 503 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 562 Query: 438 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 497 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 563 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 622 Query: 498 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 557 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 623 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 682 Query: 558 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 683 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 730
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 620 bits (313), Expect = e-174 Identities = 475/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct: 241 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagg-gg 299 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 300 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 359 Query: 198 cctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccat 257 ||||||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 360 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 419 Query: 258 gggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaa 317 |||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| || Sbjct: 420 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 479 Query: 318 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 377 |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 480 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 539 Query: 378 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 437 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 540 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 599 Query: 438 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 497 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 600 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 659 Query: 498 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 557 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 660 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 719 Query: 558 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 720 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 767
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 620 bits (313), Expect = e-174 Identities = 475/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct: 240 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagg-gg 298 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 299 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 358 Query: 198 cctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccat 257 ||||||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 359 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 418 Query: 258 gggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaa 317 |||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| || Sbjct: 419 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 478 Query: 318 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 377 |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 479 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 538 Query: 378 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 437 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 539 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 598 Query: 438 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 497 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 599 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 658 Query: 498 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 557 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 659 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 718 Query: 558 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 719 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 766
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 620 bits (313), Expect = e-174 Identities = 475/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct: 24 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagg-gg 82 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 83 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 142 Query: 198 cctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccat 257 ||||||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 143 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 202 Query: 258 gggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaa 317 |||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| || Sbjct: 203 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 262 Query: 318 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 377 |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 263 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 322 Query: 378 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 437 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 323 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 382 Query: 438 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 497 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 383 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 442 Query: 498 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 557 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 443 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 502 Query: 558 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 503 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 550
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 620 bits (313), Expect = e-174 Identities = 475/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct: 245 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagg-gg 303 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 304 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 363 Query: 198 cctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccat 257 ||||||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 364 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 423 Query: 258 gggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaa 317 |||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| || Sbjct: 424 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 483 Query: 318 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 377 |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 484 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 543 Query: 378 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 437 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 544 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 603 Query: 438 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 497 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 604 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 663 Query: 498 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 557 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 664 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 723 Query: 558 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 724 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 771
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 620 bits (313), Expect = e-174 Identities = 475/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct: 239 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagg-gg 297 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 298 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 357 Query: 198 cctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccat 257 ||||||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 358 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 417 Query: 258 gggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaa 317 |||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| || Sbjct: 418 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 477 Query: 318 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 377 |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 478 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 537 Query: 378 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 437 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 538 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 597 Query: 438 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 497 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 598 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 657 Query: 498 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 557 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 658 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 717 Query: 558 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 718 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 765
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 613 bits (309), Expect = e-172 Identities = 474/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct: 252 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagg-gg 310 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 311 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 370 Query: 198 cctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccat 257 ||||||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 371 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 430 Query: 258 gggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaa 317 |||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| || Sbjct: 431 gggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaa 490 Query: 318 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 377 |||||||||||| |||||||||||| ||||||||| | |||||||||||||||||||||| Sbjct: 491 cttcatgaccctccccaacatcaaggtcccactcaccctgggtatctggggaggcaaggg 550 Query: 378 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 437 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 551 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 610 Query: 438 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 497 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 611 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 670 Query: 498 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 557 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 671 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 730 Query: 558 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 731 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 778
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 601 bits (303), Expect = e-168 Identities = 473/528 (89%), Gaps = 4/528 (0%) Strand = Plus / Plus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct: 212 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagg-gg 270 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 271 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 330 Query: 198 cctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccat 257 ||||||||||||||||||| |||||||||| || | | ||||||||||||||||||||| Sbjct: 331 cctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccat 390 Query: 258 gggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaa 317 |||||||||||||||||| ||| |||||||||||||||| || ||||| ||||||| || Sbjct: 391 gggaggcttctacatcgccccttctttcatggacaagctcgtcgtccacatctccaagaa 450 Query: 318 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 377 |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 451 cttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaaggg 510 Query: 378 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 437 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 511 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 570 Query: 438 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 497 |||||| ||||||||||||||||| || ||| |||||||| |||||||| |||||||| Sbjct: 571 gatgagcgccggagagctggagagcggcaac---ggagagccggccaagctgatcaggca 627 Query: 498 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 557 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 628 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 687 Query: 558 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 688 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 735
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 585 bits (295), Expect = e-164 Identities = 336/343 (97%), Gaps = 5/343 (1%) Strand = Plus / Plus Query: 1 taccatggcaagnagctcca-ggccaacaggttcacagtcatggcagcggagnaacatcg 59 |||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 5582 taccatggcaag-agctccaaggccaacaggttcacagtcatggcagcggag-aacatcg 5639 Query: 60 acgagnaagaggaacaccgacaagtggaagggtcttgcgtacgatatctccgacgaccag 119 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5640 acgag-aagaggaacaccgacaagtggaagggtcttgcgtacgatatctccgacgaccag 5698 Query: 120 caggacatcaccagnagggaagggcatcgtggactcgctcttccaggcgcccacgggcga 179 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct: 5699 caggacatcaccag-agggaagggcatcgtggactcgctcttccaggcgcccacggggca 5757 Query: 180 cggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagta 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5758 cggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcggaagta 5817 Query: 240 cgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5818 cgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgt 5877 Query: 300 tgtccatctctccaaaaacttcatgaccctgcccaacatcaag 342 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5878 tgtccatctctccaaaaacttcatgaccctgcccaacatcaag 5920 Score = 488 bits (246), Expect = e-134 Identities = 455/523 (86%), Gaps = 4/523 (0%) Strand = Plus / Plus Query: 83 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagggaagg 142 |||||||||||| || ||||| ||||| |||||||||||||||||||| | ||||| | Sbjct: 2939 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgg-gggaaag 2997 Query: 143 gcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctca 202 ||||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| | Sbjct: 2998 gcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaa 3057 Query: 203 gctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggag 262 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3058 gctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacg 3117 Query: 263 gcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttca 322 | | |||||||| || || |||||||||||||| | ||||| ||| |||| ||||||| Sbjct: 3118 ggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttca 3177 Query: 323 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 382 |||| || |||||||||||| | || |||||| |||||||||||||||||||||| || | Sbjct: 3178 tgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacagg 3237 Query: 383 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 442 | || || |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 3238 gcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatga 3297 Query: 443 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 502 | ||||| ||||||||||| || ||| || ||||| |||||||| ||| ||||| ||| Sbjct: 3298 gcgccggtgagctggagagcggcaac---ggcgagccggccaagctgatccggcagaggt 3354 Query: 503 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 562 |||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| | Sbjct: 3355 accgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacc 3414 Query: 563 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 | ||||| || ||||| |||||||||| || ||||||||||| Sbjct: 3415 tggacgccggcgcgggccggatgggcgggacgacgcagtacac 3457 Score = 367 bits (185), Expect = 3e-98 Identities = 185/185 (100%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6408 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 6467 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6468 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 6527 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6528 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 6587 Query: 609 caaca 613 ||||| Sbjct: 6588 caaca 6592 Score = 174 bits (88), Expect = 2e-40 Identities = 88/88 (100%) Strand = Plus / Plus Query: 341 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 6129 Query: 401 agcttgtgttcgccaagatgggcatcaa 428 |||||||||||||||||||||||||||| Sbjct: 6130 agcttgtgttcgccaagatgggcatcaa 6157
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 531 bits (268), Expect = e-148 Identities = 460/523 (87%), Gaps = 1/523 (0%) Strand = Plus / Plus Query: 83 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagggaagg 142 |||||||||||| || ||||| |||||||| ||||||||||||||||| || ||||| | Sbjct: 217 gtggaagggtctcgcttacgacatctccgatgaccagcaggacatcacgagg-gggaaag 275 Query: 143 gcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctca 202 ||||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| | Sbjct: 276 gcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctga 335 Query: 203 gctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggag 262 |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 336 gctcctacgagtacatcagccagggcctgcgcaagtacgacttcgacaacaccatggacg 395 Query: 263 gcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttca 322 | | |||||||| || || |||||||||||||| | ||||| ||| |||| ||||||| Sbjct: 396 ggctgtacatcgccccggcgttcatggacaagctcatcgtccacctcgccaagaacttca 455 Query: 323 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 382 |||| || |||||||||||| |||| |||||| |||||||||||||||||||||| || | Sbjct: 456 tgacactccccaacatcaaggtccctctcatcctgggtatctggggaggcaagggacagg 515 Query: 383 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 442 | || || |||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 516 gcaagtcgttccagtgcgagctggtgttcgccaagatgggcatcaaccccatcatgatga 575 Query: 443 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 502 | ||||||||||||||||| || ||||| || ||||| |||||||| ||| ||||| ||| Sbjct: 576 gcgccggagagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggt 635 Query: 503 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 562 |||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||| | Sbjct: 636 accgcgaggctgccgacattatcaagaagggcaagatgtgctgcctcttcatcaacgacc 695 Query: 563 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 | ||||| || ||||| |||||||||| || ||||||||||| Sbjct: 696 tggacgccggcgcggggcggatgggcgggacgacgcagtacac 738
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 498 bits (251), Expect = e-137 Identities = 365/403 (90%) Strand = Plus / Plus Query: 203 gctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggag 262 |||||||||||||| |||||||||| || | | |||||||||||||||||||||||||| Sbjct: 327 gctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatgggag 386 Query: 263 gcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttca 322 ||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||||||| Sbjct: 387 gcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaacttca 446 Query: 323 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 382 ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| | Sbjct: 447 tgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtcagg 506 Query: 383 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 442 ||||||| |||||||||||||| || |||||||||||||| ||||||||||||||||||| Sbjct: 507 gaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgatga 566 Query: 443 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 502 | ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||||||| Sbjct: 567 gcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggt 626 Query: 503 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 562 |||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 627 accgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatc 686 Query: 563 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 | ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 687 tggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 729 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/90 (86%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct: 240 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagg-gg 298 Query: 138 gaagggcatcgtggactcgctcttccaggc 167 |||||| |||| ||||| || |||||||| Sbjct: 299 gaagggtttcgtcgactcccttttccaggc 328
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 488 bits (246), Expect = e-134 Identities = 455/523 (86%), Gaps = 4/523 (0%) Strand = Plus / Plus Query: 83 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagggaagg 142 |||||||||||| || ||||| ||||| |||||||||||||||||||| | ||||| | Sbjct: 370 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgg-gggaaag 428 Query: 143 gcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctca 202 ||||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| | Sbjct: 429 gcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaa 488 Query: 203 gctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggag 262 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct: 489 gctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacg 548 Query: 263 gcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttca 322 | | |||||||| || || |||||||||||||| | ||||| ||| |||| ||||||| Sbjct: 549 ggctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttca 608 Query: 323 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 382 |||| || |||||||||||| | || |||||| |||||||||||||||||||||| || | Sbjct: 609 tgacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacagg 668 Query: 383 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 442 | || || |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 669 gcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatga 728 Query: 443 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 502 | ||||| ||||||||||| || ||| || ||||| |||||||| ||| ||||| ||| Sbjct: 729 gcgccggtgagctggagagcggcaac---ggcgagccggccaagctgatccggcagaggt 785 Query: 503 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 562 |||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| | Sbjct: 786 accgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacc 845 Query: 563 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 | ||||| || ||||| |||||||||| || ||||||||||| Sbjct: 846 tggacgccggcgcgggccggatgggcgggacgacgcagtacac 888
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 414 bits (209), Expect = e-112 Identities = 428/500 (85%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 114 gaccagcaggacatcaccagnagggaagggcatcgtggactcgctcttccaggcgcccac 173 |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| Sbjct: 235 gaccagcaggacatcaccagg-gggaagggcatggtcgactccctgttccaggctcccat 293 Query: 174 gggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcg 233 ||||||||| |||||| | ||||||| ||||||||||||||| ||||| || || || Sbjct: 294 gggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccg 353 Query: 234 gaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaa 293 || | |||| ||||||||| || || || ||||||||||| || ||||||||||| Sbjct: 354 ctcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaa 413 Query: 294 gcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcat 353 |||||| || || || |||| |||||||||| | |||||||||||||||| || ||||| Sbjct: 414 gcttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcat 473 Query: 354 cttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgc 413 |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 474 tttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgc 533 Query: 414 caagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgg 473 ||||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| || Sbjct: 534 caagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgg 593 Query: 474 agagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaaggg 533 |||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| Sbjct: 594 agagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaaggg 653 Query: 534 taagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaac 593 ||||||||||||||||||||||||||||| || || ||||| || |||||||||| || Sbjct: 654 gaagatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcac 713 Query: 594 cacgcagtacaccgtcaaca 613 ||| |||||||||||||||| Sbjct: 714 cacccagtacaccgtcaaca 733
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 414 bits (209), Expect = e-112 Identities = 428/500 (85%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 114 gaccagcaggacatcaccagnagggaagggcatcgtggactcgctcttccaggcgcccac 173 |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| Sbjct: 98 gaccagcaggacatcaccagg-gggaagggcatggtcgactccctgttccaggctcccat 156 Query: 174 gggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcg 233 ||||||||| |||||| | ||||||| ||||||||||||||| ||||| || || || Sbjct: 157 gggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccg 216 Query: 234 gaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaa 293 || | |||| ||||||||| || || || ||||||||||| || ||||||||||| Sbjct: 217 ctcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaa 276 Query: 294 gcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcat 353 |||||| || || || |||| |||||||||| | |||||||||||||||| || ||||| Sbjct: 277 gcttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcat 336 Query: 354 cttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgc 413 |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 337 tttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgc 396 Query: 414 caagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgg 473 ||||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| || Sbjct: 397 caagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgg 456 Query: 474 agagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaaggg 533 |||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| Sbjct: 457 agagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaaggg 516 Query: 534 taagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaac 593 ||||||||||||||||||||||||||||| || || ||||| || |||||||||| || Sbjct: 517 gaagatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcac 576 Query: 594 cacgcagtacaccgtcaaca 613 ||| |||||||||||||||| Sbjct: 577 cacccagtacaccgtcaaca 596
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 406 bits (205), Expect = e-110 Identities = 427/500 (85%), Gaps = 1/500 (0%) Strand = Plus / Plus Query: 114 gaccagcaggacatcaccagnagggaagggcatcgtggactcgctcttccaggcgcccac 173 |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| Sbjct: 128 gaccagcaggacatcaccagg-gggaagggcatggtcgactccctgttccaggctcccat 186 Query: 174 gggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcg 233 ||||||||| |||||| | ||||||| ||||||||||||||| ||||| || || || Sbjct: 187 gggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccg 246 Query: 234 gaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaa 293 || | |||| ||||||||| || || || ||||||||||| || ||||||||||| Sbjct: 247 ctcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaa 306 Query: 294 gcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcat 353 |||||| || || || |||| |||||||||| | |||||||||||||||| || ||||| Sbjct: 307 gcttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcat 366 Query: 354 cttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgc 413 |||||||||||||||||||| ||||| || ||||| ||||| ||||| ||||||||||| Sbjct: 367 tttgggtatctggggaggcaaaggtcaggggaaatccttccaatgtgaacttgtgttcgc 426 Query: 414 caagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgg 473 ||||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| || Sbjct: 427 caagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgg 486 Query: 474 agagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaaggg 533 |||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| Sbjct: 487 agagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaaggg 546 Query: 534 taagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaac 593 ||||||||||||||||||||||||||||| || || ||||| || |||||||||| || Sbjct: 547 gaagatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcac 606 Query: 594 cacgcagtacaccgtcaaca 613 ||| |||||||||||||||| Sbjct: 607 cacccagtacaccgtcaaca 626
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 391 bits (197), Expect = e-105 Identities = 446/528 (84%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| ||||||||| || || ||||| ||||| ||||||||||||||||||||||| || Sbjct: 213 gacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccagg-gg 271 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||| |||||||||||||| | ||| ||||||||||||| ||||| Sbjct: 272 caagggcctcgtcgacaacctcttccaggcgcctatgggggacggcacccacgtcgccgt 331 Query: 198 cctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccat 257 |||||||||||||| ||| |||||||||||| | ||| |||||||||||| || Sbjct: 332 gctcagctcctacgactacatcagccagggccaaaagtcttacaacttcgacaacatgat 391 Query: 258 gggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaa 317 || ||||||||||| || | |||||||||||||| || ||||| |||||||| || Sbjct: 392 ggatggcttctacatagccaagggcttcatggacaagctcgtcgtccacctctccaagaa 451 Query: 318 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 377 ||||||||||||||| ||||||||| | || |||||| ||||||||||||||||||| || Sbjct: 452 cttcatgaccctgccaaacatcaaggttcccctcatcctgggtatctggggaggcaaagg 511 Query: 378 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 437 || |||||||| ||||| || ||||| || ||||||||||||||||||| ||||||||| Sbjct: 512 ccagggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcacccccatcat 571 Query: 438 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 497 |||||| ||||| ||||||||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 572 gatgagcgccggcgagctggagagcggcaacgccggagagcccgccaagctcatcaggca 631 Query: 498 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 557 ||| ||||||||||| | ||| | ||||||||||| ||||||| ||||||||||||||| Sbjct: 632 gcgctaccgtgaggcctccgacctcatcaagaagggcaagatgtcctgcctcttcatcaa 691 Query: 558 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 ||| | ||||| || |||||| | |||||||| ||||| |||||||| Sbjct: 692 cgacttggacgccggcgcgggtcgcatgggcggcaccacccagtacac 739
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 353 bits (178), Expect = 4e-94 Identities = 304/346 (87%) Strand = Plus / Plus Query: 268 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 327 ||||||||||| || ||||||||||||||||| || || || |||| |||||||||| | Sbjct: 87 tacatcgctccggccttcatggacaagcttgtcgttcacatcaccaagaacttcatgaac 146 Query: 328 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 387 |||||||||||||||| || ||||| |||||||||||||||||||| ||||| || ||| Sbjct: 147 ttgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaggggaaa 206 Query: 388 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 447 || ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 207 tccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgcc 266 Query: 448 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 507 || ||||||||||| || ||||| |||||||| || ||||| ||| |||||||||||||| Sbjct: 267 ggtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgt 326 Query: 508 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 567 ||||| || ||||| |||| |||||| ||||||||||||||||||||||||||||| || Sbjct: 327 gaggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgat 386 Query: 568 gctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 || ||||| || |||||||||| ||||| |||||||||||||||| Sbjct: 387 gccggtgccggccggatgggcggcaccacccagtacaccgtcaaca 432
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 339 bits (171), Expect = 6e-90 Identities = 437/528 (82%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| ||||||||| || || ||||| ||||| ||||||||||||||||||||||| || Sbjct: 213 gacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccagg-gg 271 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||| |||||||||||||| | |||||||||||| ||||| Sbjct: 272 caagggcctcgtcgacaacctcttccaggcgcctatnnnnnacggcacccacgtcgccgt 331 Query: 198 cctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccat 257 |||||||||||||| ||| |||||||||||| | ||| |||||||||||| || Sbjct: 332 gctcagctcctacgactacatcagccagggccaaaagtcttacaacttcgacaacatgat 391 Query: 258 gggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaa 317 || ||||||||||| || | |||||||||||||| || ||||| |||||||| || Sbjct: 392 ggatggcttctacatagccaagggcttcatggacaagctcgtcgtccacctctccaagaa 451 Query: 318 cttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 377 ||||||||||||||| ||||||||| | || |||||| |||||||| ||||||||| || Sbjct: 452 cttcatgaccctgccaaacatcaaggttcccctcatcctgggtatcgtgggaggcaaagg 511 Query: 378 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 437 || |||||||| ||||| || ||||| || ||||||||||||||||||| ||||| Sbjct: 512 ccagggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcannnnnatcat 571 Query: 438 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 497 |||||| ||||| ||||||||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 572 gatgagcgccggcgagctggagagcggcaacgccggagagcccgccaagctcatcaggca 631 Query: 498 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 557 ||| ||||||||||| | ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 632 gcgctaccgtgaggcctccgacctcatcaagaagggcaagatgtgctgcctcttcatcaa 691 Query: 558 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 ||| | ||||| || |||||| | |||||||| ||||| |||||||| Sbjct: 692 cgacttggacgccggcgcgggtcgcatgggcggcaccacccagtacac 739
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 337 bits (170), Expect = 3e-89 Identities = 356/418 (85%) Strand = Plus / Plus Query: 196 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 255 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 496 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555 Query: 256 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 315 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 556 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615 Query: 316 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 375 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 616 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 675 Query: 376 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 435 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 676 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 735 Query: 436 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 495 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 736 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 795 Query: 496 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 555 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||||| Sbjct: 796 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 855 Query: 556 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 |||||||||||||||||||||||| | ||||| || || || |||||||| ||||||| Sbjct: 856 aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaaca 913
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 337 bits (170), Expect = 3e-89 Identities = 356/418 (85%) Strand = Plus / Plus Query: 196 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 255 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 496 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555 Query: 256 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 315 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 556 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615 Query: 316 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 375 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 616 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 675 Query: 376 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 435 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 676 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 735 Query: 436 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 495 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 736 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 795 Query: 496 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 555 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||||| Sbjct: 796 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 855 Query: 556 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 |||||||||||||||||||||||| | ||||| || || || |||||||| ||||||| Sbjct: 856 aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaaca 913
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 337 bits (170), Expect = 3e-89 Identities = 356/418 (85%) Strand = Plus / Plus Query: 196 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 255 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 525 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584 Query: 256 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 315 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 585 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644 Query: 316 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 375 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 645 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 704 Query: 376 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 435 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 705 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 764 Query: 436 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 495 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 765 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 824 Query: 496 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 555 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||||| Sbjct: 825 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 884 Query: 556 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 |||||||||||||||||||||||| | ||||| || || || |||||||| ||||||| Sbjct: 885 aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaaca 942
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 337 bits (170), Expect = 3e-89 Identities = 356/418 (85%) Strand = Plus / Plus Query: 196 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 255 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 407 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466 Query: 256 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 315 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 467 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526 Query: 316 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 375 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 527 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 586 Query: 376 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 435 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 587 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 646 Query: 436 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 495 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 647 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 706 Query: 496 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 555 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||||| Sbjct: 707 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 766 Query: 556 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 |||||||||||||||||||||||| | ||||| || || || |||||||| ||||||| Sbjct: 767 aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaaca 824
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 337 bits (170), Expect = 3e-89 Identities = 356/418 (85%) Strand = Plus / Plus Query: 196 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 255 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 410 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469 Query: 256 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 315 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 470 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529 Query: 316 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 375 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 530 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 589 Query: 376 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 435 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 590 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 649 Query: 436 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 495 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 650 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 709 Query: 496 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 555 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||||| Sbjct: 710 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 769 Query: 556 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 |||||||||||||||||||||||| | ||||| || || || |||||||| ||||||| Sbjct: 770 aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaaca 827
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 337 bits (170), Expect = 3e-89 Identities = 356/418 (85%) Strand = Plus / Plus Query: 196 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 255 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 399 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 458 Query: 256 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 315 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 459 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 518 Query: 316 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 375 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 519 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 578 Query: 376 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 435 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 579 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 638 Query: 436 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 495 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 639 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 698 Query: 496 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 555 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||||| Sbjct: 699 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 758 Query: 556 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 |||||||||||||||||||||||| | ||||| || || || |||||||| ||||||| Sbjct: 759 aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaaca 816
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 337 bits (170), Expect = 3e-89 Identities = 356/418 (85%) Strand = Plus / Plus Query: 196 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 255 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 407 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466 Query: 256 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 315 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 467 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526 Query: 316 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 375 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 527 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 586 Query: 376 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 435 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 587 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 646 Query: 436 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 495 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 647 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 706 Query: 496 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 555 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||||| Sbjct: 707 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 766 Query: 556 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 |||||||||||||||||||||||| | ||||| || || || |||||||| ||||||| Sbjct: 767 aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaaca 824
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 337 bits (170), Expect = 3e-89 Identities = 356/418 (85%) Strand = Plus / Plus Query: 196 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 255 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 410 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469 Query: 256 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 315 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 470 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529 Query: 316 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 375 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 530 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 589 Query: 376 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 435 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 590 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 649 Query: 436 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 495 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 650 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 709 Query: 496 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 555 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||||| Sbjct: 710 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 769 Query: 556 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 |||||||||||||||||||||||| | ||||| || || || |||||||| ||||||| Sbjct: 770 aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaaca 827
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 337 bits (170), Expect = 3e-89 Identities = 356/418 (85%) Strand = Plus / Plus Query: 196 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 255 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 525 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584 Query: 256 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 315 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 585 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644 Query: 316 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 375 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 645 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 704 Query: 376 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 435 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 705 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 764 Query: 436 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 495 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 765 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 824 Query: 496 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 555 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||||| Sbjct: 825 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 884 Query: 556 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 |||||||||||||||||||||||| | ||||| || || || |||||||| ||||||| Sbjct: 885 aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaaca 942
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 329 bits (166), Expect = 6e-87 Identities = 355/418 (84%) Strand = Plus / Plus Query: 196 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 255 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 322 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 381 Query: 256 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 315 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 382 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 441 Query: 316 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 375 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 442 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 501 Query: 376 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 435 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 502 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 561 Query: 436 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 495 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 562 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 621 Query: 496 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 555 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||| ||||| Sbjct: 622 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcctcatc 681 Query: 556 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 |||||||||||||||||||||||| | ||||| || || || |||||||| ||||||| Sbjct: 682 aacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaaca 739
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 321 bits (162), Expect = 2e-84 Identities = 433/522 (82%), Gaps = 1/522 (0%) Strand = Plus / Plus Query: 84 tggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagggaaggg 143 |||||||||||||| || ||||||||||| ||||| || ||||| ||||| |||||| || Sbjct: 280 tggaagggtcttgcttatgatatctccgatgaccaacaagacattaccag-agggaaagg 338 Query: 144 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 203 || || ||||| | ||||| || |||| | ||| || || ||| | || ||| | || Sbjct: 339 tatggtcgactcattgttccaagctcccatgaacgatggtactcactatgctgtcatgag 398 Query: 204 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 263 |||||| |||||| | ||||| ||||| || | |||||||| ||||||| ||||| || Sbjct: 399 ctcctatgagtacattagccaaggccttcgcacatacgacttggacaacaacatggatgg 458 Query: 264 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 323 |||||||| || || ||||||||||||||||||||||| || || |||| |||| ||| Sbjct: 459 attctacattgccccagctttcatggacaagcttgttgttcacatcaccaagaactacat 518 Query: 324 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 383 |||||| || ||||| ||| | || || ||||||||||| ||||||||||| |||||||| Sbjct: 519 gacccttcctaacattaaggttcctcttatcttgggtatttggggaggcaaaggtcaagg 578 Query: 384 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 443 |||||| ||||| ||||||||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 579 aaaatctttccaatgtgagcttgtctttgccaagatgggaatcaaccccattatgatgag 638 Query: 444 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 503 ||||||||| |||| ||||||||||| ||||| ||||||||| | |||||||| |||| Sbjct: 639 tgccggagaattggaaagtgggaacgccggagaaccagccaagttgatcaggcaaaggta 698 Query: 504 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 563 ||||||||| || ||||| |||||||| || || ||||| |||||||| ||||||||||| Sbjct: 699 ccgtgaggccgccgacattatcaagaaagggaaaatgtgttgcctctttatcaacgatct 758 Query: 564 tgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||| || ||| | ||||| |||||||| || ||||| Sbjct: 759 cgacgctggagccggtcgtatgggaggaaccacacaatacac 800
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 315 bits (159), Expect = 9e-83 Identities = 315/367 (85%) Strand = Plus / Plus Query: 247 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 306 ||||||| ||||| || |||||||| |||||||| |||||||||||||||||||| || Sbjct: 256 gacaacaacatggatggtttctacattgctcctgcattcatggacaagcttgttgttcac 315 Query: 307 ctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 366 || |||| ||||||||| |||| || ||||| ||| | || || ||||||||||| ||| Sbjct: 316 atcaccaagaacttcatgtccctccctaacattaaggttcctctaatcttgggtatttgg 375 Query: 367 ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 426 |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 376 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 435 Query: 427 aaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaag 486 |||||||||||||||||||||||||| ||||| ||||| ||||| || || ||||||||| Sbjct: 436 aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 495 Query: 487 ctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc 546 | |||||||| |||||||||| ||||| ||||| ||||| ||||| || |||||| | Sbjct: 496 ttgatcaggcaaaggtaccgtgaagctgccgacataatcaaaaagggcaaaatgtgcgcc 555 Query: 547 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 606 |||||||| |||||||| || |||||||| ||| | ||||| |||||||| || |||||| Sbjct: 556 ctcttcattaacgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacacc 615 Query: 607 gtcaaca 613 ||||||| Sbjct: 616 gtcaaca 622
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 315 bits (159), Expect = 9e-83 Identities = 282/323 (87%) Strand = Plus / Plus Query: 283 ttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaag 342 |||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 22 ttcatggacaagctcgtcgtccacctctccaagaacttcatgaccctgccaaacatcaag 81 Query: 343 atcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgag 402 | || |||||| ||||||||||||||||||| || || |||||||| ||||| || ||| Sbjct: 82 gttcccctcatcctgggtatctggggaggcaaaggccagggaaaatcgttccaatgcgag 141 Query: 403 cttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctggagagt 462 || || ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 142 ctggtcttcgccaagatgggcatcacccccatcatgatgagcgccggcgagctggagagc 201 Query: 463 gggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatg 522 || ||||| |||||||| |||||||||||||||||||| ||||||||||| | ||| | Sbjct: 202 ggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggcctccgacctc 261 Query: 523 atcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtagg 582 ||||||||||| ||||||| |||||||||||||||||| | ||||| || |||||| | Sbjct: 262 atcaagaagggcaagatgtcctgcctcttcatcaacgacttggacgccggcgcgggtcgc 321 Query: 583 atgggcggaaccacgcagtacac 605 |||||||| ||||| |||||||| Sbjct: 322 atgggcggcaccacccagtacac 344
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 305 bits (154), Expect = 9e-80 Identities = 307/358 (85%) Strand = Plus / Plus Query: 236 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 295 ||||| |||| ||||||| ||||| || |||||||| || || || ||||||||||||| Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490 Query: 296 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 355 |||| ||||| || |||| |||||| ||| || || ||||||||||| || || |||| Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550 Query: 356 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 415 ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || |||| Sbjct: 551 tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610 Query: 416 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 475 ||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || |||| Sbjct: 611 agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670 Query: 476 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 535 | || |||||||| |||||||| |||||||||| ||||| ||||| ||||||||||||| Sbjct: 671 aacctgccaagctgatcaggcaaaggtaccgtgaagctgctgacattatcaagaagggta 730 Query: 536 agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaac 593 | ||||||||||| |||||||||||||| |||||||| || ||| | ||||| ||||| Sbjct: 731 aaatgtgctgcctgttcatcaacgatctcgacgctggagctggtcgtatgggtggaac 788
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 285 bits (144), Expect = 8e-74 Identities = 355/420 (84%), Gaps = 4/420 (0%) Strand = Plus / Plus Query: 196 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 255 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 391 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 450 Query: 256 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 315 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 451 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 510 Query: 316 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatct-ggggaggcaa 374 |||||| |||| ||||| ||||||||| | ||||| || ||||| ||| |||||||||| Sbjct: 511 aacttcttgactctgcctaacatcaaggttccacttattttgggc-tctcggggaggcaa 569 Query: 375 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 434 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| || Sbjct: 570 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 629 Query: 435 catgatgagtgccggagagctggagagtgggaacgctggag-agccagccaagctcatca 493 |||||||||||| |||||||| |||||||| ||||| |||| || | | |||||| ||| Sbjct: 630 catgatgagtgctggagagcttgagagtggaaacgcaggagaagtccg-caagcttatcc 688 Query: 494 ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 553 | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||| Sbjct: 689 gtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttca 748 Query: 554 tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 |||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||| Sbjct: 749 tcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaaca 808
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 276 bits (139), Expect = 8e-71 Identities = 310/367 (84%) Strand = Plus / Plus Query: 247 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 306 ||||||| ||||| || ||||||||||||||||| |||||||||||||||||||| || Sbjct: 257 gacaacaacatggatggtttctacatcgctcctgcattcatggacaagcttgttgttcac 316 Query: 307 ctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 366 || ||| ||||||||| |||| || ||||| ||| | || || ||| ||||||| ||| Sbjct: 317 atcagcaagaacttcatgtccctccctaacattaaggttcctctaatcctgggtatttgg 376 Query: 367 ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 426 |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 377 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 436 Query: 427 aaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaag 486 |||||||||||||||||||||||||| ||||| ||||| ||||| || || ||||||||| Sbjct: 437 aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 496 Query: 487 ctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc 546 | |||||||| |||||||||| || || ||||| ||||| ||||| || |||||| | Sbjct: 497 ttgatcaggcaaaggtaccgtgaagccgccgacataatcaaaaagggcaaaatgtgcgcc 556 Query: 547 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 606 | ||||| || ||||| || |||||||| ||| | ||||| |||||||| || |||||| Sbjct: 557 ttgttcattaatgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacacc 616 Query: 607 gtcaaca 613 ||||||| Sbjct: 617 gtcaaca 623
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 274 bits (138), Expect = 3e-70 Identities = 273/318 (85%) Strand = Plus / Plus Query: 265 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 324 |||||||| ||||| |||||||||||||||||||| || || || |||||||||||||| Sbjct: 476 ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 535 Query: 325 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 384 || || |||||||| ||| | || ||||| ||||||||||||||||| || |||||||| Sbjct: 536 actctccccaacataaaggttcctctcattttgggtatctggggaggtaaaggtcaaggt 595 Query: 385 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 444 ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 596 aaatctttccagtgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 655 Query: 445 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 504 |||||||| ||||||| || ||||| |||||||| || ||| | |||||||| |||| Sbjct: 656 gccggagaattggagagcggcaacgcaggagagcccgcgaagttgatcaggcaacggtgt 715 Query: 505 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 564 |||||||| || ||||| ||||||||||| ||||||| ||||| || ||||| |||||| Sbjct: 716 cgtgaggcggccgacatcatcaagaagggaaagatgtcttgcctatttatcaatgatctt 775 Query: 565 gacgctggtgcgggtagg 582 || || ||||| |||||| Sbjct: 776 gatgcaggtgccggtagg 793
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 270 bits (136), Expect = 5e-69 Identities = 178/192 (92%) Strand = Plus / Minus Query: 237 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 296 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 109435 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 109376 Query: 297 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 356 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 109375 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 109316 Query: 357 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 416 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 109315 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 109256 Query: 417 gatgggcatcaa 428 |||||| ||||| Sbjct: 109255 gatggggatcaa 109244 Score = 208 bits (105), Expect = 2e-50 Identities = 159/177 (89%) Strand = Plus / Minus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 109158 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 109099 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 109098 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 109039 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 109038 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 108982 Score = 165 bits (83), Expect = 2e-37 Identities = 134/150 (89%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct: 109706 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagg-gg 109648 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 109647 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 109588 Query: 198 cctcagctcctacgagtacgtcagccaggg 227 ||||||||||||||||||| |||||||||| Sbjct: 109587 cctcagctcctacgagtacctcagccaggg 109558 Score = 113 bits (57), Expect = 7e-22 Identities = 99/112 (88%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 83 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagggaagg 142 ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 113205 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagg-gggaagg 113147 Query: 143 gcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 194 || |||| ||||| || |||||||| |||| ||| || |||||||||||||| Sbjct: 113146 gcctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 113095 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 472 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 531 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 112778 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 112719 Query: 532 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 569 || ||||||||| || ||||||||||| || ||||| Sbjct: 112718 gggaagatgtgcgtgctgttcatcaacgacctggacgc 112681 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 391 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 428 ||||||||||| || || |||||||||||||| ||||| Sbjct: 112906 ttccagtgtgatctcgtcttcgccaagatggggatcaa 112869
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 270 bits (136), Expect = 5e-69 Identities = 178/192 (92%) Strand = Plus / Minus Query: 237 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 296 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 31312 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 31253 Query: 297 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 356 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 31252 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 31193 Query: 357 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 416 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 31192 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 31133 Query: 417 gatgggcatcaa 428 |||||| ||||| Sbjct: 31132 gatggggatcaa 31121 Score = 208 bits (105), Expect = 2e-50 Identities = 159/177 (89%) Strand = Plus / Minus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 31035 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 30976 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 30975 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 30916 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 30915 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 30859 Score = 165 bits (83), Expect = 2e-37 Identities = 134/150 (89%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct: 31583 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagg-gg 31525 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 31524 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 31465 Query: 198 cctcagctcctacgagtacgtcagccaggg 227 ||||||||||||||||||| |||||||||| Sbjct: 31464 cctcagctcctacgagtacctcagccaggg 31435 Score = 113 bits (57), Expect = 7e-22 Identities = 99/112 (88%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 83 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagggaagg 142 ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 35082 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagg-gggaagg 35024 Query: 143 gcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 194 || |||| ||||| || |||||||| |||| ||| || |||||||||||||| Sbjct: 35023 gcctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 34972 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 472 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 531 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 34655 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 34596 Query: 532 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 569 || ||||||||| || ||||||||||| || ||||| Sbjct: 34595 gggaagatgtgcgtgctgttcatcaacgacctggacgc 34558 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 391 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 428 ||||||||||| || || |||||||||||||| ||||| Sbjct: 34783 ttccagtgtgatctcgtcttcgccaagatggggatcaa 34746
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 270 bits (136), Expect = 5e-69 Identities = 178/192 (92%) Strand = Plus / Minus Query: 237 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 296 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 28304574 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28304515 Query: 297 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 356 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 28304514 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28304455 Query: 357 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 416 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 28304454 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28304395 Query: 417 gatgggcatcaa 428 |||||| ||||| Sbjct: 28304394 gatggggatcaa 28304383 Score = 208 bits (105), Expect = 2e-50 Identities = 159/177 (89%) Strand = Plus / Minus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 28304297 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28304238 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 28304237 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28304178 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 28304177 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 28304121 Score = 165 bits (83), Expect = 2e-37 Identities = 134/150 (89%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct: 28304845 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagg-gg 28304787 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 28304786 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 28304727 Query: 198 cctcagctcctacgagtacgtcagccaggg 227 ||||||||||||||||||| |||||||||| Sbjct: 28304726 cctcagctcctacgagtacctcagccaggg 28304697 Score = 113 bits (57), Expect = 7e-22 Identities = 99/112 (88%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 83 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagggaagg 142 ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 28308344 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagg-gggaagg 28308286 Query: 143 gcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 194 || |||| ||||| || |||||||| |||| ||| || |||||||||||||| Sbjct: 28308285 gcctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28308234 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 472 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 531 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 28307917 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28307858 Query: 532 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 569 || ||||||||| || ||||||||||| || ||||| Sbjct: 28307857 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28307820 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 391 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 428 ||||||||||| || || |||||||||||||| ||||| Sbjct: 28308045 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28308008
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 270 bits (136), Expect = 5e-69 Identities = 178/192 (92%) Strand = Plus / Minus Query: 237 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 296 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 28287023 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28286964 Query: 297 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 356 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 28286963 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28286904 Query: 357 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 416 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 28286903 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28286844 Query: 417 gatgggcatcaa 428 |||||| ||||| Sbjct: 28286843 gatggggatcaa 28286832 Score = 208 bits (105), Expect = 2e-50 Identities = 159/177 (89%) Strand = Plus / Minus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 28286746 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28286687 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 28286686 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28286627 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 28286626 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 28286570 Score = 165 bits (83), Expect = 2e-37 Identities = 134/150 (89%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 78 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagg 137 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct: 28287294 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccagg-gg 28287236 Query: 138 gaagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgt 197 |||||| |||| ||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 28287235 gaagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgt 28287176 Query: 198 cctcagctcctacgagtacgtcagccaggg 227 ||||||||||||||||||| |||||||||| Sbjct: 28287175 cctcagctcctacgagtacctcagccaggg 28287146 Score = 113 bits (57), Expect = 7e-22 Identities = 99/112 (88%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 83 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagnagggaagg 142 ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 28290793 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagg-gggaagg 28290735 Query: 143 gcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 194 || |||| ||||| || |||||||| |||| ||| || |||||||||||||| Sbjct: 28290734 gcctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28290683 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 472 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 531 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 28290366 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28290307 Query: 532 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 569 || ||||||||| || ||||||||||| || ||||| Sbjct: 28290306 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28290269 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 391 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 428 ||||||||||| || || |||||||||||||| ||||| Sbjct: 28290494 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28290457
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 264 bits (133), Expect = 3e-67 Identities = 340/409 (83%) Strand = Plus / Plus Query: 205 tcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggc 264 |||||||| ||||||||||| || || || ||||| |||| ||||||| ||| || Sbjct: 396 tcctacgaatacgtcagccaaggtcttcgccagtacaacttggacaacaagttggacgga 455 Query: 265 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 324 |||||||||||||||||||||||||||||||||||||| || || |||| |||||| || Sbjct: 456 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttg 515 Query: 325 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 384 | |||||||||||||| | ||||| ||||||||||||||||||||||| |||||||| Sbjct: 516 aaattgcccaacatcaaggttccacttatcttgggtatctggggaggcaaaggtcaaggc 575 Query: 385 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 444 ||||||||||||||||| ||||| ||| |||||||| ||||||||||| ||||||||| Sbjct: 576 aaatcattccagtgtgaacttgtcttcagaaagatgggaatcaaccccattatgatgagt 635 Query: 445 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 504 || ||||| |||| ||||| || || ||||||||||||||| | || ||||| ||||| Sbjct: 636 gctggagaattggaaagtggaaatgcaggagagccagccaagttgattaggcaaaggtac 695 Query: 505 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 564 | || || ||||| || |||| ||||| || ||||| |||||||||||||||||||| Sbjct: 696 agagaagcagcagaaatcatcagaaagggaaatatgtgttgcctcttcatcaacgatctc 755 Query: 565 gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 || || || || ||||| ||||| ||||| || || ||||| ||||||| Sbjct: 756 gatgcaggagctggtagaatgggtggaactacccaatacactgtcaaca 804
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 254 bits (128), Expect = 3e-64 Identities = 278/328 (84%) Strand = Plus / Plus Query: 236 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 295 ||||| |||| ||||||| ||||| || |||||||| || || || ||||||||||||| Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490 Query: 296 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 355 |||| ||||| || |||| |||||| ||| || || ||||||||||| || || |||| Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550 Query: 356 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 415 ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || |||| Sbjct: 551 tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610 Query: 416 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 475 ||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || |||| Sbjct: 611 agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670 Query: 476 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 535 |||| || ||||| |||||||| |||| ||||| || || || || ||||||||||| | Sbjct: 671 agcccgcaaagctgatcaggcaaaggtatcgtgaagcagctgatatcatcaagaagggaa 730 Query: 536 agatgtgctgcctcttcatcaacgatct 563 | ||||||||||| || ||||||||||| Sbjct: 731 aaatgtgctgcctgtttatcaacgatct 758
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 244 bits (123), Expect = 3e-61 Identities = 257/299 (85%), Gaps = 2/299 (0%) Strand = Plus / Plus Query: 266 tctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatga 325 ||||||| || ||||| || ||||||||||||||||| || || |||| |||||| ||| Sbjct: 630 tctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttcttga 689 Query: 326 ccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaa 385 | |||||||||||||||| ||||||||||||||| | |||||||||||||||||||| | Sbjct: 690 acttgcccaacatcaagataccactcatcttgggtgtttggggaggcaagggtcaaggta 749 Query: 386 aatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtg 445 |||| ||||| ||||||||||||||||||||| | || || ||||||||||||||||||| Sbjct: 750 aatccttccaatgtgagcttgtgttcgccaagttaggaataaaccccatcatgatgagtg 809 Query: 446 ccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtacc 505 ||||||| |||| ||||| || || ||||||||||| ||| | |||||||| |||||| Sbjct: 810 ccggagaattggaaagtggaaatgcaggagagccagctaagttgatcaggcaaaggtacc 869 Query: 506 gtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatct 563 ||||||| |||||| |||| |||||||||||||| ||| || |||||||||||||| Sbjct: 870 gtgaggcagcagacttgattgctaagggtaagatgtg-tgctctattcatcaacgatct 927
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 236 bits (119), Expect = 7e-59 Identities = 295/351 (84%), Gaps = 2/351 (0%) Strand = Plus / Plus Query: 264 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 323 ||||||||| || ||| |||||||||||||| ||||||| || || |||| |||| | | Sbjct: 514 cttctacattgccccttctttcatggacaagattgttgttcacatcaccaagaactactt 573 Query: 324 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 383 || | |||| ||||||||| | || || ||||||||||| ||||||||||| |||||||| Sbjct: 574 gaacttgcctaacatcaaggttcccctgatcttgggtatttggggaggcaaaggtcaagg 633 Query: 384 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 443 ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 634 taaatccttccaatgtgagcttgtgttcgccaagatgggaatcaaccccatcatgatgag 693 Query: 444 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 503 ||| ||||| |||| ||||| ||||| ||||||||||| ||| | |||||||| |||| Sbjct: 694 tgcgggagaattggaaagtggaaacgcaggagagccagcaaagttgatcaggcaaaggta 753 Query: 504 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatc 562 ||||||||| |||||||| || ||||| |||||||| ||| || ||||||||||||| Sbjct: 754 ccgtgaggcagcagacataattgccaagggaaagatgtg-tgctctgttcatcaacgatc 812 Query: 563 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 | ||||| ||||| || | ||||| || ||||| || |||||||| |||| Sbjct: 813 tcgacgcgggtgctggacgtatgggaggcaccacacaatacaccgtgaaca 863
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 236 bits (119), Expect = 7e-59 Identities = 259/303 (85%), Gaps = 2/303 (0%) Strand = Plus / Plus Query: 265 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 324 |||||||| ||||||||||| |||||||||||||||| || || |||| ||||||||| Sbjct: 469 ttctacattgctcctgcttttctggacaagcttgttgttcacatcaccaagaacttcatg 528 Query: 325 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 384 ||| |||||||||||||| | || ||||| | |||||||||||||||||||| |||||| Sbjct: 529 accttgcccaacatcaaggttcctctcattcttggtatctggggaggcaagggacaagga 588 Query: 385 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 444 || || ||||| ||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 589 aagtctttccaatgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 648 Query: 445 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 504 || |||||| |||| ||||| || || ||||||||||| || | ||||||||| | ||| Sbjct: 649 gctggagagttggaaagtggaaatgccggagagccagcaaaattgatcaggcagagatac 708 Query: 505 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatct 563 ||||| |||||||| ||||| ||||| |||||||| ||| || |||||||||||||| Sbjct: 709 cgtgaagctgcagatttgatcgccaagggaaagatgtg-tgctctattcatcaacgatct 767 Query: 564 tga 566 ||| Sbjct: 768 tga 770 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 84 tggaagggtcttgcgtacgatatctccgacgaccagcaggacatcac 130 ||||||||||| || ||||||||||| || ||||| || |||||||| Sbjct: 295 tggaagggtctggcctacgatatctctgatgaccaacaagacatcac 341
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 222 bits (112), Expect = 1e-54 Identities = 292/352 (82%) Strand = Plus / Plus Query: 262 ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 321 ||||||||||| || ||||||||||||||||| |||||||| || || |||| |||||| Sbjct: 434 ggcttctacattgcccctgctttcatggacaaacttgttgttcacatcaccaagaacttc 493 Query: 322 atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 381 |||| |||||||||||||| | ||||||||||||||| | ||||||||||| |||||| Sbjct: 494 ttgacattgcccaacatcaaggttccactcatcttgggtgtatggggaggcaaaggtcaa 553 Query: 382 ggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatg 441 || ||||||||||| ||||||||||| ||| |||||||| ||||||||||| |||||| Sbjct: 554 ggtaaatcattccaatgtgagcttgtcttcagaaagatgggaatcaaccccattatgatg 613 Query: 442 agtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcgg 501 ||||| ||||| |||| ||||| || || ||||||||||| || | || ||||| || Sbjct: 614 agtgctggagaattggaaagtggaaatgcaggagagccagctaaattgattaggcaaagg 673 Query: 502 taccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgat 561 ||| | ||||| || || || |||| ||| || || ||||| || ||||||||||||||| Sbjct: 674 tacagagaggcagctgaaatcatcaggaaaggaaacatgtgttgtctcttcatcaacgat 733 Query: 562 cttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 || || || || || ||||| ||||| ||||| || || ||||||||||||| Sbjct: 734 ctcgatgcaggagctggtagaatgggtggaactacccaatacaccgtcaaca 785
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 220 bits (111), Expect = 4e-54 Identities = 258/307 (84%) Strand = Plus / Plus Query: 236 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 295 ||||| |||| ||||||| || || || |||||||| ||||| ||||| ||||||||| Sbjct: 436 agtacaactttgacaacatcaaggatggtttctacattgctccagcttttttggacaagc 495 Query: 296 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 355 ||||||| || || |||| |||||||||||| |||||||||||||| | || ||||| Sbjct: 496 ttgttgttcacatcgccaagaacttcatgaccttgcccaacatcaaggttcctctcattc 555 Query: 356 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 415 | ||| |||||||||||||||| ||||||||||| ||||| ||||||||||| || |||| Sbjct: 556 ttggtgtctggggaggcaagggacaaggaaaatctttccaatgtgagcttgtctttgcca 615 Query: 416 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 475 ||||||| ||||||||||||||||||||||| |||||| |||| ||||| || || |||| Sbjct: 616 agatgggaatcaaccccatcatgatgagtgctggagagttggaaagtggaaatgccggag 675 Query: 476 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 535 ||||||| || | || |||||| | |||||||| || ||||| | ||||||||||| | Sbjct: 676 agccagcaaaattgattaggcagagataccgtgaagcctcagacttaatcaagaagggaa 735 Query: 536 agatgtg 542 ||||||| Sbjct: 736 agatgtg 742
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 216 bits (109), Expect = 6e-53 Identities = 289/349 (82%) Strand = Plus / Plus Query: 265 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 324 |||||||||||||||||||||||||||||||||||||| || || |||| |||||| | Sbjct: 473 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttctta 532 Query: 325 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 384 || |||||||||||||| | ||||| || |||||| | |||||||| || |||||||| Sbjct: 533 acgttgcccaacatcaaggttccacttattttgggtgtttggggaggaaaaggtcaaggt 592 Query: 385 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 444 ||||||||||| ||||||||||| ||| |||||||| |||||||| || ||||||||| Sbjct: 593 aaatcattccaatgtgagcttgtcttcagaaagatgggaatcaacccaattatgatgagt 652 Query: 445 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 504 || ||||| | || ||||| || || ||||||||||| || | |||||||| ||||| Sbjct: 653 gctggagaattagaaagtggaaatgcaggagagccagctaaattgatcaggcaaaggtac 712 Query: 505 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 564 | ||||| || || || |||| |||||| || ||||| ||||||||||||||||||||| Sbjct: 713 agagaggccgcggaaatcatcaggaagggaaacatgtgttgcctcttcatcaacgatctt 772 Query: 565 gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 || || || || ||||| ||||| ||||| || || ||||| ||||||| Sbjct: 773 gatgcaggagccggtagaatgggtggaactacacaatacactgtcaaca 821
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 216 bits (109), Expect = 6e-53 Identities = 285/341 (83%), Gaps = 2/341 (0%) Strand = Plus / Plus Query: 274 gctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgccc 333 ||||| ||||| ||||||||||||||||| || || |||| |||||||||||||| || Sbjct: 485 gctcccgcttttatggacaagcttgttgttcacatcaccaagaacttcatgacccttcct 544 Query: 334 aacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattc 393 ||||| ||| | || |||||||||||||| ||||||||||| ||||| || || || ||| Sbjct: 545 aacatgaaggttcctctcatcttgggtatttggggaggcaaaggtcagggcaagtctttc 604 Query: 394 cagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagag 453 ||||| |||||||| || ||||||||| | |||| ||| |||||||||||||||||||| Sbjct: 605 cagtgcgagcttgtctttgccaagatgagaatcagccctatcatgatgagtgccggagaa 664 Query: 454 ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 513 |||| ||||| ||||| ||||| || || ||||| |||||||| |||||||||| || Sbjct: 665 ttggaaagtggaaacgcaggagaacccgcgaagctgatcaggcaaaggtaccgtgaagca 724 Query: 514 gcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgacgctgg 572 || ||||| |||| ||||||||| ||||| ||| |||||||||||||||||||| || || Sbjct: 725 gccgacattatcaggaagggtaaaatgtg-tgcactcttcatcaacgatcttgatgcagg 783 Query: 573 tgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 || ||| || | || |||||||| || ||||| ||||||| Sbjct: 784 agctggtcggcttggtggaaccacccaatacactgtcaaca 824 Score = 42.1 bits (21), Expect = 2.1 Identities = 52/61 (85%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 107 ctccgacgaccagcaggacatcaccagnagggaagggcatcgtggactcgctcttccagg 166 |||||||||||| || |||||||| || ||| ||||| | |||||||| |||||||||| Sbjct: 319 ctccgacgaccaacaagacatcacaag-aggaaagggtaaggtggactccctcttccagg 377 Query: 167 c 167 | Sbjct: 378 c 378
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 216 bits (109), Expect = 6e-53 Identities = 289/349 (82%) Strand = Plus / Plus Query: 265 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 324 ||||||||||||||| |||||||||||||||||||||| || || |||| |||||| || Sbjct: 426 ttctacatcgctccttctttcatggacaagcttgttgttcacatcaccaagaacttcttg 485 Query: 325 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 384 | |||||||||||||| | |||||||| |||||| ||||||||||||| |||||||| Sbjct: 486 aaattgcccaacatcaaggttccactcattttgggtgtctggggaggcaaaggtcaaggt 545 Query: 385 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 444 ||||| ||||||||||||||||| ||| |||||||| |||||||| || ||||||||| Sbjct: 546 aaatctttccagtgtgagcttgtcttcagaaagatgggaatcaaccctattatgatgagt 605 Query: 445 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 504 |||||||| |||| ||||| || || |||||||| || || | || ||||| ||||| Sbjct: 606 gccggagaattggaaagtggaaatgcaggagagcctgcaaaattgattaggcaaaggtac 665 Query: 505 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 564 | ||||| ||||| || |||| ||| || || || || |||||||||||||||||||| Sbjct: 666 agagaggcagcagaaatcatcaggaaaggaaacatctgttgcctcttcatcaacgatctc 725 Query: 565 gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 || || || || ||||| ||||| ||||| || || ||||| ||||||| Sbjct: 726 gatgcaggagctggtagaatgggtggaactacccaatacactgtcaaca 774
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 192 bits (97), Expect = 9e-46 Identities = 208/241 (86%), Gaps = 3/241 (1%) Strand = Plus / Plus Query: 373 aagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccc 432 ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||| || Sbjct: 1 aagggtcaaggaaaatctttccaatgtgaacttgtttttgccaagatgggaatcactcct 60 Query: 433 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 492 |||||||||||||||||||| | || ||||| ||||||| ||||||||| ||||||||| Sbjct: 61 atcatgatgagtgccggagaattagaaagtgg-aacgctg-agagccagctaagctcatc 118 Query: 493 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 552 || ||||| ||||||||||| || || || |||||||||||||| ||||||||| | ||| Sbjct: 119 agacagcg-taccgtgaggcagccgatatcatcaagaagggtaaaatgtgctgcttgttc 177 Query: 553 atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 612 |||||||||||||| |||||||| ||||| ||||| ||||| || || ||||| |||||| Sbjct: 178 atcaacgatcttgatgctggtgcaggtagaatgggaggaactacacaatacacagtcaac 237 Query: 613 a 613 | Sbjct: 238 a 238
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Minus Query: 433 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 492 |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| Sbjct: 14555 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 14496 Query: 493 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 552 | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||| Sbjct: 14495 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 14436 Query: 553 atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 612 ||||||||||||||||||||||||||| | ||||| || || || |||||||| |||||| Sbjct: 14435 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaac 14376 Query: 613 a 613 | Sbjct: 14375 a 14375 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 346 ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 405 ||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 14733 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 14674 Query: 406 gtgttcgccaagatgggcatcaa 428 || | ||||||||||| ||||| Sbjct: 14673 gtcatggccaagatgggtatcaa 14651 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 268 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 327 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 14910 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 14851 Query: 328 ctgcccaacatcaag 342 ||||| ||||||||| Sbjct: 14850 ctgcctaacatcaag 14836
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 168 bits (85), Expect = 1e-38 Identities = 157/181 (86%) Strand = Plus / Plus Query: 433 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 492 |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| Sbjct: 2728 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 2787 Query: 493 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 552 | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||| Sbjct: 2788 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 2847 Query: 553 atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 612 ||||||||||||||||||||||||||| | ||||| || || || |||||||| |||||| Sbjct: 2848 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaac 2907 Query: 613 a 613 | Sbjct: 2908 a 2908 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 346 ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 405 ||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 2550 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 2609 Query: 406 gtgttcgccaagatgggcatcaa 428 || | ||||||||||| ||||| Sbjct: 2610 gtcatggccaagatgggtatcaa 2632 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 268 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 327 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 2373 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 2432 Query: 328 ctgcccaacatcaag 342 ||||| ||||||||| Sbjct: 2433 ctgcctaacatcaag 2447
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 167 bits (84), Expect = 5e-38 Identities = 228/276 (82%) Strand = Plus / Plus Query: 267 ctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgac 326 |||||| ||||||||||| ||||||||||||||||| || |||| ||||||||||||| Sbjct: 156 ctacattgctcctgcttttatggacaagcttgttgttcacatctcgaaaaacttcatgaa 215 Query: 327 cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaa 386 | |||| ||||||||| | || ||||| | ||||| ||||||||||||||||||||||| Sbjct: 216 cttgcctaacatcaaggttcctctcattcttggtatttggggaggcaagggtcaaggaaa 275 Query: 387 atcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgc 446 || ||||| ||||||||||| || || || |||| |||||||| || ||||||||||| Sbjct: 276 gtccttccaatgtgagcttgtatttgcaaaattgggaatcaacccaattatgatgagtgc 335 Query: 447 cggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccg 506 ||| || ||||||||||| | || |||||||| || || | ||||| |||| ||||| Sbjct: 336 cggtgaactggagagtggagatgcaggagagcccgcaaaattgatcagaaagcgataccg 395 Query: 507 tgaggctgcagacatgatcaagaagggtaagatgtg 542 ||| || || ||||| ||||||| || |||||||| Sbjct: 396 tgaagcggccgacattgtcaagaaaggaaagatgtg 431
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 135 bits (68), Expect = 2e-28 Identities = 197/240 (82%) Strand = Plus / Plus Query: 374 agggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccca 433 |||| ||||||||||| ||||| ||||||||| || ||||||||||| |||||||||| Sbjct: 7 agggacaaggaaaatctttccaagctgagcttgtctttgccaagatgggaatcaacccca 66 Query: 434 tcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatca 493 ||||||||||||| |||||||| || ||||| || || ||||||||||| || | |||| Sbjct: 67 tcatgatgagtgctggagagcttgaaagtggaaatgcaggagagccagcaaaattgatca 126 Query: 494 ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 553 | ||| | |||||||| || | ||||| |||| ||| || |||||||| || || |||| Sbjct: 127 gacagagataccgtgaagcctctgacattatcaggaaaggaaagatgtgttgtctgttca 186 Query: 554 tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 |||||||||| || || || || ||| | ||||| |||||||| || ||||| ||||||| Sbjct: 187 tcaacgatctcgatgcaggagcaggtcgtatgggtggaaccacacaatacactgtcaaca 246
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 115 bits (58), Expect = 2e-22 Identities = 130/154 (84%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 |||||||||||||||||||||||| ||||||| || ||||| |||||||| || ||| | Sbjct: 467 ccccatcatgatgagtgccggagaattggagagcggcaacgcaggagagcccgcgaagtt 526 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 |||||||| |||| |||||||| || ||||| ||||||||||| ||||||| ||||| Sbjct: 527 gatcaggcaacggtgtcgtgaggcggccgacatcatcaagaagggaaagatgtcttgcct 586 Query: 549 cttcatcaacgatcttgacgctggtgcgggtagg 582 || ||||| |||||||| || ||||| |||||| Sbjct: 587 atttatcaatgatcttgatgcaggtgccggtagg 620 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 349 ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 408 ||||| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||| Sbjct: 186 ctcattttgggtatctggggaggtaaaggtcaaggtaaatctttccagtgtgagcttgtc 245 Query: 409 ttcgccaagatgggcatcaa 428 || ||||||||||| ||||| Sbjct: 246 tttgccaagatgggaatcaa 265 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 265 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 324 |||||||| ||||| |||||||||||||||||||| || || || |||||||||||||| Sbjct: 6 ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 65 Query: 325 ac 326 || Sbjct: 66 ac 67
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 113 bits (57), Expect = 7e-22 Identities = 132/157 (84%) Strand = Plus / Plus Query: 419 tgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagc 478 ||||||||| ||||||| | ||| |||||| ||||||||| ||| ||||| || |||| Sbjct: 1443 tgggcatcagccccatcgtcatgtctgccggtgagctggagtctggtaacgccggtgagc 1502 Query: 479 cagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaaga 538 | |||||||||||| | ||||| ||||| |||||| | |||| | |||||||| |||| Sbjct: 1503 ccgccaagctcatccgccagcgctaccgcgaggcttccgacagcgtgaagaagggcaaga 1562 Query: 539 tgtgctgcctcttcatcaacgatcttgacgctggtgc 575 |||||| |||||||||||||||||| ||||||||||| Sbjct: 1563 tgtgctccctcttcatcaacgatctggacgctggtgc 1599 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Plus Query: 262 ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 321 |||||||||||| ||||||||||| |||| ||| | ||||| | |||| |||||| Sbjct: 1128 ggcttctacatctctcctgctttcctggataagatgaccatccatgttgccaagaacttc 1187 Query: 322 atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 381 ||| ||||||||| |||||| | || |||||| ||||||||||||| |||||||| || Sbjct: 1188 atggacctgcccaagatcaaggttcccctcatcctgggtatctggggtggcaagggccag 1247 Query: 382 ggaaa 386 ||||| Sbjct: 1248 ggaaa 1252
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 105 bits (53), Expect = 2e-19 Identities = 146/177 (82%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 109 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 168 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| |||||| ||||||| |||||| Sbjct: 169 gatccgtcagcgctaccgtgaggccgcggacctgatctcgaagggcaagatgtcctgcct 228 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 229 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 285
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 105 bits (53), Expect = 2e-19 Identities = 146/177 (82%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 117 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 176 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| |||||| ||||||| |||||| Sbjct: 177 gatccgtcagcgctaccgtgaggcggcggacctgatctcgaagggcaagatgtcctgcct 236 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 237 gttcatcaacgatctggacgccggcgcaggccgcatgggcggcaccacccagtacac 293
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 341 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 400 |||| ||||||||||||||| | |||||||||||||||||||| ||||| ||||| |||| Sbjct: 2238 agataccactcatcttgggtgtttggggaggcaagggtcaaggtaaatccttccaatgtg 2297 Query: 401 agcttgtgttcgccaag 417 ||||||||||||||||| Sbjct: 2298 agcttgtgttcgccaag 2314 Score = 95.6 bits (48), Expect = 2e-16 Identities = 116/136 (85%), Gaps = 2/136 (1%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 |||||||||||||||||||||||| |||| ||||| || || ||||||||||| ||| | Sbjct: 2421 ccccatcatgatgagtgccggagaattggaaagtggaaatgcaggagagccagctaagtt 2480 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-c 547 |||||||| ||||||||||||| |||||| |||| |||||||||||||| ||| | Sbjct: 2481 gatcaggcaaaggtaccgtgaggcagcagacttgattgctaagggtaagatgtg-tgctc 2539 Query: 548 tcttcatcaacgatct 563 | |||||||||||||| Sbjct: 2540 tattcatcaacgatct 2555 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 264 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 323 ||||||||| || ||||| || ||||||||||||||||| || || |||| |||||| | Sbjct: 2067 cttctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttctt 2126 Query: 324 gaccctgcccaacatcaag 342 || | |||||||||||||| Sbjct: 2127 gaacttgcccaacatcaag 2145
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 105 bits (53), Expect = 2e-19 Identities = 206/257 (80%) Strand = Plus / Plus Query: 316 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 375 |||||| ||||||| || ||||| ||| | || ||||| ||||| | |||||||| || Sbjct: 522 aacttcttgaccctcccgaacattaaggttcctctcattctgggtgtttggggaggtaaa 581 Query: 376 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 435 ||||||||||| || ||||||||||| ||||| || || |||||||| |||||||| || Sbjct: 582 ggtcaaggaaagtctttccagtgtgaacttgtatttgctaagatgggaatcaaccctatt 641 Query: 436 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 495 ||||||||||| || || | || |||||||| || ||||||||||| || | |||||| Sbjct: 642 atgatgagtgctggggaattagaaagtgggaatgcaggagagccagcaaaattgatcagg 701 Query: 496 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 555 || | ||| | ||||| || || || |||||||| || || ||||| || || || ||| Sbjct: 702 caaagatacagagaggcagctgatatcatcaagaaagggaaaatgtgttgtctatttatc 761 Query: 556 aacgatcttgacgctgg 572 ||||||||||| ||||| Sbjct: 762 aacgatcttgatgctgg 778
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 247 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 303
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 299
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 249 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 305
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 299
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 299
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 247 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 303
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 429 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 488 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188 Query: 489 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 548 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248 Query: 549 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 605 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 249 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 305
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 83.8 bits (42), Expect = 6e-13 Identities = 144/178 (80%) Strand = Plus / Minus Query: 436 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 495 ||||||||||||||||| |||| ||||| || || |||||||| || ||| | || ||| Sbjct: 7262 atgatgagtgccggagaattggaaagtggaaatgcaggagagcctgcaaagttgattagg 7203 Query: 496 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 555 || ||||||||||||| | ||||| |||| || || ||||||||||| ||||||||| Sbjct: 7202 caaaggtaccgtgaggcgtccgacattatcagaaaaggaaagatgtgctgtctcttcatc 7143 Query: 556 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 613 || |||||||| || || || ||||| ||||| || || || || ||||| ||||||| Sbjct: 7142 aatgatcttgatgcaggagctggtagaatgggtggcactactcaatacacagtcaaca 7085 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 340 aagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgt 399 ||||| || ||||| ||||| || ||||||||||| ||||||||||| ||||| || ||| Sbjct: 7541 aagattcctctcatattgggcatttggggaggcaaaggtcaaggaaagtcatttcaatgt 7482 Query: 400 gagcttgtgttcgccaagatgggcatca 427 |||||||| || ||||||||||| |||| Sbjct: 7481 gagcttgtatttgccaagatgggaatca 7454
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 358 ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 417 |||||||||||||| || |||||||||||||| ||||| ||||||||| || |||||| Sbjct: 104933 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 104874 Query: 418 atgggcatcaa 428 ||||||||||| Sbjct: 104873 atgggcatcaa 104863 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Minus Query: 433 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 482 |||||||||||||| |||||||| || ||||| || || ||||| ||||| Sbjct: 104183 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 104134 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Minus Query: 538 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 597 ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || Sbjct: 104078 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 104019 Query: 598 cagtacac 605 |||||||| Sbjct: 104018 cagtacac 104011
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 358 ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 417 |||||||||||||| || |||||||||||||| ||||| ||||||||| || |||||| Sbjct: 83958 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 83899 Query: 418 atgggcatcaa 428 ||||||||||| Sbjct: 83898 atgggcatcaa 83888 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 247 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgt 302 ||||||||||||| || || ||||| || |||||||| ||||||||||||||||| Sbjct: 84295 gacaacaccatggatggtttttacattgcacctgcttttatggacaagcttgttgt 84240 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Minus Query: 433 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 482 |||||||||||||| |||||||| || ||||| || || ||||| ||||| Sbjct: 83208 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 83159 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Minus Query: 538 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 597 ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || Sbjct: 83103 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 83044 Query: 598 cagtacac 605 |||||||| Sbjct: 83043 cagtacac 83036
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 538 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 597 ||||| |||||||||||||||||||| || || || || ||||| ||||| ||||| || Sbjct: 55 atgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 114 Query: 598 cagtacaccgtcaaca 613 || ||||| ||||||| Sbjct: 115 caatacactgtcaaca 130
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 311 ccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggag 370 |||| ||||||||| ||||||||| |||||| | || ||||| ||||||||||||| | Sbjct: 406 ccaagaacttcatggacctgcccaagatcaaggtgcccctcattctgggtatctggggtg 465 Query: 371 gcaaggg 377 ||||||| Sbjct: 466 gcaaggg 472 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Plus Query: 517 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 576 ||||| ||||||||||| ||||||| || |||||||||||||| ||||| ||||| Sbjct: 612 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 671 Query: 577 ggtaggatgggcggaaccacgcagtacaccgtcaaca 613 || | ||||||| ||||| ||||||||||| |||| Sbjct: 672 ggccgcatgggcgacaccacccagtacaccgtgaaca 708
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Plus Query: 517 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 576 ||||| ||||||||||| ||||||| || |||||||||||||| ||||| ||||| Sbjct: 1824 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 1883 Query: 577 ggtaggatgggcggaaccacgcagtacaccgtcaaca 613 || | ||||||| ||||| ||||||||||| |||| Sbjct: 1884 ggccgcatgggcgacaccacccagtacaccgtgaaca 1920 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 327 cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 377 ||||||||| |||||| | || ||||| ||||||||||||| |||||||| Sbjct: 1634 cctgcccaagatcaaggtgcccctcattctgggtatctggggtggcaaggg 1684
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 ccgacgaccagcaggacatcacc 131 ||||||||||||||||||||||| Sbjct: 1452088 ccgacgaccagcaggacatcacc 1452066
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 152 actcgctcttccaggcgcccac 173 |||||||||||||||||||||| Sbjct: 2553524 actcgctcttccaggcgcccac 2553503
>gb|AE010322.1| Methanopyrus kandleri AV19 section 21 of 157 of the complete genome Length = 10732 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 atctccgacgaccagcaggacatc 128 |||||| ||||||||||||||||| Sbjct: 8676 atctcccacgaccagcaggacatc 8653
>ref|XM_520373.1| PREDICTED: Pan troglodytes LOC464867 (LOC464867), mRNA Length = 1685 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 cccacgggcgacggcacccacgag 192 ||||||||||||| |||||||||| Sbjct: 1369 cccacgggcgacgtcacccacgag 1392
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ccctgcccaacatcaagatc 345 |||||||||||||||||||| Sbjct: 1130357 ccctgcccaacatcaagatc 1130376
>ref|NM_017617.2| Homo sapiens Notch homolog 1, translocation-associated (Drosophila) (NOTCH1), mRNA Length = 9312 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 cccacgggcgacggcacccacgag 192 ||||||||||||| |||||||||| Sbjct: 703 cccacgggcgacgtcacccacgag 726
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 ttccagtgtgagcttgtgtt 410 |||||||||||||||||||| Sbjct: 97287 ttccagtgtgagcttgtgtt 97268
>gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, complete sequence Length = 193170 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ggcttctacatcgctcctgctttc 285 ||||||| |||||||||||||||| Sbjct: 147044 ggcttctgcatcgctcctgctttc 147067
>emb|AL592301.14| Human DNA sequence from clone RP11-413M3 on chromosome 9 Contains the 3' end of the gene for activator of G-protein signalling 3 (AGS3), two novel genes, the CARD9 gene for caspase recruitment domain family member 9, the SNAPC4 gene for a 190kDa small nuclear RNA activating complex polypeptide 4, the SDCCAG3 gene for serologically defined colon cancer antigen 3, the INPP5E gene for a 72kDa inositol polyphosphate-5-phosphatase, the gene for phosphatidylinositol polyphosphate 5-phosphatase type IV (PPI5PIV), a novel gene (KIAA0310), the 3' end of the NOTCH1 gene for Notch homolog 1 translocation-associated (Drosophila) and twenty CpG islands, complete sequence Length = 188462 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 cccacgggcgacggcacccacgag 192 ||||||||||||| |||||||||| Sbjct: 166513 cccacgggcgacgtcacccacgag 166490
>gb|AC108471.3| Homo sapiens BAC clone RP11-539G18 from 4, complete sequence Length = 141442 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gtccatctctccaaaaactt 320 |||||||||||||||||||| Sbjct: 63248 gtccatctctccaaaaactt 63229
>gb|AE009524.1| Brucella melitensis 16M chromosome I, section 81 of 195 of the complete sequence Length = 10900 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccctgcccaacatcaagatc 345 |||||||||||||||||||| Sbjct: 7760 ccctgcccaacatcaagatc 7741
>gb|AF308602.1|AF308602 Homo sapiens NOTCH 1 (N1) mRNA, complete cds Length = 7693 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 cccacgggcgacggcacccacgag 192 ||||||||||||| |||||||||| Sbjct: 703 cccacgggcgacgtcacccacgag 726
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 cgatatctccgacgaccagc 120 |||||||||||||||||||| Sbjct: 4182002 cgatatctccgacgaccagc 4181983
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ccctgcccaacatcaagatc 345 |||||||||||||||||||| Sbjct: 1147720 ccctgcccaacatcaagatc 1147739
>ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302 (ENSANGG00000011813), partial mRNA Length = 1773 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tcgccaagatgggcatcaac 429 |||||||||||||||||||| Sbjct: 641 tcgccaagatgggcatcaac 660
>emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chromosome 12, complete sequence Length = 219072 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ggcttctacatcgctcctgctttc 285 ||||||| |||||||||||||||| Sbjct: 141825 ggcttctgcatcgctcctgctttc 141848
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ccctgcccaacatcaagatc 345 |||||||||||||||||||| Sbjct: 1144872 ccctgcccaacatcaagatc 1144891
>gb|U51683.1|BAU51683 Brucella abortus phosphatidate cytidyltransferase (cdsA), group 1 outer membrane protein (omp1), LpxD (lpxD), FabZ (fabZ), and LpxA (lpxA) genes, complete cds Length = 8895 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccctgcccaacatcaagatc 345 |||||||||||||||||||| Sbjct: 8238 ccctgcccaacatcaagatc 8219
>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete sequence Length = 208153 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 tggagagtgggaacgctgga 474 |||||||||||||||||||| Sbjct: 90247 tggagagtgggaacgctgga 90228
>gb|M73980.1|HUMTAN1 Human TAN-1 mRNA (homologue of Drosophila Notch gene), 5' end Length = 7332 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 cccacgggcgacggcacccacgag 192 ||||||||||||| |||||||||| Sbjct: 703 cccacgggcgacgtcacccacgag 726 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,474,712 Number of Sequences: 3902068 Number of extensions: 4474712 Number of successful extensions: 78520 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78062 Number of HSP's gapped (non-prelim): 400 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
